View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13250_low_6 (Length: 270)
Name: NF13250_low_6
Description: NF13250
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13250_low_6 |
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Alignment Details
Target: chr3 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 17 - 262
Target Start/End: Complemental strand, 3760385 - 3760140
Alignment:
| Q |
17 |
agaaaaacgccacattgaaagaatggccaagaaaagagtttttgaaaaactgtcatcatattttcttggattggtgtttgatcaatgaacttcctgagag |
116 |
Q |
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| T |
3760385 |
agaaaaacgccacattgaaagaatggccaagaaaagagtttttgaaaaactgtcatcatattttcttggattggtgtttgatcaatgaacttcctgagag |
3760286 |
T |
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| Q |
117 |
gttagaatgtcccaacctgaagatactaaaactcaactctcaaggtaaccatttgaaaattcatgataatttctttgaccaaacgaaagaactaaaggta |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3760285 |
gttagaatgtcccaacctgaagatactaaaactcaactctcaaggtaaccatttgaaaattcatgataatttctttgaccaaacgaaagaactaaaggta |
3760186 |
T |
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| Q |
217 |
ctaagtttaggaggtgtgaattgtactccatcacttccttcatctc |
262 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3760185 |
ctaagtttaggaggtgtgaattgtactccatcacttccttcatctc |
3760140 |
T |
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