View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13258_high_10 (Length: 249)
Name: NF13258_high_10
Description: NF13258
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13258_high_10 |
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Alignment Details
Target: chr5 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 39732555 - 39732317
Alignment:
| Q |
1 |
ttatctgaaaacttggagaggtaaaacaaataagagtagtcccgcagatgcttagtccagcaatgtagaatggctaaagaagtacatgaacatgattggt |
100 |
Q |
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| T |
39732555 |
ttatctgaaaacttggagaggtaaaacaaataagagtagtcccgcagatgtttagtccagcaatgtagaatggctaaagaagtacatgaacatgattggt |
39732456 |
T |
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| Q |
101 |
gtatatgtcttgagtttgtgaatatgattttgaagttcatgaaccatataccaaaataagcccacataaccgtatcgtaaatcattcatccgtgtttacc |
200 |
Q |
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| T |
39732455 |
gtatatgtcatgagtttgtgaatatgattttgaagttcatgaaccatataccaaaataagcccacataaccgtatcgtaaatcattcatccgtgtttacc |
39732356 |
T |
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| Q |
201 |
agattgacttatggacctttaagttacatattacctatg |
239 |
Q |
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| T |
39732355 |
agattgacttatggacctttaagttacatattacctatg |
39732317 |
T |
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