View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1324_low_41 (Length: 228)
Name: NF1324_low_41
Description: NF1324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1324_low_41 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 6 - 228
Target Start/End: Complemental strand, 45550564 - 45550342
Alignment:
| Q |
6 |
actggacaaccttcctgagaagaaggtttctggtaattgtaatactgcatcatccaaacactctgccaaaggaagcagcagcaccacactgaagagcaaa |
105 |
Q |
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| T |
45550564 |
actggacaaccttcctgagaagaaggtttctggtaattgtaatactgcatcatccaaacactctgccaaaggaagcagcagcaccacactgaagagcaaa |
45550465 |
T |
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| Q |
106 |
caaacagacaatttgatcaaaaaccaaaaagtggctgttggatccttcaaaaccatgatgtttggtggtccagataaaaatttggtcctccaaaaccaaa |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45550464 |
caaacagacaatttgatcaaaaaccaaaaagtggctgttggatccttcaaaaccatgatgtttggtggtccagataaaaatttggtcctccaaaaccaaa |
45550365 |
T |
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| Q |
206 |
agtctgcctattactctgaatct |
228 |
Q |
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||||||||||||||||||||||| |
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| T |
45550364 |
agtctgcctattactctgaatct |
45550342 |
T |
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