View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13253_high_37 (Length: 257)
Name: NF13253_high_37
Description: NF13253
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13253_high_37 |
 | |
|
| [»] scaffold0440 (2 HSPs) |
| | |
|
| [»] scaffold0044 (2 HSPs) |
| | |
|
| [»] scaffold0006 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 121; Significance: 4e-62; HSPs: 21)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 32486011 - 32486143
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
32486011 |
taacaaactctagatcttatttgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaaatgtgattaatcattgattgtgattatca |
32486110 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
32486111 |
ctaaaactaaacttgaattaaaacaaactaaca |
32486143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 19502440 - 19502306
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtg-gttaatcactgattgtgattatc |
116 |
Q |
| |
|
|||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
19502440 |
taacaaactctatatcttattttctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaaatgtgatttaatcactgattgtgattatc |
19502341 |
T |
|
| Q |
117 |
actaaaactaaacttgaattaaaacaaactaacag |
151 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |
|
|
| T |
19502340 |
actaaaactaaacttaaattaaaacaaactaacag |
19502306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 30695424 - 30695293
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
30695424 |
taacaaactctagatcttatatactaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaaatgtgattaaccactgattgtgattatca |
30695325 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| |
|
|
| T |
30695324 |
ct-aaactaaacttgaattaaaacaaactaaca |
30695293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 26336831 - 26336964
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaa-caaaatgtggttaatcactgattgtgattatc |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||| ||||||||| |||||||| ||||||||||||| |
|
|
| T |
26336831 |
taacaaactctagatcttatttgctaacctctaacaaacatgtaacaaacatcataacaaactaaaaacaaaatgtgattaatcaccgattgtgattatc |
26336930 |
T |
|
| Q |
117 |
actaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| |
|
|
| T |
26336931 |
actaaaattaaacttgaattaaaacaaactaaca |
26336964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 33 - 150
Target Start/End: Complemental strand, 12018849 - 12018731
Alignment:
| Q |
33 |
cttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaat-gtggttaatcactgattgtgattatcactaaaactaaactt |
131 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
12018849 |
cttatttgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaacttgtgattaaccactgattgtgattatcactaaaactaaactt |
12018750 |
T |
|
| Q |
132 |
gaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
12018749 |
gaattaaaacaaactaaca |
12018731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 33 - 150
Target Start/End: Complemental strand, 12023407 - 12023289
Alignment:
| Q |
33 |
cttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaat-gtggttaatcactgattgtgattatcactaaaactaaactt |
131 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
12023407 |
cttatttgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaacttgtgattaaccactgattgtgattatcactaaaactaaactt |
12023308 |
T |
|
| Q |
132 |
gaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
12023307 |
gaattaaaacaaactaaca |
12023289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 40371765 - 40371892
Alignment:
| Q |
22 |
aaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatcactaa |
121 |
Q |
| |
|
|||||||||||||||| | ||| |||||||||||||||| |||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||| | |
|
|
| T |
40371765 |
aaactctagatcttatctactagcctctaacaaacttgtaacaatcttcataacaaactaaaacaaaatgtgattaatctctgattgtgattatcact-a |
40371863 |
T |
|
| Q |
122 |
aactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
40371864 |
aactaaacttgaattaaaacaaactaaca |
40371892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 33 - 150
Target Start/End: Original strand, 7099413 - 7099531
Alignment:
| Q |
33 |
cttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaa-atgtggttaatcactgattgtgattatcactaaaactaaactt |
131 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
7099413 |
cttatttgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaacttgtgattaaccactgattgtgattatcactgaaactaaactt |
7099512 |
T |
|
| Q |
132 |
gaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
7099513 |
gaattaaaacaaactaaca |
7099531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 33 - 150
Target Start/End: Original strand, 7103982 - 7104100
Alignment:
| Q |
33 |
cttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaa-atgtggttaatcactgattgtgattatcactaaaactaaactt |
131 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
7103982 |
cttatttgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaacttgtgattaaccactgattgtgattatcactgaaactaaactt |
7104081 |
T |
|
| Q |
132 |
gaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
7104082 |
gaattaaaacaaactaaca |
7104100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 16794226 - 16794105
Alignment:
| Q |
33 |
cttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaa-atgtggttaatcactgattgtgattatcactaaaactaaactt |
131 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||| |||| ||||||||||||||| ||||||||||| |
|
|
| T |
16794226 |
cttatttgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaacttgtgattaaccacttattgtgattatcactgaaactaaactt |
16794127 |
T |
|
| Q |
132 |
gaattaaaacaaactaacagaa |
153 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
16794126 |
gaattaaaacaaactaacagaa |
16794105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 33 - 150
Target Start/End: Complemental strand, 16798787 - 16798669
Alignment:
| Q |
33 |
cttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaa-atgtggttaatcactgattgtgattatcactaaaactaaactt |
131 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||| |||| ||||||||||||||| ||||||||||| |
|
|
| T |
16798787 |
cttatttgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaacttgtgattaaccacttattgtgattatcactgaaactaaactt |
16798688 |
T |
|
| Q |
132 |
gaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
16798687 |
gaattaaaacaaactaaca |
16798669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 43385083 - 43384943
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
|||||||| |||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||| |||| |||| ||| ||||||||| |
|
|
| T |
43385083 |
taacaaaccctagattttatttgctaacttctaacaaacttgtaacaaacttcataacaaactaaaagcaaatgtgattaaccactaattatgattatca |
43384984 |
T |
|
| Q |
118 |
cta----aaactaaacttgaatt--aaaacaaactaacaga |
152 |
Q |
| |
|
||| |||||||||||||||| |||||||||||||||| |
|
|
| T |
43384983 |
ctaaactaaactaaacttgaattaaaaaacaaactaacaga |
43384943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 36632433 - 36632314
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||| ||||||||||||||||||| |
|
|
| T |
36632433 |
taacaaactctagatcttatttgctaacctctaacaaacttgt------------aacaaactaaaacaaagtgtgattattcactgattgtgattatca |
36632346 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| |
|
|
| T |
36632345 |
ct-aaactaaacttgaattaaaacaaactaaca |
36632314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 37682125 - 37682036
Alignment:
| Q |
62 |
acaaacttcataacaaactaaaacaaaat-gtggttaatcactgattgtgattatcactaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||||||||||| | ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37682125 |
acaaacttcataacaaactaaaacaaacttgtgattaaccactgattgtgattatcactaaaactaaacttgaattaaaacaaactaaca |
37682036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 40367638 - 40367757
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
|||||||||||||||||||| | ||| |||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
40367638 |
taacaaactctagatcttatctactagcctctaacaaacttgt------------aacaaactaaaacaaaatgtgattaatctctgattgtgattatca |
40367725 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| |
|
|
| T |
40367726 |
ct-aaactaaacttgaattaaaacaaactaaca |
40367757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 10277313 - 10277204
Alignment:
| Q |
40 |
gctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatcactaaaactaaacttgaattaaa |
139 |
Q |
| |
|
||||| ||||||| ||||||| ||||| ||||||||||||| || | ||||||| |||| |||| ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
10277313 |
gctaatctctaactaacttgtaacaaaattcataacaaactgaatctaaatgtgattaaccactaattgtgattatcact-aaactaaacttgaattaaa |
10277215 |
T |
|
| Q |
140 |
acaaactaaca |
150 |
Q |
| |
|
||||||||||| |
|
|
| T |
10277214 |
acaaactaaca |
10277204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 10274655 - 10274546
Alignment:
| Q |
40 |
gctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatcactaaaactaaacttgaattaaa |
139 |
Q |
| |
|
||||| ||||||| ||||||| ||||| ||||||||||||| || | ||||||| |||| || | ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
10274655 |
gctaatctctaactaacttgtaacaaaattcataacaaactgaatctaaatgtgattaaccattaattgtgattatcact-aaactaaacttgaattaaa |
10274557 |
T |
|
| Q |
140 |
acaaactaaca |
150 |
Q |
| |
|
||||||||||| |
|
|
| T |
10274556 |
acaaactaaca |
10274546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 62 - 151
Target Start/End: Complemental strand, 37658821 - 37658731
Alignment:
| Q |
62 |
acaaacttcataacaaactaaaacaaaat-gtggttaatcactgattgtgattatcactaaaactaaacttgaattaaaacaaactaacag |
151 |
Q |
| |
|
|||||||||||||||| |||||||||| | ||| |||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
37658821 |
acaaacttcataacaagctaaaacaaacttgtgattaaccactgattatgattatgactaaaactaaacttgaattaaaacaaactaacag |
37658731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 20830354 - 20830434
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaa |
98 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||| ||||||| |||| |
|
|
| T |
20830354 |
taacaaacacttgatcttatttgctaatctctaacaaacttgtaacaaacttcataacaaactgaaactaaatgtgattaa |
20830434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 20808675 - 20808746
Alignment:
| Q |
27 |
ctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaa |
98 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| || |||||||||||||||| |||| ||||||| |||| |
|
|
| T |
20808675 |
ctagatcttatttgttaacctctaacaaacttgtaactaacttcataacaaactgaaactaaatgtgattaa |
20808746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 165 - 242
Target Start/End: Original strand, 41483609 - 41483685
Alignment:
| Q |
165 |
acattccatcactcactctcattttgtttacccccaatttagatggaatgagatagaatctttcaataagttagtttt |
242 |
Q |
| |
|
||||||| ||||| |||| ||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||| |||| |
|
|
| T |
41483609 |
acattccttcacttactcccattttgcttacccccaatttggatggaatgagatggaatc-ttcaataagttaatttt |
41483685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 114; Significance: 7e-58; HSPs: 12)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 17895749 - 17895882
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
17895749 |
taacaaattctagatcttatttgctaacctctaacaaacttgtaacaaacttcagaacaaactaaaataaaatgtgattaatcactgattgtgattatca |
17895848 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaacag |
151 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
17895849 |
ctaaaactaaacttgaattaaaacaaactaacag |
17895882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 14531813 - 14531945
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||| ||||||| ||||||||||||| | |
|
|
| T |
14531813 |
taacaaactctagatcttatttgctaacctctaacaaacctgtaacaaacttcataacgaactaaaacaaaatgtgattaatcattgattgtgattataa |
14531912 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
14531913 |
ctaaaactaaacttgaattaaaacaaactaaca |
14531945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 17096300 - 17096431
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
17096300 |
taacaaactatagatcttatctgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaaatgtgattaatcactgattgtgattatca |
17096399 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| |
|
|
| T |
17096400 |
ct-aaactaaacttgaattaaaacaaactaaca |
17096431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 17886874 - 17887000
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
17886874 |
taacaaactctagatcttatttgctaacctctaacaaacttt------actttataacaaactaaaacaaaatgtgattaatcactgattgtgattatca |
17886967 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
17886968 |
ctaaaactaaacttgaattaaaacaaactaaca |
17887000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 8320068 - 8320199
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||| | |||| |||| |||||||||||||||||| |
|
|
| T |
8320068 |
taacaaactctagatcttatctactaacctctaacaaacttgtaacaaacttcataacaaactaaaacatattgtgattaaccactgattgtgattatca |
8320167 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| |
|
|
| T |
8320168 |
ct-aaactaaacttgaattaaaacaaactaaca |
8320199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 27552136 - 27552267
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
|||||||||||||||||||| ||||||| | |||||||| ||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
27552136 |
taacaaactctagatcttatctgctaacgtttaacaaacctgtaacaaacttcataacaaactaaaacaaaatgtgattaaccactgattgtgattatca |
27552235 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| |
|
|
| T |
27552236 |
ct-aaactaaacttgaattaaaacaaactaaca |
27552267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 8315529 - 8315661
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaa-atgtggttaatcactgattgtgattatc |
116 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||| ||||||||||||||||| |
|
|
| T |
8315529 |
taacaaactctagatcttatctactaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaacttgtgattaaccactgattgtgattatc |
8315628 |
T |
|
| Q |
117 |
actaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
||| |||||||||||||||||||||||||||||| |
|
|
| T |
8315629 |
act-aaactaaacttgaattaaaacaaactaaca |
8315661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 17780046 - 17779914
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
|||||||||||| ||||||| | ||| |||||||||||||| | |||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
17780046 |
taacaaactctaaatcttatctactagcctctaacaaacttttaacaaacttcataacaaactaaaacaaaatgtgattaatctctgattgtgattatca |
17779947 |
T |
|
| Q |
118 |
ctaaaactaaacttgaatt-aaaacaaactaaca |
150 |
Q |
| |
|
|| |||||||||||||||| |||||||||||||| |
|
|
| T |
17779946 |
ct-aaactaaacttgaattcaaaacaaactaaca |
17779914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 27574797 - 27574884
Alignment:
| Q |
62 |
acaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatcactaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
27574797 |
acaaacttcataacaaactaaaacaaaatgtgattaaccactgattgtgattatcact-aaactaaacttgaattaaaacaaactaaca |
27574884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 6440908 - 6440979
Alignment:
| Q |
40 |
gctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtga |
111 |
Q |
| |
|
||||| ||||||| ||||||| ||||| ||||||||||||| || | ||||||| |||| |||| ||||||| |
|
|
| T |
6440908 |
gctaatctctaactaacttgtaacaaaattcataacaaactgaatctaaatgtgattaaccactaattgtga |
6440979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 17163730 - 17163684
Alignment:
| Q |
47 |
tctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtg |
93 |
Q |
| |
|
|||||| ||||||| |||||||||| |||||||||||||||| |||| |
|
|
| T |
17163730 |
tctaaccaacttgtaacaaacttcaaaacaaactaaaacaaagtgtg |
17163684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 7888212 - 7888268
Alignment:
| Q |
46 |
ctctaacaaacttgtgacaaacttcataacaaactaaaa-caaaatgtggttaatca |
101 |
Q |
| |
|
|||||||||| |||| |||||||||| |||||||||||| |||| |||| ||||||| |
|
|
| T |
7888212 |
ctctaacaaagttgtaacaaacttcaaaacaaactaaaatcaaagtgtgattaatca |
7888268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 113; Significance: 3e-57; HSPs: 15)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 42234720 - 42234851
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
42234720 |
taacaaactctagatcttatttgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaagtgtgattaatcactgattgtgattatca |
42234819 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| |
|
|
| T |
42234820 |
ct-aaactaaacttgaattaaaacaaactaaca |
42234851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 28644693 - 28644562
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
28644693 |
taacaaactctagatcttatctgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaaatgtgattaaccactgattgtgattatca |
28644594 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| |
|
|
| T |
28644593 |
ct-aaactaaacttgaattaaaacaaactaaca |
28644562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 33072049 - 33071917
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||| |
|
|
| T |
33072049 |
taacaaactctagatcttatttgctaacctccaacaaacttgtaacaaacttcataacaaactaaaagaaagtgtgattaatcactgattgtgattatca |
33071950 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaacag |
151 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| |
|
|
| T |
33071949 |
ct-aaactaaacttgaattaaaacaaactaacag |
33071917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 33 - 150
Target Start/End: Original strand, 197723 - 197841
Alignment:
| Q |
33 |
cttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaat-gtggttaatcactgattgtgattatcactaaaactaaactt |
131 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
197723 |
cttatttgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaacttgtgattaaccactgattgtgattatcactaaaactaaactt |
197822 |
T |
|
| Q |
132 |
gaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
197823 |
gaattaaaacaaactaaca |
197841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 33 - 150
Target Start/End: Original strand, 202241 - 202359
Alignment:
| Q |
33 |
cttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaat-gtggttaatcactgattgtgattatcactaaaactaaactt |
131 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
202241 |
cttatttgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaacttgtgattaaccactgattgtgattatcactaaaactaaactt |
202340 |
T |
|
| Q |
132 |
gaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
202341 |
gaattaaaacaaactaaca |
202359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 33 - 150
Target Start/End: Original strand, 312560 - 312678
Alignment:
| Q |
33 |
cttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaat-gtggttaatcactgattgtgattatcactaaaactaaactt |
131 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
312560 |
cttatttgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaacttgtgattaaccactgattgtgattatcactaaaactaaactt |
312659 |
T |
|
| Q |
132 |
gaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
312660 |
gaattaaaacaaactaaca |
312678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 33 - 150
Target Start/End: Original strand, 317078 - 317196
Alignment:
| Q |
33 |
cttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaat-gtggttaatcactgattgtgattatcactaaaactaaactt |
131 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
317078 |
cttatttgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaacttgtgattaaccactgattgtgattatcactaaaactaaactt |
317177 |
T |
|
| Q |
132 |
gaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
317178 |
gaattaaaacaaactaaca |
317196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 30410355 - 30410486
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
||||||| |||||||||||| | |||||||||||||||||||| ||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| |
|
|
| T |
30410355 |
taacaaaatctagatcttatctactaacctctaacaaacttgtaacaaacttcataacaaattaaaacagaatgtgattaaccactgattgtgattatca |
30410454 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| |
|
|
| T |
30410455 |
ct-aaactaaacttgaattaaaacaaactaaca |
30410486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 33 - 150
Target Start/End: Original strand, 43807524 - 43807640
Alignment:
| Q |
33 |
cttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatcactaaaactaaacttg |
132 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
43807524 |
cttatttgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacagaatgtgattaaccactgattgtgattatcact-aaactaaacttg |
43807622 |
T |
|
| Q |
133 |
aattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||| |||||| |
|
|
| T |
43807623 |
aattaaaacaagctaaca |
43807640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 33 - 150
Target Start/End: Original strand, 43812083 - 43812199
Alignment:
| Q |
33 |
cttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatcactaaaactaaacttg |
132 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
43812083 |
cttatttgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacagaatgtgattaaccactgattgtgattatcact-aaactaaacttg |
43812181 |
T |
|
| Q |
133 |
aattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||| |||||| |
|
|
| T |
43812182 |
aattaaaacaagctaaca |
43812199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 38757122 - 38757003
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||||||| |||||||||||||| |||||| |||| |||||||||||||||||| |
|
|
| T |
38757122 |
taacaaactctagatcttatctactaacctctaacaaacttgt------------aacaaactaaaacagaatgtgattaaccactgattgtgattatca |
38757035 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| |
|
|
| T |
38757034 |
ct-aaactaaacttgaattaaaacaaactaaca |
38757003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 49 - 150
Target Start/End: Complemental strand, 41949902 - 41949802
Alignment:
| Q |
49 |
taacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatcactaaaactaaacttgaattaaaacaaactaa |
148 |
Q |
| |
|
|||| ||||||| |||||||||| |||||||||||||| | |||| ||||||||||||||||||||||||| ||||||| |||||||||||| ||||||| |
|
|
| T |
41949902 |
taaccaacttgtaacaaacttcaaaacaaactaaaacagagtgtgattaatcactgattgtgattatcact-aaactaagcttgaattaaaagaaactaa |
41949804 |
T |
|
| Q |
149 |
ca |
150 |
Q |
| |
|
|| |
|
|
| T |
41949803 |
ca |
41949802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 72 - 150
Target Start/End: Complemental strand, 41945416 - 41945339
Alignment:
| Q |
72 |
taacaaactaaaacaaaatgtggttaatcactgattgtgattatcactaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||| |||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
41945416 |
taacaaactaaaacaaagtgtgattaatcattgattgtgattatcact-aaactaaacttgaattaaaacaaactaaca |
41945339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 30405846 - 30405921
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtg |
93 |
Q |
| |
|
||||||| |||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
30405846 |
taacaaattctagatcttatctactaacctctaacaaacttgtaacaaacttcataacaaactaaaacagaatgtg |
30405921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 150
Target Start/End: Original strand, 30405918 - 30405960
Alignment:
| Q |
107 |
tgtgattatcactaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
30405918 |
tgtgattatcactaaa-ctaaacttgaattaaaacaaactaaca |
30405960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 113; Significance: 3e-57; HSPs: 18)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 8892646 - 8892778
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
|||||||||||| |||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
8892646 |
taacaaactctatatcttatttgctaatctctaacaaatttgtaacaaacttcataacaaactaaaacaaaatgtgattaatcactgattgtgattatca |
8892745 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
8892746 |
ctaaaactaaacttgaattaaaacaaactaaca |
8892778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 31670222 - 31670090
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||| |||||||||||||||||| |
|
|
| T |
31670222 |
taacaaactctagatcttatctgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaactgtgattaaccactgattgtgattatca |
31670123 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
31670122 |
ctaaaactaaacttgaattaaaacaaactaaca |
31670090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 10317089 - 10317220
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| ||||||||||||||||||||| | |
|
|
| T |
10317089 |
taacaaactctagatcttatttgctaacctctaacaaacttgtaacaaacttcataacaaactacaacaaagtgtgattaatcactgattgtgattataa |
10317188 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| |
|
|
| T |
10317189 |
ct-aaactaaacttgaattaaaacaaactaaca |
10317220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 53722138 - 53722007
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
53722138 |
taacaaactctagatcttatctgctagcctctaacaaacttgtaacaaacttcataacaaactaaaacaaaatgtgattaaccactgattgtgattatca |
53722039 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| |
|
|
| T |
53722038 |
ct-aaactaaacttgaattaaaacaaactaaca |
53722007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 27186275 - 27186142
Alignment:
| Q |
20 |
acaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaa-ctaaaa--caaaatgtggttaatcactgattgtgattatc |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| ||||||||| |||||||||||| |
|
|
| T |
27186275 |
acaaactctagatcttatttgctaacctctaacaaacttgtaacaaacttcataacaaaactaaaaaacaaaatgtgattaatcactaattgtgattatc |
27186176 |
T |
|
| Q |
117 |
actaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
27186175 |
actaaaactaaacttgaattaaaacaaactaaca |
27186142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 33 - 152
Target Start/End: Complemental strand, 3770960 - 3770840
Alignment:
| Q |
33 |
cttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaat-gtggttaatcactgattgtgattatcactaaaactaaactt |
131 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
3770960 |
cttatttgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaacttgtgattaaccactgattgtgattatcactaaaactaaactt |
3770861 |
T |
|
| Q |
132 |
gaattaaaacaaactaacaga |
152 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
3770860 |
gaattaaaacaaactaacaga |
3770840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 33 - 154
Target Start/End: Complemental strand, 44147141 - 44147019
Alignment:
| Q |
33 |
cttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaat-gtggttaatcactgattgtgattatcactaaaactaaactt |
131 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||| |||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
44147141 |
cttatttgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaacttgtgattaaccactgattgtgattatcactgaaactaaactt |
44147042 |
T |
|
| Q |
132 |
gaattaaaacaaactaacagaat |
154 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
44147041 |
gaattaaaacaaactaacagaat |
44147019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 33 - 150
Target Start/End: Complemental strand, 44151676 - 44151558
Alignment:
| Q |
33 |
cttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaa-atgtggttaatcactgattgtgattatcactaaaactaaactt |
131 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
44151676 |
cttatttgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaacttgtgattaaccactgattgtgattatcactgaaactaaactt |
44151577 |
T |
|
| Q |
132 |
gaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
44151576 |
gaattaaaacaaactaaca |
44151558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 43683700 - 43683813
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
43683700 |
taacaaactctatatcttatttgctaacctctaacaa-----------acttcataacaaactaaaacaaagtgtgattaatcactgattgtgattatca |
43683788 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaa |
143 |
Q |
| |
|
|||||| ||||||||||||||||||| |
|
|
| T |
43683789 |
ctaaaa-taaacttgaattaaaacaa |
43683813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 50627968 - 50628087
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||| |||||||||||||||||||| || |
|
|
| T |
50627968 |
taacaaactctagatcttatttgctaacctctaacaaacttgt------------aacaaactaaaaaaaaaagtgattaatcactgattgtgatta-ca |
50628054 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |
|
|
| T |
50628055 |
ctaaaactaatcttgaattaaaacaaactaaca |
50628087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 41885054 - 41884925
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
|||||||| ||| ||||||| ||||| ||||||| ||||||| ||||| ||||||||||||| || | ||||||| |||| |||| ||||||||||||| |
|
|
| T |
41885054 |
taacaaacccta-atcttatgagctaatctctaactaacttgtaacaaa-ttcataacaaactgaatctaaatgtgattaaccactaattgtgattatca |
41884957 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
|| ||||||||||||||||||||||||| |||| |
|
|
| T |
41884956 |
ct-aaactaaacttgaattaaaacaaaccaaca |
41884925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 31359260 - 31359151
Alignment:
| Q |
40 |
gctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatcactaaaactaaacttgaattaaa |
139 |
Q |
| |
|
||||| ||||||| ||||||| ||||| |||||| |||||| || | ||||||| |||| |||| ||||||||||||| | ||||||||||||||||||| |
|
|
| T |
31359260 |
gctaatctctaactaacttgtaacaaaattcatagcaaactgaatctaaatgtgattaaccactaattgtgattatca-ttaaactaaacttgaattaaa |
31359162 |
T |
|
| Q |
140 |
acaaactaaca |
150 |
Q |
| |
|
||||||||||| |
|
|
| T |
31359161 |
acaaactaaca |
31359151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 49274560 - 49274668
Alignment:
| Q |
40 |
gctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatcactaaaactaaacttgaattaaa |
139 |
Q |
| |
|
||||| ||||||| ||||||| ||||| ||||||||||||| || | ||||||| |||| |||| ||| |||| ||||||||| |||||||||||||||| |
|
|
| T |
49274560 |
gctaatctctaactaacttgtaacaaa-ttcataacaaactgaatctaaatgtgattaaccactaattatgatcatcactaaa-ctaaacttgaattaaa |
49274657 |
T |
|
| Q |
140 |
acaaactaaca |
150 |
Q |
| |
|
||||||||||| |
|
|
| T |
49274658 |
acaaactaaca |
49274668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 31354772 - 31354678
Alignment:
| Q |
54 |
aacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatcactaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||| ||||| |||||||||| || || | ||||||| |||| |||| ||||| |||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
31354772 |
aacttgtaacaaaattcataacaa-ctgaatctaaatgtgattaaccactaattgtaattatcactaaa-ctaaacttaaattaaaacaaactaaca |
31354678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 35842847 - 35842797
Alignment:
| Q |
72 |
taacaaactaaaacaaaatgtggttaatcactgattgtgattatcactaaa |
122 |
Q |
| |
|
||||| ||||||||||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
35842847 |
taacatactaaaacaaagtgtgattaatcactgattgtgattatcactaaa |
35842797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 242
Target Start/End: Complemental strand, 4699741 - 4699683
Alignment:
| Q |
183 |
tcattttgtttacccccaatttagatggaatgagatagaatctttcaataagttagtttt |
242 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| |||| |||||||| |||||||| |
|
|
| T |
4699741 |
tcattttgtttacccccaatttggatggaatgagatgaaatc-ttcaataaattagtttt |
4699683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 35842878 - 35842843
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaaca |
53 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
35842878 |
taacaaactctagatcttatttgctaacctctaaca |
35842843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 45976222 - 45976277
Alignment:
| Q |
46 |
ctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatca |
101 |
Q |
| |
|
|||||| |||||||| |||||||||| ||||||||||||||| ||||| ||||||| |
|
|
| T |
45976222 |
ctctaaaaaacttgtaacaaacttcaaaacaaactaaaacaagatgtgattaatca |
45976277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 112; Significance: 1e-56; HSPs: 13)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 9697717 - 9697586
Alignment:
| Q |
20 |
acaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaa-caaaatgtggttaatcactgattgtgattatcac |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||| |
|
|
| T |
9697717 |
acaaactctagatcttatttgctaacctctaacaaacttgtaacaaacttcataacaaactaaaaacaaaatgtgattaatcactaattgtgattatcac |
9697618 |
T |
|
| Q |
119 |
taaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
9697617 |
taaaactaaacttgaattaaaacaaactaaca |
9697586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 21847242 - 21847109
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||| |||||||||||||||||| |
|
|
| T |
21847242 |
taacaaactctagatcttatctgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaactgtgattaaccactgattgtgattatca |
21847143 |
T |
|
| Q |
118 |
ctaaaactaaacttgaatt-aaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| |
|
|
| T |
21847142 |
ctaaaactaaacttgaattaaaaacaaactaaca |
21847109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 21850332 - 21850199
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||| |||||||||||||||||| |
|
|
| T |
21850332 |
taacaaactctagatcttatctgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaactgtgattaaccactgattgtgattatca |
21850233 |
T |
|
| Q |
118 |
ctaaaactaaacttgaatt-aaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| |
|
|
| T |
21850232 |
ctaaaactaaacttgaattaaaaacaaactaaca |
21850199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 43547856 - 43547723
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaact-aaaacaaaatgtggttaatcactgattgtgattatc |
116 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |
|
|
| T |
43547856 |
taacaaactctagatcttatttgttaacctctaacaaacttgtaacaaacttcataacaaactaaaaacaaaatgtaattaatcactgattgtgattatc |
43547757 |
T |
|
| Q |
117 |
actaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| |
|
|
| T |
43547756 |
actaaaactaaacttgaattaaaacaagctaaca |
43547723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 11004429 - 11004560
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
11004429 |
taacaaactctagatcttatttgctaacctctaacaaacttgtaacaatcttcataacaagctaaaacaaaatgtgattattcactgattgtgattatca |
11004528 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| |
|
|
| T |
11004529 |
ct-aaactaaacttgaattaaaacaaactaaca |
11004560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 9105406 - 9105275
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||| ||||||||| ||||||| ||||||||||||||| |
|
|
| T |
9105406 |
taacaaactctagatcttatttgttaacctctaacaaacttgtaacatacttcataacaaactaaagcaaaatgtgattaatcattgattgtgattatca |
9105307 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| |
|
|
| T |
9105306 |
ct-aaactaaacttgaattaaaacaaactaaca |
9105275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 33 - 150
Target Start/End: Original strand, 54171963 - 54172081
Alignment:
| Q |
33 |
cttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaa-atgtggttaatcactgattgtgattatcactaaaactaaactt |
131 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
54171963 |
cttatttgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaacttgtgattaaccactgattgtgattatcactgaaactaaactt |
54172062 |
T |
|
| Q |
132 |
gaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
54172063 |
gaattaaaacaaactaaca |
54172081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 33 - 150
Target Start/End: Original strand, 54167383 - 54167501
Alignment:
| Q |
33 |
cttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaat-gtggttaatcactgattgtgattatcactaaaactaaactt |
131 |
Q |
| |
|
|||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| | ||| |||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
54167383 |
cttatttggtaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaacttgtgattaaccactgattgtgattatcactgaaactaaactt |
54167482 |
T |
|
| Q |
132 |
gaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
54167483 |
gaattaaaacaaactaaca |
54167501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 39399170 - 39399280
Alignment:
| Q |
40 |
gctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatcactaaaactaaacttgaattaaa |
139 |
Q |
| |
|
||||| ||||||| ||||||| ||||| ||||||||||||| || | ||||||| |||| |||| ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
39399170 |
gctaatctctaactaacttgtaacaaaattcataacaaactgaatctaaatgtgattaaccactaattgtgattatcact-aaactaaacttgaattaaa |
39399268 |
T |
|
| Q |
140 |
acaaactaacag |
151 |
Q |
| |
|
|||||||||||| |
|
|
| T |
39399269 |
acaaactaacag |
39399280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 72 - 150
Target Start/End: Complemental strand, 43554371 - 43554292
Alignment:
| Q |
72 |
taacaaactaaaa-caaaatgtggttaatcactgattgtgattatcactaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43554371 |
taacaaactaaaaacaaaatgtgactaatcactgattgtgattatcactaaaactaaacttgaattaaaacaaactaaca |
43554292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 43554696 - 43554645
Alignment:
| Q |
22 |
aaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcata |
73 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
43554696 |
aaactctagatcttatttgttaacctctaacaaacttgtaacaaacttcata |
43554645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 755933 - 755891
Alignment:
| Q |
46 |
ctctaacaaacttgtgacaaacttcataacaaactaaaacaaa |
88 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
755933 |
ctctaacaaacttgtaacaaacttcaaaacaaactaaaacaaa |
755891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 38175812 - 38175896
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcact |
103 |
Q |
| |
|
|||||||| ||| ||||||| ||||| ||||||| ||||||| ||||| ||||||||||||| |||| ||||||| |||| |||| |
|
|
| T |
38175812 |
taacaaacccta-atcttatgagctaatctctaactaacttgtaacaaaattcataacaaactgaaactaaatgtgattaaccact |
38175896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 109; Significance: 6e-55; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 12999490 - 12999622
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||| ||||||| |
|
|
| T |
12999490 |
taacaaactctagatcttatctgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaaatgtgattaaccactgattgttattatca |
12999589 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |
|
|
| T |
12999590 |
ctaaaactaaacttaaattaaaacaaactaaca |
12999622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 8050970 - 8050838
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||| | |||||| |||| |||||||||||||||||| |
|
|
| T |
8050970 |
taacaaactctagatcttatctactaacctctaacaaacttgtaacaaacttcataacaaactaaaatagaatgtgattaaccactgattgtgattatca |
8050871 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaacag |
151 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| |
|
|
| T |
8050870 |
ct-aaactaaacttgaattaaaacaaactaacag |
8050838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 8055523 - 8055392
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
|||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||| | |||||| |||| |||||||||||||||||| |
|
|
| T |
8055523 |
taacaaactctagatcttatctactaacctctaacaaacttgcaacaaacttcataacaaactaaaatagaatgtgattaaccactgattgtgattatca |
8055424 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| |
|
|
| T |
8055423 |
ct-aaactaaacttgaattaaaacaaactaaca |
8055392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 33 - 150
Target Start/End: Complemental strand, 36670621 - 36670503
Alignment:
| Q |
33 |
cttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaa-atgtggttaatcactgattgtgattatcactaaaactaaactt |
131 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
36670621 |
cttatttgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaacttgtgattaaccactgattgtgattatcactgaaactaaactt |
36670522 |
T |
|
| Q |
132 |
gaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
36670521 |
gaattaaaacaaactaaca |
36670503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 33 - 150
Target Start/End: Complemental strand, 36675169 - 36675051
Alignment:
| Q |
33 |
cttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaa-atgtggttaatcactgattgtgattatcactaaaactaaactt |
131 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
36675169 |
cttatttgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaacttgtgattaaccactgattgtgattatcactgaaactaaactt |
36675070 |
T |
|
| Q |
132 |
gaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
36675069 |
gaattaaaacaaactaaca |
36675051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 13271011 - 13271131
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
||||||||| |||||||||||| |||||||||||||||||| |||||||||||||| ||| ||| ||||||||||||||||||||||| |
|
|
| T |
13271011 |
taacaaactttagatcttatttactaacctctaacaaactt------------ataacaaactaaaataaagtgtaattaatcactgattgtgattatca |
13271098 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
13271099 |
ctaaaactaaacttgaattaaaacaaactaaca |
13271131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 6463464 - 6463583
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
6463464 |
taacaaactctagatcttatctactaacctctaacaaacttgt------------aacaaactaaaacaaaatgtgattaaccactgattgtgattatca |
6463551 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
|| |||||||||||||||||| ||||||||||| |
|
|
| T |
6463552 |
ct-aaactaaacttgaattaagacaaactaaca |
6463583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 35950486 - 35950595
Alignment:
| Q |
40 |
gctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatcactaaaactaaacttgaattaaa |
139 |
Q |
| |
|
||||| ||||||| ||||||| ||||| ||||||||||||| || | ||||||| |||| |||| ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
35950486 |
gctaatctctaactaacttgtaacaaaattcataacaaactgaacctaaatgtgattaaccactaattgtgattatcact-aaactaaacttgaattaaa |
35950584 |
T |
|
| Q |
140 |
acaaactaaca |
150 |
Q |
| |
|
||||||||||| |
|
|
| T |
35950585 |
acaaactaaca |
35950595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 41093933 - 41093824
Alignment:
| Q |
40 |
gctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatcactaaaactaaacttgaattaaa |
139 |
Q |
| |
|
||||| ||||||| || |||| ||||| ||||||||||||| || | |||| || ||||||||| ||||||||||||||| |||||||| |||||||||| |
|
|
| T |
41093933 |
gctaatctctaactaatttgtaacaaaattcataacaaactgaatctaaatatgattaatcactaattgtgattatcact-aaactaaatttgaattaaa |
41093835 |
T |
|
| Q |
140 |
acaaactaaca |
150 |
Q |
| |
|
|||||| |||| |
|
|
| T |
41093834 |
acaaaccaaca |
41093824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 34590324 - 34590280
Alignment:
| Q |
39 |
tgctaacctctaacaaacttgtgacaaacttcataacaaactaaaa |
84 |
Q |
| |
|
|||||| ||||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
34590324 |
tgctaatctctaacaaacttgtaacaaa-ttcataacaaactaaaa |
34590280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 214
Target Start/End: Original strand, 13016238 - 13016286
Alignment:
| Q |
167 |
attccatcactcactctcattttgtttaccc-ccaatttagatggaatg |
214 |
Q |
| |
|
||||||||||| |||||||||||| |||||| ||||||| ||||||||| |
|
|
| T |
13016238 |
attccatcacttactctcattttgcttaccctccaatttggatggaatg |
13016286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0440 (Bit Score: 106; Significance: 4e-53; HSPs: 2)
Name: scaffold0440
Description:
Target: scaffold0440; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 33 - 150
Target Start/End: Complemental strand, 7623 - 7506
Alignment:
| Q |
33 |
cttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatcactaaaactaaacttg |
132 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7623 |
cttatttgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaattgtgattaatcactgattgtgattatcactaaaactaaacttg |
7524 |
T |
|
| Q |
133 |
aattaaaacaaactaaca |
150 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
7523 |
aattaaaacaaactaaca |
7506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0440; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 33 - 150
Target Start/End: Complemental strand, 3098 - 2980
Alignment:
| Q |
33 |
cttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaat-gtggttaatcactgattgtgattatcactaaaactaaactt |
131 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
3098 |
cttatttgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaacttgtgattaaccactgattgtgattatcactaaaactaaactt |
2999 |
T |
|
| Q |
132 |
gaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
2998 |
gaattaaaacaaactaaca |
2980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 106; Significance: 4e-53; HSPs: 11)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 35705766 - 35705634
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcat-aacaaactaaaacaaaatgtggttaatcactgattgtgattatc |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
35705766 |
taacaaactctagatcttatttgctaacctctaacaaacttgtaacaaactccataaacaaactaaaacaaaatgtgattaatcactgattgtgattatc |
35705667 |
T |
|
| Q |
117 |
actaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
||| |||||||||||||||||||||||||||||| |
|
|
| T |
35705666 |
act-aaactaaacttgaattaaaacaaactaaca |
35705634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 22901287 - 22901154
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaa-atgtggttaatcactgattgtgattatc |
116 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||| ||||||||||||||||| |
|
|
| T |
22901287 |
taacaaactctagatcttatctgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaacttgtgattaaccactgattgtgattatc |
22901188 |
T |
|
| Q |
117 |
actaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |
|
|
| T |
22901187 |
actaaaactaaactttaattaaaacaaactaaca |
22901154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 27761528 - 27761397
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
|||||||||||||||||||| | | |||||||||||||||||| ||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| |
|
|
| T |
27761528 |
taacaaactctagatcttatctacaaacctctaacaaacttgtaacaaacttcataacaaactaaaacagaatgtgattaaccactgattgtgattatca |
27761429 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| |
|
|
| T |
27761428 |
ct-aaactaaacttgaattaaaacaaactaaca |
27761397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 27756977 - 27756844
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
|||||||||||||||||||| | | |||||||||||||||||| ||||||||||||||||||||||||| |||| | |||| |||||||||||||||||| |
|
|
| T |
27756977 |
taacaaactctagatcttatctacaaacctctaacaaacttgtaacaaacttcataacaaactaaaacagaatgcgattaaccactgattgtgattatca |
27756878 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaacaga |
152 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||| |
|
|
| T |
27756877 |
ct-aaactaaacttgaattaaaacaaactaacaga |
27756844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 18 - 144
Target Start/End: Original strand, 47419604 - 47419729
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
||||||||||||||| |||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
47419604 |
taacaaactctagatattatctgctaacctctaagaaacttgtaacaaacttcataacaaactaaaacaaaatgtgattaaccactgattgtgattatca |
47419703 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaa |
144 |
Q |
| |
|
|| |||||||||||||||||||||||| |
|
|
| T |
47419704 |
ct-aaactaaacttgaattaaaacaaa |
47419729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 7944675 - 7944794
Alignment:
| Q |
33 |
cttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaa-atgtggttaatcactgattgtgattatcactaaaactaaactt |
131 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
7944675 |
cttatttgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaacttgtgattaaccactgattgtgattatcactgaaactaaactt |
7944774 |
T |
|
| Q |
132 |
gaattaaaacaaactaacag |
151 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
7944775 |
gaattaaaacaaactaacag |
7944794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 33 - 150
Target Start/End: Original strand, 7940122 - 7940240
Alignment:
| Q |
33 |
cttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaa-atgtggttaatcactgattgtgattatcactaaaactaaactt |
131 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
7940122 |
cttatttgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaacttgtgattaaccactgattgtgattatcactgaaactaaactt |
7940221 |
T |
|
| Q |
132 |
gaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
7940222 |
gaattaaaacaaactaaca |
7940240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 7466549 - 7466669
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
7466549 |
taacaaactctagatcttatttgctaacctctaacaaacttgt------------aacaaactaaaacaaaatgtgattaatcattgattgtgattatca |
7466636 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
7466637 |
ctaaaactaaacttgaattaaaacaaactaaca |
7466669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 733692 - 733756
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaa |
82 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||| |
|
|
| T |
733692 |
taacaaactctagatcttatttgctaacctctaacaaaattgtaacaaatttcataacaaactaa |
733756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 37355670 - 37355589
Alignment:
| Q |
40 |
gctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaa-aatgtggttaatcactgattgtgattatcacta |
120 |
Q |
| |
|
||||| |||||| |||||||| |||| |||||||||||||||| ||| ||| || |||| |||| | |||||||||||||| |
|
|
| T |
37355670 |
gctaatctctaagaaacttgtaacaactttcataacaaactaaagcaataatatgattaaccactaagtgtgattatcacta |
37355589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 13828156 - 13828208
Alignment:
| Q |
46 |
ctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaa |
98 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||| ||| |||||||| |||| |
|
|
| T |
13828156 |
ctctaacaaacttgtaacaaacttcagaacaaacaaaatgaaaatgtgattaa |
13828208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 101; Significance: 4e-50; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 16588504 - 16588635
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||| ||||||||||||| |
|
|
| T |
16588504 |
taacaaactctagatcttatatgataacctctaacaaacttgtaacaaacttcataacaaactaaaacaaaatgtgattaaccacttattgtgattatca |
16588603 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| |
|
|
| T |
16588604 |
ct-aaactaaacttgaattaaaacaaactaaca |
16588635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 39793962 - 39793829
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||| |||| | |||| |||||||||||||||||| |
|
|
| T |
39793962 |
taacaaactctagatcttatctactaacctctaacaaacttgtaacaaacttcataacaaactaaaacagaatgagattaaccactgattgtgattatca |
39793863 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaacaga |
152 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||| |
|
|
| T |
39793862 |
ct-aaactaaacttgaattaaaacaaactaacaga |
39793829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 43591847 - 43591978
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||| ||| || | ||||||||||||||||||||||| |
|
|
| T |
43591847 |
taacaaactctagattttatttgctaacctctaacaatattgtaacaaacttcataacaaactaaaataaagtgcgattaatcactgattgtgattatca |
43591946 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| |
|
|
| T |
43591947 |
ct-aaactaaacttgaattaaaacaaactaaca |
43591978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 10504545 - 10504436
Alignment:
| Q |
40 |
gctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatcactaaaactaaacttgaattaaa |
139 |
Q |
| |
|
||||| ||||||| ||||||| ||||| ||||||||||||| || | ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
10504545 |
gctaatctctaactaacttgtaacaaaattcataacaaactgaatctaaatgtgattaatcactaattgtgattatcact-aaactaaacttgaattaaa |
10504447 |
T |
|
| Q |
140 |
acaaactaaca |
150 |
Q |
| |
|
||||||||||| |
|
|
| T |
10504446 |
acaaactaaca |
10504436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 26311641 - 26311521
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||||||| |||||||||||||| |||||| |||| |||||||||||||||||| |
|
|
| T |
26311641 |
taacaaactctagatcttatctactaacctctaacaaacttgt------------aacaaactaaaacagaatgtgattaaccactgattgtgattatca |
26311554 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaacag |
151 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| |
|
|
| T |
26311553 |
ct-aaactaaacttgaattaaaacaaactaacag |
26311521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 26316132 - 26316013
Alignment:
| Q |
18 |
taacaaactctagatcttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaatgtggttaatcactgattgtgattatca |
117 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||||||| |||||||||||||| |||||| |||| |||||||||||||||||| |
|
|
| T |
26316132 |
taacaaactctagatcttatctactaacctctaacaaacttgt------------aacaaactaaaacagaatgtgattaaccactgattgtgattatca |
26316045 |
T |
|
| Q |
118 |
ctaaaactaaacttgaattaaaacaaactaaca |
150 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| |
|
|
| T |
26316044 |
ct-aaactaaacttgaattaaaacaaactaaca |
26316013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0044 (Bit Score: 96; Significance: 4e-47; HSPs: 2)
Name: scaffold0044
Description:
Target: scaffold0044; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 49484 - 49603
Alignment:
| Q |
33 |
cttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaat-gtggttaatcactgattgtgattatcactaaaactaaactt |
131 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
49484 |
cttatttgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaacttgtgattaaccactgattgtgattatcactaaaactaaactt |
49583 |
T |
|
| Q |
132 |
gaattaaaacaaactaacag |
151 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
49584 |
gaattaaaacaaactaacag |
49603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0044; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 33 - 150
Target Start/End: Original strand, 44904 - 45022
Alignment:
| Q |
33 |
cttatttgctaacctctaacaaacttgtgacaaacttcataacaaactaaaacaaaat-gtggttaatcactgattgtgattatcactaaaactaaactt |
131 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
44904 |
cttatttgctaacctctaacaaacttgtaacaaacttcataacaaactaaaacaaacttgtgattaaccactgattgtgattatcactaaaactaaactt |
45003 |
T |
|
| Q |
132 |
gaattaaaacaaactaaca |
150 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
45004 |
gaattaaaacaaactaaca |
45022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 60201 - 60302
Alignment:
| Q |
47 |
tctaacaaacttgtgacaaacttcataacaaact-aaaacaaaatgtggttaatcactgattgtgattatcactaaaactaaacttgaattaaaacaaac |
145 |
Q |
| |
|
||||||||||| || ||||| || |||||||||| |||| ||||||| ||||||||| ||||||||||| | ||| | ||||||||||||||||||| |
|
|
| T |
60201 |
tctaacaaactggtaacaaaatttataacaaactaaaaattaaatgtgattaatcactaattgtgattatatcacaaagt-aacttgaattaaaacaaac |
60299 |
T |
|
| Q |
146 |
taa |
148 |
Q |
| |
|
||| |
|
|
| T |
60300 |
taa |
60302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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