View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13254_low_55 (Length: 388)

Name: NF13254_low_55
Description: NF13254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13254_low_55
NF13254_low_55
[»] chr1 (29 HSPs)
chr1 (129-369)||(50749942-50750186)
chr1 (36-115)||(50749617-50749696)
chr1 (163-235)||(32574991-32575063)
chr1 (23-75)||(12635151-12635203)
chr1 (25-67)||(35584647-35584689)
chr1 (21-71)||(39927579-39927629)
chr1 (336-369)||(19411830-19411863)
chr1 (21-66)||(31692523-31692568)
chr1 (33-69)||(16161821-16161857)
chr1 (33-69)||(34413163-34413199)
chr1 (11-67)||(34519142-34519198)
chr1 (33-69)||(49626901-49626937)
chr1 (32-71)||(39987395-39987434)
chr1 (33-67)||(5701269-5701303)
chr1 (33-67)||(7997799-7997833)
chr1 (33-67)||(28035149-28035183)
chr1 (33-67)||(40881049-40881083)
chr1 (33-67)||(45426103-45426137)
chr1 (25-67)||(51868674-51868716)
chr1 (20-69)||(5855910-5855959)
chr1 (21-74)||(47132885-47132938)
chr1 (11-67)||(7342732-7342788)
chr1 (33-69)||(19060897-19060933)
chr1 (27-67)||(19723343-19723383)
chr1 (27-67)||(33291449-33291489)
chr1 (25-65)||(33817209-33817249)
chr1 (25-65)||(33876679-33876719)
chr1 (23-71)||(48365792-48365840)
chr1 (33-69)||(48750168-48750204)
[»] chr5 (21 HSPs)
chr5 (13-69)||(1582140-1582196)
chr5 (13-69)||(1602619-1602675)
chr5 (21-69)||(10332605-10332653)
chr5 (21-69)||(38111005-38111053)
chr5 (11-71)||(42886482-42886542)
chr5 (11-74)||(19983370-19983433)
chr5 (33-69)||(8088280-8088316)
chr5 (33-69)||(14211206-14211242)
chr5 (33-69)||(19103540-19103576)
chr5 (33-69)||(28540979-28541015)
chr5 (32-67)||(28235593-28235628)
chr5 (32-67)||(36344527-36344562)
chr5 (21-71)||(7613083-7613133)
chr5 (33-67)||(10649652-10649686)
chr5 (25-67)||(30298216-30298258)
chr5 (33-67)||(34881726-34881760)
chr5 (33-67)||(41184477-41184511)
chr5 (33-69)||(19349680-19349716)
chr5 (21-69)||(26510700-26510748)
chr5 (25-69)||(28097159-28097203)
chr5 (33-69)||(39567281-39567317)
[»] chr4 (31 HSPs)
chr4 (11-71)||(18138928-18138988)
chr4 (11-71)||(49126141-49126201)
chr4 (25-71)||(35261205-35261251)
chr4 (27-71)||(9645580-9645624)
chr4 (21-69)||(18048887-18048935)
chr4 (21-71)||(2624510-2624560)
chr4 (25-67)||(10389783-10389825)
chr4 (21-75)||(52944309-52944363)
chr4 (24-69)||(21405530-21405575)
chr4 (26-67)||(43444411-43444452)
chr4 (33-69)||(22300853-22300889)
chr4 (33-69)||(36194709-36194745)
chr4 (33-69)||(47320460-47320496)
chr4 (20-75)||(33332627-33332682)
chr4 (33-67)||(868180-868214)
chr4 (33-67)||(4643876-4643910)
chr4 (33-67)||(8009398-8009432)
chr4 (33-67)||(9283929-9283963)
chr4 (33-67)||(9528914-9528948)
chr4 (33-67)||(25273901-25273935)
chr4 (33-67)||(29965653-29965687)
chr4 (25-67)||(31381701-31381743)
chr4 (33-71)||(46991167-46991205)
chr4 (33-67)||(47417680-47417714)
chr4 (33-67)||(53616687-53616721)
chr4 (34-75)||(28857400-28857441)
chr4 (33-65)||(9048672-9048704)
chr4 (33-69)||(9145955-9145991)
chr4 (21-69)||(9643392-9643440)
chr4 (33-69)||(27651944-27651980)
chr4 (11-71)||(35964990-35965050)
[»] chr2 (27 HSPs)
chr2 (21-69)||(12647978-12648026)
chr2 (25-69)||(10548232-10548276)
chr2 (25-88)||(27477137-27477200)
chr2 (25-67)||(4228143-4228185)
chr2 (25-67)||(7015740-7015782)
chr2 (25-67)||(9986371-9986413)
chr2 (25-59)||(26025439-26025473)
chr2 (25-67)||(30420688-30420730)
chr2 (33-69)||(3308935-3308971)
chr2 (13-69)||(37416704-37416760)
chr2 (21-69)||(37614150-37614198)
chr2 (32-67)||(2808508-2808543)
chr2 (20-67)||(34128741-34128788)
chr2 (21-71)||(459299-459349)
chr2 (19-69)||(6358929-6358979)
chr2 (33-67)||(20047119-20047153)
chr2 (33-67)||(27249188-27249222)
chr2 (33-75)||(29574698-29574740)
chr2 (25-67)||(32913251-32913293)
chr2 (33-67)||(40659969-40660003)
chr2 (21-74)||(30923498-30923550)
chr2 (11-71)||(9374571-9374631)
chr2 (25-65)||(18113881-18113921)
chr2 (21-69)||(28227738-28227786)
chr2 (33-69)||(32448688-32448724)
chr2 (33-65)||(36234020-36234052)
chr2 (11-69)||(36323866-36323921)
[»] chr6 (22 HSPs)
chr6 (21-71)||(25337572-25337622)
chr6 (21-71)||(33543645-33543695)
chr6 (21-69)||(26588529-26588577)
chr6 (22-69)||(22571459-22571506)
chr6 (20-69)||(34185749-34185798)
chr6 (21-69)||(528407-528455)
chr6 (11-75)||(31296799-31296863)
chr6 (32-67)||(7881138-7881173)
chr6 (33-67)||(8028155-8028189)
chr6 (33-67)||(8196444-8196478)
chr6 (25-67)||(8496973-8497015)
chr6 (25-59)||(17334792-17334826)
chr6 (33-67)||(23947355-23947389)
chr6 (33-67)||(25064242-25064276)
chr6 (33-71)||(34489252-34489290)
chr6 (20-69)||(7976233-7976282)
chr6 (32-69)||(14801808-14801845)
chr6 (32-69)||(30776653-30776690)
chr6 (33-69)||(8102707-8102743)
chr6 (25-69)||(8266646-8266690)
chr6 (11-67)||(10228685-10228741)
chr6 (33-69)||(30493517-30493553)
[»] chr3 (23 HSPs)
chr3 (25-71)||(36734721-36734767)
chr3 (21-69)||(4396391-4396439)
chr3 (20-75)||(29239320-29239375)
chr3 (33-67)||(21488094-21488128)
chr3 (25-67)||(42719520-42719562)
chr3 (33-67)||(51202291-51202325)
chr3 (20-69)||(12947330-12947379)
chr3 (33-69)||(7546593-7546629)
chr3 (35-67)||(17237808-17237840)
chr3 (27-67)||(24396545-24396585)
chr3 (11-67)||(36906125-36906181)
chr3 (33-69)||(51487089-51487125)
chr3 (32-71)||(31794070-31794109)
chr3 (28-67)||(49552256-49552295)
chr3 (28-74)||(22803018-22803064)
chr3 (33-67)||(25162439-25162473)
chr3 (25-67)||(29503465-29503507)
chr3 (33-67)||(35499235-35499269)
chr3 (32-69)||(8914691-8914728)
chr3 (20-69)||(41818195-41818244)
chr3 (33-69)||(16235405-16235441)
chr3 (33-69)||(27706299-27706335)
chr3 (33-69)||(42460729-42460765)
[»] chr8 (27 HSPs)
chr8 (11-67)||(43192361-43192417)
chr8 (22-69)||(5333415-5333462)
chr8 (25-67)||(4808977-4809019)
chr8 (25-67)||(11196902-11196944)
chr8 (33-67)||(14906960-14906994)
chr8 (25-67)||(42448056-42448098)
chr8 (21-74)||(28239839-28239892)
chr8 (21-69)||(8443566-8443614)
chr8 (21-69)||(29617329-29617377)
chr8 (27-67)||(34611817-34611857)
chr8 (33-69)||(41896499-41896535)
chr8 (33-67)||(9619394-9619428)
chr8 (33-67)||(11464184-11464218)
chr8 (33-67)||(32724518-32724552)
chr8 (25-67)||(35580470-35580512)
chr8 (33-67)||(44099971-44100005)
chr8 (22-71)||(15597193-15597242)
chr8 (34-67)||(19876224-19876257)
chr8 (24-65)||(36033394-36033435)
chr8 (33-69)||(1236763-1236799)
chr8 (33-69)||(1239463-1239499)
chr8 (33-69)||(15344295-15344331)
chr8 (33-69)||(15433360-15433396)
chr8 (33-69)||(15524664-15524700)
chr8 (33-69)||(18890770-18890806)
chr8 (33-69)||(36532908-36532944)
chr8 (33-65)||(39657440-39657472)
[»] chr7 (21 HSPs)
chr7 (11-70)||(32521942-32522001)
chr7 (28-74)||(6002020-6002066)
chr7 (25-67)||(46339060-46339102)
chr7 (25-74)||(969508-969557)
chr7 (11-71)||(17611127-17611187)
chr7 (33-69)||(22742926-22742962)
chr7 (33-69)||(24350910-24350946)
chr7 (33-69)||(28476209-28476245)
chr7 (25-67)||(1448859-1448901)
chr7 (25-67)||(14627908-14627950)
chr7 (25-67)||(23786581-23786623)
chr7 (25-75)||(29844846-29844896)
chr7 (28-74)||(31235824-31235870)
chr7 (33-67)||(32684674-32684708)
chr7 (25-67)||(35667261-35667303)
chr7 (25-67)||(42067090-42067132)
chr7 (25-67)||(42408368-42408410)
chr7 (25-74)||(42311279-42311328)
chr7 (33-69)||(1749220-1749256)
chr7 (33-69)||(35132929-35132965)
chr7 (33-69)||(48930755-48930791)
[»] scaffold0002 (1 HSPs)
scaffold0002 (21-71)||(453934-453984)
[»] scaffold0347 (1 HSPs)
scaffold0347 (33-69)||(6014-6050)
[»] scaffold0146 (1 HSPs)
scaffold0146 (35-67)||(16359-16391)
[»] scaffold0039 (1 HSPs)
scaffold0039 (35-69)||(93090-93124)
[»] scaffold0003 (1 HSPs)
scaffold0003 (33-67)||(361836-361870)
[»] scaffold0113 (1 HSPs)
scaffold0113 (20-69)||(36711-36760)
[»] scaffold0495 (1 HSPs)
scaffold0495 (11-67)||(5404-5460)


Alignment Details
Target: chr1 (Bit Score: 196; Significance: 1e-106; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 129 - 369
Target Start/End: Original strand, 50749942 - 50750186
Alignment:
Q  129 agtcatcgtggatgtggatgagaaacataagcatataatgttattgaacatataaccttaatgacaaagaaaacactgaaaacaacaatgttcttgcaag 228  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  50749942 agtcatcgtggatgtggatgagaaacataagcata--atgttattgaacatataaccttaatgacaaagaaaacactgaaaacaacaattttcttgcaag 50750039  T
Q  229 agttaccataaaaaactctacataattaaaaaa-gaaactcagatctagagcagatgttgtgtacactgc-----ttacatttttgtagttatagttaaa 322  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||     || ||||||||||||||||||||||    
T  50750040 agttaccataaaaaactctacataataaaaaaaagaaactcagatctagagcagatgttgtgtacactgcactgcttccatttttgtagttatagttaaa 50750139  T
Q  323 gccatgcactgagcatctcattccaaatatcaggcacaccagggagg 369  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  50750140 gccatgcactgagcatctcattccaaatatcaggcacaccagggagg 50750186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 36 - 115
Target Start/End: Original strand, 50749617 - 50749696
Alignment:
Q  36 tcaaacaacgccgcacaagacgacaaacaacacaccgccggatgacgaaatcatgagagaaaaattagatccatgtgaaa 115  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  50749617 tcaaacaacgccgcacaagacgacatacaacacaccgccggatgacgaaatcatgagagaaaaattatatccatgtgaaa 50749696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 32574991 - 32575063
Alignment:
Q  163 ataatgttattgaacatataaccttaatgacaaagaaaacactgaaaacaacaatgttcttgcaagagttacc 235  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  32574991 ataatgttattgaacatataaccttaatgacaaagaaaacactcaaaacaacaatgttcttgcaagagttacc 32575063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 12635203 - 12635151
Alignment:
Q  23 acaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacaccgccg 75  Q
    |||| ||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  12635203 acaaaacgtaaaatcaaacaacgccgcacaagacgacgaacaacacaacgccg 12635151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 35584647 - 35584689
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||| |||||||||||||||||||||||||||| |||||||    
T  35584647 aagacggaaaatcaaacaacgccgcacaagacgacgaacaaca 35584689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 39927579 - 39927629
Alignment:
Q  21 caacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacacc 71  Q
    ||||||||||  ||||||||||||||| ||||||||||| |||||||||||    
T  39927579 caacaagacgggaaatcaaacaacgccacacaagacgacgaacaacacacc 39927629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 336 - 369
Target Start/End: Original strand, 19411830 - 19411863
Alignment:
Q  336 catctcattccaaatatcaggcacaccagggagg 369  Q
    ||||||||||||||||||||||||||||||||||    
T  19411830 catctcattccaaatatcaggcacaccagggagg 19411863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 31692523 - 31692568
Alignment:
Q  21 caacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaac 66  Q
    |||||||| | ||||||||||||| |||||||||||||||||||||    
T  31692523 caacaagaagcaaaatcaaacaacaccgcacaagacgacaaacaac 31692568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 16161857 - 16161821
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||||||||||||||||||| |||||||||    
T  16161857 aaatcaaacaacgccgcacaagacgacgaacaacaca 16161821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 34413163 - 34413199
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||||||||||||||||||| |||||||||    
T  34413163 aaatcaaacaacgccgcacaagacgacgaacaacaca 34413199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 34519198 - 34519142
Alignment:
Q  11 atgaacaatacaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||||  |||| ||||||| ||||||||||||||||||||| ||||| |||||||    
T  34519198 atgaacaccacaagaagacgagaaatcaaacaacgccgcacaaaacgacgaacaaca 34519142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 49626937 - 49626901
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||||||||||||||||||| |||||||||    
T  49626937 aaatcaaacaacgccgcacaagacgacgaacaacaca 49626901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 39987434 - 39987395
Alignment:
Q  32 aaaatcaaacaacgccgcacaagacgacaaacaacacacc 71  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  39987434 aaaatcaaacaacgccgcacaagacgacgaacaatacacc 39987395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 5701303 - 5701269
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  5701303 aaatcaaacaacgccgcacaagacgacgaacaaca 5701269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 7997833 - 7997799
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  7997833 aaatcaaacaacgccgcacaagacgacgaacaaca 7997799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 28035183 - 28035149
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  28035183 aaatcaaacaacgccgcacaagacgacgaacaaca 28035149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 40881049 - 40881083
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  40881049 aaatcaaacaacgccgcacaagacgacgaacaaca 40881083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 45426103 - 45426137
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  45426103 aaatcaaacaacgccgcacaagacgacgaacaaca 45426137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 51868674 - 51868716
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||| ||| ||||||||||||||||||||||| |||||||    
T  51868674 aagacgagaaagcaaacaacgccgcacaagacgacgaacaaca 51868716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 5855959 - 5855910
Alignment:
Q  20 acaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||| |||||||||||| | ||||||||| ||||| |||||||    
T  5855959 acaacaagacgtaaaatcaaacaatgtcgcacaagatgacaagcaacaca 5855910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 47132938 - 47132885
Alignment:
Q  21 caacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacaccgcc 74  Q
    ||||||||||  |||| |||||||||||||||| ||||| ||||||||| ||||    
T  47132938 caacaagacgcgaaattaaacaacgccgcacaaaacgacgaacaacacaacgcc 47132885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 7342788 - 7342732
Alignment:
Q  11 atgaacaatacaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||  ||| ||||||  ||| ||||||||||||||||||||||| |||||||    
T  7342788 atgaacaacgcaagaagacgggaaaacaaacaacgccgcacaagacgacgaacaaca 7342732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 19060933 - 19060897
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  19060933 aaatcaaacaacgccacacaagacgacgaacaacaca 19060897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 19723383 - 19723343
Alignment:
Q  27 gacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||| ||||||||||||||||||| |||||||| |||||||    
T  19723383 gacggaaaatcaaacaacgccgcagaagacgacgaacaaca 19723343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 33291449 - 33291489
Alignment:
Q  27 gacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||| ||||||||||||| |||||||||||||| |||||||    
T  33291449 gacggaaaatcaaacaacaccgcacaagacgacgaacaaca 33291489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 33817209 - 33817249
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaa 65  Q
    ||||||| |||||||||||||| ||| ||||||||||||||    
T  33817209 aagacgagaaatcaaacaacgcagcataagacgacaaacaa 33817249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 33876679 - 33876719
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaa 65  Q
    ||||||| |||||||||||||| ||| ||||||||||||||    
T  33876679 aagacgagaaatcaaacaacgcagcataagacgacaaacaa 33876719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 48365792 - 48365840
Alignment:
Q  23 acaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacacc 71  Q
    ||||||| |||||||||||||||  |||||||| ||| |||||||||||    
T  48365792 acaagacaaaaaatcaaacaacgttgcacaagatgacgaacaacacacc 48365840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 48750204 - 48750168
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  48750204 aaatcaaacaacgtcgcacaagacgacgaacaacaca 48750168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 6e-19; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 1582140 - 1582196
Alignment:
Q  13 gaacaatacaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1582140 gaacattacaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacgacaca 1582196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 1602675 - 1602619
Alignment:
Q  13 gaacaatacaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1602675 gaacattacaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacgacaca 1602619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 10332605 - 10332653
Alignment:
Q  21 caacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  10332605 caacaagacgcgaaatcaaacaatgccgcacaagacgacaaacaacaca 10332653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 38111005 - 38111053
Alignment:
Q  21 caacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    |||||||||  ||||||||||||||||||||||||| ||||||||||||    
T  38111005 caacaagacacaaaatcaaacaacgccgcacaagacaacaaacaacaca 38111053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 42886542 - 42886482
Alignment:
Q  11 atgaacaatacaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacacc 71  Q
    ||||||| | ||||||| ||  ||||||||||||||||||||||||||| |||||||||||    
T  42886542 atgaacactgcaacaaggcgggaaatcaaacaacgccgcacaagacgacgaacaacacacc 42886482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 19983370 - 19983433
Alignment:
Q  11 atgaacaatacaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacaccgcc 74  Q
    |||||||  |||||||||||||||| | |||||||||||||||| |||| ||||||||| ||||    
T  19983370 atgaacaccacaacaagacgaaaaaactaacaacgccgcacaaggcgacgaacaacacagcgcc 19983433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 8088280 - 8088316
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    |||||||||||||||||||||||||| ||||||||||    
T  8088280 aaatcaaacaacgccgcacaagacgataaacaacaca 8088316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 14211242 - 14211206
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||||||||||||||||||| |||||||||    
T  14211242 aaatcaaacaacgccgcacaagacgacgaacaacaca 14211206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 19103540 - 19103576
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||||||||||||||||||| |||||||||    
T  19103540 aaatcaaacaacgccgcacaagacgactaacaacaca 19103576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 28540979 - 28541015
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||||||||||||||||||| |||||||||    
T  28540979 aaatcaaacaacgccgcacaagacgacgaacaacaca 28541015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 67
Target Start/End: Complemental strand, 28235628 - 28235593
Alignment:
Q  32 aaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||||| ||||||    
T  28235628 aaaatcaaacaacgccgcacaagacgacagacaaca 28235593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 36344527 - 36344562
Alignment:
Q  32 aaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||||||||||||||||||||||||| |||||||    
T  36344527 aaaatcaaacaacgccgcacaagacgacgaacaaca 36344562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 7613083 - 7613133
Alignment:
Q  21 caacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacacc 71  Q
    ||||||||||| ||||||||||||   |||||||||||| |||||||||||    
T  7613083 caacaagacgagaaatcaaacaacattgcacaagacgacgaacaacacacc 7613133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 10649686 - 10649652
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  10649686 aaatcaaacaacgccgcacaagacgacgaacaaca 10649652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 30298258 - 30298216
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||| ||||||||||| |||||||||||||||| |||||||    
T  30298258 aagacggaaaatcaaacagcgccgcacaagacgacgaacaaca 30298216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 34881760 - 34881726
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  34881760 aaatcaaacaacgccgcacaagacgacgaacaaca 34881726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 41184477 - 41184511
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  41184477 aaatcaaacaacgccgcacaagacgacgaacaaca 41184511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 19349716 - 19349680
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    |||||||| |||||||||||||||||| |||||||||    
T  19349716 aaatcaaataacgccgcacaagacgacgaacaacaca 19349680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 26510700 - 26510748
Alignment:
Q  21 caacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    |||||||||| |||||||||||||| ||||||||| ||| || ||||||    
T  26510700 caacaagacgcaaaatcaaacaacgacgcacaagatgacgaataacaca 26510748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 28097203 - 28097159
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||| |||||||||||| |||||||| ||||||| |||||||    
T  28097203 aagacgagaaatcaaacaacaccgcacaaaacgacaaccaacaca 28097159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 39567317 - 39567281
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    |||||||||||||||||||||||| || |||||||||    
T  39567317 aaatcaaacaacgccgcacaagacaacgaacaacaca 39567281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 18138928 - 18138988
Alignment:
Q  11 atgaacaatacaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacacc 71  Q
    ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||||||||    
T  18138928 atgaacactgcaacaagatggaaaatcaaacaacgccgcacaagacgacgaacaacacacc 18138988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 49126141 - 49126201
Alignment:
Q  11 atgaacaatacaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacacc 71  Q
    ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||||||||    
T  49126141 atgaacactgcaacaagatggaaaatcaaacaacgccgcacaagacgacgaacaacacacc 49126201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 35261251 - 35261205
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacacc 71  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||    
T  35261251 aagacggaaaatcaaacaacgccgcagaagacgacaaacaacacacc 35261205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 9645580 - 9645624
Alignment:
Q  27 gacgaaaaatcaaacaacgccgcacaagacgacaaacaacacacc 71  Q
    |||| |||||||||||||||||||||||||||| |||||||||||    
T  9645580 gacggaaaatcaaacaacgccgcacaagacgacgaacaacacacc 9645624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 18048935 - 18048887
Alignment:
Q  21 caacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||| || |||||||||||||||| |||||||||||||||||||||    
T  18048935 caacaaggcgcaaaatcaaacaacgccacacaagacgacaaacaacaca 18048887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 2624560 - 2624510
Alignment:
Q  21 caacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacacc 71  Q
    ||||||||||  ||||||||| ||||||||||||||||| |||||||||||    
T  2624560 caacaagacgggaaatcaaactacgccgcacaagacgacgaacaacacacc 2624510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 10389783 - 10389825
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||| |||||||||||||||||||||||||||| |||||||    
T  10389783 aagacggaaaatcaaacaacgccgcacaagacgacgaacaaca 10389825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 52944363 - 52944309
Alignment:
Q  21 caacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacaccgccg 75  Q
    |||||||||| ||||| |||||||||||||||| ||||| ||||||||| |||||    
T  52944363 caacaagacgcaaaattaaacaacgccgcacaaaacgacgaacaacacaacgccg 52944309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 21405575 - 21405530
Alignment:
Q  24 caagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    |||||||||||||||||||| | ||| |||||||||||||||||||    
T  21405575 caagacgaaaaatcaaacaatgtcgcccaagacgacaaacaacaca 21405530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 43444452 - 43444411
Alignment:
Q  26 agacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||| |||||||||||||||||||||||||||| |||||||    
T  43444452 agacggaaaatcaaacaacgccgcacaagacgacgaacaaca 43444411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 22300889 - 22300853
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||||||||||||||||||| |||||||||    
T  22300889 aaatcaaacaacgccgcacaagacgacgaacaacaca 22300853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 36194745 - 36194709
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||||||||||||||||||| |||||||||    
T  36194745 aaatcaaacaacgccgcacaagacgacgaacaacaca 36194709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 47320460 - 47320496
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||||||||||||||||||| |||||||||    
T  47320460 aaatcaaacaacgccgcacaagacgacgaacaacaca 47320496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 33332627 - 33332682
Alignment:
Q  20 acaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacaccgccg 75  Q
    ||||||||| |  ||||||||||||| |||||||| |||||||||||||| |||||    
T  33332627 acaacaagatgcgaaatcaaacaacgtcgcacaaggcgacaaacaacacaacgccg 33332682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 868214 - 868180
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  868214 aaatcaaacaacgccgcacaagacgacgaacaaca 868180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 4643910 - 4643876
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  4643910 aaatcaaacaacgccgcacaagacgacgaacaaca 4643876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 8009398 - 8009432
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  8009398 aaatcaaacaacgccgcacaagacgacgaacaaca 8009432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 9283963 - 9283929
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||| |||||||||||||||||||    
T  9283963 aaatcaaacaacgccacacaagacgacaaacaaca 9283929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 9528914 - 9528948
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  9528914 aaatcaaacaacgccgcacaagacgacgaacaaca 9528948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 25273935 - 25273901
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  25273935 aaatcaaacaacgccgcacaagacgacgaacaaca 25273901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 29965687 - 29965653
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  29965687 aaatcaaacaacgccgcacaagacgacgaacaaca 29965653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 31381701 - 31381743
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||| ||||||||||||||| |||||||||||| |||||||    
T  31381701 aagacggaaaatcaaacaacgctgcacaagacgacgaacaaca 31381743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 46991167 - 46991205
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacacacc 71  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  46991167 aaatcaaacaacgccacagaagacgacaaacaacacacc 46991205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 47417714 - 47417680
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  47417714 aaatcaaacaacgccgcacaagacgacgaacaaca 47417680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 53616687 - 53616721
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  53616687 aaatcaaacaacgccgcacaagacgacgaacaaca 53616721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 75
Target Start/End: Complemental strand, 28857441 - 28857400
Alignment:
Q  34 aatcaaacaacgccgcacaagacgacaaacaacacaccgccg 75  Q
    ||||||||||||||||||||||| || ||||||||| |||||    
T  28857441 aatcaaacaacgccgcacaagacaacgaacaacacaacgccg 28857400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 65
Target Start/End: Complemental strand, 9048704 - 9048672
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaa 65  Q
    |||||| ||||||||||||||||||||||||||    
T  9048704 aaatcagacaacgccgcacaagacgacaaacaa 9048672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 9145955 - 9145991
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  9145955 aaatcaaacaatgccgcacaagacgacgaacaacaca 9145991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 9643440 - 9643392
Alignment:
Q  21 caacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    |||||||| || ||||||||||||| ||| ||||||||| |||||||||    
T  9643440 caacaagatgagaaatcaaacaacgtcgctcaagacgacgaacaacaca 9643392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 27651980 - 27651944
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    |||||||||||| |||||||||||||| |||||||||    
T  27651980 aaatcaaacaacaccgcacaagacgacgaacaacaca 27651944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 35964990 - 35965050
Alignment:
Q  11 atgaacaatacaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacacc 71  Q
    |||||||  |||| ||||||  ||||||||||||||| |||| |||||| |||||||||||    
T  35964990 atgaacaccacaataagacgggaaatcaaacaacgccacacaggacgacgaacaacacacc 35965050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 12647978 - 12648026
Alignment:
Q  21 caacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  12647978 caacaagacgagaaatcaaacaacgccgcacaagacgacgaacaacaca 12648026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 10548276 - 10548232
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||    
T  10548276 aagacgaaaaatcaaacaacgtcgcacaagacgacaaataacaca 10548232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 27477200 - 27477137
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacaccgccggatgacgaaatca 88  Q
    |||||| ||||||||||| ||||||||||||| |||||||||| ||| || ||||| |||||||    
T  27477200 aagacggaaaatcaaacagcgccgcacaagactacaaacaacaaaccaccagatgatgaaatca 27477137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 4228185 - 4228143
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||| |||||||||||||||||||||||||||| |||||||    
T  4228185 aagacggaaaatcaaacaacgccgcacaagacgacgaacaaca 4228143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 7015740 - 7015782
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||| |||||||||||||||||||||||||||| |||||||    
T  7015740 aagacggaaaatcaaacaacgccgcacaagacgacgaacaaca 7015782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 9986371 - 9986413
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||| |||||||||||||||||||||||||||| |||||||    
T  9986371 aagacggaaaatcaaacaacgccgcacaagacgacgaacaaca 9986413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 26025439 - 26025473
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgac 59  Q
    |||||||||||||||||||||||||||||||||||    
T  26025439 aagacgaaaaatcaaacaacgccgcacaagacgac 26025473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 30420730 - 30420688
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||| |||||||||||||||||||||||||||| |||||||    
T  30420730 aagacggaaaatcaaacaacgccgcacaagacgacgaacaaca 30420688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 3308971 - 3308935
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    |||||||||||||||||||||||||||||| ||||||    
T  3308971 aaatcaaacaacgccgcacaagacgacaaataacaca 3308935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 37416760 - 37416704
Alignment:
Q  13 gaacaatacaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||| |||||||||| |  ||||||||||||| ||||||||||||| |||||||||    
T  37416760 gaacattacaacaagatgtgaaatcaaacaacgtcgcacaagacgacgaacaacaca 37416704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 37614150 - 37614198
Alignment:
Q  21 caacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    |||||||||| |||||||||||||| ||||||||||||  |||||||||    
T  37614150 caacaagacggaaaatcaaacaacgacgcacaagacgaagaacaacaca 37614198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 2808508 - 2808543
Alignment:
Q  32 aaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||||||||||||||||||||||||| |||||||    
T  2808508 aaaatcaaacaacgccgcacaagacgacgaacaaca 2808543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 34128741 - 34128788
Alignment:
Q  20 acaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||| | |||||||||||| ||||||||||||| |||||||    
T  34128741 acaacaagacgcacaatcaaacaacgtcgcacaagacgacgaacaaca 34128788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 459299 - 459349
Alignment:
Q  21 caacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacacc 71  Q
    |||||||||| |||||||||||||| || |||||||||| |||| ||||||    
T  459299 caacaagacggaaaatcaaacaacgtcgtacaagacgacgaacagcacacc 459349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 6358929 - 6358979
Alignment:
Q  19 tacaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    |||||||||| |  |||||||||||||| |||||||||||| |||||||||    
T  6358929 tacaacaagatgcgaaatcaaacaacgctgcacaagacgacgaacaacaca 6358979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 20047119 - 20047153
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  20047119 aaatcaaacaacgccgcacaagacgacgaacaaca 20047153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 27249188 - 27249222
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  27249188 aaatcaaacaacgccgcacaagacgacgaacaaca 27249222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 29574698 - 29574740
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacacaccgccg 75  Q
    ||||||||||| ||||||||||||||| ||||||||| |||||    
T  29574698 aaatcaaacaatgccgcacaagacgacgaacaacacaacgccg 29574740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 32913293 - 32913251
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||| ||||||||||| |||||||||||||||| |||||||    
T  32913293 aagacggaaaatcaaacagcgccgcacaagacgacgaacaaca 32913251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 40659969 - 40660003
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  40659969 aaatcaaacaacgccgcacaagacgacgaacaaca 40660003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 30923498 - 30923550
Alignment:
Q  21 caacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacaccgcc 74  Q
    ||||||||| | |||||||| ||||||||||||||||||| |||||||| ||||    
T  30923498 caacaagacaagaaatcaaa-aacgccgcacaagacgacatacaacacagcgcc 30923550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 9374571 - 9374631
Alignment:
Q  11 atgaacaatacaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacacc 71  Q
    |||||||  ||||||||||| |||| ||||||| | ||||||||| ||| |||||||||||    
T  9374571 atgaacaccacaacaagacggaaaaacaaacaatgacgcacaagatgacgaacaacacacc 9374631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 18113921 - 18113881
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaa 65  Q
    |||||| ||||||||||||||||||||||||| | ||||||    
T  18113921 aagacggaaaatcaaacaacgccgcacaagaccataaacaa 18113881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 28227738 - 28227786
Alignment:
Q  21 caacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||| ||||| ||||||| ||||||||||||| |||| ||||    
T  28227738 caacaagacgagaaatctaacaacgtcgcacaagacgacgaacagcaca 28227786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 32448688 - 32448724
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  32448688 aaatcaaacaacggcgcacaagacgacgaacaacaca 32448724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 65
Target Start/End: Complemental strand, 36234052 - 36234020
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaa 65  Q
    ||||||||||||||||||||||||||| |||||    
T  36234052 aaatcaaacaacgccgcacaagacgacgaacaa 36234020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 36323921 - 36323866
Alignment:
Q  11 atgaacaatacaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||| | ||||||||||| |||||||||   |||||||||||| ||||||||||||    
T  36323921 atgaacatttcaacaagacgagaaatcaaac---gccgcacaagacaacaaacaacaca 36323866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 25337622 - 25337572
Alignment:
Q  21 caacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacacc 71  Q
    |||||||||||||||||||||||| |||| ||||||||| |||||||||||    
T  25337622 caacaagacgaaaaatcaaacaacaccgcgcaagacgacgaacaacacacc 25337572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 33543645 - 33543695
Alignment:
Q  21 caacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacacc 71  Q
    |||||||||  |||||||||||||||||||||||||||| |||||||||||    
T  33543645 caacaagacagaaaatcaaacaacgccgcacaagacgacgaacaacacacc 33543695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 26588529 - 26588577
Alignment:
Q  21 caacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||  ||||||||||||||||||||||||||||| |||||||    
T  26588529 caacaagacgggaaatcaaacaacgccgcacaagacgacaatcaacaca 26588577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 22571506 - 22571459
Alignment:
Q  22 aacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||||||    
T  22571506 aacaaaacgcaaaatcaaacaacgccgcacaagacgacgaacaacaca 22571459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 34185749 - 34185798
Alignment:
Q  20 acaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||| |||||||||||||| | |||||||||||||||| ||||    
T  34185749 acaacaagacgcaaaatcaaacaacgtcacacaagacgacaaacagcaca 34185798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 528407 - 528455
Alignment:
Q  21 caacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    |||||||||  |||||||||||||||||||||||| |||||| ||||||    
T  528407 caacaagacacaaaatcaaacaacgccgcacaagatgacaaataacaca 528455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 31296863 - 31296799
Alignment:
Q  11 atgaacaatacaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacaccgccg 75  Q
    ||||||| | |||||||| | |||||||||||||||||||||||| ||  ||||||||| |||||    
T  31296863 atgaacactgcaacaagatgcaaaatcaaacaacgccgcacaagatgatgaacaacacaacgccg 31296799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 7881138 - 7881173
Alignment:
Q  32 aaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||||||||||||||||||||||||| |||||||    
T  7881138 aaaatcaaacaacgccgcacaagacgacgaacaaca 7881173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 8028155 - 8028189
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  8028155 aaatcaaacaacgccgcacaagacgacgaacaaca 8028189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 8196444 - 8196478
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  8196444 aaatcaaacaacgccgcacaagacgacgaacaaca 8196478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 8497015 - 8496973
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||| ||||||||||||||||||||||| ||| |||||||    
T  8497015 aagacgagaaatcaaacaacgccgcacaagatgacgaacaaca 8496973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 59
Target Start/End: Complemental strand, 17334826 - 17334792
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgac 59  Q
    |||||| ||||||||||||||||||||||||||||    
T  17334826 aagacggaaaatcaaacaacgccgcacaagacgac 17334792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 23947355 - 23947389
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  23947355 aaatcaaacaacgccgcacaagacgacgaacaaca 23947389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 25064276 - 25064242
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  25064276 aaatcaaacaacgccgcacaagacgacgaacaaca 25064242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 34489290 - 34489252
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacacacc 71  Q
    ||||||||||||| ||||||||||||| |||||||||||    
T  34489290 aaatcaaacaacgtcgcacaagacgacgaacaacacacc 34489252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 7976233 - 7976282
Alignment:
Q  20 acaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||| | ||| ||| |||||||||||||||||| |||||||||    
T  7976233 acaacaagacgcataattaaaaaacgccgcacaagacgacgaacaacaca 7976282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 14801845 - 14801808
Alignment:
Q  32 aaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  14801845 aaaatcaaacagcgccgcacaagacgacgaacaacaca 14801808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 30776690 - 30776653
Alignment:
Q  32 aaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  30776690 aaaatcaaacaacgccgcacaagatgacgaacaacaca 30776653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 8102743 - 8102707
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||||||||||||||||||| || ||||||    
T  8102743 aaatcaaacaacgccgcacaagacgacgaaaaacaca 8102707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 8266690 - 8266646
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||| |||||||||||||||||||||||| || || ||||||    
T  8266690 aagacgacaaatcaaacaacgccgcacaagacaacgaataacaca 8266646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 10228741 - 10228685
Alignment:
Q  11 atgaacaatacaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||||  |||| ||||||  ||| ||||||||||||||||||||||| |||||||    
T  10228741 atgaacaccacaagaagacgggaaagcaaacaacgccgcacaagacgacgaacaaca 10228685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 30493553 - 30493517
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    |||||||||||||| |||||||||||| |||||||||    
T  30493553 aaatcaaacaacgctgcacaagacgacgaacaacaca 30493517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 36734721 - 36734767
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacacc 71  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||    
T  36734721 aagacggaaaatcaaacaacgccgcacaagacgacgaacaacacacc 36734767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 4396391 - 4396439
Alignment:
Q  21 caacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||| || |||||||||||||||| |||||||||||||||||||||    
T  4396391 caacaaggcgcaaaatcaaacaacgccacacaagacgacaaacaacaca 4396439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 29239375 - 29239320
Alignment:
Q  20 acaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacaccgccg 75  Q
    |||||||||||  |||||||||| |||||||||||||||| ||||||||| |||||    
T  29239375 acaacaagacgtgaaatcaaacagcgccgcacaagacgacgaacaacacaacgccg 29239320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 21488128 - 21488094
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||||||||||||||||||||||||||||||||    
T  21488128 aaatcaaacaacgccgcacaagacgacaaacaaca 21488094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 42719562 - 42719520
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||| |||||||||||||||||||||||||||| |||||||    
T  42719562 aagacggaaaatcaaacaacgccgcacaagacgacgaacaaca 42719520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 51202291 - 51202325
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||||||||||||||||||||||||||||||||    
T  51202291 aaatcaaacaacgccgcacaagacgacaaacaaca 51202325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 12947330 - 12947379
Alignment:
Q  20 acaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||| |  ||||||||||||||||||||||||||| |||||||||    
T  12947330 acaacaagatgcgaaatcaaacaacgccgcacaagacgacgaacaacaca 12947379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 7546629 - 7546593
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||||||||||||||||||| |||||||||    
T  7546629 aaatcaaacaacgccgcacaagacgacgaacaacaca 7546593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 67
Target Start/End: Complemental strand, 17237840 - 17237808
Alignment:
Q  35 atcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||||||||||||||||||||||||||||||    
T  17237840 atcaaacaacgccgcacaagacgacaaacaaca 17237808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 24396545 - 24396585
Alignment:
Q  27 gacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  24396545 gacggaaaatcaaacaacgtcgcacaagacgacaaacaaca 24396585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 36906181 - 36906125
Alignment:
Q  11 atgaacaatacaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||| ||||  ||||||  ||||||||||||||||||||||||||| |||||||    
T  36906181 atgaacactacacgaagacgggaaatcaaacaacgccgcacaagacgacgaacaaca 36906125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 51487125 - 51487089
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||||||||||||||||||| |||||||||    
T  51487125 aaatcaaacaacgccgcacaagacgacgaacaacaca 51487089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 31794109 - 31794070
Alignment:
Q  32 aaaatcaaacaacgccgcacaagacgacaaacaacacacc 71  Q
    |||||||||||||||||||||| ||||| |||||||||||    
T  31794109 aaaatcaaacaacgccgcacaaaacgacgaacaacacacc 31794070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 49552256 - 49552295
Alignment:
Q  28 acgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||| ||||||||||||||||||||||||||| |||||||    
T  49552256 acgagaaatcaaacaacgccgcacaagacgacgaacaaca 49552295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 22803064 - 22803018
Alignment:
Q  28 acgaaaaatcaaacaacgccgcacaagacgacaaacaacacaccgcc 74  Q
    |||| |||||||||||||||||| |||||||| ||||||| ||||||    
T  22803064 acgagaaatcaaacaacgccgcataagacgacgaacaacaaaccgcc 22803018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 25162473 - 25162439
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  25162473 aaatcaaacaacgccgcacaagacgacgaacaaca 25162439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 29503507 - 29503465
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||| ||||||||||| |||||||||||||||| |||||||    
T  29503507 aagacggaaaatcaaacagcgccgcacaagacgacgaacaaca 29503465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 35499235 - 35499269
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  35499235 aaatcaaacaacgccgcacaagacgacgaacaaca 35499269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 8914728 - 8914691
Alignment:
Q  32 aaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  8914728 aaaatcaaacagcgccgcacaagacgacgaacaacaca 8914691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 41818244 - 41818195
Alignment:
Q  20 acaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    |||||||||||  |||||||||||  |||||||||||||| |||||||||    
T  41818244 acaacaagacgcgaaatcaaacaataccgcacaagacgacgaacaacaca 41818195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 16235441 - 16235405
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||||||||||||||||| | |||||||||    
T  16235441 aaatcaaacaacgccgcacaagacggcgaacaacaca 16235405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 27706299 - 27706335
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    |||| |||||||||||||||||||||| |||||||||    
T  27706299 aaattaaacaacgccgcacaagacgacgaacaacaca 27706335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 42460765 - 42460729
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||||||||||||||||||  |||||||||    
T  42460765 aaatcaaacaacgccgcacaagacgatgaacaacaca 42460729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000009; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 43192361 - 43192417
Alignment:
Q  11 atgaacaatacaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||||  |||| |||||| |||||||||||||||||||||||||||| |||||||    
T  43192361 atgaacaccacaagaagacggaaaatcaaacaacgccgcacaagacgacgaacaaca 43192417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 5333462 - 5333415
Alignment:
Q  22 aacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||| ||||||||||||| |||||||||||||| |||||||||    
T  5333462 aacaagacgcaaaatcaaacaacaccgcacaagacgacgaacaacaca 5333415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 4809019 - 4808977
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||| |||||||||||||||||||||||||||| |||||||    
T  4809019 aagacggaaaatcaaacaacgccgcacaagacgacgaacaaca 4808977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 11196944 - 11196902
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||| |||||||||||||||||||||||||||| |||||||    
T  11196944 aagacggaaaatcaaacaacgccgcacaagacgacgaacaaca 11196902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 14906960 - 14906994
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||||||||||||||||||||||||||||||||    
T  14906960 aaatcaaacaacgccgcacaagacgacaaacaaca 14906994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 42448056 - 42448098
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||| ||||||||||||||| |||||||    
T  42448056 aagacgaaaaatcaaacaatgccgcacaagacgacgaacaaca 42448098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 28239892 - 28239839
Alignment:
Q  21 caacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacaccgcc 74  Q
    |||||| ||||  |||||||||||||||||||||||||| ||||||| ||||||    
T  28239892 caacaatacgaggaatcaaacaacgccgcacaagacgacgaacaacaaaccgcc 28239839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 8443566 - 8443614
Alignment:
Q  21 caacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||   |||||||||||||||||||||||||| |||||||||    
T  8443566 caacaagacgcggaatcaaacaacgccgcacaagacgacgaacaacaca 8443614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 29617329 - 29617377
Alignment:
Q  21 caacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||  |||||||||| |||||||||||||||| |||||||||    
T  29617329 caacaagacgcgaaatcaaacagcgccgcacaagacgacgaacaacaca 29617377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 34611857 - 34611817
Alignment:
Q  27 gacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||| |||||||||||||||||||||||||||| |||||||    
T  34611857 gacggaaaatcaaacaacgccgcacaagacgacgaacaaca 34611817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 41896535 - 41896499
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||||||||||||||||||| |||||||||    
T  41896535 aaatcaaacaacgccgcacaagacgaccaacaacaca 41896499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 9619394 - 9619428
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  9619394 aaatcaaacaacgccgcacaagacgacgaacaaca 9619428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 11464218 - 11464184
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  11464218 aaatcaaacaacgccgcacaagacgacgaacaaca 11464184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 32724518 - 32724552
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  32724518 aaatcaaacaacgccgcacaagacgacgaacaaca 32724552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 35580512 - 35580470
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||| |||||||||||||| ||||||||||||| |||||||    
T  35580512 aagacggaaaatcaaacaacgtcgcacaagacgacgaacaaca 35580470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 44099971 - 44100005
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  44099971 aaatcaaacaacgccgcacaagacgacgaacaaca 44100005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 15597193 - 15597242
Alignment:
Q  22 aacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacacc 71  Q
    ||||| ||| |||||||| ||| ||| |||||||||||||||||||||||    
T  15597193 aacaaaacggaaaatcaaccaaggcctcacaagacgacaaacaacacacc 15597242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 19876257 - 19876224
Alignment:
Q  34 aatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||||||||||||||||||||||| |||||||    
T  19876257 aatcaaacaacgccgcacaagacgacgaacaaca 19876224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 36033435 - 36033394
Alignment:
Q  24 caagacgaaaaatcaaacaacgccgcacaagacgacaaacaa 65  Q
    ||||||||||||||||| |||| |||||||||| ||||||||    
T  36033435 caagacgaaaaatcaaataacgtcgcacaagacaacaaacaa 36033394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 1236763 - 1236799
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    |||||||||||||||||||||||| || |||||||||    
T  1236763 aaatcaaacaacgccgcacaagacaacgaacaacaca 1236799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 1239463 - 1239499
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||||||||||||||||||  |||||||||    
T  1239463 aaatcaaacaacgccgcacaagacgatgaacaacaca 1239499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 15344331 - 15344295
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||| ||||||||||||||||| |||||||||    
T  15344331 aaatcaaactacgccgcacaagacgacgaacaacaca 15344295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 15433396 - 15433360
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||| ||||||||||||||||| |||||||||    
T  15433396 aaatcaaactacgccgcacaagacgacgaacaacaca 15433360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 15524700 - 15524664
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||| ||||||||||||||||| |||||||||    
T  15524700 aaatcaaactacgccgcacaagacgacgaacaacaca 15524664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 18890770 - 18890806
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  18890770 aaatcaaacaacgtcgcacaagacgacgaacaacaca 18890806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 36532944 - 36532908
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    |||||||||||| |||||||||||||| |||||||||    
T  36532944 aaatcaaacaacaccgcacaagacgacgaacaacaca 36532908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 65
Target Start/End: Complemental strand, 39657472 - 39657440
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaa 65  Q
    ||||||||||||||||||||||||||| |||||    
T  39657472 aaatcaaacaacgccgcacaagacgacgaacaa 39657440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000004; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 32521942 - 32522001
Alignment:
Q  11 atgaacaatacaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacac 70  Q
    |||||||  ||||||| ||| |||||||||||||||||||||||| ||| ||||||||||    
T  32521942 atgaacaccacaacaaaacggaaaatcaaacaacgccgcacaagatgacgaacaacacac 32522001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 6002066 - 6002020
Alignment:
Q  28 acgaaaaatcaaacaacgccgcacaagacgacaaacaacacaccgcc 74  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||    
T  6002066 acgagaaatcaaacaacgccgcacaagacgacgaacaacaaaccgcc 6002020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 46339102 - 46339060
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||| |||||||||||||||||||||||||||| |||||||    
T  46339102 aagacggaaaatcaaacaacgccgcacaagacgacgaacaaca 46339060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 969508 - 969557
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacaccgcc 74  Q
    |||||| ||||||||||||||||||| |||||||| ||||||||| ||||    
T  969508 aagacgcaaaatcaaacaacgccgcaaaagacgacgaacaacacaacgcc 969557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 17611187 - 17611127
Alignment:
Q  11 atgaacaatacaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacacc 71  Q
    ||||||| | |||||||||  ||||||||||||| |||||||||||||| || ||||||||    
T  17611187 atgaacactgcaacaagacagaaaatcaaacaactccgcacaagacgacgaataacacacc 17611127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 22742962 - 22742926
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||||||||||||||||||| |||||||||    
T  22742962 aaatcaaacaacgccgcacaagacgacgaacaacaca 22742926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 24350910 - 24350946
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||||||||||||||||||| |||||||||    
T  24350910 aaatcaaacaacgccgcacaagacgacgaacaacaca 24350946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 28476245 - 28476209
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||||||||||||||||||| |||||||||    
T  28476245 aaatcaaacaacgccgcacaagacgacgaacaacaca 28476209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 1448859 - 1448901
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||    
T  1448859 aagacgagaaatcaaacaacgccgcacaatacgacgaacaaca 1448901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 14627908 - 14627950
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||    
T  14627908 aagacgagaaatcaaacaacgccgcacaatacgacgaacaaca 14627950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 23786623 - 23786581
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||| |||||||||||||||||| |||||||| |||||||    
T  23786623 aagacgagaaatcaaacaacgccgcagaagacgacgaacaaca 23786581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 29844896 - 29844846
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacaccgccg 75  Q
    ||||| ||||||||| |||  |||||||||||||||||||||||| |||||    
T  29844896 aagacaaaaaatcaagcaataccgcacaagacgacaaacaacacaacgccg 29844846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 31235824 - 31235870
Alignment:
Q  28 acgaaaaatcaaacaacgccgcacaagacgacaaacaacacaccgcc 74  Q
    |||| |||||||||||||| |||||||||||| ||||||| ||||||    
T  31235824 acgagaaatcaaacaacgctgcacaagacgacgaacaacaaaccgcc 31235870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 32684708 - 32684674
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  32684708 aaatcaaacaacgccgcacaagacgacgaacaaca 32684674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 35667261 - 35667303
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||| ||||||||| |||||||||||||||||| |||||||    
T  35667261 aagacggaaaatcaaaaaacgccgcacaagacgacgaacaaca 35667303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 42067090 - 42067132
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||| |||||||||| |||||||||||||||| |||||||    
T  42067090 aagacgagaaatcaaacagcgccgcacaagacgacgaacaaca 42067132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 42408410 - 42408368
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||| ||||||||||||||| |||||||||||| |||||||    
T  42408410 aagacggaaaatcaaacaacgctgcacaagacgacgaacaaca 42408368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 42311328 - 42311279
Alignment:
Q  25 aagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacaccgcc 74  Q
    |||||| ||||||||||||||| ||| |||||||| ||||||| ||||||    
T  42311328 aagacggaaaatcaaacaacgctgcataagacgacgaacaacaaaccgcc 42311279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 1749220 - 1749256
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  1749220 aaatcaaacaatgccgcacaagacgacgaacaacaca 1749256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 35132965 - 35132929
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    |||||||||||||||| |||||||||| |||||||||    
T  35132965 aaatcaaacaacgccgaacaagacgacgaacaacaca 35132929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 48930791 - 48930755
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||||||||||||||||||| || ||||||    
T  48930791 aaatcaaacaacgccgcacaagacgacgaataacaca 48930755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 453984 - 453934
Alignment:
Q  21 caacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacacacc 71  Q
    |||||||||  |||||||||||||||||| ||||||||| |||||||||||    
T  453984 caacaagactgaaaatcaaacaacgccgcccaagacgacgaacaacacacc 453934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 6050 - 6014
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    ||||||||||||||||||||||||||| |||||||||    
T  6050 aaatcaaacaacgccgcacaagacgacgaacaacaca 6014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 67
Target Start/End: Original strand, 16359 - 16391
Alignment:
Q  35 atcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||||||||||||||||||||||||||||||    
T  16359 atcaaacaacgccgcacaagacgacaaacaaca 16391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 69
Target Start/End: Complemental strand, 93124 - 93090
Alignment:
Q  35 atcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    |||||||||||||||||||||| ||||||||||||    
T  93124 atcaaacaacgccgcacaagacaacaaacaacaca 93090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 361836 - 361870
Alignment:
Q  33 aaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    ||||||||||||||||||||||||||| |||||||    
T  361836 aaatcaaacaacgccgcacaagacgacgaacaaca 361870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 36711 - 36760
Alignment:
Q  20 acaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaacaca 69  Q
    |||||||||  | |||||||||||| |||||||||||||| |||||||||    
T  36711 acaacaagaaaagaaatcaaacaactccgcacaagacgacgaacaacaca 36760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 5460 - 5404
Alignment:
Q  11 atgaacaatacaacaagacgaaaaatcaaacaacgccgcacaagacgacaaacaaca 67  Q
    |||||||  |||| ||||||  ||| ||||||||||||||||||||||| |||||||    
T  5460 atgaacaccacaagaagacgggaaagcaaacaacgccgcacaagacgacgaacaaca 5404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University