View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13253_high_48 (Length: 222)
Name: NF13253_high_48
Description: NF13253
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13253_high_48 |
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Alignment Details
Target: chr5 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 15 - 207
Target Start/End: Complemental strand, 1079162 - 1078970
Alignment:
| Q |
15 |
caaagggtacttgcccaaatttgtggtgttgggacttcaatcactatgttcattgctttaacctaaagaagttacttccagctttgtgaagttgctcaat |
114 |
Q |
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| T |
1079162 |
caaagggtacttgcccaaatttgtggtgttgggacttcaatcactatgttcattgctttaacctaaagaagttacttccagctttgtgaagttgctcaat |
1079063 |
T |
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| Q |
115 |
gaatttagcgtgcatttaattataccgcggcgaaaattgattttggttgaaaatgagtaatttacattttgatacatttacaaaagtggtttt |
207 |
Q |
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| T |
1079062 |
gaatttagcgtgtatttaattataccgcggcgaaaattgattttggttgaaaatgagtaatttacattttgatacatttacaaaagtggtttt |
1078970 |
T |
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