View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13253_low_34 (Length: 279)
Name: NF13253_low_34
Description: NF13253
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13253_low_34 |
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Alignment Details
Target: chr2 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 45346434 - 45346172
Alignment:
| Q |
1 |
ttgattaaatttattgcgaattaatgttgagtttgatgcgtataagtggtgggaacaagtcatttagccattgaatccttaaaaatgtcaaataacagcc |
100 |
Q |
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| T |
45346434 |
ttgattaaatttattgcgaattaatgttgagtttgatgcgtataagtggtgggaacaagtcatttagccattgaatccttaaaaatgtcaaataacagcc |
45346335 |
T |
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| Q |
101 |
gttaggccatttctcaactttctgcacaaacgttctttacaattctaattcttttgcattcttaaaagatttttagtgtattgaaatgacttggaacttc |
200 |
Q |
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| T |
45346334 |
gttaggccatttctcaactttctgcacaaacgttctttacaattctaattcttttgcattctt-aaagatttttagtgtattgaaatgacttggaacttc |
45346236 |
T |
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| Q |
201 |
ttagatgagaatacgaatcctatttgaatgtatgatgtgatggattccctattgtgtggattgt |
264 |
Q |
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| T |
45346235 |
ttagatgagaatacgaatcctatttgaatgtatgatgtgatggattccctattgtgtggattgt |
45346172 |
T |
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