View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13254_low_20 (Length: 528)
Name: NF13254_low_20
Description: NF13254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13254_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 427; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 427; E-Value: 0
Query Start/End: Original strand, 82 - 512
Target Start/End: Complemental strand, 284077 - 283647
Alignment:
| Q |
82 |
ctaataatatcttgatttgcatatctcttttgcaggttttgagacagtcacctacatgctagaggtatgtatctatgtatattgaccatctttgtaccac |
181 |
Q |
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| T |
284077 |
ctaataatatcttgatttgcatatctcttttgcaggttttgagacagtcacctacatgctagaggtatgtatctatgtatattgaccatctttgtaccac |
283978 |
T |
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| Q |
182 |
acttccgtgtttccaatgttcaacatgataccgacacatttaattatatgtagttaatttattttctttaaattattacgaaaatctatatgtactttgt |
281 |
Q |
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| T |
283977 |
acttccgtgtttccgatgttcaacatgataccgacacatttaattatatgtagttaatttattttctttaaattattacgaaaatctatatgtactttgt |
283878 |
T |
|
| Q |
282 |
gtctgatgtcggtgtctgtgtcagcactttaatgatgtctaagttttattttactttcaacattggtttattattgtcattttatttgcctaaaaagttt |
381 |
Q |
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| T |
283877 |
gtctgatgtcggtgtctgtgtcagcactttaatgatgtctaagttttattttactttcaacattggtttattattgtcattttatttgcctaaaaagttt |
283778 |
T |
|
| Q |
382 |
gacattgcttgaattcagggaggtataactcatcaagattttgctggccacaagggtacaataagaactggtgatgttcaggtaggtagttaccaacaac |
481 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
283777 |
gacattgcttgaattcagggaggtataactcatcaagattttgctggccacaagggtacaataagaactggtgatgttcaggtaggtagttaccaacaac |
283678 |
T |
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| Q |
482 |
actaattgatcataaagagttatacaaaaac |
512 |
Q |
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| T |
283677 |
actaattgatcataaagagttatacaaaaac |
283647 |
T |
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