View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13252_low_5 (Length: 365)

Name: NF13252_low_5
Description: NF13252
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13252_low_5
NF13252_low_5
[»] chr7 (57 HSPs)
chr7 (120-345)||(30851990-30852218)
chr7 (53-194)||(30851677-30851818)
chr7 (77-188)||(27567731-27567843)
chr7 (1-45)||(17102376-17102420)
chr7 (1-43)||(6253827-6253869)
chr7 (1-43)||(6571012-6571054)
chr7 (1-43)||(17102019-17102061)
chr7 (1-43)||(27991738-27991780)
chr7 (1-43)||(32298776-32298818)
chr7 (1-45)||(5457294-5457338)
chr7 (1-41)||(6253472-6253512)
chr7 (1-45)||(27396982-27397026)
chr7 (1-45)||(45010991-45011035)
chr7 (1-44)||(28469395-28469438)
chr7 (1-43)||(19204488-19204530)
chr7 (105-182)||(20132051-20132129)
chr7 (1-43)||(22871664-22871706)
chr7 (1-43)||(24389172-24389214)
chr7 (1-39)||(27992095-27992133)
chr7 (1-43)||(28469009-28469051)
chr7 (77-159)||(40751696-40751778)
chr7 (1-42)||(18670250-18670291)
chr7 (108-184)||(21367165-21367242)
chr7 (1-45)||(28105498-28105542)
chr7 (1-41)||(32299092-32299132)
chr7 (1-45)||(48788800-48788844)
chr7 (1-44)||(42731806-42731849)
chr7 (1-43)||(2640177-2640219)
chr7 (1-43)||(10936181-10936223)
chr7 (105-182)||(11297755-11297833)
chr7 (1-43)||(29141563-29141605)
chr7 (1-42)||(10935794-10935835)
chr7 (1-42)||(13386134-13386175)
chr7 (1-42)||(37657224-37657265)
chr7 (1-42)||(40380071-40380112)
chr7 (1-42)||(42362450-42362491)
chr7 (1-42)||(42731419-42731460)
chr7 (105-177)||(8894560-8894632)
chr7 (1-45)||(20426717-20426761)
chr7 (1-41)||(23181381-23181421)
chr7 (1-45)||(24388816-24388860)
chr7 (1-45)||(29144369-29144413)
chr7 (105-173)||(34471230-34471298)
chr7 (1-41)||(34799545-34799585)
chr7 (1-37)||(40379774-40379810)
chr7 (1-41)||(42019598-42019638)
chr7 (92-179)||(7379069-7379155)
chr7 (9-44)||(17886885-17886920)
chr7 (92-179)||(31740096-31740181)
chr7 (106-140)||(12925253-12925287)
chr7 (1-43)||(27396628-27396670)
chr7 (1-43)||(32053142-32053184)
chr7 (1-43)||(34793903-34793945)
chr7 (1-39)||(42019984-42020022)
chr7 (105-182)||(39596837-39596919)
chr7 (1-42)||(43123175-43123216)
chr7 (5-41)||(1960266-1960302)
[»] chr6 (39 HSPs)
chr6 (120-345)||(30465511-30465739)
chr6 (120-345)||(5644786-5645015)
chr6 (53-194)||(30465198-30465339)
chr6 (105-181)||(10311636-10311713)
chr6 (1-44)||(681115-681158)
chr6 (1-44)||(30337447-30337490)
chr6 (1-43)||(17734195-17734237)
chr6 (105-182)||(17957027-17957105)
chr6 (105-182)||(25042927-25043004)
chr6 (1-45)||(26463176-26463220)
chr6 (1-45)||(33647338-33647382)
chr6 (1-44)||(13379869-13379912)
chr6 (1-44)||(30726146-30726189)
chr6 (1-43)||(679865-679907)
chr6 (1-43)||(3059643-3059685)
chr6 (1-43)||(33517921-33517963)
chr6 (100-173)||(17158510-17158583)
chr6 (1-42)||(30337805-30337846)
chr6 (1-45)||(8090314-8090358)
chr6 (1-45)||(12081023-12081067)
chr6 (92-148)||(24672302-24672358)
chr6 (71-181)||(12611793-12611904)
chr6 (1-44)||(20651008-20651051)
chr6 (1-44)||(30804248-30804291)
chr6 (77-182)||(10516634-10516740)
chr6 (5-43)||(21628104-21628142)
chr6 (56-187)||(3807061-3807193)
chr6 (1-41)||(17734550-17734590)
chr6 (1-44)||(3059255-3059298)
chr6 (1-40)||(11434804-11434843)
chr6 (1-40)||(12080638-12080677)
chr6 (1-44)||(12408558-12408601)
chr6 (105-182)||(6197808-6197885)
chr6 (106-140)||(14896841-14896875)
chr6 (1-39)||(22617886-22617924)
chr6 (77-127)||(30039480-30039530)
chr6 (1-42)||(15115339-15115380)
chr6 (1-42)||(15116619-15116660)
chr6 (1-42)||(26464586-26464627)
[»] chr4 (79 HSPs)
chr4 (53-235)||(26081200-26081381)
chr4 (77-182)||(40390887-40390992)
chr4 (268-345)||(26081432-26081509)
chr4 (77-150)||(33609974-33610047)
chr4 (1-45)||(7451831-7451875)
chr4 (1-45)||(13058034-13058078)
chr4 (1-45)||(24711467-24711511)
chr4 (1-45)||(50419024-50419068)
chr4 (1-44)||(10781871-10781914)
chr4 (1-44)||(24349672-24349715)
chr4 (1-44)||(50418666-50418709)
chr4 (1-43)||(10780712-10780754)
chr4 (1-43)||(10974321-10974363)
chr4 (1-43)||(23613308-23613350)
chr4 (1-43)||(24350819-24350861)
chr4 (1-43)||(24711110-24711152)
chr4 (1-43)||(48528484-48528526)
chr4 (1-42)||(7452190-7452231)
chr4 (1-42)||(23613665-23613706)
chr4 (1-41)||(49879208-49879248)
chr4 (1-44)||(34765767-34765810)
chr4 (1-40)||(44967071-44967110)
chr4 (1-44)||(44967425-44967468)
chr4 (77-132)||(47472233-47472288)
chr4 (1-44)||(51692906-51692949)
chr4 (1-44)||(55867501-55867544)
chr4 (1-43)||(5368946-5368988)
chr4 (1-43)||(13058369-13058411)
chr4 (1-43)||(18831348-18831390)
chr4 (1-39)||(37248592-37248630)
chr4 (1-43)||(46661301-46661343)
chr4 (108-177)||(15025781-15025850)
chr4 (1-42)||(18831704-18831745)
chr4 (104-173)||(38377815-38377884)
chr4 (1-45)||(15508059-15508103)
chr4 (1-45)||(24411735-24411779)
chr4 (1-45)||(35027995-35028039)
chr4 (1-45)||(35508627-35508671)
chr4 (1-45)||(36008841-36008885)
chr4 (1-45)||(39539305-39539349)
chr4 (1-44)||(148142-148185)
chr4 (1-40)||(16006180-16006219)
chr4 (92-179)||(30801941-30802026)
chr4 (1-44)||(34765378-34765421)
chr4 (1-40)||(37248238-37248277)
chr4 (1-44)||(43155883-43155926)
chr4 (1-44)||(51692551-51692594)
chr4 (1-43)||(1179187-1179229)
chr4 (1-43)||(14801735-14801777)
chr4 (105-182)||(15882224-15882302)
chr4 (1-43)||(17355924-17355966)
chr4 (106-172)||(35574352-35574418)
chr4 (1-39)||(43155532-43155570)
chr4 (1-43)||(53129893-53129935)
chr4 (1-39)||(54086698-54086736)
chr4 (8-45)||(36009208-36009245)
chr4 (1-34)||(49879563-49879596)
chr4 (1-41)||(15507674-15507714)
chr4 (83-131)||(33894456-33894504)
chr4 (7-43)||(35028391-35028427)
chr4 (1-45)||(37976540-37976584)
chr4 (77-132)||(6156075-6156130)
chr4 (56-151)||(6449714-6449809)
chr4 (103-150)||(22593375-22593422)
chr4 (1-40)||(53701814-53701853)
chr4 (1-43)||(1178056-1178098)
chr4 (1-39)||(11108227-11108265)
chr4 (106-140)||(14806134-14806168)
chr4 (1-39)||(37976156-37976194)
chr4 (3-41)||(52909254-52909292)
chr4 (1-43)||(53129505-53129547)
chr4 (1-42)||(147319-147360)
chr4 (1-42)||(5369254-5369295)
chr4 (10-43)||(54713615-54713648)
chr4 (1-42)||(55866111-55866152)
chr4 (1-37)||(16005843-16005879)
chr4 (12-44)||(52909651-52909683)
chr4 (1-45)||(54087082-54087126)
chr4 (1-45)||(54435484-54435528)
[»] chr3 (44 HSPs)
chr3 (69-235)||(51471127-51471292)
chr3 (90-182)||(20336778-20336871)
chr3 (77-172)||(20314896-20314991)
chr3 (268-345)||(51470999-51471076)
chr3 (82-140)||(13899504-13899562)
chr3 (1-43)||(19741279-19741321)
chr3 (1-42)||(34142605-34142646)
chr3 (1-44)||(2796177-2796220)
chr3 (108-182)||(34359328-34359403)
chr3 (1-44)||(40033843-40033886)
chr3 (1-43)||(33689381-33689423)
chr3 (1-42)||(9294345-9294386)
chr3 (1-42)||(40758147-40758188)
chr3 (69-181)||(50334692-50334805)
chr3 (1-45)||(23458366-23458410)
chr3 (1-45)||(33689766-33689810)
chr3 (1-45)||(40758497-40758541)
chr3 (1-41)||(51994273-51994313)
chr3 (1-44)||(42342789-42342832)
chr3 (1-44)||(51993962-51994005)
chr3 (77-182)||(28769571-28769675)
chr3 (1-39)||(36150530-36150568)
chr3 (105-182)||(44446945-44447023)
chr3 (105-171)||(52423017-52423083)
chr3 (1-42)||(3850514-3850555)
chr3 (1-42)||(36418075-36418116)
chr3 (1-45)||(41558005-41558049)
chr3 (1-40)||(9292245-9292284)
chr3 (1-44)||(9367739-9367782)
chr3 (1-44)||(19740921-19740964)
chr3 (7-42)||(55052640-55052675)
chr3 (106-140)||(16607666-16607700)
chr3 (1-39)||(26463635-26463673)
chr3 (1-43)||(26463973-26464015)
chr3 (105-182)||(39340768-39340846)
chr3 (3-41)||(41989575-41989613)
chr3 (1-39)||(46474818-46474856)
chr3 (1-39)||(46475167-46475205)
chr3 (1-39)||(53756747-53756785)
chr3 (5-43)||(53856448-53856486)
chr3 (77-162)||(17268849-17268934)
chr3 (1-38)||(41558269-41558306)
chr3 (5-42)||(53856015-53856052)
chr3 (9-41)||(35712045-35712077)
[»] chr2 (50 HSPs)
chr2 (105-173)||(29242654-29242722)
chr2 (1-44)||(11163410-11163453)
chr2 (1-43)||(16099411-16099453)
chr2 (106-182)||(37284276-37284353)
chr2 (105-169)||(855576-855640)
chr2 (1-45)||(39498666-39498710)
chr2 (1-45)||(44045389-44045433)
chr2 (1-44)||(6657876-6657919)
chr2 (1-44)||(39423902-39423945)
chr2 (1-43)||(3555249-3555291)
chr2 (1-43)||(36755475-36755517)
chr2 (1-43)||(45556111-45556153)
chr2 (1-43)||(45556434-45556476)
chr2 (77-146)||(6191124-6191193)
chr2 (1-42)||(6658234-6658275)
chr2 (56-173)||(10077612-10077728)
chr2 (1-45)||(15848475-15848519)
chr2 (1-44)||(25231235-25231278)
chr2 (1-43)||(2318897-2318939)
chr2 (1-39)||(6588686-6588724)
chr2 (1-43)||(15848087-15848129)
chr2 (105-182)||(24490645-24490723)
chr2 (77-182)||(35954222-35954327)
chr2 (1-43)||(36382514-36382556)
chr2 (1-43)||(37895346-37895388)
chr2 (1-43)||(44044113-44044155)
chr2 (1-42)||(9076454-9076495)
chr2 (1-42)||(10713110-10713151)
chr2 (1-42)||(16099055-16099096)
chr2 (1-42)||(25230102-25230143)
chr2 (86-150)||(30632611-30632675)
chr2 (1-45)||(36382158-36382202)
chr2 (1-45)||(44714148-44714191)
chr2 (105-148)||(8794609-8794651)
chr2 (112-182)||(17448888-17448959)
chr2 (103-150)||(30669097-30669144)
chr2 (1-44)||(34448182-34448225)
chr2 (1-40)||(36480105-36480144)
chr2 (86-132)||(30666688-30666734)
chr2 (1-43)||(34447812-34447854)
chr2 (1-39)||(37895734-37895772)
chr2 (1-35)||(39498317-39498351)
chr2 (1-42)||(11163054-11163095)
chr2 (103-132)||(30666769-30666798)
chr2 (1-42)||(30729621-30729662)
chr2 (9-41)||(2318160-2318192)
chr2 (1-45)||(10712720-10712764)
chr2 (119-182)||(11711254-11711318)
chr2 (1-40)||(36479719-36479759)
chr2 (105-133)||(39293203-39293231)
[»] scaffold0020 (3 HSPs)
scaffold0020 (77-181)||(152235-152340)
scaffold0020 (1-45)||(139669-139713)
scaffold0020 (1-39)||(140028-140066)
[»] chr8 (60 HSPs)
chr8 (105-188)||(26938956-26939040)
chr8 (1-44)||(12198948-12198991)
chr8 (1-44)||(12443376-12443419)
chr8 (1-44)||(23663901-23663944)
chr8 (1-43)||(8316975-8317017)
chr8 (1-43)||(20386817-20386859)
chr8 (109-182)||(24916134-24916208)
chr8 (77-162)||(15966444-15966529)
chr8 (1-42)||(20385568-20385609)
chr8 (1-42)||(38956059-38956100)
chr8 (1-45)||(1425050-1425094)
chr8 (1-45)||(12273240-12273284)
chr8 (1-45)||(16388580-16388624)
chr8 (1-45)||(23698631-23698675)
chr8 (56-172)||(26938648-26938764)
chr8 (1-45)||(33357495-33357539)
chr8 (1-42)||(39071676-39071717)
chr8 (1-45)||(7313392-7313436)
chr8 (1-45)||(13186446-13186490)
chr8 (56-140)||(33038255-33038339)
chr8 (1-45)||(36186451-36186495)
chr8 (1-40)||(12272920-12272959)
chr8 (1-44)||(23663543-23663586)
chr8 (1-40)||(40317966-40318005)
chr8 (1-43)||(4995043-4995085)
chr8 (1-43)||(7306398-7306440)
chr8 (1-43)||(8316652-8316694)
chr8 (105-182)||(12596851-12596929)
chr8 (1-43)||(13186059-13186101)
chr8 (105-182)||(17153535-17153613)
chr8 (1-43)||(22915745-22915787)
chr8 (8-42)||(23698308-23698342)
chr8 (79-173)||(24292247-24292341)
chr8 (1-39)||(38862950-38862988)
chr8 (1-43)||(40318351-40318393)
chr8 (1-42)||(16388913-16388954)
chr8 (1-42)||(34685644-34685685)
chr8 (1-42)||(38955703-38955744)
chr8 (103-151)||(16483773-16483821)
chr8 (1-41)||(30712103-30712143)
chr8 (1-41)||(30719880-30719920)
chr8 (1-45)||(39072028-39072072)
chr8 (77-133)||(39344630-39344686)
chr8 (105-140)||(2414911-2414946)
chr8 (3-41)||(4405700-4405738)
chr8 (105-182)||(17157070-17157148)
chr8 (105-151)||(30743921-30743967)
chr8 (105-171)||(42024078-42024144)
chr8 (1-42)||(4406047-4406088)
chr8 (1-42)||(30459371-30459412)
chr8 (1-42)||(31608900-31608941)
chr8 (105-162)||(33695140-33695197)
chr8 (12-45)||(34060486-34060519)
chr8 (1-42)||(38862618-38862659)
chr8 (1-42)||(42803605-42803646)
chr8 (1-41)||(1425408-1425448)
chr8 (9-45)||(4994654-4994690)
chr8 (1-45)||(7295314-7295358)
chr8 (7-43)||(9065763-9065799)
chr8 (1-45)||(30710853-30710897)
[»] chr5 (68 HSPs)
chr5 (1-44)||(28770867-28770910)
chr5 (1-43)||(3528872-3528914)
chr5 (1-43)||(11761748-11761790)
chr5 (1-43)||(11762104-11762146)
chr5 (1-43)||(24547512-24547554)
chr5 (79-173)||(26724118-26724212)
chr5 (1-42)||(3529229-3529270)
chr5 (78-147)||(5459203-5459272)
chr5 (1-42)||(27587148-27587189)
chr5 (1-42)||(27587502-27587543)
chr5 (1-45)||(5993886-5993930)
chr5 (1-45)||(6150807-6150851)
chr5 (1-45)||(14194420-14194464)
chr5 (77-153)||(38607323-38607399)
chr5 (104-159)||(3746694-3746749)
chr5 (1-44)||(20814522-20814565)
chr5 (1-44)||(20840531-20840574)
chr5 (1-43)||(6150453-6150495)
chr5 (1-43)||(16157242-16157284)
chr5 (1-43)||(18247463-18247505)
chr5 (3-45)||(24547174-24547216)
chr5 (1-42)||(5024019-5024060)
chr5 (1-42)||(17202786-17202827)
chr5 (1-42)||(28771225-28771266)
chr5 (1-45)||(13962861-13962905)
chr5 (1-41)||(18247087-18247127)
chr5 (1-45)||(19892305-19892349)
chr5 (1-45)||(32242239-32242283)
chr5 (107-159)||(36235775-36235827)
chr5 (1-41)||(38442454-38442494)
chr5 (1-44)||(20840824-20840867)
chr5 (1-44)||(28269420-28269463)
chr5 (1-40)||(35512501-35512540)
chr5 (1-44)||(38475386-38475429)
chr5 (1-40)||(39453302-39453341)
chr5 (1-39)||(5024405-5024443)
chr5 (1-39)||(11740690-11740728)
chr5 (1-43)||(18670201-18670243)
chr5 (1-43)||(32242628-32242670)
chr5 (105-182)||(35270565-35270643)
chr5 (56-150)||(38948553-38948647)
chr5 (77-182)||(39058522-39058628)
chr5 (1-43)||(39453686-39453728)
chr5 (1-43)||(42265734-42265776)
chr5 (1-39)||(43159201-43159239)
chr5 (1-42)||(186806-186847)
chr5 (7-44)||(27937053-27937090)
chr5 (1-37)||(8322791-8322827)
chr5 (1-41)||(16156856-16156896)
chr5 (1-41)||(19517994-19518034)
chr5 (1-45)||(20814133-20814177)
chr5 (1-45)||(35512145-35512189)
chr5 (1-40)||(19892695-19892734)
chr5 (1-44)||(28269767-28269809)
chr5 (1-44)||(29646360-29646403)
chr5 (1-40)||(37992675-37992714)
chr5 (1-39)||(11047823-11047861)
chr5 (1-39)||(13362615-13362653)
chr5 (1-43)||(16083330-16083372)
chr5 (105-171)||(16089694-16089760)
chr5 (1-43)||(17202398-17202440)
chr5 (1-39)||(21257548-21257586)
chr5 (1-43)||(21265529-21265571)
chr5 (1-39)||(27937386-27937424)
chr5 (1-42)||(35920571-35920612)
chr5 (103-131)||(2299298-2299326)
chr5 (1-41)||(11741904-11741944)
chr5 (1-45)||(37991196-37991240)
[»] scaffold0233 (1 HSPs)
scaffold0233 (105-182)||(17016-17094)
[»] scaffold0007 (2 HSPs)
scaffold0007 (1-43)||(2128-2170)
scaffold0007 (3-44)||(1767-1808)
[»] chr1 (65 HSPs)
chr1 (1-43)||(25647883-25647925)
chr1 (1-42)||(26024779-26024820)
chr1 (1-45)||(23209714-23209758)
chr1 (1-45)||(30711714-30711758)
chr1 (1-45)||(35473628-35473672)
chr1 (1-45)||(43759209-43759253)
chr1 (1-44)||(19515817-19515860)
chr1 (1-44)||(36694280-36694323)
chr1 (1-44)||(36710381-36710424)
chr1 (1-44)||(47999479-47999522)
chr1 (1-43)||(17661851-17661893)
chr1 (1-43)||(26024422-26024464)
chr1 (1-42)||(183221-183262)
chr1 (1-42)||(6367562-6367603)
chr1 (1-42)||(24009575-24009616)
chr1 (1-42)||(34464449-34464490)
chr1 (1-42)||(34850452-34850493)
chr1 (2-43)||(40772847-40772888)
chr1 (1-42)||(47999123-47999164)
chr1 (1-45)||(13914065-13914109)
chr1 (103-151)||(20985957-20986005)
chr1 (1-45)||(34464836-34464880)
chr1 (1-45)||(35152340-35152384)
chr1 (1-41)||(35152717-35152757)
chr1 (1-45)||(37578189-37578233)
chr1 (1-44)||(5734008-5734051)
chr1 (1-44)||(41098731-41098774)
chr1 (1-44)||(42533022-42533065)
chr1 (103-181)||(50919371-50919449)
chr1 (1-43)||(6367949-6367991)
chr1 (1-43)||(7820953-7820995)
chr1 (1-43)||(17662237-17662279)
chr1 (1-39)||(17692572-17692610)
chr1 (1-43)||(19017628-19017670)
chr1 (1-43)||(37578579-37578621)
chr1 (1-39)||(40435348-40435386)
chr1 (8-45)||(183586-183623)
chr1 (1-42)||(6518183-6518224)
chr1 (1-42)||(30711327-30711368)
chr1 (1-42)||(34849011-34849052)
chr1 (1-42)||(40772507-40772548)
chr1 (1-42)||(46899061-46899102)
chr1 (1-41)||(4960541-4960581)
chr1 (1-45)||(19018016-19018060)
chr1 (105-173)||(37471025-37471093)
chr1 (1-45)||(51015630-51015674)
chr1 (78-188)||(33753026-33753136)
chr1 (1-44)||(36694635-36694678)
chr1 (1-44)||(36710736-36710779)
chr1 (1-40)||(42248475-42248514)
chr1 (1-43)||(7231636-7231678)
chr1 (56-150)||(13392840-13392934)
chr1 (1-39)||(40210373-40210411)
chr1 (5-43)||(48779510-48779548)
chr1 (1-35)||(49723113-49723147)
chr1 (1-43)||(51019736-51019778)
chr1 (77-181)||(1444962-1445066)
chr1 (5-42)||(26234441-26234478)
chr1 (100-169)||(29307675-29307744)
chr1 (1-42)||(31197065-31197106)
chr1 (1-42)||(32917647-32917688)
chr1 (1-41)||(13300291-13300331)
chr1 (1-41)||(13914454-13914494)
chr1 (1-33)||(14878980-14879012)
chr1 (1-41)||(48692401-48692441)
[»] scaffold0707 (1 HSPs)
scaffold0707 (1-43)||(6466-6508)
[»] scaffold0005 (3 HSPs)
scaffold0005 (105-162)||(253838-253895)
scaffold0005 (1-43)||(37950-37992)
scaffold0005 (106-140)||(33559-33593)
[»] scaffold0075 (2 HSPs)
scaffold0075 (1-42)||(14777-14818)
scaffold0075 (1-45)||(14426-14470)
[»] scaffold0031 (2 HSPs)
scaffold0031 (1-42)||(68965-69006)
scaffold0031 (1-42)||(69352-69393)
[»] scaffold0775 (1 HSPs)
scaffold0775 (1-44)||(4960-5003)
[»] scaffold0478 (2 HSPs)
scaffold0478 (105-182)||(3219-3297)
scaffold0478 (105-182)||(8597-8675)
[»] scaffold0002 (1 HSPs)
scaffold0002 (106-140)||(363166-363200)
[»] scaffold0295 (1 HSPs)
scaffold0295 (2-43)||(2517-2558)


Alignment Details
Target: chr7 (Bit Score: 113; Significance: 4e-57; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 120 - 345
Target Start/End: Original strand, 30851990 - 30852218
Alignment:
Q  120 taaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaaatatttaacactaaatttattgatttttctcaataccaaaatatag 219  Q
    ||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  30851990 taaaattatataggaactaa-gttgaaaactcttaattttattaggactaaaaaatatttaacactaaatttattgatatttctcaatgccaaaatatag 30852088  T
Q  220 ttcaatatagttaaagtaatcaaag-gctacacc---agnnnnnnnnngtaatcaaaggcttgtttattgtgaatcatcgttatttgactagtatgtgtg 315  Q
    |||| |||||||||||||||||||| ||| ||||   |           || ||||||||||||||| |||||||||| |||||||||||||| ||||||    
T  30852089 ttcagtatagttaaagtaatcaaagagctgcaccataaaattaaaaaaatagtcaaaggcttgtttagtgtgaatcatagttatttgactagtttgtgtg 30852188  T
Q  316 atttctgcgaattaattctcgtaccaaaca 345  Q
    ||| | ||||||||||| ||||||||||||    
T  30852189 attcccgcgaattaattgtcgtaccaaaca 30852218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 53 - 194
Target Start/End: Original strand, 30851677 - 30851818
Alignment:
Q  53 gtcaaaagtttgtaagataggaaatattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactct 152  Q
    ||||||| ||| ||| ||||| | |||||||| ||||||||||| |||| || ||||||||||||||||||||||||||||| |||||||||||||||||    
T  30851677 gtcaaaattttttaaaatagggactattcttacaaacttcaatattatggaaaactaaaattaccattaaaattttataggatctaaagttgaaaactct 30851776  T
Q  153 taattttataaggactaaaaaatatttaacactaaatttatt 194  Q
    |||||||||| | |||||||||||||||||||||||||||||    
T  30851777 taattttataggaactaaaaaatatttaacactaaatttatt 30851818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 27567731 - 27567843
Alignment:
Q  77 tattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-at 175  Q
    |||||||| ||||| ||||| |||| | ||||||||||||||||||||||||||||| | |||| || ||||||| | ||||| || |||||||||| ||    
T  27567731 tattcttacaaactacaatattatgtaggactaaaattaccattaaaattttatagggaataaactttaaaactcatgattttgtagggactaaaaatat 27567830  T
Q  176 atttaacactaaa 188  Q
    ||||||| |||||    
T  27567831 atttaaccctaaa 27567843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 17102376 - 17102420
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  17102376 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 17102420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 6253827 - 6253869
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6253827 taaacgacccctaattgcaaggatcaaatacatatttaagcct 6253869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6571054 - 6571012
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6571054 taaacgacccctaattgcaaggatcaaatacatatttaagcct 6571012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 17102061 - 17102019
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  17102061 taaacgacccctaattgcaaggatcaaatacatatttaagcct 17102019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27991780 - 27991738
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27991780 taaacgacccctaattgcaaggatcaaatacatatttaagcct 27991738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 32298818 - 32298776
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  32298818 taaacgacccctaattgcaaggatcaaatacatatttaagcct 32298776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5457294 - 5457338
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  5457294 taaacgacccctaattgcaaggatgaaatacatatttaagcctaa 5457338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6253512 - 6253472
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagc 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  6253512 taaacgacccctaattgcaaggatcaaatacatatttaagc 6253472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27396982 - 27397026
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  27396982 taaacgacccctaattgcaaggatgaaatacatatttaagcctaa 27397026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 45010991 - 45011035
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  45010991 taaacgacccctaattgcaaggatgaaatacatatttaagcctaa 45011035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28469395 - 28469438
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  28469395 taaacgacccctaattgcaaggatgaaatacatatttaagccta 28469438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 19204530 - 19204488
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  19204530 taaacgacccctaatttcaaggatcaaatacatatttaagcct 19204488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 105 - 182
Target Start/End: Complemental strand, 20132129 - 20132051
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-atatttaac 182  Q
    |||||||||||| ||||||||||||| | ||||||| || ||||||| ||||| |||| |||||||||| |||||||||    
T  20132129 gactaaaattacaattaaaattttattgaaactaaacttaaaaactcataattatatagggactaaaaacatatttaac 20132051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 22871664 - 22871706
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  22871664 taaatgacccctaattgcaaggatcaaatacatatttaagcct 22871706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 24389172 - 24389214
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  24389172 taaacgacccctaattgcaaggatgaaatacatatttaagcct 24389214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 27992095 - 27992133
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaa 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27992095 taaacgacccctaattgcaaggatcaaatacatatttaa 27992133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 28469051 - 28469009
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  28469051 taaacgacccctaattgcaaggatgaaatacatatttaagcct 28469009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 77 - 159
Target Start/End: Original strand, 40751696 - 40751778
Alignment:
Q  77 tattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaatttt 159  Q
    |||||||| |||||  |||| |||||| ||| | ||||| |||||||||||||||||||||||| |||||||||  |||||||    
T  40751696 tattcttacaaactaaaatattatgaaggacaataattagcattaaaattttataggaactaaacttgaaaacttataatttt 40751778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 18670250 - 18670291
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  18670250 taaacgacccctaattgcaaggattaaatacatatttaagcc 18670291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 21367242 - 21367165
Alignment:
Q  108 taaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-atatttaacac 184  Q
    ||||||||||||||||||||||||   |||||| || ||||||| |||||||||| || ||||||| |||||||||||    
T  21367242 taaaattaccattaaaattttataaagactaaatttaaaaactcataattttataggggctaaaaacatatttaacac 21367165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 28105542 - 28105498
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||    
T  28105542 taaacgacccttaattgcaaggatgaaatacatatttaagcctaa 28105498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 32299092 - 32299132
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagc 41  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  32299092 taaacgactcctaattgcaaggatcaaatacatatttaagc 32299132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 48788844 - 48788800
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    ||||||||||||||||||||| || ||||||||||||||||||||    
T  48788844 taaacgacccctaattgcaagaatgaaatacatatttaagcctaa 48788800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42731806 - 42731849
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    |||||||||||||||| ||||||| |||||||||||||||||||    
T  42731806 taaacgacccctaattacaaggatgaaatacatatttaagccta 42731849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2640219 - 2640177
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||||||||||||||| |||||| ||||||||||||||||||    
T  2640219 taaacgacccctaattgtaaggatgaaatacatatttaagcct 2640177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10936181 - 10936223
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||| |||||||||||||||||| ||||||||||||||||||    
T  10936181 taaacaacccctaattgcaaggatgaaatacatatttaagcct 10936223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 182
Target Start/End: Complemental strand, 11297833 - 11297755
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-atatttaac 182  Q
    ||||||||||||||||||||||| |||||||||||  || ||||||| | ||||| || ||| |||||| |||||||||    
T  11297833 gactaaaattaccattaaaatttcataggaactaagcttaaaaactcattattttgtagggaataaaaacatatttaac 11297755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 29141563 - 29141605
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||||||| |||||||||||||| ||||||||||||||||||    
T  29141563 taaacgacctctaattgcaaggatgaaatacatatttaagcct 29141605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10935835 - 10935794
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||||||||||||||||||| ||||||| |||||||||    
T  10935835 taaacgacccctaattgcaaggatgaaatacacatttaagcc 10935794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 13386134 - 13386175
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  13386134 taaacgacccctaattgcaagtattaaatacatatttaagcc 13386175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 37657224 - 37657265
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||| |||||||||||||||| |||||||||||||||||    
T  37657224 taaacgatccctaattgcaaggatgaaatacatatttaagcc 37657265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 40380071 - 40380112
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||| ||||||||||||||| |||||||||||||||||    
T  40380071 taaacgactcctaattgcaaggatgaaatacatatttaagcc 40380112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 42362491 - 42362450
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||| ||||||||||||||| |||||||||||||||||    
T  42362491 taaacgacacctaattgcaaggatgaaatacatatttaagcc 42362450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 42731460 - 42731419
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  42731460 taaacgacccctaattgcaaggatgagatacatatttaagcc 42731419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 8894560 - 8894632
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaaatat 177  Q
    ||||||||||| ||||||||||| ||||| | | ||||||||| ||||  ||||| || ||||||||||||||    
T  8894560 gactaaaattatcattaaaatttaatagggagttaagttgaaagctctagattttgtagggactaaaaaatat 8894632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 20426717 - 20426761
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    ||||||||| ||||||||| |||| ||||||||||||||||||||    
T  20426717 taaacgacctctaattgcagggatgaaatacatatttaagcctaa 20426761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23181381 - 23181421
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagc 41  Q
    |||||||||||||||||||| ||| ||||||||||||||||    
T  23181381 taaacgacccctaattgcaatgatgaaatacatatttaagc 23181421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 24388860 - 24388816
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||| ||||||||||||| ||||||||||||||| ||||    
T  24388860 taaacgacccataattgcaaggatgaaatacatatttaagtctaa 24388816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 29144369 - 29144413
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||    
T  29144369 taaacgacccctaattgcagggacgaaatacatatttaagcctaa 29144413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 34471298 - 34471230
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa 173  Q
    ||||||||||||||||||||||||||||| |||||| || ||| ||  | ||||| || ||||||||||    
T  34471298 gactaaaattaccattaaaattttatagggactaaacttaaaagcttgtgattttgtagggactaaaaa 34471230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34799545 - 34799585
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagc 41  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  34799545 taaacgacccctatttgcagggatcaaatacatatttaagc 34799585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 40379810 - 40379774
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatattt 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  40379810 taaacgacccctaattgcaaggatgaaatacatattt 40379774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 42019638 - 42019598
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagc 41  Q
    |||||||||| ||||||||||||| ||||||||||||||||    
T  42019638 taaacgacccttaattgcaaggatgaaatacatatttaagc 42019598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 7379155 - 7379069
Alignment:
Q  92 caataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaaatattt 179  Q
    ||||| |||||| ||||||||| | ||||||||||||||| | | |||| || ||||||  ||||||||  |||||||||||||||||    
T  7379155 caatattatgaatgactaaaataatcattaaaattttataaggattaaacttaaaaacttataatttta-caggactaaaaaatattt 7379069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 17886885 - 17886920
Alignment:
Q  9 ccctaattgcaaggatcaaatacatatttaagccta 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  17886885 ccctaattgcaaggatgaaatacatatttaagccta 17886920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 31740181 - 31740096
Alignment:
Q  92 caataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaaatattt 179  Q
    ||||| |||||| ||||||||| | ||||||||||||||||| | |||| || |||| |  ||||||||| |||||||||||||||||    
T  31740181 caatattatgaatgactaaaataatcattaaaattttatagg-attaaacttaaaaatttgtaattttat-aggactaaaaaatattt 31740096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 140
Target Start/End: Complemental strand, 12925287 - 12925253
Alignment:
Q  106 actaaaattaccattaaaattttataggaactaaa 140  Q
    |||||||||| ||||||||||||||||||||||||    
T  12925287 actaaaattatcattaaaattttataggaactaaa 12925253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27396670 - 27396628
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||| ||||||||| ||||||| ||||||||||||||||||    
T  27396670 taaacggcccctaattacaaggatgaaatacatatttaagcct 27396628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 32053184 - 32053142
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||| ||||| ||||||| ||||||||||||||||||    
T  32053184 taaacgacccataattacaaggatgaaatacatatttaagcct 32053142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 34793945 - 34793903
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||    
T  34793945 taaacgacccctatttgcagggataaaatacatatttaagcct 34793903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 42019984 - 42020022
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaa 39  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  42019984 taaacaacccctaattgcaaggatgaaatacatatttaa 42020022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 182
Target Start/End: Original strand, 39596837 - 39596919
Alignment:
Q  105 gactaaaattaccattaaaattttata----ggaactaaagttgaaaactcttaattttataaggactaaaaa-atatttaac 182  Q
    ||||||||||| |||||||| ||||||    | ||||||| || ||||||| |||||||||||||| |||||| |||||||||    
T  39596837 gactaaaattatcattaaaaatttatatatagaaactaaacttaaaaactcgtaattttataaggattaaaaacatatttaac 39596919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 43123216 - 43123175
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||||||||||||||| |||  |||||||||||||||||    
T  43123216 taaacgacccctaattgcagggacgaaatacatatttaagcc 43123175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 1960266 - 1960302
Alignment:
Q  5 cgacccctaattgcaaggatcaaatacatatttaagc 41  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  1960266 cgacccctatttgcagggatcaaatacatatttaagc 1960302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 9e-55; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 120 - 345
Target Start/End: Original strand, 30465511 - 30465739
Alignment:
Q  120 taaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaaatatttaacactaaatttattgatttttctcaataccaaaatatag 219  Q
    ||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  30465511 taaaattatataggaactaa-gttgaaaactcttaattttattaggactaaaaaatatttaacactaaatttattgatatttctcaatgccaaaatatag 30465609  T
Q  220 ttcaatatagttaaagtaatcaaag-gctacacc---agnnnnnnnnngtaatcaaaggcttgtttattgtgaatcatcgttatttgactagtatgtgtg 315  Q
    |||| |||||||||||||||||||| ||| ||||   |           || ||||||||||||||| |||||||||| ||||||||||||||  |||||    
T  30465610 ttcagtatagttaaagtaatcaaagagctgcaccataaaattaaaaaaatagtcaaaggcttgtttagtgtgaatcatagttatttgactagttcgtgtg 30465709  T
Q  316 atttctgcgaattaattctcgtaccaaaca 345  Q
    ||| | ||||||||||| ||||||||||||    
T  30465710 attcccgcgaattaattgtcgtaccaaaca 30465739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 120 - 345
Target Start/End: Original strand, 5644786 - 5645015
Alignment:
Q  120 taaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaaatatttaacactaaatttattgatttttctcaataccaaaatatag 219  Q
    ||||||| |||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  5644786 taaaattatataggaactaa-gttgaaaactcttaattttattaggattaaaaaatatttaacactaaatttattgatatttctcaatgccaaaatatag 5644884  T
Q  220 ttcaatatagttaaagtaatcaaag-gctacacc----agnnnnnnnnngtaatcaaaggcttgtttattgtgaatcatcgttatttgactagtatgtgt 314  Q
    |||| |||||||||||||||||||| ||| ||||    |           || ||||||||||||||| |||||||||| ||||||||||||||  ||||    
T  5644885 ttcagtatagttaaagtaatcaaagagctgcaccataaaattaaaaaaaatagtcaaaggcttgtttagtgtgaatcatagttatttgactagttcgtgt 5644984  T
Q  315 gatttctgcgaattaattctcgtaccaaaca 345  Q
    |||| | ||||||||||| ||||||||||||    
T  5644985 gattcccgcgaattaattgtcgtaccaaaca 5645015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 53 - 194
Target Start/End: Original strand, 30465198 - 30465339
Alignment:
Q  53 gtcaaaagtttgtaagataggaaatattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactct 152  Q
    ||||||| ||| ||| ||||| | |||||||| ||||||||||| |||| || ||||||||||||||||||||||||||||| |||||||||||||||||    
T  30465198 gtcaaaattttttaaaatagggactattcttacaaacttcaatattatggaaaactaaaattaccattaaaattttataggatctaaagttgaaaactct 30465297  T
Q  153 taattttataaggactaaaaaatatttaacactaaatttatt 194  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  30465298 taattttatagggactaaaaaatatttaacactaaatttatt 30465339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 10311713 - 10311636
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggac-taaaaaatatttaa 181  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| ||||| ||||||||    
T  10311713 gactaaaattaccattaaaattttataggaactaaatttgaaaactcgtgattttataaggacttaaaacatatttaa 10311636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 681115 - 681158
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  681115 taaacgacccctaattgcaaggatcaaatacatatttaagccta 681158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30337490 - 30337447
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  30337490 taaacgacccctaattgcaaggatcaaatacatatttaagccta 30337447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 17734237 - 17734195
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  17734237 taaacgacccctaattgcaaggatcaaatacatatttaagcct 17734195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 182
Target Start/End: Complemental strand, 17957105 - 17957027
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-atatttaac 182  Q
    |||||||||||| ||||||||||||| ||||||||| || ||||||| ||||| |||| |||||||||| |||||||||    
T  17957105 gactaaaattacaattaaaattttattggaactaaacttaaaaactcataattatatagggactaaaaacatatttaac 17957027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 182
Target Start/End: Original strand, 25042927 - 25043004
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-atatttaac 182  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||| | ||||| || |||||||||| |||||||||    
T  25042927 gactaaaattaccattaaaattttatagg-actaaatttgaaaactcatgattttgtagggactaaaaacatatttaac 25043004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 26463220 - 26463176
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  26463220 taaacgacccctaattgcagggatcaaatacatatttaagcctaa 26463176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 33647338 - 33647382
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  33647338 taaacgacccctaattgcaaggatgaaatacatatttaagcctaa 33647382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13379869 - 13379912
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  13379869 taaacgacccctaattgcagggatcaaatacatatttaagccta 13379912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 30726146 - 30726189
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  30726146 taaacgacccctaattgcaaggatgaaatacatatttaagccta 30726189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 679907 - 679865
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  679907 taaacgacccttaattgcaaggatcaaatacatatttaagcct 679865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 3059643 - 3059685
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  3059643 taaacgacccctaattgcaaggatgaaatacatatttaagcct 3059685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 33517921 - 33517963
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  33517921 taaacgacccctaattgcaaggatgaaatacatatttaagcct 33517963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 173
Target Start/End: Original strand, 17158510 - 17158583
Alignment:
Q  100 tgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa 173  Q
    ||||||||||||||||| |||||||| || |||| ||| ||  ||||||||| |||||||||| ||||||||||    
T  17158510 tgaaagactaaaattactattaaaatgttgtagggactcaacgtgaaaactcataattttatagggactaaaaa 17158583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 30337805 - 30337846
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  30337805 taaatgacccctaattgcaaggatcaaatacatatttaagcc 30337846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8090314 - 8090358
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    ||||||||||||||||||||||||  |||||||||||||||||||    
T  8090314 taaacgacccctaattgcaaggatgtaatacatatttaagcctaa 8090358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 12081023 - 12081067
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||    
T  12081023 taaacgactcctaattgcaaggatgaaatacatatttaagcctaa 12081067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 24672358 - 24672302
Alignment:
Q  92 caataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaa 148  Q
    ||||| |||| | ||||||||||||||||||||||||||||| |||||| |||||||    
T  24672358 caatattatggaggactaaaattaccattaaaattttatagggactaaacttgaaaa 24672302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 181
Target Start/End: Complemental strand, 12611904 - 12611793
Alignment:
Q  71 aggaaatattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaa 170  Q
    ||||| ||||||||||||||  |||  |||| | ||||||||||||||||||||||||| ||| | |||| || |||| || | ||||| || |||||||    
T  12611904 aggaactattcttataaactataatgttatggaggactaaaattaccattaaaattttagagggattaaatttaaaaattcatgattttgtagggactaa 12611805  T
Q  171 aaa-atatttaa 181  Q
    ||| ||||||||    
T  12611804 aaacatatttaa 12611793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 20651051 - 20651008
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||    
T  20651051 taaacgatccctaattgcagggatcaaatacatatttaagccta 20651008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 30804248 - 30804291
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    |||||||||||||||||||||||| |||||||||||||| ||||    
T  30804248 taaacgacccctaattgcaaggatgaaatacatatttaatccta 30804291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 182
Target Start/End: Original strand, 10516634 - 10516740
Alignment:
Q  77 tattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-at 175  Q
    |||||||| ||||| ||||| |||| | | ||||||||| ||||| ||||||||||| |||||| || ||||||  | ||||| || |||||||||| ||    
T  10516634 tattcttacaaactacaatattatggagggctaaaattatcattacaattttatagggactaaatttaaaaacttatgattttgtagggactaaaaacat 10516733  T
Q  176 atttaac 182  Q
    |||||||    
T  10516734 atttaac 10516740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 21628104 - 21628142
Alignment:
Q  5 cgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  21628104 cgacccctaattgcaaggatgaaatacatatttaagcct 21628142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 187
Target Start/End: Complemental strand, 3807193 - 3807061
Alignment:
Q  56 aaaagtttgtaagataggaaatattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaa 155  Q
    ||||||||  || ||||| | |||||||| ||||| | | | |||| | ||| ||||||||||||||||||||||||  ||||||  | ||||||  | |    
T  3807193 aaaagttttcaaaatagggactattcttacaaactactaaattatggaggacgaaaattaccattaaaattttatagagactaaacataaaaacttatga 3807094  T
Q  156 ttttataaggactaaaaa-atatttaacactaa 187  Q
    ||||||| |||||||||| ||||||||| ||||    
T  3807093 ttttatagggactaaaaacatatttaactctaa 3807061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 17734550 - 17734590
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagc 41  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  17734550 taaacgacccataattgtaaggatcaaatacatatttaagc 17734590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3059298 - 3059255
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    |||||||||| ||||||||||||| |||||||||||||| ||||    
T  3059298 taaacgacccttaattgcaaggatgaaatacatatttaaaccta 3059255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 11434843 - 11434804
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaag 40  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  11434843 taaacgacccttaattgcaaggatgaaatacatatttaag 11434804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 12080677 - 12080638
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaag 40  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  12080677 taaacgacccctaattgcaaggatgaaatacaaatttaag 12080638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12408558 - 12408601
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||| ||||||||||| |||||| |||||||||||||||||||    
T  12408558 taaacaacccctaattgtaaggatgaaatacatatttaagccta 12408601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 182
Target Start/End: Complemental strand, 6197885 - 6197808
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-atatttaac 182  Q
    ||||||| ||||||||||||||||||| | |||||| ||||||| |  | |||||||| |||||||||| |||||||||    
T  6197885 gactaaatttaccattaaaattttatatggactaaacttgaaaa-ttgtgattttatagggactaaaaacatatttaac 6197808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 140
Target Start/End: Complemental strand, 14896875 - 14896841
Alignment:
Q  106 actaaaattaccattaaaattttataggaactaaa 140  Q
    |||||||||| ||||||||||||||||||||||||    
T  14896875 actaaaattatcattaaaattttataggaactaaa 14896841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 22617924 - 22617886
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaa 39  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  22617924 taaacgactcctaattgcaaggatgaaatacatatttaa 22617886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 30039480 - 30039530
Alignment:
Q  77 tattcttataaacttcaataatatgaaagactaaaattaccattaaaattt 127  Q
    |||||||| ||| ||||||||||||||  |||||||||| |||||||||||    
T  30039480 tattcttacaaatttcaataatatgaataactaaaattatcattaaaattt 30039530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15115380 - 15115339
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||| | |||||||||||||| |||||||||||||||||    
T  15115380 taaacgatctctaattgcaaggatgaaatacatatttaagcc 15115339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 15116619 - 15116660
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||||||||||||||||||  ||||||||||| |||||    
T  15116619 taaacgacccctaattgcaaggacgaaatacatattaaagcc 15116660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 26464586 - 26464627
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||| |||||||||||||| |||| |||||||||||||||||    
T  26464586 taaatgacccctaattgcagggatgaaatacatatttaagcc 26464627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 1e-41; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 53 - 235
Target Start/End: Original strand, 26081200 - 26081381
Alignment:
Q  53 gtcaaaagtttgtaagataggaaatattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactct 152  Q
    ||||||||||| ||| ||||||| ||||||||||||||| |||| | || | || |||||||| || ||||||||||| | ||||||| |||||||||||    
T  26081200 gtcaaaagtttttaaaataggaactattcttataaactttaatattgtggaggagtaaaattatcaataaaattttatcgaaactaaaattgaaaactct 26081299  T
Q  153 taattttataaggactaaaaaatatttaacactaaatttattgatttttctcaataccaaaatatagttcaatatagttaaag 235  Q
    ||||||||  ||||||||||||||||||||||||||||||||||| ||||   || ||||||||||||||| ||| |||||||    
T  26081300 taatttta-caggactaaaaaatatttaacactaaatttattgatatttccatatgccaaaatatagttcagtattgttaaag 26081381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 77 - 182
Target Start/End: Complemental strand, 40390992 - 40390887
Alignment:
Q  77 tattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-at 175  Q
    |||||||| ||||| ||||| |||| | ||||||||||| |||||||||||||||||||||||| |||||||||| | ||||| || |||||||||| ||    
T  40390992 tattcttacaaactacaata-tatggaggactaaaattatcattaaaattttataggaactaaacttgaaaactcatgattttgtagggactaaaaacat 40390894  T
Q  176 atttaac 182  Q
    |||||||    
T  40390893 atttaac 40390887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 345
Target Start/End: Original strand, 26081432 - 26081509
Alignment:
Q  268 tcaaaggcttgtttattgtgaatcatcgttatttgactagtatgtgtgatttctgcgaattaattctcgtaccaaaca 345  Q
    ||||| ||||||||| |||||||||| ||||||||||||||  |||||||| ||||||||||| | ||||||||||||    
T  26081432 tcaaaagcttgtttagtgtgaatcattgttatttgactagttcgtgtgattcctgcgaattaagtatcgtaccaaaca 26081509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 33610047 - 33609974
Alignment:
Q  77 tattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaact 150  Q
    |||||||||||||| ||||| ||||||| | |||||||||||||||||||||||| |||||||| || ||||||    
T  33610047 tattcttataaactacaatattatgaaaaattaaaattaccattaaaattttataagaactaaacttaaaaact 33609974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 7451875 - 7451831
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  7451875 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 7451831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13058078 - 13058034
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  13058078 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 13058034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24711467 - 24711511
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  24711467 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 24711511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 50419024 - 50419068
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  50419024 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 50419068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10781871 - 10781914
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  10781871 taaacgacccctaattgcaaggatcaaatacatatttaagccta 10781914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24349715 - 24349672
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  24349715 taaacgacccctaattgcaaggatcaaatacatatttaagccta 24349672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 50418709 - 50418666
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  50418709 taaacgacccctaattgcaaggatcaaatacatatttaagccta 50418666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 10780754 - 10780712
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10780754 taaacgacccctaattgcaaggatcaaatacatatttaagcct 10780712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 10974363 - 10974321
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10974363 taaacgacccctaattgcaaggatcaaatacatatttaagcct 10974321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 23613350 - 23613308
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23613350 taaacgacccctaattgcaaggatcaaatacatatttaagcct 23613308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 24350819 - 24350861
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  24350819 taaacgacccctaattgcaaggatcaaatacatatttaagcct 24350861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 24711152 - 24711110
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  24711152 taaacgacccctaattgcaaggatcaaatacatatttaagcct 24711110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 48528526 - 48528484
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  48528526 taaacgacccctaattgcaaggatcaaatacatatttaagcct 48528484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 7452190 - 7452231
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  7452190 taaacgacccctaattgcaaggatcaaatacatatttaagcc 7452231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23613665 - 23613706
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  23613665 taaacgacccctaattgcaaggatcaaatacatatttaagcc 23613706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 49879248 - 49879208
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagc 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  49879248 taaacgacccctaattgcaaggatcaaatacatatttaagc 49879208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 34765767 - 34765810
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  34765767 taaacgacccctaattgcaaggataaaatacatatttaagccta 34765810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 44967110 - 44967071
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaag 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44967110 taaacgacccctaattgcaaggatcaaatacatatttaag 44967071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 44967425 - 44967468
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  44967425 taaacgacctctaattgcaaggatcaaatacatatttaagccta 44967468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 47472288 - 47472233
Alignment:
Q  77 tattcttataaacttcaataatatgaaagactaaaattaccattaaaattttatag 132  Q
    |||||||||||| | ||||| |||||| ||||||||||||||||||||||||||||    
T  47472288 tattcttataaattacaatattatgaaggactaaaattaccattaaaattttatag 47472233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 51692906 - 51692949
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  51692906 taaacgacccctaattgcaaggatgaaatacatatttaagccta 51692949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 55867501 - 55867544
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  55867501 taaacgacccctaattgcagggatcaaatacatatttaagccta 55867544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 5368988 - 5368946
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  5368988 taaacgatccctaattgcaaggatcaaatacatatttaagcct 5368946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 13058369 - 13058411
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  13058369 taaacgaccccttattgcaaggatcaaatacatatttaagcct 13058411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18831390 - 18831348
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  18831390 taaacgacccctaattgtaaggatcaaatacatatttaagcct 18831348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 37248592 - 37248630
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaa 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  37248592 taaacgacccctaattgcaaggatcaaatacatatttaa 37248630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 46661301 - 46661343
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  46661301 taaacgacccctaattgcaaggatgaaatacatatttaagcct 46661343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 15025850 - 15025781
Alignment:
Q  108 taaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaaatat 177  Q
    |||||||||||||||||||||||| |||||||| || | ||||| | ||||| || ||||||||||||||    
T  15025850 taaaattaccattaaaattttataagaactaaacttaataactcgtgattttgtagggactaaaaaatat 15025781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 18831704 - 18831745
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  18831704 taaacgacccctaattgcaaggatgaaatacatatttaagcc 18831745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 38377884 - 38377815
Alignment:
Q  104 agactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa 173  Q
    |||||||||||||||||||||||||||||| |||||| || |||| |  | ||||| |||||||||||||    
T  38377884 agactaaaattaccattaaaattttatagggactaaacttaaaaatttgtgattttgtaaggactaaaaa 38377815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15508059 - 15508103
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  15508059 taaacgacccctaattgcaaggatgaaatacatatttaagtctaa 15508103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24411735 - 24411779
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||    
T  24411735 taaacgacccttaattgcaaggatgaaatacatatttaagcctaa 24411779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35028039 - 35027995
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||| |||||||||||||| |||||    
T  35028039 taaacgacccctaattgcaaggatgaaatacatatttaaacctaa 35027995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35508627 - 35508671
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||    
T  35508627 taaacgacccctaattgcaatgataaaatacatatttaagcctaa 35508671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36008885 - 36008841
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||    
T  36008885 taaacgatccctaattacaaggatcaaatacatatttaagcctaa 36008841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 39539305 - 39539349
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||    
T  39539305 taaacgacccttaattgcaaggatgaaatacatatttaagcctaa 39539349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 148142 - 148185
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  148142 taaacgacccctaattgcagggatgaaatacatatttaagccta 148185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 16006180 - 16006219
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaag 40  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  16006180 taaacgacccctaattgcaagaatcaaatacatatttaag 16006219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 30802026 - 30801941
Alignment:
Q  92 caataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaaatattt 179  Q
    ||||| |||||| ||||||||| | ||||||||||||||||| | |||| || ||||||  ||||||||| |||||||||||||||||    
T  30802026 caatattatgaatgactaaaataatcattaaaattttatagg-attaaacttaaaaacttgtaattttat-aggactaaaaaatattt 30801941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 34765421 - 34765378
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    |||||||||| ||||||||||||| |||||||||||||||||||    
T  34765421 taaacgacccttaattgcaaggataaaatacatatttaagccta 34765378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 37248277 - 37248238
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaag 40  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  37248277 taaacgacccctaattgcaaggttcaaatacatatttaag 37248238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43155883 - 43155926
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||||||||||||  ||||||||||||||||||||||||||    
T  43155883 taaacgacccctaattataaggatcaaatacatatttaagccta 43155926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 51692594 - 51692551
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||||| |||||||||||||| |||||||||||||||||||    
T  51692594 taaacgacctctaattgcaaggatgaaatacatatttaagccta 51692551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1179187 - 1179229
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||| ||| ||||||||||||||||||    
T  1179187 taaacgacccctaattgcaaagataaaatacatatttaagcct 1179229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 14801777 - 14801735
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||| ||||||||||||||| ||||||||||||||||||    
T  14801777 taaacgactcctaattgcaaggatgaaatacatatttaagcct 14801735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 182
Target Start/End: Original strand, 15882224 - 15882302
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-atatttaac 182  Q
    ||||||||||||||||||||||| ||||| |||||  || ||||||| | ||||| || |||||||||| |||||||||    
T  15882224 gactaaaattaccattaaaatttcatagggactaagcttaaaaactcatgattttgtagggactaaaaacatatttaac 15882302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 17355966 - 17355924
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||| ||||||||||||||| ||||||||||||||||||    
T  17355966 taaacgactcctaattgcaaggatgaaatacatatttaagcct 17355924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 35574352 - 35574418
Alignment:
Q  106 actaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaa 172  Q
    |||||||||||| ||||||||| |||||||||||| |||||| ||| ||||||| | | ||||||||    
T  35574352 actaaaattaccgttaaaatttaataggaactaaatttgaaagctcgtaattttgttaagactaaaa 35574418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 43155570 - 43155532
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaa 39  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  43155570 taaacgacccttaattgcaaggatcaaatacatatttaa 43155532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 53129893 - 53129935
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||| ||||||||||| ||||||||||||||||||    
T  53129893 taaacgacccctgattgcaaggatgaaatacatatttaagcct 53129935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 54086736 - 54086698
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaa 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  54086736 taaacgacccctaattgcaaggatgaaatacatatttaa 54086698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 36009208 - 36009245
Alignment:
Q  8 cccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  36009208 cccctaattacaaggatcaaatacatatttaagcctaa 36009245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 49879563 - 49879596
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacata 34  Q
    ||||||||||||||||||||||||||||||||||    
T  49879563 taaacgacccctaattgcaaggatcaaatacata 49879596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15507714 - 15507674
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagc 41  Q
    |||||||||| ||||||||||||| ||||||||||||||||    
T  15507714 taaacgacccttaattgcaaggatgaaatacatatttaagc 15507674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 33894456 - 33894504
Alignment:
Q  83 tataaacttcaataatatgaaagactaaaattaccattaaaattttata 131  Q
    |||||||| ||||| |||| ||||||||||||| |||||||||||||||    
T  33894456 tataaactacaatattatggaagactaaaattaacattaaaattttata 33894504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 35028391 - 35028427
Alignment:
Q  7 acccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||| ||||||||||||||||||    
T  35028391 acccctaattgcaaggatgaaatacatatttaagcct 35028427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 37976540 - 37976584
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||    
T  37976540 taaacgacccctaattgccatgatgaaatacatatttaagcctaa 37976584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 6156130 - 6156075
Alignment:
Q  77 tattcttataaacttcaataatatgaaagactaaaattaccattaaaattttatag 132  Q
    |||| ||||||||| ||||| |||| ||||||||||  ||||||||||||||||||    
T  6156130 tatttttataaactacaatattatggaagactaaaaaaaccattaaaattttatag 6156075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 56 - 151
Target Start/End: Original strand, 6449714 - 6449809
Alignment:
Q  56 aaaagtttgtaagataggaaatattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactc 151  Q
    |||||||| ||| ||||| | |||| ||| ||||| || || ||| ||| |||||||||| |||||||||||||| || | |||| ||||||||||    
T  6449714 aaaagtttttaaaatagggactatttttacaaactacattattataaaaaactaaaattatcattaaaattttatgggcattaaacttgaaaactc 6449809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 22593375 - 22593422
Alignment:
Q  103 aagactaaaattaccattaaaattttataggaactaaagttgaaaact 150  Q
    ||||||||||| ||||||||||||| |||| ||||||| |||||||||    
T  22593375 aagactaaaatcaccattaaaatttaatagaaactaaacttgaaaact 22593422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 53701853 - 53701814
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaag 40  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  53701853 taaacgacccctaattgcaaggatgaaatagatatttaag 53701814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1178098 - 1178056
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||||||| |||||| ||||||| ||||||||||||||||||    
T  1178098 taaacgacctctaattacaaggatgaaatacatatttaagcct 1178056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 11108227 - 11108265
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaa 39  Q
    ||||||| |||||||||||||||| ||||||||||||||    
T  11108227 taaacgatccctaattgcaaggatgaaatacatatttaa 11108265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 140
Target Start/End: Complemental strand, 14806168 - 14806134
Alignment:
Q  106 actaaaattaccattaaaattttataggaactaaa 140  Q
    |||||||||| ||||||||||||||||||||||||    
T  14806168 actaaaattatcattaaaattttataggaactaaa 14806134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 37976194 - 37976156
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaa 39  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  37976194 taaacgacctctaattgcaaggatgaaatacatatttaa 37976156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 52909292 - 52909254
Alignment:
Q  3 aacgacccctaattgcaaggatcaaatacatatttaagc 41  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  52909292 aacgacccctaattgcaaagatgaaatacatatttaagc 52909254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 53129547 - 53129505
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||||| |||||||||||| ||| ||||||||||||||||||    
T  53129547 taaacgatccctaattgcaatgataaaatacatatttaagcct 53129505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 147360 - 147319
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||||||||||||| | |||| |||||||||||||||||    
T  147360 taaacgacccctaattgtagggatgaaatacatatttaagcc 147319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 5369254 - 5369295
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||||||||| ||  ||||||||||||||||||||||||    
T  5369254 taaacgacccctacttataaggatcaaatacatatttaagcc 5369295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 54713648 - 54713615
Alignment:
Q  10 cctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||||||||||||| ||||||||||||||||||    
T  54713648 cctaattgcaaggatgaaatacatatttaagcct 54713615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 55866152 - 55866111
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||||||||||||||| |||  |||||||||||||||||    
T  55866152 taaacgacccctaattgcagggacgaaatacatatttaagcc 55866111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 16005879 - 16005843
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatattt 37  Q
    ||||||||||||||||  |||||||||||||||||||    
T  16005879 taaacgacccctaattataaggatcaaatacatattt 16005843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 52909651 - 52909683
Alignment:
Q  12 taattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||||||||| |||||||||||||||||||    
T  52909651 taattgcaaggatgaaatacatatttaagccta 52909683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 54087082 - 54087126
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||| ||| ||| ||||||||||||||| ||||    
T  54087082 taaacgacccctaattacaatgatgaaatacatatttaagtctaa 54087126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 54435484 - 54435528
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||| |||||||||||| |  ||||||||||||||||||||    
T  54435484 taaacgacacctaattgcaagcacgaaatacatatttaagcctaa 54435528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 3e-39; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 51471292 - 51471127
Alignment:
Q  69 ataggaaatattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggact 168  Q
    ||||||| ||||||||||||||| |||| | || | || |||||||| || ||||||||||||| ||||||| |||||||||||||||||||  ||||||    
T  51471292 ataggaactattcttataaactttaatattgtggaggagtaaaattatcaataaaattttatagaaactaaaattgaaaactcttaatttta-caggact 51471194  T
Q  169 aaaaaatatttaacactaaatttattgatttttctcaataccaaaatatagttcaatatagttaaag 235  Q
    ||||||||||||||||||||||||||||| ||||   || ||||||||||||||| ||| |||||||    
T  51471193 aaaaaatatttaacactaaatttattgatatttccatatgccaaaatatagttcagtattgttaaag 51471127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 20336871 - 20336778
Alignment:
Q  90 ttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-atatttaac 182  Q
    ||||||| |||| | ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||| || |||||||||| |||||||||    
T  20336871 ttcaatattatggaggactaaaattaccattaaaattttataaggactaaagttgaaaactcttgattttgtagggactaaaaacatatttaac 20336778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 172
Target Start/End: Complemental strand, 20314991 - 20314896
Alignment:
Q  77 tattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaa 172  Q
    |||| ||| ||| ||||||| |||| | |||||||||| |||||||||||||||| | ||||||||||||||||||| ||||| || |||||||||    
T  20314991 tattattacaaaattcaatattatggaggactaaaattgccattaaaattttataaggactaaagttgaaaactcttgattttgtagggactaaaa 20314896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 345
Target Start/End: Complemental strand, 51471076 - 51470999
Alignment:
Q  268 tcaaaggcttgtttattgtgaatcatcgttatttgactagtatgtgtgatttctgcgaattaattctcgtaccaaaca 345  Q
    ||||| ||||||||| |||||||||| ||||||||||||||  |||||||| ||||||||||| | ||||||||||||    
T  51471076 tcaaaagcttgtttagtgtgaatcattgttatttgactagttcgtgtgattcctgcgaattaagtatcgtaccaaaca 51470999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 13899562 - 13899504
Alignment:
Q  82 ttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaa 140  Q
    ||||||||| ||||| |||| | ||||||||||||||||||||||||||||||||||||    
T  13899562 ttataaactacaatattatggaggactaaaattaccattaaaattttataggaactaaa 13899504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19741279 - 19741321
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  19741279 taaacgacccctaattgcaaggatcaaatacatatttaagcct 19741321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 34142605 - 34142646
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  34142605 taaacgacccctaattgcaaggatcaaatacatatttaagcc 34142646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2796220 - 2796177
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  2796220 taaatgacccctaattgcaaggatcaaatacatatttaagccta 2796177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 34359403 - 34359328
Alignment:
Q  108 taaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-atatttaac 182  Q
    |||||||||||||||||||||||| | |||||| || ||||||| | ||||| ||||||||||||| |||||||||    
T  34359403 taaaattaccattaaaattttatatggactaaacttaaaaactcatgattttgtaaggactaaaaacatatttaac 34359328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 40033843 - 40033886
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  40033843 taaacgacccctaattgcaaggatgaaatacatatttaagccta 40033886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 33689423 - 33689381
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  33689423 taaacgacccctaattgcaaggatgaaatacatatttaagcct 33689381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 9294345 - 9294386
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  9294345 taaacgacccctaattgcaaggatgaaatacatatttaagcc 9294386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 40758188 - 40758147
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  40758188 taaacgacccctaattgcaaggatgaaatacatatttaagcc 40758147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 181
Target Start/End: Original strand, 50334692 - 50334805
Alignment:
Q  69 ataggaaatattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggact 168  Q
    ||||||| || | ||| ||||| ||||| | || ||||||||||||| ||||||||||||||||| | ||||||  ||||||| | ||||||||  ||||    
T  50334692 ataggaactaattttacaaactacaatattttggaagactaaaattatcattaaaattttatagggattaaagtaaaaaactcatgattttatagagact 50334791  T
Q  169 aaaaa-atatttaa 181  Q
    ||||| ||||||||    
T  50334792 aaaaatatatttaa 50334805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 23458366 - 23458410
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||    
T  23458366 taaacgacccataattgcaaggatgaaatacatatttaagcctaa 23458410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 33689766 - 33689810
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||    
T  33689766 taaacgacccctaattgcaaagatgaaatacatatttaagcctaa 33689810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 40758497 - 40758541
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||    
T  40758497 taaatgacccctaattgcaaggatgaaatacatatttaagcctaa 40758541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 51994273 - 51994313
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagc 41  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  51994273 taaacgatccctaattgcaaggatcaaatacatatttaagc 51994313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42342832 - 42342789
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||||||||||||| |||||| |||||||||||||||||||    
T  42342832 taaacgacccctaattgtaaggatgaaatacatatttaagccta 42342789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 51994005 - 51993962
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||||| |||||||||| |||||||||||||||||||||||    
T  51994005 taaacgacctctaattgcaaagatcaaatacatatttaagccta 51993962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 182
Target Start/End: Original strand, 28769571 - 28769675
Alignment:
Q  77 tattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-at 175  Q
    |||||||| ||||| ||||| |||| | ||| ||||| ||||||||||||||||| | ||| || ||||||||||  ||||||||| |||||||||| ||    
T  28769571 tattcttacaaactacaatattatggaggacaaaaatcaccattaaaattttataag-act-aatttgaaaactcggaattttatagggactaaaaacat 28769668  T
Q  176 atttaac 182  Q
    |||||||    
T  28769669 atttaac 28769675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 36150568 - 36150530
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaa 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  36150568 taaacgacccctaattgcaaggatgaaatacatatttaa 36150530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 182
Target Start/End: Original strand, 44446945 - 44447023
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-atatttaac 182  Q
    |||||||||||| ||||||||||||| || | |||| || ||||||| ||||| |||| |||||||||| |||||||||    
T  44446945 gactaaaattacaattaaaattttattgggattaaacttaaaaactcataattatatagggactaaaaacatatttaac 44447023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 52423083 - 52423017
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaa 171  Q
    |||||||||||||||| ||| |||||||| |||||| |||||||||| | ||||| || ||||||||    
T  52423083 gactaaaattaccattgaaactttatagggactaaacttgaaaactcgtgattttgtagggactaaa 52423017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3850514 - 3850555
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  3850514 taaacgacccctaattgcagggatgaaatacatatttaagcc 3850555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 36418075 - 36418116
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||||||||||| ||||||| |||||||||||||||||    
T  36418075 taaacgacccctaattacaaggatgaaatacatatttaagcc 36418116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 41558049 - 41558005
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||| |||||||||| || ||||||||||||||||||||    
T  41558049 taaacgacccataattgcaagaatgaaatacatatttaagcctaa 41558005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 9292284 - 9292245
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaag 40  Q
    ||||||| |||||||||||||||| |||||||||||||||    
T  9292284 taaacgatccctaattgcaaggatgaaatacatatttaag 9292245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9367782 - 9367739
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||||||||||||| | |||| |||||||||||||||||||    
T  9367782 taaacgacccctaattgtagggattaaatacatatttaagccta 9367739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19740964 - 19740921
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||| ||||||||||| | ||||||||||||||||||||||    
T  19740964 taaacgatccctaattgcatgaatcaaatacatatttaagccta 19740921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 42
Target Start/End: Original strand, 55052640 - 55052675
Alignment:
Q  7 acccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||||| |||||||||||||||||||||||||    
T  55052640 acccctaattacaaggatcaaatacatatttaagcc 55052675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 140
Target Start/End: Original strand, 16607666 - 16607700
Alignment:
Q  106 actaaaattaccattaaaattttataggaactaaa 140  Q
    |||||||||| ||||||||||||||||||||||||    
T  16607666 actaaaattatcattaaaattttataggaactaaa 16607700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 26463673 - 26463635
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaa 39  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  26463673 taaacgacccttaattgcaaggatgaaatacatatttaa 26463635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 26463973 - 26464015
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||||| | |||||||||||||| ||||||||||||||||||    
T  26463973 taaacgatctctaattgcaaggatgaaatacatatttaagcct 26464015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 182
Target Start/End: Complemental strand, 39340846 - 39340768
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggact-aaaaaatatttaac 182  Q
    |||||||||||||||||||| |||||||| |||||| || ||||||  | ||||| || ||||| |||| |||||||||    
T  39340846 gactaaaattaccattaaaactttatagggactaaacttaaaaactagtgattttgtagggactcaaaacatatttaac 39340768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 41989575 - 41989613
Alignment:
Q  3 aacgacccctaattgcaaggatcaaatacatatttaagc 41  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  41989575 aacgatccctaattgcaaggatgaaatacatatttaagc 41989613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 46474856 - 46474818
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaa 39  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  46474856 taaacgacccctaattgcaaagatgaaatacatatttaa 46474818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 46475167 - 46475205
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaa 39  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  46475167 taaacgacccctaattgtaaggatgaaatacatatttaa 46475205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 53756785 - 53756747
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaa 39  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  53756785 taaacgacccctaattgcaaagatgaaatacatatttaa 53756747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 53856448 - 53856486
Alignment:
Q  5 cgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||||||| ||||| |||||||||||||||||||||||    
T  53856448 cgacccctatttgcagggatcaaatacatatttaagcct 53856486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 162
Target Start/End: Complemental strand, 17268934 - 17268849
Alignment:
Q  77 tattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttata 162  Q
    |||| ||| ||||| |||||||||  ||||||||||||| |||||||||| |||| | |||| | || || |||| ||||||||||    
T  17268934 tatttttacaaactacaataatatagaagactaaaattatcattaaaattgtatatggactatacttaaacactcgtaattttata 17268849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 41558269 - 41558306
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatattta 38  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  41558269 taaacgacccctaattgcagggatgaaatacatattta 41558306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 53856052 - 53856015
Alignment:
Q  5 cgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||||| ||||| ||||||||||||||||||||||    
T  53856052 cgacccctatttgcagggatcaaatacatatttaagcc 53856015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 35712077 - 35712045
Alignment:
Q  9 ccctaattgcaaggatcaaatacatatttaagc 41  Q
    |||||||||||||||| ||||||||||||||||    
T  35712077 ccctaattgcaaggatgaaatacatatttaagc 35712045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 6e-19; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 29242654 - 29242722
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa 173  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||| || ||||||||||    
T  29242654 gactaaaattaccattaaaattttatagggactaaacttgaaaactcctaattttgtagggactaaaaa 29242722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11163410 - 11163453
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  11163410 taaacgacccctaattgcaaggatcaaatacatatttaagccta 11163453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16099411 - 16099453
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  16099411 taaacgacccctaattgcaaggatcaaatacatatttaagcct 16099453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 37284276 - 37284353
Alignment:
Q  106 actaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-atatttaac 182  Q
    |||||||| | ||||||||||||||||| |||||| || ||||||| ||||||| ||||||||||||| |||||||||    
T  37284276 actaaaatcatcattaaaattttatagggactaaacttaaaaactcataattttgtaaggactaaaaatatatttaac 37284353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 855640 - 855576
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggacta 169  Q
    ||||||||||||||||||||||||||||| |||||| || ||||||| | ||||| |||||||||    
T  855640 gactaaaattaccattaaaattttatagggactaaacttaaaaactcatgattttgtaaggacta 855576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 39498666 - 39498710
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  39498666 taaacgatccctaattgcaaggatcaaatacatatttaagcctaa 39498710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 44045389 - 44045433
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  44045389 taaacgacccctaattgcagggatcaaatacatatttaagcctaa 44045433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6657919 - 6657876
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  6657919 taaacgaccccaaattgcaaggatcaaatacatatttaagccta 6657876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 39423902 - 39423945
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  39423902 taaacgacccctaattgcaaggatgaaatacatatttaagccta 39423945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 3555291 - 3555249
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  3555291 taaacgacccctaattgcaaggatgaaatacatatttaagcct 3555249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36755475 - 36755517
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  36755475 taaacgacccctaattgcaaggatgaaatacatatttaagcct 36755517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 45556153 - 45556111
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  45556153 taaacgatccctaattgcaaggatcaaatacatatttaagcct 45556111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 45556434 - 45556476
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  45556434 taaacgacccctaattacaaggatcaaatacatatttaagcct 45556476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 146
Target Start/End: Complemental strand, 6191193 - 6191124
Alignment:
Q  77 tattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaa 146  Q
    |||||||| ||| | ||||| |||| | ||||||||||||||||||||||||||||| |||||| |||||    
T  6191193 tattcttacaaagtacaatattatggaggactaaaattaccattaaaattttatagggactaaacttgaa 6191124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 6658234 - 6658275
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  6658234 taaacgacctctaattgcaaggatcaaatacatatttaagcc 6658275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 173
Target Start/End: Complemental strand, 10077728 - 10077612
Alignment:
Q  56 aaaagtttgtaagataggaaatattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaa 155  Q
    ||||||||  || ||||| | |||| ||| ||||| ||||| |||||| || ||||||||||||||||| |||||||| |||||| |||||||||| | |    
T  10077728 aaaagttttcaaaatagggactattattacaaactacaatattatgaaggattaaaattaccattaaaa-tttatagggactaaacttgaaaactcatga 10077630  T
Q  156 ttttataaggactaaaaa 173  Q
    ||||  || |||||||||    
T  10077629 ttttgcaaagactaaaaa 10077612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15848475 - 15848519
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||| |||||| |||||||||||||    
T  15848475 taaacgacccctaattgcaaggatgaaatacttatttaagcctaa 15848519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25231235 - 25231278
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  25231235 taaacgacccctaattgcagggattaaatacatatttaagccta 25231278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 2318897 - 2318939
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||||||||||||||| |||||| ||||||||||||||||||    
T  2318897 taaacgacccctaattggaaggatgaaatacatatttaagcct 2318939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6588724 - 6588686
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaa 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  6588724 taaacgacccctaattgcaaggatgaaatacatatttaa 6588686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15848129 - 15848087
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  15848129 taaacgacccctaattgcaaggatgaaatacatatataagcct 15848087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 182
Target Start/End: Original strand, 24490645 - 24490723
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-atatttaac 182  Q
    |||||||||||| |||||||||||||||  |||||| || ||||| | ||||||| || |||||||||| |||||||||    
T  24490645 gactaaaattactattaaaattttatagagactaaacttaaaaacacataattttgtagggactaaaaacatatttaac 24490723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 182
Target Start/End: Complemental strand, 35954327 - 35954222
Alignment:
Q  77 tattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-at 175  Q
    |||||||| ||||| ||||| |||  | ||||||||||||||||||||||| ||||| |||||| || ||||||  | | |||||| |||||||||| ||    
T  35954327 tattcttacaaactacaatattattgaggactaaaattaccattaaaatttaatagggactaaactttaaaacttgtga-tttatagggactaaaaacat 35954229  T
Q  176 atttaac 182  Q
    |||||||    
T  35954228 atttaac 35954222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36382514 - 36382556
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||| ||||||||||||| ||||||||||||||||||    
T  36382514 taaacgacccttaattgcaaggatgaaatacatatttaagcct 36382556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 37895388 - 37895346
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||| ||||||||||||| ||||||||||||||||||    
T  37895388 taaacgacccttaattgcaaggatgaaatacatatttaagcct 37895346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 44044155 - 44044113
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||| ||||||||||||| |||||||||||||||||||||||    
T  44044155 taaaccacccctaattgcagggatcaaatacatatttaagcct 44044113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 9076454 - 9076495
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  9076454 taaacgacccctaattgcaagaataaaatacatatttaagcc 9076495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 10713110 - 10713151
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  10713110 taaacgacccttaattgcaaggatgaaatacatatttaagcc 10713151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16099096 - 16099055
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||| |||||||||||||||| ||||||||||||||||||||    
T  16099096 taaatgacccctaattgcaagaatcaaatacatatttaagcc 16099055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 25230143 - 25230102
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  25230143 taaacgacccctaattgcagggattaaatacatatttaagcc 25230102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 30632611 - 30632675
Alignment:
Q  86 aaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaact 150  Q
    ||||| ||||| |||  ||||||||||||||||||||||||||||||  |||||| || ||||||    
T  30632611 aaactacaatattatccaagactaaaattaccattaaaattttatagagactaaaattaaaaact 30632675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36382202 - 36382158
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||||    
T  36382202 taaacgaaccctaattgcaaggatgaaatacatacttaagcctaa 36382158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 44714148 - 44714191
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||    
T  44714148 taaacgacccctaattgcaaggatgaaa-acatatttaagcctaa 44714191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 105 - 148
Target Start/End: Complemental strand, 8794651 - 8794609
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaa 148  Q
    ||||||||||||||||||||||||||||| |||||| |||||||    
T  8794651 gactaaaattaccattaaaattttatagg-actaaacttgaaaa 8794609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 112 - 182
Target Start/End: Original strand, 17448888 - 17448959
Alignment:
Q  112 attaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-atatttaac 182  Q
    |||| |||||||||||||||  ||||||| || ||||||| |||||||||| ||| |||||| |||||||||    
T  17448888 attatcattaaaattttataaaaactaaacttaaaaactcataattttatagggattaaaaacatatttaac 17448959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 30669097 - 30669144
Alignment:
Q  103 aagactaaaattaccattaaaattttataggaactaaagttgaaaact 150  Q
    ||||||||||||||||||||||||||||||  |||||| || ||||||    
T  30669097 aagactaaaattaccattaaaattttatagagactaaaattaaaaact 30669144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 34448182 - 34448225
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||    
T  34448182 taaacaacccctaattgcaaggatgaaatacatgtttaagccta 34448225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 36480105 - 36480144
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaag 40  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  36480105 taaacgacccttaattgcaaggatgaaatacatatttaag 36480144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 30666688 - 30666734
Alignment:
Q  86 aaacttcaataatatgaaagactaaaattaccattaaaattttatag 132  Q
    ||||| ||||| |||  ||||||||||||||||||||||||||||||    
T  30666688 aaactacaatattattcaagactaaaattaccattaaaattttatag 30666734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 34447854 - 34447812
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||    
T  34447854 taaatgacccctaattacaaggatgaaatacatatttaagcct 34447812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 37895734 - 37895772
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaa 39  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  37895734 taaacgacccataattgcaaggatgaaatacatatttaa 37895772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 39498351 - 39498317
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatat 35  Q
    |||||||||||||||| ||||||||||||||||||    
T  39498351 taaacgacccctaattacaaggatcaaatacatat 39498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 11163095 - 11163054
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||||  ||||||||| |||||||||||||||||||||    
T  11163095 taaacgacctttaattgcaaagatcaaatacatatttaagcc 11163054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 132
Target Start/End: Original strand, 30666769 - 30666798
Alignment:
Q  103 aagactaaaattaccattaaaattttatag 132  Q
    ||||||||||||||||||||||||||||||    
T  30666769 aagactaaaattaccattaaaattttatag 30666798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30729662 - 30729621
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||||  |||||||||||||| |||||||||||||||||    
T  30729662 taaacgacgtctaattgcaaggatgaaatacatatttaagcc 30729621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 2318192 - 2318160
Alignment:
Q  9 ccctaattgcaaggatcaaatacatatttaagc 41  Q
    |||||||||||||||| ||||||||||||||||    
T  2318192 ccctaattgcaaggatgaaatacatatttaagc 2318160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10712764 - 10712720
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    ||||||| |||||||||||||||| ||||||||| ||||| ||||    
T  10712764 taaacgaaccctaattgcaaggatgaaatacatacttaagtctaa 10712720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 182
Target Start/End: Original strand, 11711254 - 11711318
Alignment:
Q  119 ttaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-atatttaac 182  Q
    ||||||||||||||| |||||| |||||| ||| | |||||||||  |||||||| |||||||||    
T  11711254 ttaaaattttatagggactaaacttgaaagctcgtgattttataaaaactaaaaatatatttaac 11711318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 36479759 - 36479719
Alignment:
Q  1 taaacgacccctaattgc-aaggatcaaatacatatttaag 40  Q
    |||||||||||||||||| |||||| |||||||||||||||    
T  36479759 taaacgacccctaattgcaaaggatgaaatacatatttaag 36479719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 133
Target Start/End: Original strand, 39293203 - 39293231
Alignment:
Q  105 gactaaaattaccattaaaattttatagg 133  Q
    |||||||||||||||||||||||||||||    
T  39293203 gactaaaattaccattaaaattttatagg 39293231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 46; Significance: 4e-17; HSPs: 3)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 77 - 181
Target Start/End: Original strand, 152235 - 152340
Alignment:
Q  77 tattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggacta-aaaaat 175  Q
    |||||||| || || ||||| |||||| |||||||||||||||||||||||||||   |||||| ||||||| || |||||||||| |||||| ||| ||    
T  152235 tattcttacaatctacaatattatgaaggactaaaattaccattaaaattttataaagactaaacttgaaaattcataattttatagggactacaaacat 152334  T
Q  176 atttaa 181  Q
    ||||||    
T  152335 atttaa 152340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 139713 - 139669
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  139713 taaacgacccctaattgcaaggatcaaatacatatttaatcctaa 139669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 140028 - 140066
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaa 39  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  140028 taaacaacccctaattgcaaggatcaaatacatatttaa 140066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 188
Target Start/End: Original strand, 26938956 - 26939040
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaa-aatatttaacactaaa 188  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||  | |||||||| |||||||||  ||||||||| |||||    
T  26938956 gactaaaattaccattaaaattttatagggactaaacttgaaaacttatgattttatagggactaaaagcatatttaaccctaaa 26939040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 12198991 - 12198948
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  12198991 taaacgacccctaattgcaaggatcaaatacatatttaagccta 12198948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 12443419 - 12443376
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  12443419 taaacgacccctaattgcaaggatcaaatacatatttaagccta 12443376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23663901 - 23663944
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  23663901 taaacgacccctaattgcaaggatcaaatacatatttaagccta 23663944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8316975 - 8317017
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8316975 taaacgacccctaattgcaaggatcaaatacatatttaagcct 8317017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 20386817 - 20386859
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  20386817 taaacgacccctaattgcaaggatcaaatacatatttaagcct 20386859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 182
Target Start/End: Original strand, 24916134 - 24916208
Alignment:
Q  109 aaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-atatttaac 182  Q
    ||||||||||||||||||||||||| |||||| || ||||||| | |||||||| |||||||||| |||||||||    
T  24916134 aaaattaccattaaaattttatagggactaaacttaaaaactcatgattttatatggactaaaaacatatttaac 24916208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 77 - 162
Target Start/End: Complemental strand, 15966529 - 15966444
Alignment:
Q  77 tattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttata 162  Q
    |||||||| ||| | ||||| ||||||||||||||| |||||||||||||| |||| || |||| |||||||||| | ||||||||    
T  15966529 tattcttacaaaatgcaatagtatgaaagactaaaagtaccattaaaatttaatagcaaataaacttgaaaactcatgattttata 15966444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 20385609 - 20385568
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  20385609 taaacgacccctaattgcaaggatcaaatacatatttaagcc 20385568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 38956059 - 38956100
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  38956059 taaacgacccctaattgcaaggatcaaatacatatttaagcc 38956100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 1425094 - 1425050
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  1425094 taaacgacccctaattgcaaggatcaaatacatatttaaacctaa 1425050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 12273240 - 12273284
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  12273240 taaacgacccctaattgcaaggatcaaatacatatttaaacctaa 12273284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16388624 - 16388580
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  16388624 taaacgacccctaattgcaaggatgaaatacatatttaagcctaa 16388580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 23698631 - 23698675
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  23698631 taaacgacccctaattacaaggatcaaatacatatttaagcctaa 23698675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 172
Target Start/End: Original strand, 26938648 - 26938764
Alignment:
Q  56 aaaagtttgtaagataggaaatattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaa 155  Q
    ||||||||  || ||||| | |||||||| ||||| | | | |||| | ||| ||||||||||||||||||||||||| |||||| |||||||||  | |    
T  26938648 aaaagttttcaaaatagggactattcttacaaactactaaattatggaggacaaaaattaccattaaaattttatagggactaaacttgaaaacttatga 26938747  T
Q  156 ttttataaggactaaaa 172  Q
    ||||||| |||||||||    
T  26938748 ttttatagggactaaaa 26938764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 33357539 - 33357495
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  33357539 taaacgacccctaattgcaaggatgaaatacatatttaagcctaa 33357495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 39071717 - 39071676
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  39071717 taaacgacccctaattgcaaggatgaaatacatatttaagcc 39071676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7313392 - 7313436
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||    
T  7313392 taaacgacccctatttgcagggatcaaatacatatttaagcctaa 7313436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 13186446 - 13186490
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||    
T  13186446 taaacgacccctaattgcaaggatgaaatatatatttaagcctaa 13186490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 140
Target Start/End: Complemental strand, 33038339 - 33038255
Alignment:
Q  56 aaaagtttgtaagataggaaatattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaa 140  Q
    |||||||| ||| ||||||| |||||||| ||||| ||||| |||| | || |||||||  ||||||||||| ||||||||||||    
T  33038339 aaaagtttttaaaataggaactattcttacaaactgcaatattatggaggattaaaattttcattaaaatttaataggaactaaa 33038255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 36186451 - 36186495
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||    
T  36186451 taaacgacccttaattgcaaggatgaaatacatatttaagcctaa 36186495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 12272959 - 12272920
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaag 40  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  12272959 taaacgatccctaattgcaaggatcaaatacatatttaag 12272920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 23663586 - 23663543
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    |||||||||||||||||||||||| |||| ||||||||||||||    
T  23663586 taaacgacccctaattgcaaggatgaaatgcatatttaagccta 23663543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 40318005 - 40317966
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaag 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  40318005 taaacgacccctaattgcaaggatgaaatacatatttaag 40317966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 4995043 - 4995085
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||| ||||||||||||||||||| ||||||||||||||||||    
T  4995043 taaatgacccctaattgcaaggatgaaatacatatttaagcct 4995085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7306440 - 7306398
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  7306440 taaacgacccctatttgcagggatcaaatacatatttaagcct 7306398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8316694 - 8316652
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  8316694 taaacgacccctaattgcaaggatgaaatgcatatttaagcct 8316652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 182
Target Start/End: Complemental strand, 12596929 - 12596851
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-atatttaac 182  Q
    ||||||||||||||||||||||||||||| |||||| || ||||||  | ||||| ||  ||||||||| |||||||||    
T  12596929 gactaaaattaccattaaaattttatagggactaaacttaaaaacttatgattttgtagagactaaaaacatatttaac 12596851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13186101 - 13186059
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||||| |||||||||||||||| ||||||||||||||||||    
T  13186101 taaacgatccctaattgcaaggatgaaatacatatttaagcct 13186059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 182
Target Start/End: Complemental strand, 17153613 - 17153535
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-atatttaac 182  Q
    ||||||||||||||||||||||| ||||| |||||  || ||||||| | ||||| || |||||||||| |||||||||    
T  17153613 gactaaaattaccattaaaatttcatagggactaagcttaaaaactcatgattttgtagggactaaaaacatatttaac 17153535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 22915745 - 22915787
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||||| ||||| |||||||||||||||||||||||||||||    
T  22915745 taaacgatccctagttgcaaggatcaaatacatatttaagcct 22915787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 23698342 - 23698308
Alignment:
Q  8 cccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||||||||||||||||||||||||||||||    
T  23698342 cccctaattgcaaggatcaaatacatatttaagcc 23698308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 24292247 - 24292341
Alignment:
Q  79 ttcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa 173  Q
    |||||| |||| |||||  |||||| |||||||||||| |||||||||| ||||| |||||| |||||| ||  | ||||| || ||||||||||    
T  24292247 ttcttacaaacatcaattttatgaaggactaaaattacaattaaaatttaatagggactaaacttgaaagcttgtgattttttagggactaaaaa 24292341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 38862950 - 38862988
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaa 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  38862950 taaacgacccctaattgcaaggatgaaatacatatttaa 38862988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 40318351 - 40318393
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||| |||||||||||||||||| ||||||||||||||||||    
T  40318351 taaacaacccctaattgcaaggatgaaatacatatttaagcct 40318393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 16388913 - 16388954
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||| ||||||||||||||||||| |||||||||||||||||    
T  16388913 taaatgacccctaattgcaaggatgaaatacatatttaagcc 16388954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 34685644 - 34685685
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||| |||||||||||||||| |||||||||||||||||    
T  34685644 taaacgatccctaattgcaaggataaaatacatatttaagcc 34685685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 38955744 - 38955703
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||| ||| ||||||||||||||||||||||||||||||    
T  38955744 taaacgatccccaattgcaaggatcaaatacatatttaagcc 38955703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 16483821 - 16483773
Alignment:
Q  103 aagactaaaattaccattaaaattttataggaactaaagttgaaaactc 151  Q
    ||||||||||||||||||||||||||| ||| |||||| || |||||||    
T  16483821 aagactaaaattaccattaaaattttacagggactaaacttaaaaactc 16483773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 30712103 - 30712143
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagc 41  Q
    |||||| |||||||| |||||||||||||||||||||||||    
T  30712103 taaacggcccctaatcgcaaggatcaaatacatatttaagc 30712143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 30719880 - 30719920
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagc 41  Q
    |||||| |||||||| |||||||||||||||||||||||||    
T  30719880 taaacggcccctaatcgcaaggatcaaatacatatttaagc 30719920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 39072028 - 39072072
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||| | ||||||||||| ||||||||||||||||||||    
T  39072028 taaacgacccttgattgcaaggatgaaatacatatttaagcctaa 39072072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 39344686 - 39344630
Alignment:
Q  77 tattcttataaacttcaataatatgaaagactaaaattaccattaaaattttatagg 133  Q
    |||||||| ||||| ||||| |||| | ||||||| |||||||||||||||||||||    
T  39344686 tattcttacaaactacaatattatggaggactaaagttaccattaaaattttatagg 39344630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 105 - 140
Target Start/End: Complemental strand, 2414946 - 2414911
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaa 140  Q
    ||||||||||||||||||||||||||||| ||||||    
T  2414946 gactaaaattaccattaaaattttatagggactaaa 2414911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 4405738 - 4405700
Alignment:
Q  3 aacgacccctaattgcaaggatcaaatacatatttaagc 41  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  4405738 aacgacccctaattgcaagaatgaaatacatatttaagc 4405700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 182
Target Start/End: Original strand, 17157070 - 17157148
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-atatttaac 182  Q
    ||||||||||||||||||||||| ||||| |||||  || |||| || | ||||| || |||||||||| |||||||||    
T  17157070 gactaaaattaccattaaaatttcatagggactaagtttaaaaaatcatgattttgtagggactaaaaacatatttaac 17157148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 151
Target Start/End: Complemental strand, 30743967 - 30743921
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactc 151  Q
    ||||||||||| ||||||| ||||||||| |||||| ||||||||||    
T  30743967 gactaaaattaacattaaagttttataggtactaaatttgaaaactc 30743921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 42024078 - 42024144
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaa 171  Q
    ||||||||||| |||||||||||||| || |||||| |  ||||||| | ||||| |||||||||||    
T  42024078 gactaaaattagcattaaaattttatggggactaaactcaaaaactcgtgattttgtaaggactaaa 42024144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 4406047 - 4406088
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||| |||||||||| ||||||| |||||||||||||||||    
T  4406047 taaacaacccctaattacaaggatgaaatacatatttaagcc 4406088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30459412 - 30459371
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||| |||||||| |||||| |||||||||||||||||    
T  30459412 taaacgacgcctaattgtaaggatgaaatacatatttaagcc 30459371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 31608900 - 31608941
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||||| ||||||||||||| |||||| ||||||||||    
T  31608900 taaacgacccttaattgcaaggatgaaatacttatttaagcc 31608941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 33695197 - 33695140
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttata 162  Q
    ||||||||||| ||||||| |||||||   |||||| |||||||||| ||||||||||    
T  33695197 gactaaaattatcattaaagttttataaagactaaacttgaaaactcataattttata 33695140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 45
Target Start/End: Complemental strand, 34060519 - 34060486
Alignment:
Q  12 taattgcaaggatcaaatacatatttaagcctaa 45  Q
    ||||||||||||| ||||||||||||||||||||    
T  34060519 taattgcaaggatgaaatacatatttaagcctaa 34060486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 38862659 - 38862618
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||| ||| ||||||||||||| |||||||||||||||||    
T  38862659 taaacggcccttaattgcaaggatgaaatacatatttaagcc 38862618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 42803605 - 42803646
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||||  |||||||||||||| |||||||||||||||||    
T  42803605 taaacgacttctaattgcaaggatgaaatacatatttaagcc 42803646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1425408 - 1425448
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagc 41  Q
    ||||||||| |||||| ||||||||||||| ||||||||||    
T  1425408 taaacgacctctaattacaaggatcaaatatatatttaagc 1425448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 4994690 - 4994654
Alignment:
Q  9 ccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  4994690 ccctaattgcaacgatgaaatacatatttaagcctaa 4994654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7295314 - 7295358
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    ||||||| || ||||||||||||| |||||||||||||| |||||    
T  7295314 taaacgatccataattgcaaggataaaatacatatttaaacctaa 7295358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 9065763 - 9065799
Alignment:
Q  7 acccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||||||||||||||||  |||||||||||||||||    
T  9065763 acccctaattgcaaggatggaatacatatttaagcct 9065799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30710897 - 30710853
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    ||||| ||| |||||||||| |||||||||||||||||| |||||    
T  30710897 taaacaacctctaattgcaaagatcaaatacatatttaaacctaa 30710853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 6e-16; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28770910 - 28770867
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  28770910 taaacgacccctaattgcaaggatcaaatacatatttaagccta 28770867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 3528914 - 3528872
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  3528914 taaacgacccctaattgcaaggatcaaatacatatttaagcct 3528872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 11761790 - 11761748
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  11761790 taaacgacccctaattgcaaggatcaaatacatatttaagcct 11761748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 11762104 - 11762146
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  11762104 taaacgacccctaattgcaaggatcaaatacatatttaagcct 11762146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 24547512 - 24547554
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  24547512 taaacgacccctaattgcaaggatcaaatacatatttaagcct 24547554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 26724212 - 26724118
Alignment:
Q  79 ttcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa 173  Q
    |||||||||| | ||||  |||| | ||||||||||||||||||||||||||||| |||||| | |||||||| | ||||| || ||||||||||    
T  26724212 ttcttataaattacaattctatggacgactaaaattaccattaaaattttatagggactaaactcgaaaactcgtgattttgtagggactaaaaa 26724118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3529229 - 3529270
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  3529229 taaacgacccctaattgcaaggatcaaatacatatttaagcc 3529270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 5459203 - 5459272
Alignment:
Q  78 attcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaa 147  Q
    |||||||||||||  |||| |||||| ||||||| ||||||||||||||||||||| |||||| ||||||    
T  5459203 attcttataaactataatattatgaaggactaaatttaccattaaaattttatagggactaaacttgaaa 5459272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27587189 - 27587148
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  27587189 taaacgacccctaattgcaaggatcaaatacatatttaagcc 27587148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 27587502 - 27587543
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  27587502 taaacgacccctaattgcaaggatcaaatacatatttaagcc 27587543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5993930 - 5993886
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  5993930 taaacgacccctaattgcaaggatgaaatacatatttaagcctaa 5993886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6150807 - 6150851
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  6150807 taaacgacccctaattgcaaggatgaaatacatatttaagcctaa 6150851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 14194464 - 14194420
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  14194464 taaacgacccctaattgcaaggatgaaatacatatttaagcctaa 14194420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 153
Target Start/End: Complemental strand, 38607399 - 38607323
Alignment:
Q  77 tattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactctt 153  Q
    |||||| | ||||| ||||| |||||| |||||||||||| ||||||||||||||| ||||||| || |||||||||    
T  38607399 tattctaaaaaactacaatattatgaaggactaaaattacaattaaaattttatagaaactaaacttaaaaactctt 38607323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 3746749 - 3746694
Alignment:
Q  104 agactaaaattaccattaaaattttataggaactaaagttgaaaactcttaatttt 159  Q
    |||||||||||| |||||||||||||||||||||||| || ||||||| |||||||    
T  3746749 agactaaaattagcattaaaattttataggaactaaatttaaaaactcgtaatttt 3746694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20814522 - 20814565
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  20814522 taaacgacccctaattgcaaggatgaaatacatatttaagccta 20814565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 20840574 - 20840531
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  20840574 taaacgacccctaattgcaaggatgaaatacatatttaagccta 20840531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6150495 - 6150453
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  6150495 taaacgacccctaattgcaaggatgaaatacatatttaagcct 6150453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16157242 - 16157284
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  16157242 taaacgacccctaattgcaaggatgaaatacatatttaagcct 16157284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 18247463 - 18247505
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  18247463 taaacgacccctaattgcaaggatgaaatacatatttaagcct 18247505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 24547216 - 24547174
Alignment:
Q  3 aacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  24547216 aacgacccctaattgcaaggatcaagtacatatttaagcctaa 24547174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 5024060 - 5024019
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  5024060 taaacgacccctaattgcaaggatgaaatacatatttaagcc 5024019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 17202786 - 17202827
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  17202786 taaacgacccctaattgcaaggatgaaatacatatttaagcc 17202827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 28771225 - 28771266
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  28771225 taaacgacccctaattacaaggatcaaatacatatttaagcc 28771266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13962905 - 13962861
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||    
T  13962905 taaacgacccctaattgcaaggataaaatatatatttaagcctaa 13962861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18247127 - 18247087
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagc 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  18247127 taaacgacccctaattgcaaggatgaaatacatatttaagc 18247087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19892349 - 19892305
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  19892349 taaacgacccctaattgcaaggatgaaatacatatttaagtctaa 19892305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 32242283 - 32242239
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||| |||||||||||||| |||||    
T  32242283 taaacgacccctaattgcaaggatgaaatacatatttaaccctaa 32242239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 36235827 - 36235775
Alignment:
Q  107 ctaaaattaccattaaaattttataggaactaaagttgaaaactcttaatttt 159  Q
    ||||||||||| ||||||||||||||||| |||| |||||||||| |||||||    
T  36235827 ctaaaattacccttaaaattttataggaattaaatttgaaaactcataatttt 36235775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38442454 - 38442494
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagc 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  38442454 taaacgacccctaattgcaaggatgaaatacatatttaagc 38442494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20840824 - 20840867
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||||||||||||| |||||| |||||||||||||||||||    
T  20840824 taaacgacccctaattgtaaggatgaaatacatatttaagccta 20840867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28269463 - 28269420
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    |||||||||||||||||||| ||| |||||||||||||||||||    
T  28269463 taaacgacccctaattgcaatgatgaaatacatatttaagccta 28269420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 35512501 - 35512540
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaag 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  35512501 taaacgacccctaattgcaaggatgaaatacatatttaag 35512540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 38475386 - 38475429
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    |||||||||||||||||||||||| |||| ||||||||||||||    
T  38475386 taaacgacccctaattgcaaggatgaaatgcatatttaagccta 38475429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 39453341 - 39453302
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaag 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  39453341 taaacgacccctaattgcaaggatgaaatacatatttaag 39453302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 5024405 - 5024443
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaa 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  5024405 taaacgacccctaattgcaaggatgaaatacatatttaa 5024443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11740728 - 11740690
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaa 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  11740728 taaacgacccctaattgcaaggatgaaatacatatttaa 11740690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18670243 - 18670201
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||||||||||| |||||||||| ||||||||||||||||||    
T  18670243 taaacgacccctacttgcaaggatgaaatacatatttaagcct 18670201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 32242628 - 32242670
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||| |||||||||||||||||| ||||||||||||||||||    
T  32242628 taaacaacccctaattgcaaggatgaaatacatatttaagcct 32242670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 182
Target Start/End: Complemental strand, 35270643 - 35270565
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-atatttaac 182  Q
    ||||||||||  || ||||| |||||||| ||| |||||||||||||| |||||| || |||||||||| |||||||||    
T  35270643 gactaaaattttcaataaaaatttatagggactgaagttgaaaactctcaattttgtatggactaaaaacatatttaac 35270565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 38948647 - 38948553
Alignment:
Q  56 aaaagtttgtaagataggaaatattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaact 150  Q
    |||||||| ||| ||| ||| || ||||||||||| | | | |||||| ||||||||||| |||||||||||||||   |||||| |||||||||    
T  38948647 aaaagtttttaaaatatgaactaatcttataaactactaaattatgaaggactaaaattatcattaaaattttatatagactaaatttgaaaact 38948553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 182
Target Start/End: Original strand, 39058522 - 39058628
Alignment:
Q  77 tattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-at 175  Q
    |||||||| ||||| ||||  |||| | |||||||||||||||||||||||||||||   |||| || ||||||  | |||||||| ||| |||||| ||    
T  39058522 tattcttacaaactacaatgttatggaggactaaaattaccattaaaattttataggggttaaacttaaaaacttgtgattttatagggattaaaaacat 39058621  T
Q  176 atttaac 182  Q
    |||||||    
T  39058622 atttaac 39058628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 39453686 - 39453728
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||| ||||||||||||||||||| ||||||||||||||||||    
T  39453686 taaatgacccctaattgcaaggatgaaatacatatttaagcct 39453728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 42265776 - 42265734
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  42265776 taaacgacccctaattgcagggatgaaatacatatttaagcct 42265734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 43159201 - 43159239
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaa 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  43159201 taaacgacccctaattgcaaggatgaaatacatatttaa 43159239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 186806 - 186847
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  186806 taaacgacctctaattgcaaggatgaaatacatatttaagcc 186847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 27937090 - 27937053
Alignment:
Q  7 acccctaattgcaaggatcaaatacatatttaagccta 44  Q
    |||||||||||||||||| |||||||||||||||||||    
T  27937090 acccctaattgcaaggatgaaatacatatttaagccta 27937053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 8322791 - 8322827
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatattt 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  8322791 taaacgacccctaattgcaaggatgaaatacatattt 8322827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 16156896 - 16156856
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagc 41  Q
    ||||||||||||||||||||| || ||||||||||||||||    
T  16156896 taaacgacccctaattgcaagtatgaaatacatatttaagc 16156856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 19517994 - 19518034
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagc 41  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  19517994 taaactacccctaattgcaaggatgaaatacatatttaagc 19518034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20814177 - 20814133
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    ||||||||| ||||||| |||||| ||||||||||||||||||||    
T  20814177 taaacgacctctaattgtaaggatgaaatacatatttaagcctaa 20814133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35512189 - 35512145
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||| ||||||||||||| |||||||||||||| |||||    
T  35512189 taaacgacccttaattgcaaggatgaaatacatatttaaacctaa 35512145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 19892695 - 19892734
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaag 40  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  19892695 taaacgacctctaattgcaaggatgaaatacatatttaag 19892734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28269767 - 28269809
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    |||||||||||||||||||| ||| |||||||||||||||||||    
T  28269767 taaacgacccctaattgcaa-gatgaaatacatatttaagccta 28269809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29646403 - 29646360
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||    
T  29646403 taaaagacccctaattacaaggataaaatacatatttaagccta 29646360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 37992675 - 37992714
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaag 40  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  37992675 taaacgacccctaattgcatggatgaaatacatatttaag 37992714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 11047823 - 11047861
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaa 39  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  11047823 taaacgacccctacttgcaaggatgaaatacatatttaa 11047861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 13362615 - 13362653
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaa 39  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  13362615 taaacgacccctaattgcaatgatgaaatacatatttaa 13362653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16083330 - 16083372
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||||| || ||||||||||||| ||||||||||||||||||    
T  16083330 taaacgatccttaattgcaaggatgaaatacatatttaagcct 16083372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 171
Target Start/End: Complemental strand, 16089760 - 16089694
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaa 171  Q
    |||||||||||| ||||||||||||| || |||||| || ||||||| ||| | |||| ||||||||    
T  16089760 gactaaaattacaattaaaattttattgggactaaacttaaaaactcataactatatagggactaaa 16089694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 17202440 - 17202398
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||||||||||||||| |||||| ||||| ||||||||||||    
T  17202440 taaacgacccctaattggaaggatgaaatatatatttaagcct 17202398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 21257548 - 21257586
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaa 39  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  21257548 taaacgacccctaattgcagggatgaaatacatatttaa 21257586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 21265529 - 21265571
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||| |||||| |||||| ||||||||||||||||||    
T  21265529 taaacgacccttaattgtaaggatgaaatacatatttaagcct 21265571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 27937386 - 27937424
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaa 39  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  27937386 taaacgacccataattgcaaggatgaaatacatatttaa 27937424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 35920571 - 35920612
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||||||||||||| | ||| |||||||||||||||||    
T  35920571 taaacgacccctaattgctatgatgaaatacatatttaagcc 35920612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 2299326 - 2299298
Alignment:
Q  103 aagactaaaattaccattaaaattttata 131  Q
    |||||||||||||||||||||||||||||    
T  2299326 aagactaaaattaccattaaaattttata 2299298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11741904 - 11741944
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagc 41  Q
    |||| ||||||||||| ||||||| ||||||||||||||||    
T  11741904 taaatgacccctaattacaaggatgaaatacatatttaagc 11741944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37991240 - 37991196
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    ||||||||||||||||||| |||| || | |||||||||||||||    
T  37991240 taaacgacccctaattgcagggatgaatttcatatttaagcctaa 37991196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 182
Target Start/End: Original strand, 17016 - 17094
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-atatttaac 182  Q
    ||||||||||||||||||||||||||||| | ||||  ||||||||| | |||||||| |||||||||| |||||||||    
T  17016 gactaaaattaccattaaaattttatagggattaaacctgaaaactcgtgattttatagggactaaaaacatatttaac 17094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 2128 - 2170
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  2128 taaacgacccctaattgcaaggatcaaatacatatttaagcct 2170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 1808 - 1767
Alignment:
Q  3 aacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  1808 aacgacccctaattgcaaggatcaaatacatatttaagccta 1767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 25647925 - 25647883
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  25647925 taaacgacccctaattgcaaggatcaaatacatatttaagcct 25647883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 26024779 - 26024820
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  26024779 taaacgacccctaattgcaaggatcaaatacatatttaagcc 26024820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 23209714 - 23209758
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  23209714 taaacgacccctaattgcaaggatgaaatacatatttaagcctaa 23209758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 30711714 - 30711758
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  30711714 taaacgacccctaattgcaaggatgaaatacatatttaagcctaa 30711758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35473672 - 35473628
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  35473672 taaacgacccctaattgcaaggattaaatacatatttaagcctaa 35473628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 43759209 - 43759253
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  43759209 taaacgacccctaattgcaaggatgaaatacatatttaagcctaa 43759253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19515860 - 19515817
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  19515860 taaacgacccctaattgcaaggatgaaatacatatttaagccta 19515817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36694323 - 36694280
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  36694323 taaacgacccctaattgcaaggatgaaatacatatttaagccta 36694280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36710424 - 36710381
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  36710424 taaacgacccctaattgcaaggatgaaatacatatttaagccta 36710381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 47999479 - 47999522
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  47999479 taaacgacccctaattacaaggatcaaatacatatttaagccta 47999522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 17661893 - 17661851
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  17661893 taaacgacccctaattgcaaggatgaaatacatatttaagcct 17661851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26024464 - 26024422
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  26024464 taaacgacccctaattgcaagaatcaaatacatatttaagcct 26024422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 183262 - 183221
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  183262 taaacgacccctaattgtaaggatcaaatacatatttaagcc 183221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6367603 - 6367562
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  6367603 taaacgacccctaattgcaaggatgaaatacatatttaagcc 6367562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 24009616 - 24009575
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  24009616 taaacgacccctaattgcaaggatgaaatacatatttaagcc 24009575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 34464490 - 34464449
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  34464490 taaacgacccctaattgcaaggatgaaatacatatttaagcc 34464449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 34850452 - 34850493
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  34850452 taaacgacccctaattgcaaggattaaatacatatttaagcc 34850493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 40772847 - 40772888
Alignment:
Q  2 aaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  40772847 aaacgacccctaattgcaaggatgaaatacatatttaagcct 40772888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 47999164 - 47999123
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  47999164 taaacgatccctaattgcaaggatcaaatacatatttaagcc 47999123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13914109 - 13914065
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||    
T  13914109 taaacgacccctaattgcaaggatgaaatacacatttaagcctaa 13914065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 20986005 - 20985957
Alignment:
Q  103 aagactaaaattaccattaaaattttataggaactaaagttgaaaactc 151  Q
    ||||||||||||||||||||||||||||||| |||||| || |||||||    
T  20986005 aagactaaaattaccattaaaattttatagggactaaatttaaaaactc 20985957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34464836 - 34464880
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||    
T  34464836 taaacaacccctaattgcaaggatgaaatacatatttaagcctaa 34464880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35152384 - 35152340
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||    
T  35152384 taaacgacctctaattgcaaggatgaaatacatatttaagcctaa 35152340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 35152717 - 35152757
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagc 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  35152717 taaacgacccctaattgcaaggatgaaatacatatttaagc 35152757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37578233 - 37578189
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||||||||||||||||| |||||||||||||| |||||    
T  37578233 taaacgacccctaattgcaaggatgaaatacatatttaaacctaa 37578189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5734051 - 5734008
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    |||||||||||||||||||||||  |||||||||||||||||||    
T  5734051 taaacgacccctaattgcaaggacgaaatacatatttaagccta 5734008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41098774 - 41098731
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||||||||||||||||| || |||||||||||||||||||    
T  41098774 taaacgacccctaattgcaagaatgaaatacatatttaagccta 41098731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42533065 - 42533022
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    |||||||||||||||||||||||| |||||||||||||| ||||    
T  42533065 taaacgacccctaattgcaaggatgaaatacatatttaaaccta 42533022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 181
Target Start/End: Original strand, 50919371 - 50919449
Alignment:
Q  103 aagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-atatttaa 181  Q
    ||||||||||||||||||||||||||||||| |||||| || |||| |  | ||||| ||||||||||||| ||||||||    
T  50919371 aagactaaaattaccattaaaattttatagggactaaactt-aaaatttatgattttgtaaggactaaaaacatatttaa 50919449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 6367949 - 6367991
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||| ||||||||||||| ||||||||||||||||||    
T  6367949 taaacgacccttaattgcaaggatgaaatacatatttaagcct 6367991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7820995 - 7820953
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||| ||||||||||||||||||| ||||||||||||||||||    
T  7820995 taaaggacccctaattgcaaggatgaaatacatatttaagcct 7820953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 17662237 - 17662279
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||||||||| |||||||||||| ||||||||||||||||||    
T  17662237 taaacgaccccaaattgcaaggatgaaatacatatttaagcct 17662279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 17692572 - 17692610
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaa 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  17692572 taaacgacccctaattgcaaggatgaaatacatatttaa 17692610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 19017670 - 19017628
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||| |||||||||||||||||| ||||||||||||||||||    
T  19017670 taaacaacccctaattgcaaggatgaaatacatatttaagcct 19017628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 37578579 - 37578621
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||||||||| |||||||||||| ||||||||||||||||||    
T  37578579 taaacgacccccaattgcaaggatgaaatacatatttaagcct 37578621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 40435386 - 40435348
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaa 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  40435386 taaacgacccctaattgcaaggatgaaatacatatttaa 40435348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 183586 - 183623
Alignment:
Q  8 cccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  183586 cccctaattacaaggatcaaatacatatttaagcctaa 183623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 6518183 - 6518224
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||||||||||||||||||| ||||| |||||||||||    
T  6518183 taaacgacccctaattgcaaggatgaaatatatatttaagcc 6518224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30711368 - 30711327
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||| |||||||||||||||||| |||||||||||||||||    
T  30711368 taaacaacccctaattgcaaggatgaaatacatatttaagcc 30711327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 34849052 - 34849011
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||| ||||||||||||||||||| |||||||||||||||||    
T  34849052 taaaagacccctaattgcaaggattaaatacatatttaagcc 34849011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 40772548 - 40772507
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  40772548 taaacgacccataattgcaaggatgaaatacatatttaagcc 40772507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 46899102 - 46899061
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  46899102 taaacgacccctaattgcatggatgaaatacatatttaagcc 46899061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4960581 - 4960541
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagc 41  Q
    |||||||||||||||||||| ||| ||||||||||||||||    
T  4960581 taaacgacccctaattgcaatgatgaaatacatatttaagc 4960541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19018016 - 19018060
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||||  ||||||||||||| ||||||||||||||||||||    
T  19018016 taaacgacctgtaattgcaaggataaaatacatatttaagcctaa 19018060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 37471025 - 37471093
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa 173  Q
    ||||||||  ||||||||| ||||||||| |||||| |||||||||||| ||||  || ||||||||||    
T  37471025 gactaaaagcaccattaaatttttatagggactaaacttgaaaactcttgatttggtagggactaaaaa 37471093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 51015674 - 51015630
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||||    
T  51015674 taaacgacccctatttgcagggatcaattacatatttaagcctaa 51015630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 78 - 188
Target Start/End: Original strand, 33753026 - 33753136
Alignment:
Q  78 attcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-ata 176  Q
    ||||||| ||||| ||||| |||| | | ||||||| ||||||||||||||||| | |||||| || ||||||  | ||||| | ||||||||||| |||    
T  33753026 attcttacaaactacaatattatggagggctaaaatcaccattaaaattttatacggactaaactttaaaacttgtgattttgt-aggactaaaaacata 33753124  T
Q  177 tttaacactaaa 188  Q
    |||||| |||||    
T  33753125 tttaaccctaaa 33753136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 36694635 - 36694678
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||| || ||||||||||||||| |||||||||||||||||||    
T  36694635 taaacaacacctaattgcaaggatgaaatacatatttaagccta 36694678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 36710736 - 36710779
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||| || ||||||||||||||| |||||||||||||||||||    
T  36710736 taaacaacacctaattgcaaggatgaaatacatatttaagccta 36710779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 42248514 - 42248475
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaag 40  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  42248514 taaacgaccactaattgcaaggatgaaatacatatttaag 42248475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7231636 - 7231678
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||    
T  7231636 taaacgactcctaattacaaggataaaatacatatttaagcct 7231678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 13392934 - 13392840
Alignment:
Q  56 aaaagtttgtaagataggaaatattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaact 150  Q
    |||||||| ||| ||||| | |||| ||| ||||| ||||| | || | ||||||||||| |||||||| |||||||| |||||| || ||||||    
T  13392934 aaaagtttttaaaatagggactatttttacaaactacaatattttggatgactaaaattaacattaaaactttatagggactaaactttaaaact 13392840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 40210411 - 40210373
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaa 39  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  40210411 taaacgaccactaattgcaaggatgaaatacatatttaa 40210373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 48779510 - 48779548
Alignment:
Q  5 cgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  48779510 cgactcctaattgcaaggatgaaatacatatttaagcct 48779548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 49723113 - 49723147
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatat 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  49723113 taaacgacccctaattgcaaggatgaaatacatat 49723147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 51019736 - 51019778
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||    
T  51019736 taaacgacccctatttgcagggatcaattacatatttaagcct 51019778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 181
Target Start/End: Complemental strand, 1445066 - 1444962
Alignment:
Q  77 tattcttataaacttcaataatatgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-at 175  Q
    |||||||| ||||| ||||| |||| | || |||||||||  | ||||||||||||  |||||| |||||||||| | |||||  |||||||||||| ||    
T  1445066 tattcttaaaaactacaatattatggaggattaaaattact-taaaaattttatagagactaaacttgaaaactcgtgatttttcaaggactaaaaacat 1444968  T
Q  176 atttaa 181  Q
    ||||||    
T  1444967 atttaa 1444962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 26234441 - 26234478
Alignment:
Q  5 cgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||||| ||||| ||||||||||||||||||||||    
T  26234441 cgacccctatttgcagggatcaaatacatatttaagcc 26234478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 29307675 - 29307744
Alignment:
Q  100 tgaaagactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggacta 169  Q
    |||| |||||||||||| |||||||| ||||||| |||||| || ||||||| | ||||| || ||||||    
T  29307675 tgaaggactaaaattacaattaaaatcttatagggactaaacttaaaaactcatgattttgtagggacta 29307744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 31197106 - 31197065
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||| |||||||||||||| |||| |||||||||||||||||    
T  31197106 taaatgacccctaattgcagggatgaaatacatatttaagcc 31197065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 32917647 - 32917688
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||||| |||||||||| || |||||||||||||||||    
T  32917647 taaacgacccttaattgcaagaatgaaatacatatttaagcc 32917688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 13300291 - 13300331
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagc 41  Q
    |||||||| ||||||||||| ||| ||||||||||||||||    
T  13300291 taaacgacgcctaattgcaatgatgaaatacatatttaagc 13300331  T

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Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 13914454 - 13914494
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagc 41  Q
    ||||| ||| |||||||||||||| ||||||||||||||||    
T  13914454 taaacaacctctaattgcaaggatgaaatacatatttaagc 13914494  T

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Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 14879012 - 14878980
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacat 33  Q
    |||||||||||||||||||||||| ||||||||    
T  14879012 taaacgacccctaattgcaaggataaaatacat 14878980  T

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Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 48692401 - 48692441
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagc 41  Q
    ||||||||| |||||| ||| ||||||||||||||||||||    
T  48692401 taaacgacctctaattacaatgatcaaatacatatttaagc 48692441  T

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Target: scaffold0707 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 6466 - 6508
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  6466 taaacgacccctaattgcaaggatgaaatacatatttaagcct 6508  T

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Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 253838 - 253895
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttata 162  Q
    |||||||||||| |||||||||||||| |||||||| || ||||||| ||||||||||    
T  253838 gactaaaattactattaaaattttatatgaactaaacttaaaaactcataattttata 253895  T

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Target: scaffold0005; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 37950 - 37992
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||||| ||||||||||||||| ||||||||||||||||||    
T  37950 taaacgactcctaattgcaaggatgaaatacatatttaagcct 37992  T

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Target: scaffold0005; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 140
Target Start/End: Original strand, 33559 - 33593
Alignment:
Q  106 actaaaattaccattaaaattttataggaactaaa 140  Q
    |||||||||| ||||||||||||||||||||||||    
T  33559 actaaaattatcattaaaattttataggaactaaa 33593  T

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Target: scaffold0075 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14777 - 14818
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  14777 taaacgacccctaattgcaaggatgaaattcatatttaagcc 14818  T

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Target: scaffold0075; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 14470 - 14426
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcctaa 45  Q
    |||||||| ||||||||||| ||| ||||||||||||||||||||    
T  14470 taaacgactcctaattgcaatgatgaaatacatatttaagcctaa 14426  T

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Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 69006 - 68965
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    |||| ||||||||||||||||||| |||||||||||||||||    
T  69006 taaatgacccctaattgcaaggatgaaatacatatttaagcc 68965  T

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Target: scaffold0031; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 69352 - 69393
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagcc 42  Q
    ||||||||  |||||||||||||| |||||||||||||||||    
T  69352 taaacgacatctaattgcaaggatgaaatacatatttaagcc 69393  T

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Target: scaffold0775 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5003 - 4960
Alignment:
Q  1 taaacgacccctaattgcaaggatcaaatacatatttaagccta 44  Q
    ||||||||||||||||| | |||| |||||||||||||||||||    
T  5003 taaacgacccctaattgtagggatgaaatacatatttaagccta 4960  T

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Target: scaffold0478 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0478
Description:

Target: scaffold0478; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 182
Target Start/End: Complemental strand, 3297 - 3219
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-atatttaac 182  Q
    ||||||||||||||||||||||| ||||| | |||  || ||||||| | ||||| || |||||||||| |||||||||    
T  3297 gactaaaattaccattaaaatttcatagggattaagcttaaaaactcatgattttgtagggactaaaaacatatttaac 3219  T

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Target: scaffold0478; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 182
Target Start/End: Complemental strand, 8675 - 8597
Alignment:
Q  105 gactaaaattaccattaaaattttataggaactaaagttgaaaactcttaattttataaggactaaaaa-atatttaac 182  Q
    ||||||||||||||||||||||| || || |||||  || ||||||| | ||||| || |||||||||| |||||||||    
T  8675 gactaaaattaccattaaaatttcattgggactaagcttaaaaactcatgattttttagggactaaaaacatatttaac 8597  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 140
Target Start/End: Original strand, 363166 - 363200
Alignment:
Q  106 actaaaattaccattaaaattttataggaactaaa 140  Q
    |||||||||| ||||||||||||||||||||||||    
T  363166 actaaaattatcattaaaattttataggaactaaa 363200  T

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Target: scaffold0295 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 2517 - 2558
Alignment:
Q  2 aaacgacccctaattgcaaggatcaaatacatatttaagcct 43  Q
    |||||| ||||||||||||| || ||||||||||||||||||    
T  2517 aaacgatccctaattgcaagaatgaaatacatatttaagcct 2558  T

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