View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13258_high_3 (Length: 370)

Name: NF13258_high_3
Description: NF13258
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13258_high_3
NF13258_high_3
[»] chr4 (77 HSPs)
chr4 (165-352)||(8065240-8065427)
chr4 (1-110)||(39979726-39979835)
chr4 (1-111)||(48740465-48740575)
chr4 (1-115)||(49812170-49812284)
chr4 (3-115)||(18849813-18849925)
chr4 (3-115)||(41710198-41710310)
chr4 (3-107)||(42024255-42024359)
chr4 (1-115)||(29644296-29644410)
chr4 (1-111)||(44020814-44020924)
chr4 (1-77)||(38976970-38977046)
chr4 (3-115)||(49306528-49306640)
chr4 (3-111)||(54729538-54729645)
chr4 (1-115)||(1825300-1825414)
chr4 (10-115)||(42185857-42185962)
chr4 (10-115)||(47787908-47788013)
chr4 (3-110)||(34791006-34791113)
chr4 (3-110)||(42544155-42544262)
chr4 (1-112)||(51527363-51527473)
chr4 (10-115)||(8294972-8295075)
chr4 (10-113)||(40881257-40881357)
chr4 (3-111)||(41203681-41203790)
chr4 (3-115)||(3685952-3686064)
chr4 (34-114)||(31862736-31862816)
chr4 (1-112)||(35998169-35998281)
chr4 (3-105)||(38319862-38319964)
chr4 (3-92)||(4360462-4360551)
chr4 (42-111)||(34020980-34021049)
chr4 (3-115)||(33047439-33047545)
chr4 (1-111)||(39052953-39053062)
chr4 (1-115)||(51572280-51572393)
chr4 (1-86)||(25149421-25149506)
chr4 (3-115)||(39976444-39976557)
chr4 (3-91)||(22872442-22872530)
chr4 (3-92)||(17237007-17237096)
chr4 (3-92)||(41436445-41436534)
chr4 (3-88)||(42132781-42132866)
chr4 (3-115)||(283531-283643)
chr4 (7-91)||(32559128-32559212)
chr4 (42-110)||(48400724-48400791)
chr4 (42-115)||(29656509-29656583)
chr4 (3-97)||(37315976-37316070)
chr4 (16-110)||(42670437-42670531)
chr4 (65-114)||(8065489-8065538)
chr4 (3-115)||(16493350-16493461)
chr4 (3-111)||(28974252-28974359)
chr4 (1-97)||(29550779-29550875)
chr4 (9-110)||(29815157-29815259)
chr4 (45-112)||(38861328-38861395)
chr4 (3-110)||(43335077-43335184)
chr4 (13-103)||(44633109-44633200)
chr4 (10-110)||(49448785-49448887)
chr4 (10-105)||(54217293-54217388)
chr4 (10-72)||(4357552-4357614)
chr4 (34-115)||(26185129-26185211)
chr4 (37-103)||(28279790-28279856)
chr4 (1-91)||(49401621-49401711)
chr4 (1-104)||(55360400-55360505)
chr4 (3-91)||(22020564-22020653)
chr4 (34-91)||(22496762-22496819)
chr4 (3-91)||(29136843-29136931)
chr4 (62-105)||(36047214-36047257)
chr4 (3-74)||(46958704-46958775)
chr4 (62-105)||(49218896-49218939)
chr4 (3-89)||(18509808-18509894)
chr4 (34-92)||(22129156-22129214)
chr4 (9-79)||(26799276-26799346)
chr4 (62-115)||(5291631-5291683)
chr4 (4-112)||(9052105-9052216)
chr4 (2-91)||(10099778-10099867)
chr4 (62-115)||(28330733-28330786)
chr4 (10-111)||(37309643-37309744)
chr4 (50-115)||(42738433-42738498)
chr4 (66-115)||(47386101-47386149)
chr4 (3-91)||(47846863-47846952)
chr4 (3-92)||(27977107-27977200)
chr4 (3-92)||(38160206-38160297)
chr4 (1-89)||(47277734-47277822)
[»] chr3 (54 HSPs)
chr3 (1-111)||(41031517-41031627)
chr3 (1-115)||(54493850-54493963)
chr3 (3-115)||(39365071-39365183)
chr3 (3-109)||(21296557-21296663)
chr3 (1-115)||(33994598-33994712)
chr3 (3-112)||(5245356-5245465)
chr3 (3-111)||(15280550-15280658)
chr3 (3-115)||(32023155-32023267)
chr3 (3-110)||(26134757-26134864)
chr3 (1-110)||(1334833-1334936)
chr3 (1-110)||(38600858-38600966)
chr3 (1-109)||(49003217-49003325)
chr3 (42-110)||(51164898-51164965)
chr3 (3-115)||(54122278-54122389)
chr3 (1-115)||(30261553-30261668)
chr3 (3-110)||(44234037-44234143)
chr3 (9-115)||(21585470-21585576)
chr3 (1-70)||(32827356-32827425)
chr3 (3-112)||(39866607-39866716)
chr3 (3-92)||(44219087-44219176)
chr3 (42-115)||(48744166-48744239)
chr3 (1-110)||(54021510-54021618)
chr3 (3-115)||(46194260-46194372)
chr3 (61-116)||(43640677-43640732)
chr3 (3-110)||(54845570-54845679)
chr3 (42-111)||(24619005-24619074)
chr3 (2-91)||(37041926-37042018)
chr3 (1-66)||(45392080-45392145)
chr3 (3-115)||(26832012-26832124)
chr3 (3-103)||(39329804-39329904)
chr3 (3-111)||(46786035-46786143)
chr3 (1-89)||(48409551-48409639)
chr3 (3-115)||(9017740-9017854)
chr3 (1-115)||(54458361-54458476)
chr3 (9-115)||(42547166-42547272)
chr3 (3-115)||(2868515-2868627)
chr3 (1-97)||(53050985-53051081)
chr3 (3-82)||(1923064-1923143)
chr3 (4-103)||(50736054-50736153)
chr3 (4-103)||(50776702-50776801)
chr3 (34-92)||(8706112-8706170)
chr3 (34-92)||(9057999-9058057)
chr3 (34-107)||(26142855-26142928)
chr3 (10-91)||(39825790-39825871)
chr3 (42-110)||(3862265-3862332)
chr3 (3-71)||(9218130-9218198)
chr3 (60-115)||(3547701-3547756)
chr3 (62-105)||(36790986-36791029)
chr3 (42-112)||(7885653-7885722)
chr3 (45-115)||(51636985-51637055)
chr3 (3-57)||(52325176-52325230)
chr3 (3-115)||(12744754-12744867)
chr3 (3-115)||(36097709-36097822)
chr3 (3-59)||(43639570-43639626)
[»] chr7 (56 HSPs)
chr7 (3-115)||(2846730-2846842)
chr7 (1-115)||(34963863-34963977)
chr7 (1-110)||(31581495-31581604)
chr7 (1-110)||(30462962-30463071)
chr7 (3-115)||(29257488-29257600)
chr7 (3-115)||(46288485-46288597)
chr7 (1-115)||(5724759-5724873)
chr7 (3-115)||(7425932-7426045)
chr7 (3-115)||(11616502-11616615)
chr7 (3-111)||(29434634-29434742)
chr7 (3-115)||(40590879-40590991)
chr7 (42-115)||(39693732-39693805)
chr7 (1-110)||(47453950-47454059)
chr7 (7-111)||(33584508-33584612)
chr7 (1-112)||(36117606-36117716)
chr7 (3-115)||(44604531-44604643)
chr7 (1-110)||(23703861-23703971)
chr7 (9-114)||(38181934-38182039)
chr7 (10-111)||(45890898-45890998)
chr7 (1-70)||(48981642-48981711)
chr7 (2-97)||(30659533-30659628)
chr7 (1-111)||(28333116-28333226)
chr7 (3-112)||(33774097-33774204)
chr7 (34-112)||(46095533-46095611)
chr7 (1-114)||(37496449-37496562)
chr7 (12-111)||(12308324-12308422)
chr7 (1-115)||(32775923-32776038)
chr7 (12-115)||(40803689-40803792)
chr7 (1-115)||(37157112-37157225)
chr7 (3-97)||(37264272-37264366)
chr7 (1-79)||(49100554-49100634)
chr7 (48-111)||(5083573-5083636)
chr7 (34-109)||(40038196-40038270)
chr7 (42-104)||(8149911-8149973)
chr7 (1-82)||(38589708-38589789)
chr7 (66-115)||(48981320-48981369)
chr7 (1-97)||(2849214-2849310)
chr7 (3-91)||(10355789-10355877)
chr7 (3-67)||(23186197-23186261)
chr7 (1-104)||(5068350-5068453)
chr7 (1-79)||(18235166-18235245)
chr7 (1-115)||(3667929-3668043)
chr7 (42-111)||(7456680-7456749)
chr7 (9-91)||(14648979-14649063)
chr7 (34-91)||(23111615-23111672)
chr7 (1-97)||(39343723-39343819)
chr7 (10-90)||(39498640-39498720)
chr7 (62-110)||(40023839-40023887)
chr7 (10-57)||(25778743-25778790)
chr7 (3-70)||(37490672-37490739)
chr7 (1-85)||(18731413-18731494)
chr7 (1-115)||(34064156-34064270)
chr7 (59-100)||(21387716-21387757)
chr7 (62-111)||(27621779-27621828)
chr7 (42-110)||(27242823-27242891)
chr7 (1-97)||(27337925-27338020)
[»] chr6 (23 HSPs)
chr6 (1-115)||(15081364-15081478)
chr6 (3-115)||(30064003-30064115)
chr6 (1-108)||(7301132-7301239)
chr6 (3-115)||(3604654-3604766)
chr6 (1-111)||(31265725-31265834)
chr6 (1-112)||(33109317-33109428)
chr6 (9-97)||(9755207-9755294)
chr6 (1-91)||(2657866-2657956)
chr6 (1-115)||(33921521-33921635)
chr6 (34-115)||(4238363-4238444)
chr6 (3-94)||(26356232-26356322)
chr6 (10-92)||(2310349-2310431)
chr6 (50-111)||(34915903-34915964)
chr6 (1-89)||(3166160-3166248)
chr6 (9-98)||(6787253-6787342)
chr6 (3-104)||(15321279-15321380)
chr6 (3-92)||(15371917-15372006)
chr6 (62-105)||(4552853-4552896)
chr6 (42-97)||(8232403-8232458)
chr6 (1-76)||(33017996-33018071)
chr6 (60-115)||(34703561-34703616)
chr6 (2-92)||(31723458-31723548)
chr6 (34-92)||(34803792-34803850)
[»] chr5 (52 HSPs)
chr5 (3-115)||(11099532-11099644)
chr5 (7-110)||(4412329-4412432)
chr5 (3-115)||(35334581-35334693)
chr5 (3-115)||(42575693-42575805)
chr5 (1-102)||(20189846-20189947)
chr5 (1-110)||(25814310-25814419)
chr5 (1-115)||(39008070-39008183)
chr5 (1-97)||(7613666-7613762)
chr5 (3-107)||(35646144-35646248)
chr5 (3-110)||(13135699-13135806)
chr5 (1-115)||(5357870-5357984)
chr5 (3-110)||(17243009-17243115)
chr5 (3-114)||(33012296-33012407)
chr5 (1-115)||(33988140-33988255)
chr5 (5-115)||(3725128-3725237)
chr5 (1-115)||(6610776-6610892)
chr5 (42-111)||(13716955-13717024)
chr5 (34-110)||(858281-858357)
chr5 (13-111)||(15814608-15814703)
chr5 (1-115)||(4044530-4044643)
chr5 (42-112)||(8692912-8692982)
chr5 (2-112)||(41184061-41184171)
chr5 (3-115)||(8369751-8369864)
chr5 (3-109)||(22582927-22583032)
chr5 (3-112)||(42211276-42211386)
chr5 (3-115)||(72160-72272)
chr5 (48-115)||(7276324-7276391)
chr5 (3-115)||(39212606-39212724)
chr5 (10-115)||(34534865-34534968)
chr5 (3-89)||(39183682-39183767)
chr5 (12-97)||(4194599-4194684)
chr5 (3-115)||(4475186-4475299)
chr5 (62-115)||(9426667-9426720)
chr5 (62-115)||(13597970-13598023)
chr5 (42-111)||(14259612-14259681)
chr5 (62-115)||(20369216-20369269)
chr5 (42-111)||(30437835-30437904)
chr5 (34-115)||(39035941-39036021)
chr5 (34-98)||(31090262-31090326)
chr5 (62-105)||(13016478-13016521)
chr5 (62-105)||(13087856-13087899)
chr5 (42-105)||(24534553-24534616)
chr5 (10-110)||(36469156-36469260)
chr5 (37-92)||(42818868-42818923)
chr5 (3-85)||(7179535-7179617)
chr5 (3-105)||(15898143-15898244)
chr5 (42-103)||(6629487-6629548)
chr5 (42-98)||(14184142-14184199)
chr5 (1-70)||(25111201-25111270)
chr5 (1-70)||(25170292-25170361)
chr5 (67-115)||(38978696-38978744)
chr5 (79-115)||(41686622-41686658)
[»] chr8 (59 HSPs)
chr8 (5-115)||(33190965-33191075)
chr8 (1-115)||(38252490-38252604)
chr8 (1-112)||(29615742-29615853)
chr8 (1-115)||(44790474-44790589)
chr8 (2-100)||(32967330-32967428)
chr8 (3-111)||(5391993-5392102)
chr8 (1-112)||(34287131-34287242)
chr8 (1-107)||(22325007-22325113)
chr8 (3-110)||(32241478-32241585)
chr8 (3-115)||(39171484-39171596)
chr8 (1-111)||(2349295-2349405)
chr8 (1-111)||(34133072-34133182)
chr8 (3-115)||(5962527-5962640)
chr8 (3-115)||(2195409-2195521)
chr8 (3-115)||(42412437-42412549)
chr8 (1-111)||(12653632-12653742)
chr8 (10-115)||(32231781-32231886)
chr8 (3-112)||(42558635-42558744)
chr8 (3-111)||(9014545-9014653)
chr8 (3-115)||(14689901-14690013)
chr8 (3-111)||(28802712-28802820)
chr8 (3-86)||(33925138-33925221)
chr8 (3-110)||(44615419-44615526)
chr8 (3-115)||(21587217-21587330)
chr8 (34-112)||(31132673-31132752)
chr8 (3-110)||(31410662-31410769)
chr8 (3-105)||(886502-886604)
chr8 (42-115)||(13085044-13085117)
chr8 (3-115)||(10728976-10729087)
chr8 (34-97)||(36012057-36012120)
chr8 (34-97)||(45421025-45421088)
chr8 (42-115)||(2119657-2119730)
chr8 (3-103)||(2796992-2797093)
chr8 (3-91)||(14748760-14748849)
chr8 (1-98)||(41726479-41726576)
chr8 (42-110)||(4274392-4274460)
chr8 (3-110)||(45425429-45425538)
chr8 (1-105)||(8418354-8418461)
chr8 (66-115)||(34133022-34133071)
chr8 (35-92)||(42797773-42797830)
chr8 (63-115)||(138974-139026)
chr8 (42-101)||(4480536-4480596)
chr8 (3-67)||(22490380-22490444)
chr8 (9-97)||(28791267-28791355)
chr8 (9-110)||(33826181-33826278)
chr8 (42-115)||(43844975-43845050)
chr8 (9-92)||(7258427-7258509)
chr8 (63-110)||(29730982-29731029)
chr8 (34-97)||(32678994-32679057)
chr8 (12-103)||(38201454-38201544)
chr8 (34-92)||(2875171-2875229)
chr8 (13-91)||(3442449-3442526)
chr8 (10-92)||(8618092-8618174)
chr8 (42-92)||(12958275-12958325)
chr8 (1-103)||(14117415-14117517)
chr8 (3-77)||(27868379-27868453)
chr8 (8-90)||(33746278-33746359)
chr8 (36-97)||(8566493-8566554)
chr8 (62-110)||(26570272-26570320)
[»] chr1 (76 HSPs)
chr1 (1-114)||(19532972-19533085)
chr1 (10-115)||(27698753-27698858)
chr1 (1-111)||(36467248-36467358)
chr1 (1-111)||(49494216-49494325)
chr1 (7-115)||(8327658-8327766)
chr1 (3-115)||(45889303-45889415)
chr1 (2-115)||(51848748-51848863)
chr1 (1-115)||(28277091-28277205)
chr1 (1-111)||(4466207-4466317)
chr1 (1-115)||(7785327-7785440)
chr1 (2-112)||(28908037-28908147)
chr1 (3-112)||(28839284-28839392)
chr1 (3-115)||(3555610-3555722)
chr1 (3-111)||(46536285-46536393)
chr1 (1-109)||(48242643-48242751)
chr1 (3-115)||(51749238-51749350)
chr1 (1-115)||(2219501-2219614)
chr1 (1-110)||(52830467-52830575)
chr1 (3-115)||(29225694-29225806)
chr1 (3-111)||(46495963-46496071)
chr1 (3-110)||(11324194-11324301)
chr1 (3-110)||(11482215-11482322)
chr1 (9-111)||(38664346-38664448)
chr1 (3-111)||(17342773-17342881)
chr1 (2-89)||(36232843-36232930)
chr1 (42-112)||(6784947-6785017)
chr1 (1-115)||(11425922-11426036)
chr1 (1-110)||(16040023-16040132)
chr1 (42-115)||(32347885-32347958)
chr1 (42-111)||(36784259-36784328)
chr1 (42-111)||(43895792-43895861)
chr1 (3-111)||(17724769-17724877)
chr1 (4-115)||(5040631-5040742)
chr1 (3-92)||(2886135-2886224)
chr1 (10-115)||(24131462-24131567)
chr1 (2-63)||(26755969-26756030)
chr1 (3-111)||(5442286-5442393)
chr1 (22-110)||(7787623-7787711)
chr1 (42-110)||(10370281-10370349)
chr1 (3-115)||(8773179-8773295)
chr1 (34-89)||(30749722-30749777)
chr1 (34-89)||(30771173-30771228)
chr1 (1-103)||(12267684-12267786)
chr1 (9-111)||(26583673-26583775)
chr1 (12-110)||(49944737-49944833)
chr1 (1-71)||(50267491-50267561)
chr1 (1-91)||(52432277-52432367)
chr1 (3-97)||(29756197-29756293)
chr1 (1-111)||(46880364-46880470)
chr1 (34-97)||(16451590-16451653)
chr1 (34-97)||(16460743-16460806)
chr1 (34-105)||(18186292-18186362)
chr1 (3-97)||(27831804-27831899)
chr1 (3-110)||(34877145-34877251)
chr1 (3-85)||(29225463-29225544)
chr1 (3-77)||(37525031-37525104)
chr1 (1-110)||(3718902-3719010)
chr1 (42-115)||(26760098-26760171)
chr1 (42-115)||(26924363-26924436)
chr1 (3-115)||(35622834-35622946)
chr1 (1-89)||(20988535-20988623)
chr1 (3-91)||(37925301-37925389)
chr1 (9-84)||(10587642-10587717)
chr1 (42-97)||(30903321-30903376)
chr1 (1-115)||(705402-705516)
chr1 (42-88)||(27143290-27143336)
chr1 (42-92)||(31798382-31798432)
chr1 (42-112)||(35705259-35705329)
chr1 (13-90)||(42309397-42309475)
chr1 (61-110)||(1859453-1859502)
chr1 (3-92)||(33149238-33149326)
chr1 (1-92)||(37541166-37541261)
chr1 (34-110)||(52146741-52146822)
chr1 (1-45)||(5563025-5563069)
chr1 (1-57)||(25842598-25842654)
chr1 (62-110)||(51049455-51049503)
[»] chr2 (59 HSPs)
chr2 (1-112)||(28108427-28108539)
chr2 (3-111)||(41436024-41436132)
chr2 (1-111)||(28925900-28926010)
chr2 (3-111)||(3100345-3100453)
chr2 (3-107)||(15859396-15859500)
chr2 (1-115)||(43077778-43077891)
chr2 (3-110)||(7650029-7650136)
chr2 (1-92)||(30757620-30757711)
chr2 (1-115)||(7213416-7213530)
chr2 (34-115)||(33751402-33751483)
chr2 (1-109)||(33880106-33880213)
chr2 (10-111)||(42881338-42881439)
chr2 (3-115)||(5212012-5212124)
chr2 (17-115)||(40964994-40965091)
chr2 (34-115)||(9724822-9724902)
chr2 (1-110)||(28526910-28527019)
chr2 (34-109)||(14136711-14136786)
chr2 (10-115)||(28572152-28572254)
chr2 (3-114)||(37247938-37248049)
chr2 (3-97)||(4794529-4794626)
chr2 (10-89)||(8031708-8031787)
chr2 (3-111)||(44534537-44534649)
chr2 (42-111)||(3123588-3123657)
chr2 (9-98)||(5425815-5425904)
chr2 (1-109)||(24775860-24775968)
chr2 (9-89)||(31348478-31348558)
chr2 (1-92)||(37529123-37529214)
chr2 (10-111)||(3199838-3199944)
chr2 (42-111)||(10818565-10818635)
chr2 (3-110)||(28301384-28301487)
chr2 (44-110)||(44194598-44194663)
chr2 (3-115)||(18181267-18181380)
chr2 (10-110)||(19009791-19009892)
chr2 (1-89)||(1908546-1908634)
chr2 (1-97)||(24356070-24356166)
chr2 (3-115)||(31592492-31592603)
chr2 (42-110)||(36103543-36103610)
chr2 (34-97)||(7931581-7931644)
chr2 (10-97)||(13222027-13222114)
chr2 (1-92)||(435130-435227)
chr2 (3-97)||(10069639-10069733)
chr2 (66-111)||(13375591-13375636)
chr2 (42-115)||(14284367-14284439)
chr2 (46-111)||(38873017-38873082)
chr2 (1-57)||(2756673-2756729)
chr2 (1-77)||(7648918-7648993)
chr2 (10-110)||(8385022-8385121)
chr2 (3-91)||(23684925-23685012)
chr2 (34-98)||(31546103-31546167)
chr2 (7-75)||(44736700-44736768)
chr2 (10-89)||(19515848-19515927)
chr2 (10-89)||(43182241-43182320)
chr2 (2-89)||(44284372-44284459)
chr2 (34-92)||(5007627-5007685)
chr2 (9-114)||(24451725-24451831)
chr2 (3-89)||(39095599-39095684)
chr2 (3-57)||(44424317-44424371)
chr2 (3-67)||(6075487-6075551)
chr2 (9-97)||(9472381-9472469)
[»] scaffold0001 (1 HSPs)
scaffold0001 (3-112)||(394723-394831)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-77)||(14435-14511)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-77)||(26301-26377)
[»] scaffold0321 (1 HSPs)
scaffold0321 (34-114)||(9634-9714)
[»] scaffold0007 (2 HSPs)
scaffold0007 (7-111)||(230202-230305)
scaffold0007 (33-110)||(157973-158050)
[»] scaffold0006 (1 HSPs)
scaffold0006 (3-115)||(229765-229876)
[»] scaffold0221 (1 HSPs)
scaffold0221 (3-74)||(8869-8940)
[»] scaffold0034 (1 HSPs)
scaffold0034 (2-77)||(98805-98879)
[»] scaffold0028 (1 HSPs)
scaffold0028 (3-114)||(26550-26666)
[»] scaffold0086 (1 HSPs)
scaffold0086 (1-110)||(5765-5873)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-114)||(171169-171281)
[»] scaffold0155 (1 HSPs)
scaffold0155 (1-92)||(8006-8097)
[»] scaffold0578 (1 HSPs)
scaffold0578 (34-92)||(3993-4051)
[»] scaffold0009 (1 HSPs)
scaffold0009 (51-112)||(219947-220008)


Alignment Details
Target: chr4 (Bit Score: 180; Significance: 4e-97; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 165 - 352
Target Start/End: Complemental strand, 8065427 - 8065240
Alignment:
Q  165 tattatatacaaatgattgcatgccgtggccttccctagtcatagcatagctccaccaccgggactcggaagaaaacggtgcccttaacattaattttga 264  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8065427 tattatatacaaatgattgcatgccgtggccttccctagtcatagcatagctccaccaccgggactcggaagaaaacggtgcccttaacattaattttga 8065328  T
Q  265 tgactcaaaagaagaggttgatctagaaggtaattttgctaaggaagtagatgacaaacctattcatgagggtgaaggttgtatggat 352  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  8065327 tgactcaaaagaagaggttgatctagaaggtaattttgctaaggaagtagatgaaaaacctattcattagggtgaaggttgtatggat 8065240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 39979835 - 39979726
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||||||||||||||||||||||||||  ||||| | |||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| |||    
T  39979835 gtaaagtggaatatattgaattggaaatgatgaaagtaatattaattagagttataaaggggaaaaagtaattaatattgtattgaaaagtgaaataact 39979736  T
Q  101 caattatttt 110  Q
    ||||||||||    
T  39979735 caattatttt 39979726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 48740575 - 48740465
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||||||||||||||||||  |||||||  ||||| | |||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||    
T  48740575 gtaaagtggaatatattgaattaaaaatgataaaagtaatattaattagagttataaagggaaaaaagtaattaatattgttttgaaaagtgaaatgact 48740476  T
Q  101 caattattttg 111  Q
    || ||||||||    
T  48740475 cagttattttg 48740465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 49812284 - 49812170
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||||||||||||| ||||| || |||  || |||| |||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  49812284 gtaaagtggaatatattgtattgggaaagatgaaaatagtattaattagagttataaagggaaaaaaataattaatattgtattgaaaagtgaaatgact 49812185  T
Q  101 caattattttgggac 115  Q
    || ||||||||||||    
T  49812184 cagttattttgggac 49812170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 18849813 - 18849925
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||| ||||||||||||||||| |  |  ||||| | |||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||    
T  18849813 aaagtgaaatatattgaattggaagttgtgaaagtaatattaattagagttataaagggaaaaaagtaattaatattttattgaaaagtgaaatgactca 18849912  T
Q  103 attattttgggac 115  Q
     ||||||||||||    
T  18849913 gttattttgggac 18849925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 41710198 - 41710310
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||| | ||||  ||||| | |||||||||||||||||||||||||||||||||||  |||||||||||||| |||  ||||    
T  41710198 aaagtggaatatattgaattgggagtgatgaaagtaatattaattagagttataaagggaaaaaagtaattaatgatgtattgaaaagtgaaatagctca 41710297  T
Q  103 attattttgggac 115  Q
     ||||||||||||    
T  41710298 cttattttgggac 41710310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 42024255 - 42024359
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||||| ||||  ||||||| ||||||| |||||||||||||||||| ||||||||  |||||||||||||| |||||||||    
T  42024255 aaagtggaatatattgaattggaagtgatgaaagtagtattaattatagttataaagggaaaaaaataattaatgatgtattgaaaagtgaaatgactca 42024354  T
Q  103 attat 107  Q
     ||||    
T  42024355 tttat 42024359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 29644410 - 29644296
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||| |||||||||||||||  ||||||  ||||||| ||||||| ||||||||| |||||||||| ||||||| |||||||||||||| |||| ||    
T  29644410 gtaaagtagaatatattgaattgagaatgatgaaagtagtattaattatagttataaaaggaaaaaagttattaatattgtattgaaaagtgaaatgtct 29644311  T
Q  101 caattattttgggac 115  Q
    || ||||||||||||    
T  29644310 cagttattttgggac 29644296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 44020814 - 44020924
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||||||| |||||||||| ||||||||  ||||||| || ||||||||||||||| ||||||||||||||||| ||||| |||||||  ||||| |    
T  44020814 gtaaagtggaacatattgaattagaaatgatgaaagtagtattgattagagttataaagagaaaaaagtaattaatattgtatcgaaaagtaaaatgatt 44020913  T
Q  101 caattattttg 111  Q
    |||||||||||    
T  44020914 caattattttg 44020924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 38977046 - 38976970
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaata 77  Q
    ||||||||||||||||||||||| |||||||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  38977046 gtaaagtggaatatattgaattgaaaatgatgaaagtagtattaattagagttataaagggaaaaaagtaattaata 38976970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 49306640 - 49306528
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||| | | ||||  ||||||| ||||||||||||||||||| |||||| ||||||||  |||||||||||||| |||| ||||    
T  49306640 aaagtggaatatattgaattaggagtgatgaaagtagtattaattagagttataaaggaaaaaaaataattaatgatgtattgaaaagtgaaatggctca 49306541  T
Q  103 attattttgggac 115  Q
     ||||||||||||    
T  49306540 cttattttgggac 49306528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 54729538 - 54729645
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||||||||||||||||||| |  ||||  ||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| |||    
T  54729538 aaagtggaatatattgaattg-aggtgatgaaagtagtattaattagagttataaagggaaaaaagtaattaatattgtattggaaagtgaaatgattca 54729636  T
Q  103 attattttg 111  Q
     ||||||||    
T  54729637 gttattttg 54729645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 1825300 - 1825414
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||||||||||||||||||| |||||||  || || | |||||||||||||||||  ||||||| ||||||||| | |||||||||||| |||||||    
T  1825300 gtaaagtggaatatattgaattgaaaatgatgaaaataatattaattagagttataaaaagaaaaaaataattaatattatattgaaaagtgaaatgact 1825399  T
Q  101 caattattttgggac 115  Q
    || ||||||| ||||    
T  1825400 cagttattttaggac 1825414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 42185857 - 42185962
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattt 109  Q
    ||||||||||||||  | ||||  ||||||| ||||||||||||||||| |||||||||||||||||  |||||||||||||  ||||||||| ||||||    
T  42185857 aatatattgaattgagagtgatgaaagtagtattaattagagttataaatggaaaaaagtaattaatgatgtattgaaaagtaaaatgactcacttattt 42185956  T
Q  110 tgggac 115  Q
    ||||||    
T  42185957 tgggac 42185962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 47787908 - 47788013
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattt 109  Q
    ||||||| |||||| |||||||  ||||||| ||||||||||||||||| | |||||||||||||||| |||||||||||||   |||||| ||||||||    
T  47787908 aatatatggaattgaaaatgatgaaagtagtattaattagagttataaaagaaaaaaagtaattaatattgtattgaaaagttatatgacttaattattt 47788007  T
Q  110 tgggac 115  Q
    ||||||    
T  47788008 tgggac 47788013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 34791006 - 34791113
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||| |||||||||||||||  | ||||  | ||||| ||||||||||||||||||| |||||||||||||||| |||||| ||||||  |||||||||    
T  34791006 aaagtagaatatattgaattgagagtgataaatgtagtattaattagagttataaaggaaaaaaagtaattaatattgtattaaaaagtaaaatgactca 34791105  T
Q  103 attatttt 110  Q
    ||||||||    
T  34791106 attatttt 34791113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 42544262 - 42544155
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||  | ||||  ||||| | ||||||||||||||||||| ||||||||| |||||  |||||||||||||| |||||||||    
T  42544262 aaagtggaatatattgaattgtgagtgataaaagtaatattaattagagttataaaggaaaaaaagtagttaatgatgtattgaaaagtgaaatgactca 42544163  T
Q  103 attatttt 110  Q
     |||||||    
T  42544162 tttatttt 42544155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 51527473 - 51527363
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||| |||||||||||||| |||||||  || || | ||||||||||||||||| |||||||||||||||||| |||||| ||||||| |||||||    
T  51527473 gtaaagtgaaatatattgaattgaaaatgatgaaa-taatattaattagagttataaaaggaaaaaagtaattaatattgtattaaaaagtgaaatgact 51527375  T
Q  101 caattattttgg 112  Q
    || ||| |||||    
T  51527374 cagttactttgg 51527363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 8295075 - 8294972
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattt 109  Q
    ||||||||||||||| |  |||  ||||||| | ||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||  ||||||    
T  8295075 aatatattgaattggga--gatgaaagtagtataaattagagttataaagggaaaaaggtaattaatattgtattgaaaagtgaaatgactcggttattt 8294978  T
Q  110 tgggac 115  Q
    ||||||    
T  8294977 tgggac 8294972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 113
Target Start/End: Original strand, 40881257 - 40881357
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattt 109  Q
    ||||||||||||| |||||||   ||||||| || |||||||||||||| ||||||||||||||| || |||||||||||||| ||||||||  ||||||    
T  40881257 aatatattgaattagaaatga---aagtagtatttattagagttataaaaggaaaaaagtaattactattgtattgaaaagtgaaatgactcggttattt 40881353  T
Q  110 tggg 113  Q
    ||||    
T  40881354 tggg 40881357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 41203790 - 41203681
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttat-aaagggaaaaaagtaattaatactgtattgaaaagtggaatgactc 101  Q
    ||||||||||||||||||||| || ||||  ||||||| |||||||||||||| ||| | |||||||||||||||| |||||||| ||||| ||||||||    
T  41203790 aaagtggaatatattgaattgaaagtgataaaagtagtattaattagagttataaaatgaaaaaaagtaattaatattgtattgataagtgaaatgactc 41203691  T
Q  102 aattattttg 111  Q
    | ||| ||||    
T  41203690 agttagtttg 41203681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 3686064 - 3685952
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||| |||||||||||||||  | ||||  ||||| | |||||||||||||||||||| ||||| ||||||||| ||||||| |||||| |||||||||    
T  3686064 aaagttgaatatattgaattgagagtgatgaaagtaatattaattagagttataaaggggaaaaaataattaatattgtattggaaagtgaaatgactca 3685965  T
Q  103 attattttgggac 115  Q
     ||||||| ||||    
T  3685964 gttattttaggac 3685952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 114
Target Start/End: Complemental strand, 31862816 - 31862736
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttggga 114  Q
    ||||||| |||||||||||||||||||||||||| |||||||||  ||||||||||||| ||||||||  |||||||||||    
T  31862816 aagtagtattaattagagttataaagggaaaaaaataattaatatcgtattgaaaagtgaaatgactcggttattttggga 31862736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 35998169 - 35998281
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaa-agtaattaatactgtattgaaaagtggaatgac 99  Q
    |||||||  ||||||||||||||  | || |  ||||||| ||||||||||||||||||||||||| | ||||||||| ||||| |||||||| ||||||    
T  35998169 gtaaagtaaaatatattgaattgagagtggtgaaagtagtattaattagagttataaagggaaaaataataattaatattgtatcgaaaagtgaaatgac 35998268  T
Q  100 tcaattattttgg 112  Q
    |||||||||||||    
T  35998269 tcaattattttgg 35998281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 38319964 - 38319862
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||| |||||||||||||||  | ||||  ||||||| |||||||| |||||||  |||||||||||||||||| |||||||||||||| ||||| |||    
T  38319964 aaagtagaatatattgaattgagagtgatgaaagtagtattaattagtgttataattggaaaaaagtaattaatattgtattgaaaagtgaaatgagtca 38319865  T
Q  103 att 105  Q
    |||    
T  38319864 att 38319862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 4360462 - 4360551
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtg 92  Q
    |||||||||||||||||||||  ||||||  ||||||| |||||||||||||||   |||||||||||||||||  ||||||||||||||    
T  4360462 aaagtggaatatattgaattgtgaatgatgaaagtagtattaattagagttatatttggaaaaaagtaattaatgttgtattgaaaagtg 4360551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 34021049 - 34020980
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttg 111  Q
    |||||||||||||||||||||||||| ||||| ||| |||||||||||||| ||||||||| ||||||||    
T  34021049 ttaattagagttataaagggaaaaaaataatttatattgtattgaaaagtgaaatgactcacttattttg 34020980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 33047545 - 33047439
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||||| ||||   |||| ||   ||||||||||||||   ||||| |||||||||| |||||||||||||| |||||||||    
T  33047545 aaagtggaatatattgaattggaagtgatgatagtattg---attagagttataaa---aaaaatgtaattaatattgtattgaaaagtgaaatgactca 33047452  T
Q  103 attattttgggac 115  Q
     ||||||||||||    
T  33047451 gttattttgggac 33047439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 39052953 - 39053062
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||| |||||||||||||||  | || |  ||||||| ||||||||||||||||| |||||||| || |||||| | |||||||||||| |||| ||    
T  39052953 gtaaagtagaatatattgaattgagagtggtgaaagtagtattaattagagttataaaaggaaaaaa-tagttaatattatattgaaaagtgaaatggct 39053051  T
Q  101 caattattttg 111  Q
    |||||||||||    
T  39053052 caattattttg 39053062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 51572280 - 51572393
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||| ||||||||||||||||| ||||  ||||||| ||||||||||||||||    ||||||  |||||||| |||||||||||||| ||| | |    
T  51572280 gtaaagtgtaatatattgaattggaagtgataaaagtagtattaattagagttataattaaaaaaaaa-aattaatattgtattgaaaagtgaaataagt 51572378  T
Q  101 caattattttgggac 115  Q
    |||||||||| ||||    
T  51572379 caattattttaggac 51572393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 25149506 - 25149421
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattga 86  Q
    |||||||||||||||||||||||||| |  |  ||||||| ||||||||||||||||  |||||||||||||||||  ||||||||    
T  25149506 gtaaagtggaatatattgaattggaagttgtgaaagtagtattaattagagttataattggaaaaaagtaattaatgttgtattga 25149421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 39976444 - 39976557
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaa-aagtaattaatactgtattgaaaagtggaatgactc 101  Q
    |||||||||||||||||||||  | ||||  ||||||| ||||| || ||||||||| ||||| |||||||||||| || |||||||| || ||||||||    
T  39976444 aaagtggaatatattgaattgagagtgatgaaagtagtattaatcagtgttataaagagaaaaaaagtaattaatattgcattgaaaaatgaaatgactc 39976543  T
Q  102 aattattttgggac 115  Q
    |  |||||||||||    
T  39976544 agatattttgggac 39976557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 22872442 - 22872530
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagt 91  Q
    |||||||||||||||||||||  | ||||  ||||| | ||||||||||||||||  |||||||||||||||||| || ||||||||||    
T  22872442 aaagtggaatatattgaattgagagtgatgaaagtaatattaattagagttataattggaaaaaagtaattaatattgcattgaaaagt 22872530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 17237096 - 17237007
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtg 92  Q
    ||||||||||||||||||||| ||  |||  ||||||| ||||||||||||||||  | |||||| ||||||||| | ||||||||||||    
T  17237096 aaagtggaatatattgaattgaaagcgatgaaagtagtattaattagagttataattgaaaaaaattaattaatattatattgaaaagtg 17237007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 41436534 - 41436445
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtg 92  Q
    ||||| |||||| ||||||||  ||||||  ||||||| ||||||||||||||||   ||||||| ||||||||| ||||||||||||||    
T  41436534 aaagtagaatattttgaattgcgaatgatgaaagtagtattaattagagttataattagaaaaaaataattaatattgtattgaaaagtg 41436445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 42132866 - 42132781
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaa 88  Q
    ||||| |||||||||||||||||| || |  ||||| | |||||||| |||||||  |||||||||||||||||| ||||||||||    
T  42132866 aaagtagaatatattgaattggaagtggtgaaagtaatattaattagtgttataattggaaaaaagtaattaatattgtattgaaa 42132781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 283531 - 283643
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||| ||||||| | ||||  ||||||| ||||| ||  || ||||| ||||||||||||||||| || ||||||||||| |||| || |    
T  283531 aaagtggaatatatagaattgggagtgatgaaagtagtattaatcagcattctaaagagaaaaaagtaattaatattgcattgaaaagtgaaatggctta 283630  T
Q  103 attattttgggac 115  Q
      |||||||||||    
T  283631 gatattttgggac 283643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 32559212 - 32559128
Alignment:
Q  7 tggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagt 91  Q
    ||||||||||| |||| | | ||||  ||||||| ||||||||||||||||| || | ||||||||||||| |||||||||||||    
T  32559212 tggaatatattaaattaggagtgatgaaagtagtattaattagagttataaaagggagaaagtaattaatattgtattgaaaagt 32559128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 48400724 - 48400791
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattatttt 110  Q
    |||||||||||  |||| |||||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  48400724 ttaattagagtcgtaaaaggaaaa-agtaattaatattgtattgaaaagtgaaatgactcaattatttt 48400791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 29656583 - 29656509
Alignment:
Q  42 ttaattagagttataaagggaaaaaag-taattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    ||||||||||||||||||||||||||  ||||||||  |||||||||||||| ||||  ||| ||||||||||||    
T  29656583 ttaattagagttataaagggaaaaaaaataattaatgatgtattgaaaagtgaaatggttcacttattttgggac 29656509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 37315976 - 37316070
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatg 97  Q
    ||||| |||||| ||||||||| | || |  ||||||| |||||||| |||||||  ||||||| |||||||||| |||||||||||||| ||||    
T  37315976 aaagtagaatatgttgaattgggagtggtgaaagtagtattaattagtgttataattggaaaaatgtaattaatattgtattgaaaagtgaaatg 37316070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 42670437 - 42670531
Alignment:
Q  16 ttgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattatttt 110  Q
    ||||||||||||| ||  ||||| | ||||||| ||||||||||| ||||| |||||||||| |||||||||| ||| |||| || | |||||||    
T  42670437 ttgaattggaaattatgaaagtaatattaattaaagttataaaggaaaaaatgtaattaatattgtattgaaaggtgaaatggctaagttatttt 42670531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 8065538 - 8065489
Alignment:
Q  65 aaagtaattaatactgtattgaaaagtggaatgactcaattattttggga 114  Q
    ||||||||||||| |||||||||||||||||||||||  |||||||||||    
T  8065538 aaagtaattaatattgtattgaaaagtggaatgactcggttattttggga 8065489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 16493350 - 16493461
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||||| | ||  ||||| | ||||||||||||||| || || |||  |  || ||||| |||||||||||  ||||||||     
T  16493350 aaagtggaatatattgaattggaagttatgaaagtaatattaattagagttatagagagagaaattttttttatactatattgaaaagtaaaatgactc- 16493448  T
Q  103 attattttgggac 115  Q
    |||||||||||||    
T  16493449 attattttgggac 16493461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 28974359 - 28974252
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||| ||||||||||||| ||  | ||||  ||||||| ||||| ||| ||||||| | |||||| || |||||| |||||||||||||| |||||||||    
T  28974359 aaaggggaatatattgaaatgagagtgatgaaagtagtattaatcagaattataaatgaaaaaaatta-ttaatattgtattgaaaagtgaaatgactca 28974261  T
Q  103 attattttg 111  Q
     ||||||||    
T  28974260 gttattttg 28974252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 29550779 - 29550875
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatg 97  Q
    ||||||| |||||||||||||||| | |  |  ||||||| ||||||||||||||||  | ||||| |||||||||  |||||||||||||| ||||    
T  29550779 gtaaagtagaatatattgaattgggagttgtgaaagtagtattaattagagttataattgaaaaaaggtaattaatgttgtattgaaaagtgaaatg 29550875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 29815157 - 29815259
Alignment:
Q  9 gaatatattgaattggaaatgatttaagtagtgttaattagagttat--aaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaatta 106  Q
    |||||||||||||||||| || |  ||||| | ||||||||||||||  ||||| |||||| ||| ||||| |||||||||||||| ||||||||  |||    
T  29815157 gaatatattgaattggaagtggtgaaagtaatattaattagagttataaaaaggaaaaaaaataa-taatattgtattgaaaagtgaaatgactccgtta 29815255  T
Q  107 tttt 110  Q
    ||||    
T  29815256 tttt 29815259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 112
Target Start/End: Original strand, 38861328 - 38861395
Alignment:
Q  45 attagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgg 112  Q
    ||||||||||||||  ||||||| ||||||||  |||||||| ||||| ||||||||| |||||||||    
T  38861328 attagagttataaactgaaaaaaataattaatgatgtattgagaagtgaaatgactcatttattttgg 38861395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 43335077 - 43335184
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||  | |||   ||||||| ||||||| ||| ||||  |  ||||||||||||||| |||||||||||||| ||| | |||    
T  43335077 aaagtggaatatattgaattgagagtgaagaaagtagtattaattatagtcataattgataaaaagtaattaatattgtattgaaaagtgaaataaatca 43335176  T
Q  103 attatttt 110  Q
     |||||||    
T  43335177 gttatttt 43335184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 44633200 - 44633109
Alignment:
Q  13 atattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaa-gtaattaatactgtattgaaaagtggaatgactcaa 103  Q
    ||||||||||| || || |  ||||||| ||||||||||||||||  |||||||| |||||||||  |||||||||||||| ||||| ||||    
T  44633200 atattgaattgaaagtggtgaaagtagtattaattagagttataattggaaaaaaagtaattaatgttgtattgaaaagtgaaatgagtcaa 44633109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 49448887 - 49448785
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataa--agggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattat 107  Q
    ||||||||||||||  ||||||  ||||||| ||||||||||||||||  |   |||||||||||||||| | |||||||||||| ||||  ||| ||||    
T  49448887 aatatattgaattgagaatgatgaaagtagtattaattagagttataattaaaaaaaaaagtaattaatattatattgaaaagtgaaatggatcagttat 49448788  T
Q  108 ttt 110  Q
    |||    
T  49448787 ttt 49448785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 105
Target Start/End: Complemental strand, 54217388 - 54217293
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaatt 105  Q
    ||||||||||||||| | || |  |||| || |||||||  |||||||  |||||||||||||||||| ||||||||||| || ||||| ||||||    
T  54217388 aatatattgaattgggagtggtgaaagtggtattaattaatgttataattggaaaaaagtaattaatattgtattgaaaaatgaaatgagtcaatt 54217293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 4357614 - 4357552
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaat 72  Q
    ||||||||||||||| | ||||  || |||| ||||||||||||||||| |||||||||||||    
T  4357614 aatatattgaattgggagtgatgaaaatagtattaattagagttataaatggaaaaaagtaat 4357552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 26185211 - 26185129
Alignment:
Q  34 aagtagtgttaattagagttataaag-ggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    ||||||| |||||||||||||||||| | |||||| ||||||||  |||||||||| ||| |||| |||| ||||||| ||||    
T  26185211 aagtagtattaattagagttataaagagaaaaaaaataattaatgatgtattgaaaggtgaaatggctcacttatttttggac 26185129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 28279856 - 28279790
Alignment:
Q  37 tagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaa 103  Q
    |||| ||||||||||||||||  | |||||||||||||||  |||||||||||||| ||||| ||||    
T  28279856 tagtattaattagagttataattgaaaaaaagtaattaatgttgtattgaaaagtgaaatgagtcaa 28279790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 49401711 - 49401621
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagt 91  Q
    ||||||| |||||||||||||||||||| ||  |||| || ||||||||||| ||||  | | |||||||||||||  || ||||||||||    
T  49401711 gtaaagtagaatatattgaattggaaattatgaaagtggtattaattagagtcataattgaagaaaagtaattaatgttgcattgaaaagt 49401621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 55360400 - 55360505
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagg--gaaaaaagtaattaatactgtattgaaaagtggaatga 98  Q
    |||||||  ||||||||||||||  | ||||  ||||| | ||||||||||||||||  |   |||||||||||||||| |||||||||||||| |||||    
T  55360400 gtaaagtacaatatattgaattgagagtgatgaaagtaatattaattagagttataattgaaaaaaaaagtaattaatattgtattgaaaagtgaaatga 55360499  T
Q  99 ctcaat 104  Q
     |||||    
T  55360500 atcaat 55360505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 22020564 - 22020653
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataa-agggaaaaaagtaattaatactgtattgaaaagt 91  Q
    ||||| |||||||||||||||  |||| |  |||||||  |||||||||||||||  || |||||| ||||||||| |||||||||||||    
T  22020564 aaagtagaatatattgaattgagaatggtgaaagtagtaataattagagttataattggaaaaaaaataattaatattgtattgaaaagt 22020653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 22496762 - 22496819
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagt 91  Q
    ||||||| |||||||||||||||||||| ||||| ||||||||| | |||| ||||||    
T  22496762 aagtagtattaattagagttataaaggggaaaaaataattaatattatattaaaaagt 22496819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 29136843 - 29136931
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagt 91  Q
    ||||||||| |||||||||| | | ||| | || || | ||||||||||||||||  | |||||||||||||||| || ||||||||||    
T  29136843 aaagtggaagatattgaatttggagtgactaaaatattattaattagagttataattgaaaaaaagtaattaatattgcattgaaaagt 29136931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 36047214 - 36047257
Alignment:
Q  62 aaaaaagtaattaatactgtattgaaaagtggaatgactcaatt 105  Q
    |||||||||||||||| |||||||||||||| ||||| ||||||    
T  36047214 aaaaaagtaattaatattgtattgaaaagtgaaatgagtcaatt 36047257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 46958775 - 46958704
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaatta 74  Q
    ||||| |||||||||||||||  | ||||| ||||||| |||||| || ||||||  |||||||||||||||    
T  46958775 aaagtagaatatattgaattgagagtgattaaagtagtattaatttgaattataattggaaaaaagtaatta 46958704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 49218896 - 49218939
Alignment:
Q  62 aaaaaagtaattaatactgtattgaaaagtggaatgactcaatt 105  Q
    |||||||||||||||| |||||||||||||| ||||| ||||||    
T  49218896 aaaaaagtaattaatattgtattgaaaagtgaaatgagtcaatt 49218939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 18509894 - 18509808
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaa 89  Q
    |||||||||||||||||| || || || |  || |||| |||||||||||||| ||   ||||||||||||||||  ||||||||||    
T  18509894 aaagtggaatatattgaagtgtaagtggtgaaaatagtattaattagagttattaaaataaaaaagtaattaatatcgtattgaaaa 18509808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 22129156 - 22129214
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtg 92  Q
    ||||||| ||||||||||||||||     ||||||||||||||| ||||||||||||||    
T  22129156 aagtagtattaattagagttataattaagaaaaagtaattaatattgtattgaaaagtg 22129214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 26799276 - 26799346
Alignment:
Q  9 gaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatact 79  Q
    |||||||||||||||  ||||||  ||||| | |||||||||||||||||   |||| |||||||||||||    
T  26799276 gaatatattgaattgagaatgatgaaagtactattaattagagttataaaataaaaagagtaattaatact 26799346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 5291683 - 5291631
Alignment:
Q  62 aaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    |||||||||||||||| |||||||||||||| ||||  |||||| |||||||||    
T  5291683 aaaaaagtaattaatattgtattgaaaagtgaaatgggtcaatt-ttttgggac 5291631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 9052105 - 9052216
Alignment:
Q  4 aagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaaggg---aaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||| ||||||||||||||   ||||||  ||||||| |||||||| |||||||  ||   ||||||||||||| || |  ||||||||||| ||| | |    
T  9052105 aagtagaatatattgaattcagaatgatgaaagtagtattaattagtgttataattggaaaaaaaaagtaattagtattccattgaaaagtgaaattagt 9052204  T
Q  101 caattattttgg 112  Q
    ||||||||||||    
T  9052205 caattattttgg 9052216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 10099778 - 10099867
Alignment:
Q  2 taaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagt 91  Q
    |||||| |||||||||||||||| | |  |  ||||||| ||||||||||||||||  | |||||||| ||||||  | |||||||||||    
T  10099778 taaagtagaatatattgaattgggagttgtgaaagtagtattaattagagttataattgaaaaaaagttattaatgttatattgaaaagt 10099867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 28330786 - 28330733
Alignment:
Q  62 aaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    |||||||||||||||| |||||||||||||| ||||  |||||| || ||||||    
T  28330786 aaaaaagtaattaatattgtattgaaaagtgaaatgggtcaatttttatgggac 28330733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 37309744 - 37309643
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattt 109  Q
    ||||||||||||||  | ||||  ||||| | ||||||||||||||||||| |||| | || |||||| | ||||||||| || ||| |||||  |||||    
T  37309744 aatatattgaattgagagtgatgaaagtaatattaattagagttataaaggaaaaacaatagttaatattctattgaaaactgaaataactcagatattt 37309645  T
Q  110 tg 111  Q
    ||    
T  37309644 tg 37309643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 42738433 - 42738498
Alignment:
Q  50 agttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    ||||||||  |||||||  ||||||||| |||||||||||||| ||||| |||||| |||| ||||    
T  42738433 agttataattggaaaaagataattaatattgtattgaaaagtgaaatgagtcaatttttttaggac 42738498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 47386149 - 47386101
Alignment:
Q  66 aagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    |||||||||||| |||||||||||||| ||||| |||||| |||||||||    
T  47386149 aagtaattaatattgtattgaaaagtgaaatgaatcaatt-ttttgggac 47386101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 47846952 - 47846863
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaa-agtaattaatactgtattgaaaagt 91  Q
    |||||| ||||||||||||| | | ||||  ||||||| ||||||||||||||||   |||||| | | ||||||| |||||||||||||    
T  47846952 aaagtgaaatatattgaattaggagtgatgaaagtagtattaattagagttataattagaaaaagaattattaatattgtattgaaaagt 47846863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 27977200 - 27977107
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaaggg----aaaaaagtaattaatactgtattgaaaagtg 92  Q
    |||||||||||||||||||||  | ||||  ||||  | ||||||||||||||||  ||    |||||||||||||||  ||||||||||||||    
T  27977200 aaagtggaatatattgaattgagagtgatgaaagtgatattaattagagttataataggaaaaaaaaaagtaattaatgttgtattgaaaagtg 27977107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 38160206 - 38160297
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagg--gaaaaaagtaattaatactgtattgaaaagtg 92  Q
    |||||| ||||||||||||||  | ||||  ||||| | ||||||||||||||||  |   |||||| ||||||||| ||||||||||||||    
T  38160206 aaagtgaaatatattgaattgagagtgataaaagtaatattaattagagttataattgaaaaaaaaaataattaatattgtattgaaaagtg 38160297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 47277734 - 47277822
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaa 89  Q
    |||||||  ||||||||||||||  | ||||| ||||||| ||||||| ||||||||   ||||||  ||||||||| | |||||||||    
T  47277734 gtaaagtaaaatatattgaattgagagtgattaaagtagtattaattatagttataatttgaaaaatataattaataatatattgaaaa 47277822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 7e-37; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 41031627 - 41031517
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||| ||||||||||||||||||||||  ||||||| ||||||| ||||||||| |||||||||||||||||| |||||||||||||| |||||||    
T  41031627 gtaaagtgaaatatattgaattggaaatgatgaaagtagtattaattaaagttataaatggaaaaaagtaattaatattgtattgaaaagtgaaatgact 41031528  T
Q  101 caattattttg 111  Q
    |||||||||||    
T  41031527 caattattttg 41031517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 54493963 - 54493850
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||| |||||||| |||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||| |||| ||    
T  54493963 gtaaagtgaaatatattaaattggaaatgatgaaagtagtattaattagagttataaagggaaaaaagtaattaatattgta-tgaaaagtgaaatggct 54493865  T
Q  101 caattattttgggac 115  Q
    || ||||||||||||    
T  54493864 cagttattttgggac 54493850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 39365071 - 39365183
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||| ||||||  || |||| |||||||||||||||||||| ||||||||||||||| ||||||||||| || |||| ||||    
T  39365071 aaagtggaatatattgaattgggaatgatgaaaatagtattaattagagttataaaggggaaaaagtaattaatattgtattgaaaattgaaatggctca 39365170  T
Q  103 attattttgggac 115  Q
     ||||||||||||    
T  39365171 gttattttgggac 39365183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 21296557 - 21296663
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||| |||||||||||||||||| |  |  ||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||    
T  21296557 aaagtagaatatattgaattggaagttgtgaaagtagtattaattagagttataaaaggaaaaaagtaattaatattgtattgaaaagtgaaatgactca 21296656  T
Q  103 attattt 109  Q
     ||||||    
T  21296657 gttattt 21296663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 33994712 - 33994598
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||||||||||||||| ||  ||||||  |||| || |||||||||||||||||||||||||| || |||||| |||||||||||||| |||||||    
T  33994712 gtaaagtggaatatattgaactgagaatgatgaaagtggtattaattagagttataaagggaaaaaaatatttaatattgtattgaaaagtgaaatgact 33994613  T
Q  101 caattattttgggac 115  Q
    || ||||||| ||||    
T  33994612 cagttatttttggac 33994598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 5245465 - 5245356
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||  | ||||  |||| || ||||||||||||||||||||||||| |||||||||  |||||||||||||| |||| ||||    
T  5245465 aaagtggaatatattgaattgagagtgatgaaagtggtattaattagagttataaagggaaaaatgtaattaatcatgtattgaaaagtgaaatggctca 5245366  T
Q  103 attattttgg 112  Q
     |||||||||    
T  5245365 cttattttgg 5245356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 15280658 - 15280550
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||| | ||||  ||||||| |||||||| |||||||| |||||||||||||||||  |||||||||||||| ||| | |||    
T  15280658 aaagtggaatatattgaattgggagtgatgaaagtagtattaattagggttataaaaggaaaaaagtaattaatgatgtattgaaaagtgaaattattca 15280559  T
Q  103 attattttg 111  Q
     ||||||||    
T  15280558 cttattttg 15280550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 32023155 - 32023267
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||| |||||||||||||||  | ||||  ||||| | |||||||||||||||||||||||||| ||||||||| ||||||| |||||| |||||||||    
T  32023155 aaagttgaatatattgaattgagagtgatgaaagtaatattaattagagttataaagggaaaaaaataattaatattgtattggaaagtgaaatgactca 32023254  T
Q  103 attattttgggac 115  Q
     ||||||| ||||    
T  32023255 gttattttaggac 32023267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 26134757 - 26134864
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||| ||||||||||||||| | ||||  |||||||  |||||||||||||||| ||||||||||| |||||  |||||||||||||| |||||||||    
T  26134757 aaagtgaaatatattgaattgggagtgatgaaagtagtactaattagagttataaaaggaaaaaagtagttaatgatgtattgaaaagtgaaatgactca 26134856  T
Q  103 attatttt 110  Q
     |||||||    
T  26134857 cttatttt 26134864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 1334833 - 1334936
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||| |||||||||||||||| | || |  ||||||| ||||||||||||||||| ||||||||||||||||     |||||||||||| |||||||    
T  1334833 gtaaagtagaatatattgaattgggagtggtgaaagtagtattaattagagttataaa-ggaaaaaagtaattaa-----tattgaaaagtgaaatgact 1334926  T
Q  101 caattatttt 110  Q
    ||||||||||    
T  1334927 caattatttt 1334936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 38600858 - 38600966
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||  ||||||||||| ||| | ||||  ||||||| ||||||||||||||||| ||||| | |||||||||| |||||||||| ||| |||||||    
T  38600858 gtaaagtataatatattgaactgggagtgatgaaagtagtattaattagagttataaatggaaaga-gtaattaatattgtattgaaaggtgaaatgact 38600956  T
Q  101 caattatttt 110  Q
    ||||||||||    
T  38600957 caattatttt 38600966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 49003325 - 49003217
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||| |||||||||||||||||| || ||||  ||  | | ||||| |||||||||||| ||||||||||||||||| |||||||||||||  |||||||    
T  49003325 gtaaggtggaatatattgaattgaaagtgatgaaaagaatattaatgagagttataaagagaaaaaagtaattaatattgtattgaaaagtaaaatgact 49003226  T
Q  101 caattattt 109  Q
    || ||||||    
T  49003225 cacttattt 49003217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 51164965 - 51164898
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattatttt 110  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| ||||||||    
T  51164965 ttaattagagttataaagggaaaaa-gtaattaatattgtattgaaaagtgaaatgactcgattatttt 51164898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 54122278 - 54122389
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||| ||||||||||||||||| |  |  ||||||| || |||||||||||||| |||||||||||||||||  | |||||||||||| ||||||| |    
T  54122278 aaagtgaaatatattgaattggaagttgtgaaagtagtattgattagagttataaaaggaaaaaagtaattaat-ttatattgaaaagtgaaatgactaa 54122376  T
Q  103 attattttgggac 115  Q
     ||||||||||||    
T  54122377 gttattttgggac 54122389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 30261553 - 30261668
Alignment:
Q  1 gtaaagtggaatatattgaatt-ggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgac 99  Q
    |||||||||||||||||||||| || | ||||  ||||||| ||||||||||||||||   | |||||||||||| || |||||||||||||| ||||      
T  30261553 gtaaagtggaatatattgaatttgggagtgatgaaagtagtattaattagagttataattaggaaaaagtaattattattgtattgaaaagtgaaatggg 30261652  T
Q  100 tcaattattttgggac 115  Q
    |||||| |||||||||    
T  30261653 tcaatttttttgggac 30261668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 44234143 - 44234037
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||| |||||||||||||| || ||||  ||||||| ||||||||| |||||||  ||||||| ||||||||| ||||||||||| || ||||||| |    
T  44234143 aaagtgaaatatattgaattgaaattgatgaaagtagtcttaattagaattataaaaagaaaaaaataattaatattgtattgaaaa-tgaaatgactaa 44234045  T
Q  103 attatttt 110  Q
    ||||||||    
T  44234044 attatttt 44234037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 21585470 - 21585576
Alignment:
Q  9 gaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattatt 108  Q
    |||||||||| ||||||| || |  ||||| | ||||||||||||||||  || ||||| ||||||||| ||||||| |||||| ||||||||| |||||    
T  21585470 gaatatattgtattggaagtggtgaaagtaatattaattagagttataattgggaaaaaataattaatattgtattggaaagtgaaatgactcagttatt 21585569  T
Q  109 ttgggac 115  Q
    |||||||    
T  21585570 ttgggac 21585576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 32827356 - 32827425
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagta 70  Q
    |||||||| ||||||||||||| ||||||||  ||||||| |||||||||||||||||||||| ||||||    
T  32827356 gtaaagtgaaatatattgaattagaaatgatgaaagtagtattaattagagttataaagggaacaaagta 32827425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 39866607 - 39866716
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||| |||| |||||||||  | ||||  |||| || |||||||||||||||||||| ||||||||||||||| ||||| | |||||  |||| ||||    
T  39866607 aaagtgaaatacattgaattgtgagtgatgaaagtggtattaattagagttataaaggggaaaaagtaattaatattgtataggaaagtaaaatggctca 39866706  T
Q  103 attattttgg 112  Q
    ||||||||||    
T  39866707 attattttgg 39866716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 44219087 - 44219176
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtg 92  Q
    ||||| |||||||||||||||||| | ||  || |||| ||||||||||||||||  |||||||||||||||||| || |||||||||||    
T  44219087 aaagtagaatatattgaattggaagtaatgaaaatagtattaattagagttataattggaaaaaagtaattaatattgcattgaaaagtg 44219176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 48744239 - 48744166
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    |||||||||||||||||| ||||||||||||||||| |||||| ||||||  ||||||| | ||||||||||||    
T  48744239 ttaattagagttataaagagaaaaaagtaattaatattgtattaaaaagtaaaatgacttagttattttgggac 48744166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 54021510 - 54021618
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||| |||||||||||||| | | || |  ||||||| ||||||||| |||||||||||||||  ||||||||| | |||||||||||| |||||||    
T  54021510 gtaaagtagaatatattgaattcggagtggtgaaagtagtattaattagaattataaagggaaaaat-taattaatattatattgaaaagtgaaatgact 54021608  T
Q  101 caattatttt 110  Q
     |||||||||    
T  54021609 taattatttt 54021618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 46194260 - 46194372
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||| |||||||||||||||  | || |  ||||||| |||||||| |||||||  |||||||||||||||||| |||||||||||||| ||||  |||    
T  46194260 aaagtagaatatattgaattgagagtggtgaaagtagtattaattagtgttataattggaaaaaagtaattaatattgtattgaaaagtgaaatgggtca 46194359  T
Q  103 attattttgggac 115  Q
    ||| || ||||||    
T  46194360 atttttctgggac 46194372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 43640677 - 43640732
Alignment:
Q  61 gaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgggacc 116  Q
    ||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||    
T  43640677 gaaaaaagtaattaatattgtattgaaaagtgaaatgactcagttattttgggacc 43640732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 54845570 - 54845679
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaa--gtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||||||||||||||| ||| | ||  ||||||| |||||||||||||||||  |||||||   ||||||||| |||||| ||||||| |||||||    
T  54845570 aaagtggaatatattgaattagaagtaatgaaagtagtattaattagagttataaatagaaaaaaatataattaatattgtattaaaaagtgaaatgact 54845669  T
Q  101 caattatttt 110  Q
     | |||||||    
T  54845670 tagttatttt 54845679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 24619005 - 24619074
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttg 111  Q
    ||||||||||||||||  |||||||| |||||||||||||||| ||||||| ||||  ||||||||||||    
T  24619005 ttaattagagttataatcggaaaaaaataattaatactgtattaaaaagtgaaatggatcaattattttg 24619074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 37041926 - 37042018
Alignment:
Q  2 taaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagg--gaaaaaagtaattaat-actgtattgaaaagt 91  Q
    ||||||| ||||||||||||||||||||||  ||||||| ||||||||||||||||  |   ||||||||||||||| | |||||||||||||    
T  37041926 taaagtgaaatatattgaattggaaatgatgaaagtagtattaattagagttataattgaaaaaaaaagtaattaataattgtattgaaaagt 37042018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 45392145 - 45392080
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaa 66  Q
    |||||||| ||||||||||||||||||||||  ||||| | ||||||||||||||||| |||||||    
T  45392145 gtaaagtgaaatatattgaattggaaatgatgaaagtaatattaattagagttataaaaggaaaaa 45392080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 26832124 - 26832012
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||| |||||||| |||||| | ||||  ||||||| |||||||||||||||   | |||||||||||||||  ||||||||||| |  |||||||||    
T  26832124 aaagtgaaatatattaaattggtagtgatgaaagtagtattaattagagttatatttgaaaaaaagtaattaatgttgtattgaaaaataaaatgactca 26832025  T
Q  103 attattttgggac 115  Q
     ||||| ||||||    
T  26832024 tttattatgggac 26832012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 39329804 - 39329904
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||| |||||||||||||||  | ||||  ||||||| ||||||||| ||||||  ||||||||||||||| |  |||||||||||||| ||||| |||    
T  39329804 aaagtagaatatattgaattgagagtgatgaaagtagtattaattagaattataattggaaaaaagtaattattgttgtattgaaaagtgaaatgagtca 39329903  T
Q  103 a 103  Q
    |    
T  39329904 a 39329904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 46786035 - 46786143
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||| ||||||||||||||| |  |||  ||||||| |||| || |||||||||| ||||||||||||||||| | |||| ||||||| |||  ||||    
T  46786035 aaagtgaaatatattgaattgggagcgatgaaagtagtattaactaaagttataaagcgaaaaaagtaattaatattatattaaaaagtgaaatagctca 46786134  T
Q  103 attattttg 111  Q
     ||||||||    
T  46786135 gttattttg 46786143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 48409639 - 48409551
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaa 89  Q
    ||||||| |||||| ||||||||| | || |  ||||||| ||||||||||||||||  |||||||||||||||||  |||||||||||    
T  48409639 gtaaagtagaatatgttgaattgggagtggtgaaagtagtattaattagagttataattggaaaaaagtaattaatgttgtattgaaaa 48409551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 9017854 - 9017740
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaa--gtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||| ||||||||||||||||| ||||  ||  | | ||||||  | ||||||||||||||||  |||||||||| |||||||||||||| || ||||    
T  9017854 aaagtgaaatatattgaattggaagtgatgaaaacaatattaattgaaattataaagggaaaaaaaagtaattaatattgtattgaaaagtgaaacgact 9017755  T
Q  101 caattattttgggac 115  Q
    || ||||||| ||||    
T  9017754 cagttattttaggac 9017740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 54458361 - 54458476
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaa-aagtaattaatactgtattgaaaagtggaatgac 99  Q
    |||||||||||||||||||||||  |||||   ||  | | |||||||  ||||||||| ||||| |||||||||||| |||||||||||||  ||| ||    
T  54458361 gtaaagtggaatatattgaattgagaatgaggaaaacaatattaattaaggttataaagagaaaaaaagtaattaatattgtattgaaaagtaaaattac 54458460  T
Q  100 tcaattattttgggac 115  Q
    ||| ||||||||||||    
T  54458461 tcagttattttgggac 54458476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 42547166 - 42547272
Alignment:
Q  9 gaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattatt 108  Q
    |||||||||||||||| | ||||  ||||||| |||||||||| |||||   ||| ||| |||||| |  |||||||||||||| ||||| |||||| ||    
T  42547166 gaatatattgaattgggagtgatgaaagtagtattaattagagctataatttgaataaaataattattgttgtattgaaaagtgaaatgagtcaattttt 42547265  T
Q  109 ttgggac 115  Q
    |||||||    
T  42547266 ttgggac 42547272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 2868627 - 2868515
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||||||||| || ||||||| | ||||  ||||| | |||||||||||| |||   ||||||| ||||||||| |||||||||||||| ||||  |||    
T  2868627 aaagtggaataaatcgaattgggagtgatgaaagtaatattaattagagttgtaattagaaaaaaataattaatattgtattgaaaagtgaaatggatca 2868528  T
Q  103 attattttgggac 115  Q
     ||||||| ||||    
T  2868527 gttattttaggac 2868515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 53051081 - 53050985
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatg 97  Q
    |||||||  ||||||||||||||| | |  |  ||||||| ||||||||||||||||  ||| |||||||||||||| || ||||||||||| ||||    
T  53051081 gtaaagtataatatattgaattgggagttgtgaaagtagtattaattagagttataattggagaaaagtaattaatattgcattgaaaagtgaaatg 53050985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 1923143 - 1923064
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgta 82  Q
    ||||| |||||||||||||||| | || |  ||||||| |||||||| |||||||  |||||||||||||||||| ||||    
T  1923143 aaagtagaatatattgaattgggagtggtgaaagtagtattaattagtgttataattggaaaaaagtaattaatattgta 1923064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 50736153 - 50736054
Alignment:
Q  4 aagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaa 103  Q
    |||| |||||||||||||||||| |  |  ||||||| |||||||||||||||   |||||||||||||||||  | ||||||||| || ||||| ||||    
T  50736153 aagtagaatatattgaattggaagtagtgaaagtagtattaattagagttatagttggaaaaaagtaattaatgttctattgaaaactgaaatgagtcaa 50736054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 50776702 - 50776801
Alignment:
Q  4 aagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaa 103  Q
    |||| |||||||||||||||||| |  |  ||||||| |||||||||||||||   |||||||||||||||||  | ||||||||| || ||||| ||||    
T  50776702 aagtagaatatattgaattggaagtagtgaaagtagtattaattagagttatagttggaaaaaagtaattaatgttctattgaaaactgaaatgagtcaa 50776801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 8706170 - 8706112
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtg 92  Q
    ||||||| ||||||||||||||||   |||||||||||| |||| ||||||||||||||    
T  8706170 aagtagtattaattagagttataattagaaaaaagtaatcaatattgtattgaaaagtg 8706112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 9058057 - 9057999
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtg 92  Q
    ||||||| ||||||||||||||||   |||||||||||| |||| ||||||||||||||    
T  9058057 aagtagtattaattagagttataattagaaaaaagtaatcaatattgtattgaaaagtg 9057999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 26142928 - 26142855
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattat 107  Q
    ||||||| | || |||||||||||  |||||||||||||||||| | |||||||||||  ||||||||| ||||    
T  26142928 aagtagtatcaactagagttataagaggaaaaaagtaattaatattatattgaaaagtaaaatgactcagttat 26142855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 39825871 - 39825790
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagt 91  Q
    ||||||||||||||  ||||||  ||||||| |||||||||  ||| |  |||||||||||||||||  |||||||||||||    
T  39825871 aatatattgaattgagaatgatgaaagtagtattaattagatatattatcggaaaaaagtaattaatgttgtattgaaaagt 39825790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 3862265 - 3862332
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattatttt 110  Q
    ||||||||||||||||  | |||||||||||||| | |||||||||||||| ||||| | |||||||||    
T  3862265 ttaattagagttataattg-aaaaaagtaattaaaattgtattgaaaagtgaaatgagttaattatttt 3862332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 9218198 - 9218130
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaa 71  Q
    ||||| ||||||| |||||||  | ||||  ||||||| ||||||||||||||||| ||||||||||||    
T  9218198 aaagtagaatataatgaattgagagtgatgaaagtagtattaattagagttataaatggaaaaaagtaa 9218130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 3547701 - 3547756
Alignment:
Q  60 ggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    ||||||||||||||||| ||| ||||||||||| ||| | ||||||| ||||||||    
T  3547701 ggaaaaaagtaattaatgctgcattgaaaagtgcaataagtcaattaatttgggac 3547756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 36790986 - 36791029
Alignment:
Q  62 aaaaaagtaattaatactgtattgaaaagtggaatgactcaatt 105  Q
    |||||||||||||||| |||||||||||||| ||||| ||||||    
T  36790986 aaaaaagtaattaatattgtattgaaaagtgaaatgagtcaatt 36791029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 112
Target Start/End: Complemental strand, 7885722 - 7885653
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgg 112  Q
    ||||||||| ||||||  |||||||||||||||||| | |||||||||||| ||||  |||||| ||||||    
T  7885722 ttaattagaattataattggaaaaaagtaattaata-tatattgaaaagtgaaatgggtcaatttttttgg 7885653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 115
Target Start/End: Original strand, 51636985 - 51637055
Alignment:
Q  45 attagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    |||||||||||||  || ||||||||| ||||| || ||||||||||| ||||  ||| ||||||||||||    
T  51636985 attagagttataattgggaaaaagtaaataatattgcattgaaaagtgaaatggatcagttattttgggac 51637055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 52325230 - 52325176
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataa 57  Q
    |||||||||||||||||||||  |||||   ||||||| ||||||||||||||||    
T  52325230 aaagtggaatatattgaattgagaatgacgaaagtagtattaattagagttataa 52325176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 12744867 - 12744754
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaa-agtaattaatactgtattgaaaagtggaatgactc 101  Q
    |||||||| ||||||||||| | | ||||  |||| || ||||| || ||| | ||| |||||| | ||||||||| || ||||||||||| |||| |||    
T  12744867 aaagtggattatattgaattaggagtgatgaaagtggtattaataagcgttgtgaagagaaaaataataattaatattgcattgaaaagtgaaatggctc 12744768  T
Q  102 aattattttgggac 115  Q
    || |||||||||||    
T  12744767 aaatattttgggac 12744754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 36097709 - 36097822
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaa-aaagtaattaatactgtattgaaaagtggaatgactc 101  Q
    |||||||||||||||||||||  | ||||  ||||| | ||||| || ||||||||| || | |||  |||||||| || ||||||||||| |||| |||    
T  36097709 aaagtggaatatattgaattgagagtgatgaaagtaatattaatcagcgttataaagagagagaaaaaaattaatattgcattgaaaagtgaaatggctc 36097808  T
Q  102 aattattttgggac 115  Q
    |  |||||||||||    
T  36097809 agatattttgggac 36097822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 43639570 - 43639626
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaag 59  Q
    |||||| ||||||||||||||||| |  |  ||||||| ||||||||||||||||||    
T  43639570 aaagtgaaatatattgaattggaagttgtgaaagtagtattaattagagttataaag 43639626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 1e-35; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 2846730 - 2846842
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||| |||||||||||||||||  |||||||||||||| |||||||||    
T  2846730 aaagtggaatatattgaattggaattgatgaaagtagtattaattagagttataaaaggaaaaaagtaattaatgatgtattgaaaagtgaaatgactca 2846829  T
Q  103 attattttgggac 115  Q
     ||||||||||||    
T  2846830 cttattttgggac 2846842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 34963863 - 34963977
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||| |||||||| |||||  ||||||  ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34963863 gtaaagtgaaatatatttaattgagaatgatgaaagtaatattaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtgaaatgact 34963962  T
Q  101 caattattttgggac 115  Q
    || ||||||||||||    
T  34963963 cagttattttgggac 34963977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 31581495 - 31581604
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||| ||||||||||||||||| |||||||  ||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||    
T  31581495 gtaaaatggaatatattgaattgaaaatgatgaaagtagtattaattagagttataaatggaaaaaagtaattaatattgtattgaaaagtgaaatgact 31581594  T
Q  101 caattatttt 110  Q
    || |||||||    
T  31581595 cagttatttt 31581604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 30463071 - 30462962
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||| ||||||||||||||||| |||||||  ||||| | ||||||||||||||||| |||||||||| ||||||| ||||| |||||||| |||||||    
T  30463071 gtaaaatggaatatattgaattgaaaatgatgaaagtaatattaattagagttataaaaggaaaaaagtcattaatattgtatggaaaagtgaaatgact 30462972  T
Q  101 caattatttt 110  Q
    ||||||||||    
T  30462971 caattatttt 30462962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 29257600 - 29257488
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||| | ||||  ||||| | |||||||||||||||||||||||||||||||||||  |||||||||||||| |||  ||||    
T  29257600 aaagtggaatatattgaattgggagtgatgaaagtaatattaattagagttataaagggaaaaaagtaattaatgatgtattgaaaagtgaaatagctca 29257501  T
Q  103 attattttgggac 115  Q
     ||||||||||||    
T  29257500 cttattttgggac 29257488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 46288485 - 46288597
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||||||||||||||||||| || | ||  ||||||| |||||||||||||||||||||||||| ||||||||| | |||||||||||| |||| ||||    
T  46288485 aaagtggaatatattgaattgaaagttatgaaagtagtattaattagagttataaagggaaaaaattaattaatattatattgaaaagtgaaatggctca 46288584  T
Q  103 attattttgggac 115  Q
     ||||||||||||    
T  46288585 gttattttgggac 46288597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 5724759 - 5724873
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||| ||||||||||||| |||||||   ||||||| ||||||||||||||||| | |||||||| ||||||| |||||||||||||| |||| ||    
T  5724759 gtaaagtgaaatatattgaattagaaatgaagaaagtagtattaattagagttataaaagaaaaaaagtgattaatattgtattgaaaagtgaaatggct 5724858  T
Q  101 caattattttgggac 115  Q
    || ||||||||||||    
T  5724859 cacttattttgggac 5724873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 7425932 - 7426045
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttata-aagggaaaaaagtaattaatactgtattgaaaagtggaatgactc 101  Q
    |||||||||||||||||||||||| |  |  ||||||| |||| |||||||||| ||||||||||||||||||||| |||||||||||||| |||| |||    
T  7425932 aaagtggaatatattgaattggaagttgtgaaagtagtattaactagagttatataagggaaaaaagtaattaatattgtattgaaaagtgaaatggctc 7426031  T
Q  102 aattattttgggac 115  Q
    | ||||||||||||    
T  7426032 agttattttgggac 7426045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 11616615 - 11616502
Alignment:
Q  3 aaagtggaatata-ttgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactc 101  Q
    ||||||||||||| ||||||||| | || |  |||| || |||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||    
T  11616615 aaagtggaatataattgaattgggagtggtgaaagttgtattaattagagttataaagggaaaaaagtaattaatattgtattgaaaagtgaaatggctc 11616516  T
Q  102 aattattttgggac 115  Q
    | ||||||||||||    
T  11616515 agttattttgggac 11616502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 29434634 - 29434742
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||  ||||||  ||||||| |||||||||||||||||||| ||||| ||||||||| ||||||| |||| | |||||||||    
T  29434634 aaagtggaatatattgaattgtgaatgatgaaagtagtattaattagagttataaaggggaaaaaataattaatattgtattggaaagcgaaatgactca 29434733  T
Q  103 attattttg 111  Q
     ||||||||    
T  29434734 gttattttg 29434742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 40590879 - 40590991
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||| |||||||||||| ||  ||| ||  ||||||| ||||||||||||||||| |||||||||||||||||| |||||| ||||||| |||||||||    
T  40590879 aaagtagaatatattgaaatgagaataataaaagtagtattaattagagttataaaaggaaaaaagtaattaatattgtatttaaaagtgaaatgactca 40590978  T
Q  103 attattttgggac 115  Q
     ||||||||||||    
T  40590979 gttattttgggac 40590991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 39693805 - 39693732
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||| ||||||||||||    
T  39693805 ttaattagagttataaagggaaaaaagtaattaatgatgtattgaaaagtgaaatgactcacttattttgggac 39693732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 47454059 - 47453950
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||| |||||||||| ||| |||||||  |||||||  |||||| |||||||||||||||||| | ||||||| |||||||||||||| |||| ||    
T  47454059 gtaaagtgaaatatattgatttgtaaatgatgaaagtagtaataattatagttataaagggaaaaaaatgattaatattgtattgaaaagtgaaatggct 47453960  T
Q  101 caattatttt 110  Q
    ||||||||||    
T  47453959 caattatttt 47453950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 33584612 - 33584508
Alignment:
Q  7 tggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaatta 106  Q
    |||||||||||||||||| | ||||  ||||||| ||||||| |||||||||||||||||||||||||||  |||||| ||||||| |||| |||| |||    
T  33584612 tggaatatattgaattgggagtgatgaaagtagtattaattatagttataaagggaaaaaagtaattaatgatgtattcaaaagtgaaatggctcagtta 33584513  T
Q  107 ttttg 111  Q
    |||||    
T  33584512 ttttg 33584508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 36117716 - 36117606
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||||||||||||||||||| |||||||  ||||  | ||||||| |||||||||||||||||| ||||||||| |||||||||||||| ||||||     
T  36117716 gtaaagtggaatatattgaattgaaaatgatgaaagtgatattaattaaagttataaagggaaaaaa-taattaatattgtattgaaaagtgaaatgaca 36117618  T
Q  101 caattattttgg 112  Q
    |  |||||||||    
T  36117617 cggttattttgg 36117606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 44604531 - 44604643
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||||||||||||||| |||  | ||||  ||||||| ||||||||||||||||| |||||||  ||||||||  |||||||||||||| |||| ||||    
T  44604531 aaagtggaatatattgagttgagagtgatgaaagtagtattaattagagttataaaaggaaaaacataattaatgatgtattgaaaagtgaaatggctca 44604630  T
Q  103 attattttgggac 115  Q
     ||||||||||||    
T  44604631 cttattttgggac 44604643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 23703971 - 23703861
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaat-actgtattgaaaagtggaatgac 99  Q
    ||||| || |||||||||||||| |||||||  ||||||| ||||||||||||||||| ||||||||||||||||| | ||||||| |||||  |||||     
T  23703971 gtaaaatgaaatatattgaattgaaaatgataaaagtagtattaattagagttataaatggaaaaaagtaattaataattgtattggaaagtaaaatgat 23703872  T
Q  100 tcaattatttt 110  Q
    ||| |||||||    
T  23703871 tcagttatttt 23703861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 38181934 - 38182039
Alignment:
Q  9 gaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattatt 108  Q
    |||||||||||||||||| |  |  ||||||| |||||||||||||||||| |||| || ||||||||| | |||||||||||  ||||||||| |||||    
T  38181934 gaatatattgaattggaagttgtgaaagtagtattaattagagttataaagagaaagaaataattaatattttattgaaaagtaaaatgactcagttatt 38182033  T
Q  109 ttggga 114  Q
    ||||||    
T  38182034 ttggga 38182039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 45890898 - 45890998
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattt 109  Q
    ||||||||||||||||||||||  ||||| | ||||||| |||||||||||||||||| |||||| || |||||||||||||| |||  |||| ||||||    
T  45890898 aatatattgaattggaaatgatgaaagtaatattaattatagttataaagggaaaaaa-taattattattgtattgaaaagtgaaattgctcagttattt 45890996  T
Q  110 tg 111  Q
    ||    
T  45890997 tg 45890998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 48981711 - 48981642
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagta 70  Q
    ||||||||||||||||| |||||||||||||  ||||||||||||||||| ||||||||| |||||||||    
T  48981711 gtaaagtggaatatattaaattggaaatgataaaagtagtgttaattagaattataaaggaaaaaaagta 48981642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 30659533 - 30659628
Alignment:
Q  2 taaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatg 97  Q
    |||||| |||||||||||||| ||| || |  ||||||| ||||||||||||||||  |||||||||||||||||  |||||||||||||| ||||    
T  30659533 taaagtagaatatattgaatttgaagtggtgaaagtagtattaattagagttataattggaaaaaagtaattaatgttgtattgaaaagtgaaatg 30659628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 28333226 - 28333116
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||| |||||||||||||||| | ||||  ||||| | |||||||||||||||   ||||||||||||||| |  |||||||||||||| ||||| |    
T  28333226 gtaaagtagaatatattgaattgggagtgatgaaagtaatattaattagagttatatttggaaaaaagtaattattgttgtattgaaaagtgaaatgaat 28333127  T
Q  101 caattattttg 111  Q
    ||||| |||||    
T  28333126 caatttttttg 28333116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 33774097 - 33774204
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||||||||||| ||||||| || |  |  ||||||| ||||||||| ||||||||| |||||  ||||||||| |||||||||||||| |||||||||    
T  33774097 aaagtggaatatactgaattgtaagttgtgaaagtagtattaattagaattataaaggaaaaaa--taattaatattgtattgaaaagtgaaatgactca 33774194  T
Q  103 attattttgg 112  Q
     |||||||||    
T  33774195 gttattttgg 33774204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 46095533 - 46095611
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgg 112  Q
    ||||||| |||||||||||||||||  ||||||| ||||||||| |||||||||||||| ||||||||  |||||||||    
T  46095533 aagtagtattaattagagttataaaatgaaaaaattaattaatattgtattgaaaagtgaaatgactcggttattttgg 46095611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 37496449 - 37496562
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||| |||||||||||||||  | ||||  ||||||| ||||||| ||||||||  |||||||||||||||||  ||| |||||||||| ||||  |    
T  37496449 gtaaagtagaatatattgaattgagagtgatgaaagtagtattaattaaagttataattggaaaaaagtaattaatgttgtgttgaaaagtgaaatgggt 37496548  T
Q  101 caattattttggga 114  Q
    ||||| ||||||||    
T  37496549 caatttttttggga 37496562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 12308422 - 12308324
Alignment:
Q  12 tatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttg 111  Q
    ||||||||||||||| |  |  ||||| | ||||||||||||||||| | |||||||||||||||| ||||||||||| || ||||||||| ||||||||    
T  12308422 tatattgaattggaagttgtgaaagtaatattaattagagttataaatg-aaaaaagtaattaatattgtattgaaaattgaaatgactcagttattttg 12308324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 32776038 - 32775923
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaata-ctgtattgaaaagtggaatgac 99  Q
    ||||||| |||||||||||||||| | || |  ||||||| ||| ||||||||||||  ||||||||||||||||||  ||||||| |||||| ||||      
T  32776038 gtaaagtagaatatattgaattgggagtggtgaaagtagtattatttagagttataattggaaaaaagtaattaatatttgtattggaaagtgaaatggg 32775939  T
Q  100 tcaattattttgggac 115  Q
    |||||| |||||||||    
T  32775938 tcaatttttttgggac 32775923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 40803689 - 40803792
Alignment:
Q  12 tatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttg 111  Q
    ||||||||||||| ||||||  |||| || |||| |||||||||||| | |||||| ||||||||| |||||| ||||||| || ||||| ||||||||     
T  40803689 tatattgaattgggaatgataaaagtggtattaactagagttataaaagaaaaaaaataattaatattgtattaaaaagtgaaacgactcgattatttta 40803788  T
Q  112 ggac 115  Q
    ||||    
T  40803789 ggac 40803792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 37157225 - 37157112
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||| ||||||||| ||||| |||||||  ||  ||| ||||||||||||||||| | |||||| ||||||||| |||||||||||||| |||  ||    
T  37157225 gtaaagtagaatatattaaattgaaaatgatgaaaaaagtattaattagagttataaaagaaaaaaa-taattaatattgtattgaaaagtgaaatagct 37157127  T
Q  101 caattattttgggac 115  Q
    || ||||||| ||||    
T  37157126 cagttattttaggac 37157112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 37264366 - 37264272
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatg 97  Q
    ||||| |||||||||||||||| | || |  ||||||| ||||||||||||||||   | ||||||||||||||| |||||||||||||| ||||    
T  37264366 aaagtagaatatattgaattgggagtggtgaaagtagtattaattagagttataattaggaaaaagtaattaatattgtattgaaaagtgaaatg 37264272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 49100554 - 49100634
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagg--gaaaaaagtaattaatact 79  Q
    |||||||||||||||||||||||||||||||  || |||  ||||||| |||||||||||   ||||||||||||||||||    
T  49100554 gtaaagtggaatatattgaattggaaatgataaaaatagaattaattaaagttataaaggaaaaaaaaagtaattaatact 49100634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 5083573 - 5083636
Alignment:
Q  48 agagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttg 111  Q
    ||||||||||| |||||||| ||||||||| | |||||||||||| ||||||||| ||||||||    
T  5083573 agagttataaaaggaaaaaaataattaatattatattgaaaagtgaaatgactcacttattttg 5083636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 109
Target Start/End: Original strand, 40038196 - 40038270
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattt 109  Q
    ||||||| ||||||||||||||||| |||||||| ||||||||  | |||||||||||| ||||||||| ||||||    
T  40038196 aagtagtattaattagagttataaa-ggaaaaaaataattaatgatatattgaaaagtgaaatgactcacttattt 40038270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 104
Target Start/End: Complemental strand, 8149973 - 8149911
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaat 104  Q
    ||||||||||||||||  |||||||||||||||||| ||||||||||| || ||||| |||||    
T  8149973 ttaattagagttataattggaaaaaagtaattaatattgtattgaaaaatgaaatgaatcaat 8149911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 38589789 - 38589708
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgta 82  Q
    ||||||| |||||||||||||||| | || |  ||||||| |||||||| |||||||  |||||||||||||||||| ||||    
T  38589789 gtaaagtagaatatattgaattgggagtggtgaaagtagtattaattagtgttataattggaaaaaagtaattaatattgta 38589708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 48981369 - 48981320
Alignment:
Q  66 aagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    |||||||||||| |||||||||||||| ||||||||| ||||||||||||    
T  48981369 aagtaattaatattgtattgaaaagtgaaatgactcagttattttgggac 48981320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 2849310 - 2849214
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatg 97  Q
    ||||||| |||||||||||||||  | || |  ||||||| ||||||||| ||||||  | |||||||||||||||  |||||||||||||| ||||    
T  2849310 gtaaagtagaatatattgaattgagagtggtgaaagtagtattaattagaattataattgaaaaaaagtaattaatgttgtattgaaaagtgaaatg 2849214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 10355789 - 10355877
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagt 91  Q
    ||||| |||||||||||||||  |||| |  ||||| | ||||||||||||||||  | |||||||||||||||| ||||||| |||||    
T  10355789 aaagtagaatatattgaattgagaatggtaaaagtaatattaattagagttataattgaaaaaaagtaattaatattgtattggaaagt 10355877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 23186197 - 23186261
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaa 67  Q
    ||||| |||||||||||||| | | ||||  ||||||||||||||||||||||||||| ||||||    
T  23186197 aaagtagaatatattgaatttggagtgataaaagtagtgttaattagagttataaaggaaaaaaa 23186261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 5068350 - 5068453
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||| ||||||||||||||   | || |  ||||| | ||||||||||||||||  ||||||||||||||| || |||||| ||||||| ||||| |    
T  5068350 gtaaagtagaatatattgaattaagagtggtgaaagtaatattaattagagttataattggaaaaaagtaattagtattgtattaaaaagtgaaatgagt 5068449  T
Q  101 caat 104  Q
    ||||    
T  5068450 caat 5068453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 18235245 - 18235166
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaa-aaaagtaattaatact 79  Q
    ||||||||||||||||  |||||||||||||  || || | |||||||||| ||||||||||| |||| |||||||||||    
T  18235245 gtaaagtggaatatatgaaattggaaatgatgaaaataatattaattagagctataaagggaaaaaaaataattaatact 18235166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 3667929 - 3668043
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||| |||||||||||||||  | ||||  ||||| | ||||||||| |||||   ||||||||||||||| |  |||||||||||||| ||||  |    
T  3667929 gtaaagtagaatatattgaattgagagtgatgaaagtaatattaattagaattatatttggaaaaaagtaattattgttgtattgaaaagtgaaatgggt 3668028  T
Q  101 caattattttgggac 115  Q
    ||||| |||| ||||    
T  3668029 caatttttttaggac 3668043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 7456680 - 7456749
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttg 111  Q
    |||||||||||| |||| |||||||  ||||||||| |||||||||| ||| ||||||| | ||||||||    
T  7456680 ttaattagagttgtaaaaggaaaaatataattaatattgtattgaaatgtgaaatgacttagttattttg 7456749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 14648979 - 14649063
Alignment:
Q  9 gaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaatta--atactgtattgaaaagt 91  Q
    |||||||||||||||  | ||||  ||||| | ||||||||||||||||  |||||||||||||||  ||| |||||||||||||    
T  14648979 gaatatattgaattgagagtgatgaaagtaatattaattagagttataattggaaaaaagtaattaatatattgtattgaaaagt 14649063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 23111615 - 23111672
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagt 91  Q
    ||||||| |||||||| |||||||  |||||||||||||||||| | |||||||||||    
T  23111615 aagtagtattaattagtgttataattggaaaaaagtaattaatattatattgaaaagt 23111672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 39343723 - 39343819
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatg 97  Q
    ||||||| |||||||||||||| | | || |  || |||| ||||||||||||||||  | ||||  |||||||||| |||||||||||||| ||||    
T  39343723 gtaaagtagaatatattgaatttggagtggtgaaaatagtattaattagagttataattgaaaaagggtaattaatattgtattgaaaagtgaaatg 39343819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 39498720 - 39498640
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaag 90  Q
    ||||||||||||||| | ||||  ||||| | ||||||||| ||||||   ||||||||||||||||| || |||||||||    
T  39498720 aatatattgaattgggagtgatgaaagtaatattaattagaattataattagaaaaaagtaattaatattgcattgaaaag 39498640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 40023839 - 40023887
Alignment:
Q  62 aaaaaagtaattaatactgtattgaaaagtggaatgactcaattatttt 110  Q
    |||||||||||||||| |||||||||||||| ||||| |||||| ||||    
T  40023839 aaaaaagtaattaatattgtattgaaaagtgaaatgagtcaattttttt 40023887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 25778790 - 25778743
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataa 57  Q
    ||||||||||||||||| ||||  ||||||| ||||||||||||||||    
T  25778790 aatatattgaattggaagtgatgaaagtagtattaattagagttataa 25778743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 37490672 - 37490739
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagta 70  Q
    |||||||||||||||||||||  | ||||  ||||| | ||||||||| |||||||||||||| ||||    
T  37490672 aaagtggaatatattgaattgatagtgataaaagtaatattaattagaattataaagggaaaatagta 37490739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 18731494 - 18731413
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattg 85  Q
    ||||||| |||||||||||||||||| || |  |||||   ||||||||||||||||  ||||||||| |||||||  |||||||    
T  18731494 gtaaagtagaatatattgaattggaagtggtgaaagta---ttaattagagttataattggaaaaaagcaattaatgttgtattg 18731413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 34064270 - 34064156
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||| |||||||||||||||  | ||||  ||||| | ||||||||||||||||  | |||||||||| || |  |||||| ||||||  ||||| |    
T  34064270 gtaaagtagaatatattgaattgagagtgatgaaagtaatattaattagagttataattgtaaaaaagtaactattgttgtattaaaaagtaaaatgagt 34064171  T
Q  101 caattattttgggac 115  Q
    ||||| ||| |||||    
T  34064170 caattttttcgggac 34064156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 100
Target Start/End: Original strand, 21387716 - 21387757
Alignment:
Q  59 gggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||||||||||||||| | |||||||||||| |||||||    
T  21387716 gggaaaaaagtaattaatattatattgaaaagtgaaatgact 21387757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 27621828 - 27621779
Alignment:
Q  62 aaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttg 111  Q
    |||||||||||| ||| |||||||||||||| ||||| |||||| |||||    
T  27621828 aaaaaagtaattgatattgtattgaaaagtgaaatgaatcaatttttttg 27621779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 27242823 - 27242891
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattatttt 110  Q
    ||||||||||||||||   |||||| ||||||||||||  ||||||||||| ||| | ||| |||||||    
T  27242823 ttaattagagttataattagaaaaaggtaattaatactacattgaaaagtgaaataagtcagttatttt 27242891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 27337925 - 27338020
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatg 97  Q
    |||||||  ||||||||||||||| | || |  ||||| | ||||||| ||||||||  |||||||| ||||||||  |||||||||||||| ||||    
T  27337925 gtaaagtataatatattgaattgggagtggtaaaagtaatattaattaaagttataattggaaaaaa-taattaatgttgtattgaaaagtgaaatg 27338020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 15081478 - 15081364
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||||||||||||||||||||||| ||  ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||   |    
T  15081478 gtaaagtggaatatattgaattggaaattatgaaagtagtattaattagagttataaagggaaaaaagtaattaatattgtattgaaaagtgaaattgtt 15081379  T
Q  101 caattattttgggac 115  Q
    || ||||||||||||    
T  15081378 cagttattttgggac 15081364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 30064003 - 30064115
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||| | ||||  ||||| | |||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||    
T  30064003 aaagtggaatatattgaattgggagtgatgaaagtaatattaattagagttataaagggaaaaaagtaattaatattgtattggaaagtgaaatgactca 30064102  T
Q  103 attattttgggac 115  Q
     ||||||| ||||    
T  30064103 gttattttaggac 30064115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 7301132 - 7301239
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||||||||||||||||||| |||||||  ||||| | ||| |||||||||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  7301132 gtaaagtggaatatattgaattgaaaatgatgaaagtaatattagttagagttataaagggaaaaaaataattaatattgtattgaaaagtgaaatgact 7301231  T
Q  101 caattatt 108  Q
    | ||||||    
T  7301232 ctattatt 7301239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 3604654 - 3604766
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||||| |  |  ||||| | |||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||    
T  3604654 aaagtggaatatattgaattggaagttgtgaaagtaatattaattagagttataaagggaaaaaaataattaatattgtattgaaaagtgaaatgactca 3604753  T
Q  103 attattttgggac 115  Q
     ||||||| ||||    
T  3604754 gttattttaggac 3604766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 31265834 - 31265725
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||||||||||||||||||||| |  |  ||||| | ||||||||||||||||||| |||||| ||||||||| |||||||||||||| |||||||    
T  31265834 gtaaagtggaatatattgaattggaagttgtgaaagtaatattaattagagttataaaggaaaaaaa-taattaatattgtattgaaaagtgaaatgact 31265736  T
Q  101 caattattttg 111  Q
     | ||||||||    
T  31265735 aagttattttg 31265725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 33109428 - 33109317
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||| || ||||||||||||||  ||||||  ||||||| ||||||||||||||||| |||||||| |||||| || |||||||||||||  |||| ||    
T  33109428 gtaaaatgaaatatattgaattgagaatgatgaaagtagtattaattagagttataaatggaaaaaaataattagtattgtattgaaaagtaaaatggct 33109329  T
Q  101 caattattttgg 112  Q
    || || ||||||    
T  33109328 cagttgttttgg 33109317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 9755207 - 9755294
Alignment:
Q  9 gaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatg 97  Q
    ||||||||||||||| |||||||  || || | ||||||| ||||||||||| |||||||||||||||| |||||||||||||| ||||    
T  9755207 gaatatattgaattgaaaatgatgaaaataatattaattacagttataaagg-aaaaaagtaattaatattgtattgaaaagtgaaatg 9755294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 2657956 - 2657866
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagt 91  Q
    |||||||| ||||||||||||||||| ||||  ||||| | ||||||||| |||||   |||||||||||||||||  |||||||||||||    
T  2657956 gtaaagtgaaatatattgaattggaagtgatgaaagtaatattaattagaattatatttggaaaaaagtaattaattttgtattgaaaagt 2657866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 33921521 - 33921635
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||| |||||||||||||||| | |  |  ||||||| ||||||||||||||||  |||||||||||||||||| ||| ||| |||||| ||||  |    
T  33921521 gtaaagtagaatatattgaattgggagttgtaaaagtagtattaattagagttataattggaaaaaagtaattaatattgttttggaaagtgaaatgggt 33921620  T
Q  101 caattattttgggac 115  Q
    ||||| || ||||||    
T  33921621 caatttttctgggac 33921635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 4238444 - 4238363
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    ||||||| ||||||| |||||||||| ||||||| ||||||||| ||||||||||  |  ||||||||||||||||| ||||    
T  4238444 aagtagtattaattaaagttataaagagaaaaaaataattaatattgtattgaaagataaaatgactcaattattttaggac 4238363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 26356322 - 26356232
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtgga 94  Q
    |||||| ||||||||||||| ||| ||||  ||||||| ||||||| |||||||| | | ||||||||||||||| || |||||||||||||    
T  26356322 aaagtgaaatatattgaattagaagtgatgaaagtagtattaattaaagttataatgag-aaaaagtaattaatattgcattgaaaagtgga 26356232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 2310349 - 2310431
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtg 92  Q
    ||||||||||||||| | ||||  ||||||| |||||||  |||||||  | |||||||||||||||| ||||||||||||||    
T  2310349 aatatattgaattgggagtgatgaaagtagtattaattaatgttataattgaaaaaaagtaattaatattgtattgaaaagtg 2310431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 34915903 - 34915964
Alignment:
Q  50 agttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttg 111  Q
    ||||||||||||||||||  |||||||| | |||||||||||| ||||||||| ||||||||    
T  34915903 agttataaagggaaaaaaaaaattaatattttattgaaaagtgaaatgactcagttattttg 34915964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3166160 - 3166248
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaa 89  Q
    ||||||| |||||||||||||  | | || |  ||||||| ||||||||||||||||  |||||||||||||||||  |||||||||||    
T  3166160 gtaaagtagaatatattgaatgaggattggtgaaagtagtattaattagagttataattggaaaaaagtaattaatgttgtattgaaaa 3166248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 6787342 - 6787253
Alignment:
Q  9 gaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatga 98  Q
    ||||||||| ||||| || ||||  ||||||| |||||||||||||||    ||||||| ||||||||| || ||||||||||| |||||    
T  6787342 gaatatatttaattgaaagtgatgaaagtagttttaattagagttatatttagaaaaaaataattaatattgcattgaaaagtgaaatga 6787253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 15321279 - 15321380
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||| |||||||||||||||  |||| |  ||||||| |||||||| |||||||   |||||||||||||||||   |||||||| ||| ||||| |||    
T  15321279 aaagtagaatatattgaattgagaatgttgaaagtagtattaattagtgttataattagaaaaaagtaattaatataatattgaaacgtgaaatgaatca 15321378  T
Q  103 at 104  Q
    ||    
T  15321379 at 15321380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 15371917 - 15372006
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtg 92  Q
    ||||| |||||||||||||||| | || |  ||||||| |||||||| |||||||  ||||||||||||| ||||   ||||||||||||    
T  15371917 aaagtagaatatattgaattgggagtggtgaaagtagtattaattagtgttataattggaaaaaagtaataaatataatattgaaaagtg 15372006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 4552896 - 4552853
Alignment:
Q  62 aaaaaagtaattaatactgtattgaaaagtggaatgactcaatt 105  Q
    |||||||||||||||| |||||||||||||| ||||| ||||||    
T  4552896 aaaaaagtaattaatattgtattgaaaagtgaaatgagtcaatt 4552853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 8232403 - 8232458
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatg 97  Q
    ||||||||| ||||||  |||||||||||||||||  |||||||||||||| ||||    
T  8232403 ttaattagaattataattggaaaaaagtaattaatgttgtattgaaaagtgaaatg 8232458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 33017996 - 33018071
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaat 76  Q
    ||||||| |||||||||||||||| | || |  ||||||| ||||||||||||||||  ||||||||  |||||||    
T  33017996 gtaaagtagaatatattgaattgggagtggtgaaagtagtattaattagagttataattggaaaaaaaaaattaat 33018071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 34703616 - 34703561
Alignment:
Q  60 ggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    |||||||||| |||||||||||||||||||||| ||||| |||  |||||| ||||    
T  34703616 ggaaaaaagtgattaatactgtattgaaaagtgaaatgagtcagatattttaggac 34703561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 31723548 - 31723458
Alignment:
Q  2 taaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtg 92  Q
    |||| |||||||||||||||||  ||| ||  || || | ||||||| | ||||||  | |||||||||||||||| ||||||||||||||    
T  31723548 taaattggaatatattgaattgagaataatgaaaataatattaattataattataattgaaaaaaagtaattaatattgtattgaaaagtg 31723458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 34803792 - 34803850
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtg 92  Q
    ||||||| ||||||| ||||||||  | |||||||||||| ||| ||||||||||||||    
T  34803792 aagtagtattaattatagttataattgaaaaaaagtaattgatattgtattgaaaagtg 34803850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 3e-33; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 11099532 - 11099644
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||| | ||||  ||||||| |||||||||||||||||||| ||||||||||||||| ||||||| |||||| |||||||||    
T  11099532 aaagtggaatatattgaattgggagtgatgaaagtagtattaattagagttataaaggggaaaaagtaattaatattgtattggaaagtgaaatgactca 11099631  T
Q  103 attattttgggac 115  Q
     ||||||||||||    
T  11099632 gttattttgggac 11099644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 7 - 110
Target Start/End: Complemental strand, 4412432 - 4412329
Alignment:
Q  7 tggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaatta 106  Q
    |||||||||||||||| ||||||||  || |||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| | |||    
T  4412432 tggaatatattgaattagaaatgatgaaaatagtattaattagagttataaagggaaaaaagtaattaatattgtattgaaaagtgaaatgacttagtta 4412333  T
Q  107 tttt 110  Q
    ||||    
T  4412332 tttt 4412329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 35334581 - 35334693
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||| | ||||  ||||||| ||||||||||||||||| |||||||| ||||||||  |||||||||||||| |||| ||||    
T  35334581 aaagtggaatatattgaattgggagtgatgaaagtagtattaattagagttataaaaggaaaaaaataattaatgatgtattgaaaagtgaaatggctca 35334680  T
Q  103 attattttgggac 115  Q
     ||||||||||||    
T  35334681 cttattttgggac 35334693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 42575693 - 42575805
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||||| |  |  ||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||| |||| |||     
T  42575693 aaagtggaatatattgaattggaagttgtgaaagtagtattaattaaagttataaagggaaaaaagtaattaatattgtattgaaaagtgaaatggctcg 42575792  T
Q  103 attattttgggac 115  Q
     ||||||||||||    
T  42575793 gttattttgggac 42575805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 20189947 - 20189846
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||||||||||||||||||  ||||||  ||||| | |||||||||||||||||||||||||| ||||||||| |||||| ||||||| |||||||    
T  20189947 gtaaagtggaatatattgaattgagaatgatgaaagtaatattaattagagttataaagggaaaaaaataattaatattgtattaaaaagtgaaatgact 20189848  T
Q  101 ca 102  Q
    ||    
T  20189847 ca 20189846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 25814419 - 25814310
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||| ||||||||||||||||||||||   |||| | ||||||| ||||||||| |||||||||||||||||| |||||||||||||| ||||| |    
T  25814419 gtaaagtgaaatatattgaattggaaatgatgagagtaatattaattaaagttataaaaggaaaaaagtaattaatattgtattgaaaagtgaaatgatt 25814320  T
Q  101 caattatttt 110  Q
    || |||||||    
T  25814319 cagttatttt 25814310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 39008183 - 39008070
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||| ||||||||||||||||| |  |  ||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  39008183 gtaaagtgaaatatattgaattggaagtt-tgaaagtagtattaattagagttataaagggaaaaaaataattaatattgtattgaaaagtgaaatgact 39008085  T
Q  101 caattattttgggac 115  Q
     | ||||||| ||||    
T  39008084 tagttattttaggac 39008070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 7613762 - 7613666
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatg 97  Q
    |||||||| ||||||||||||||||||||||  ||||| | ||||||| ||||||||||| |||||||||||||||| |||||| ||||||| ||||    
T  7613762 gtaaagtgaaatatattgaattggaaatgataaaagtaatattaattatagttataaaggaaaaaaagtaattaatattgtattaaaaagtgaaatg 7613666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 35646144 - 35646248
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||| ||| |  |  ||||||| ||||||||||||||||| ||||||||||||||||||  ||||||||||||| |||||||||    
T  35646144 aaagtggaatatattgaattagaagttgtgaaagtagtattaattagagttataaaaggaaaaaagtaattaatatcgtattgaaaagtgaaatgactca 35646243  T
Q  103 attat 107  Q
     ||||    
T  35646244 gttat 35646248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 13135806 - 13135699
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||| | | ||||  |||||||  |||||| |||||||||||||||||| || |||||| |||||||||||||| ||||||||     
T  13135806 aaagtggaatatattgaattaggagtgatgaaagtagtagtaattaaagttataaagggaaaaaaatatttaatattgtattgaaaagtgaaatgactcg 13135707  T
Q  103 attatttt 110  Q
    ||||||||    
T  13135706 attatttt 13135699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 5357870 - 5357984
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||| |||||||||| ||||||| || |  ||||| | ||||||||||||||||   ||||||||||||||||||||||||| |||||| ||||||     
T  5357870 gtaaagtagaatatattgtattggaagtggtgaaagtaatattaattagagttataatttgaaaaaagtaattaatactgtattggaaagtgaaatgaca 5357969  T
Q  101 caattattttgggac 115  Q
    || ||||||||||||    
T  5357970 cagttattttgggac 5357984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 17243009 - 17243115
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||  | ||||  ||||||| |||||||||||||||||||| ||||||||||||||  |||||| ||||||| ||| |||||    
T  17243009 aaagtggaatatattgaattgagagtgatgaaagtagtattaattagagttataaaggg-aaaaagtaattaatgatgtattaaaaagtgaaataactca 17243107  T
Q  103 attatttt 110  Q
     |||||||    
T  17243108 cttatttt 17243115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 33012407 - 33012296
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||| ||||||| | ||||  ||||||| |||| ||| ||||||||| ||||||||||||||||| || ||||||||||| |||| ||||    
T  33012407 aaagtggaatatatagaattgggagtgatgaaagtagtattaactagcgttataaagagaaaaaagtaattaatattgcattgaaaagtgaaatggctca 33012308  T
Q  103 attattttggga 114  Q
      ||||||||||    
T  33012307 gatattttggga 33012296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 33988255 - 33988140
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaat-gac 99  Q
    |||||||||||||||||||||||| | | ||  ||||| | | ||||||||||||||||||||| |||||||||||  |||||||||||||| |||  ||    
T  33988255 gtaaagtggaatatattgaattgggagtaatgaaagtaatatgaattagagttataaagggaaacaagtaattaatgatgtattgaaaagtgaaataaac 33988156  T
Q  100 tcaattattttgggac 115  Q
    ||| ||||||||||||    
T  33988155 tcacttattttgggac 33988140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 3725237 - 3725128
Alignment:
Q  5 agtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaat 104  Q
    |||||||||||| ||||||  | ||||  ||||| | ||||||||||||||||||||||||||  |||||||| |||||||||||||| ||||||||| |    
T  3725237 agtggaatatatcgaattgtgagtgatgaaagtaatattaattagagttataaagggaaaaaa-aaattaatattgtattgaaaagtgaaatgactcagt 3725139  T
Q  105 tattttgggac 115  Q
    |||||| ||||    
T  3725138 tattttaggac 3725128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 6610892 - 6610776
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaa--gtaattaatactgtattgaaaagtggaatga 98  Q
    |||||||| ||||||||||||| | | ||||  ||||| | ||||||| |||||||||| |||||||  |||||||||| |||||| ||||||| |||||    
T  6610892 gtaaagtgaaatatattgaattcggagtgatgaaagtaatattaattaaagttataaagagaaaaaaaagtaattaatattgtatttaaaagtgaaatga 6610793  T
Q  99 ctcaattattttgggac 115  Q
    |||| ||||||||||||    
T  6610792 ctcagttattttgggac 6610776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 13717024 - 13716955
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttg 111  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |  ||||||||| ||||||||    
T  13717024 ttaattagagttataaagggaaaaaagtaattaatattgtattgaaaaataaaatgactcagttattttg 13716955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 858357 - 858281
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattatttt 110  Q
    ||||||| ||||||||||||||||||| |||||||||||||||| |||||||||| ||| ||||||||  |||||||    
T  858357 aagtagtattaattagagttataaaggtaaaaaagtaattaatattgtattgaaatgtgaaatgactcggttatttt 858281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 111
Target Start/End: Complemental strand, 15814703 - 15814608
Alignment:
Q  13 atattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttg 111  Q
    |||||||||||||  ||||  ||||||| ||||||||||||||||||  |||||| ||||||||| |||||||||||||| ||||||||| ||||||||    
T  15814703 atattgaattggag-tgatgaaagtagtattaattagagttataaag--aaaaaaataattaatattgtattgaaaagtgaaatgactcagttattttg 15814608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 4044530 - 4044643
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||| ||||||||||||||||   || |  || || | ||||||| | ||||||||| |||||||||||||||| |||||||||||||| ||||| |    
T  4044530 gtaaagtagaatatattgaattgggtgtggtgaaaatattattaattaaatttataaagg-aaaaaagtaattaatattgtattgaaaagtgaaatgatt 4044628  T
Q  101 caattattttgggac 115  Q
    |||||||||||||||    
T  4044629 caattattttgggac 4044643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 8692912 - 8692982
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgg 112  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||| || ||||||||  |||||||||    
T  8692912 ttaattagagttataaaggaaaaaaagtaattaatattgtattgaaaaatgaaatgactcggttattttgg 8692982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 41184171 - 41184061
Alignment:
Q  2 taaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactc 101  Q
    |||||||||||| ||| |||||  ||||||  ||||| | ||||||||||||||||| | ||||| |||||||||| |||||||||||||  ||| ||||    
T  41184171 taaagtggaataaattaaattgagaatgatgaaagtaatattaattagagttataaatgaaaaaatgtaattaatattgtattgaaaagtaaaatcactc 41184072  T
Q  102 aattattttgg 112  Q
    | |||||||||    
T  41184071 agttattttgg 41184061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 8369751 - 8369864
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaag-taattaatactgtattgaaaagtggaatgactc 101  Q
    ||||||||||||||||||||| || |  |  ||||||| ||||||||||||||||| | ||||||  ||||||||| ||||||||||| || |||| |||    
T  8369751 aaagtggaatatattgaattgaaagttgtgaaagtagtattaattagagttataaaagaaaaaaaaataattaatattgtattgaaaaatgaaatggctc 8369850  T
Q  102 aattattttgggac 115  Q
    | ||||||||||||    
T  8369851 agttattttgggac 8369864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 22582927 - 22583032
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||||||| |||||||||||||| |  |  ||||||| ||||||||||||||||||  |||||| ||||||||| ||||||||||| || ||| |||||    
T  22582927 aaagtggaa-atattgaattggaagttgtgaaagtagtattaattagagttataaagaaaaaaaaataattaatattgtattgaaaattgaaataactca 22583025  T
Q  103 attattt 109  Q
     ||||||    
T  22583026 gttattt 22583032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 42211386 - 42211276
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaa-aaagtaattaatactgtattgaaaagtggaatgactc 101  Q
    |||||| ||||||||||||||  | ||||  ||||||| |||||| |||||||||||| ||| ||||||| ||| | |||||| ||||||| ||||||||    
T  42211386 aaagtgaaatatattgaattgtgagtgatgaaagtagtattaatttgagttataaaggaaaacaaagtaaataagattgtattcaaaagtgaaatgactc 42211287  T
Q  102 aattattttgg 112  Q
    | |||||||||    
T  42211286 agttattttgg 42211276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 72160 - 72272
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||| ||||||||| |||| | | ||||  ||||||| ||||||||| ||||||  || |||||||||||| || |||||||||||||| ||||  |||    
T  72160 aaagtagaatatattaaattaggagtgatgaaagtagtattaattagatttataattgggaaaaagtaattattattgtattgaaaagtgaaatgggtca 72259  T
Q  103 attattttgggac 115  Q
    ||| |||||||||    
T  72260 atttttttgggac 72272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 115
Target Start/End: Complemental strand, 7276391 - 7276324
Alignment:
Q  48 agagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  ||| ||||| ||||||| ||||    
T  7276391 agagttataaagtgaaaaaagtaattaatattgtattgaaaagtaaaataactcagttattttaggac 7276324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 39212606 - 39212724
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaaggga------aaaaagtaattaatactgtattgaaaagtggaat 96  Q
    ||||| |||||||||||||||| |  |||  ||||||| ||||||||||||||||  | |      ||||||||||||||| || |||||||||||||||    
T  39212606 aaagtagaatatattgaattgggagcgatgaaagtagtattaattagagttataattgaagaaaaaaaaaagtaattaatattgcattgaaaagtggaat 39212705  T
Q  97 gactcaattattttgggac 115  Q
    |  ||||||||||||||||    
T  39212706 gggtcaattattttgggac 39212724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 34534968 - 34534865
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattt 109  Q
    ||||||||||||||  ||||||  ||||| | ||||||||||||||||  | |||||  ||||||||| |||||||||||||| | ||| |||||| |||    
T  34534968 aatatattgaattgagaatgataaaagtaatattaattagagttataattgaaaaaa--taattaatattgtattgaaaagtgaactgaatcaatttttt 34534871  T
Q  110 tgggac 115  Q
    ||||||    
T  34534870 tgggac 34534865  T

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Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 39183682 - 39183767
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaa 89  Q
    |||||||||||||||||||||  | ||||  ||||| | |||||||||||||| ||  ||||||||||||||||| |||||||||||    
T  39183682 aaagtggaatatattgaattgagagtgatgaaagtaatattaattagagttat-aattgaaaaaagtaattaatattgtattgaaaa 39183767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 4194684 - 4194599
Alignment:
Q  12 tatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatg 97  Q
    ||||||||||||| | || |  ||||||| |||||||| |||||||  | |||||||||||||||| |||||||||||||| ||||    
T  4194684 tatattgaattgggagtggtgaaagtagtattaattagtgttataattgaaaaaaagtaattaatattgtattgaaaagtgaaatg 4194599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 4475299 - 4475186
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagt-tataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactc 101  Q
    ||||||||| || ||||||||||||||||  ||||||| ||||||| ||| |||||  ||||| | |||||||||| || ||||||||||| | ||  ||    
T  4475299 aaagtggaaaatgttgaattggaaatgataaaagtagtattaattatagtgtataattggaaatatgtaattaatattgcattgaaaagtgaattgggtc 4475200  T
Q  102 aattattttgggac 115  Q
    | ||||||||||||    
T  4475199 agttattttgggac 4475186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 9426667 - 9426720
Alignment:
Q  62 aaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    |||||||||||||||| |||||||||||||| ||||| ||||||||||| ||||    
T  9426667 aaaaaagtaattaatattgtattgaaaagtgaaatgagtcaattattttaggac 9426720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 13598023 - 13597970
Alignment:
Q  62 aaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    |||||||||||||||| |||||||||||||| ||||| ||||||||||| ||||    
T  13598023 aaaaaagtaattaatattgtattgaaaagtgaaatgagtcaattattttaggac 13597970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 14259681 - 14259612
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttg 111  Q
    ||||||||| ||||||| |||||||||||||||||| | ||||||||| || ||||| ||| ||||||||    
T  14259681 ttaattagaattataaaaggaaaaaagtaattaatattatattgaaaaatgaaatgaatcagttattttg 14259612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 20369269 - 20369216
Alignment:
Q  62 aaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    |||||||||||||||| |||||||||||||| ||||| |||||| |||||||||    
T  20369269 aaaaaagtaattaatattgtattgaaaagtgaaatgagtcaatttttttgggac 20369216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Original strand, 30437835 - 30437904
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttg 111  Q
    ||||||||||||||||    |||||||||||||||| |||||| ||||||| ||||||||| || |||||    
T  30437835 ttaattagagttataattaaaaaaaagtaattaatattgtatttaaaagtgaaatgactcagttgttttg 30437904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 39035941 - 39036021
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    ||||||| |||||||| |||||||   |||||| |||||||||| |||||||||||||| ||||| | |||| |||||||||    
T  39035941 aagtagttttaattagtgttataagtagaaaaaggtaattaatattgtattgaaaagtgaaatgaattaatt-ttttgggac 39036021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 31090326 - 31090262
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatga 98  Q
    ||||||| |||||||| ||||| |  | |||||||||||||||| |||||||||||||| |||||    
T  31090326 aagtagtattaattagtgttatgattgaaaaaaagtaattaatattgtattgaaaagtgaaatga 31090262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 13016478 - 13016521
Alignment:
Q  62 aaaaaagtaattaatactgtattgaaaagtggaatgactcaatt 105  Q
    |||||||||||||||| |||||||||||||| ||||| ||||||    
T  13016478 aaaaaagtaattaatattgtattgaaaagtgaaatgagtcaatt 13016521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 13087856 - 13087899
Alignment:
Q  62 aaaaaagtaattaatactgtattgaaaagtggaatgactcaatt 105  Q
    |||||||||||||||| |||||||||||||| ||||| ||||||    
T  13087856 aaaaaagtaattaatattgtattgaaaagtgaaatgagtcaatt 13087899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 105
Target Start/End: Complemental strand, 24534616 - 24534553
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaatt 105  Q
    |||||||| |||||||  | |||||||||||||||| |||||||||||||| ||| | ||||||    
T  24534616 ttaattagtgttataattgaaaaaaagtaattaatattgtattgaaaagtgaaattaatcaatt 24534553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 36469156 - 36469260
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataa----agggaaaaaagtaattaatactgtattgaaaagtggaatgactcaatt 105  Q
    |||||||||||||  || ||||  ||||||| ||||||||| ||||||    | | |||||| ||||||||| ||||||||||| || ||||| ||||||    
T  36469156 aatatattgaattaaaagtgatgaaagtagtattaattagaattataattagaagaaaaaaaataattaatattgtattgaaaaatgaaatgaatcaatt 36469255  T
Q  106 atttt 110  Q
    |||||    
T  36469256 atttt 36469260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 42818923 - 42818868
Alignment:
Q  37 tagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtg 92  Q
    |||| ||||||||||||||||  | |||||||||||||||| | ||||||||||||    
T  42818923 tagtattaattagagttataattgaaaaaaagtaattaatattatattgaaaagtg 42818868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 7179535 - 7179617
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattg 85  Q
    ||||| |||||||||||||||  ||||||   |||||  ||||||||||||||||   ||||||| ||||||||| |||||||    
T  7179535 aaagtagaatatattgaattgagaatgatgagagtagcattaattagagttataactagaaaaaaataattaatattgtattg 7179617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 15898244 - 15898143
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||| |||||||||||||||  | || |  ||||| | |||||||| |||||||  | |||||||||||||||| |||||||||||||| ||| | |||    
T  15898244 aaagtagaatatattgaattgagagtggtgaaagtaatattaattagtgttataattg-aaaaaagtaattaatattgtattgaaaagtgaaataagtca 15898146  T
Q  103 att 105  Q
    |||    
T  15898145 att 15898143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 103
Target Start/End: Original strand, 6629487 - 6629548
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaa 103  Q
    ||||||||||||||||   |||||||||||||| |  |||||||||||||| ||||| ||||    
T  6629487 ttaattagagttataattagaaaaaagtaattattgttgtattgaaaagtgaaatgagtcaa 6629548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 14184142 - 14184199
Alignment:
Q  42 ttaattagagttataaagggaaaa-aagtaattaatactgtattgaaaagtggaatga 98  Q
    ||||||| ||||||||  |||||| |||||||||||| |||||||||||||| |||||    
T  14184142 ttaattatagttataattggaaaaaaagtaattaatattgtattgaaaagtgaaatga 14184199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 25111201 - 25111270
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagta 70  Q
    ||||||| |||||||||||||||||| || |  ||||||| ||||||| | ||||||  |||||||||||    
T  25111201 gtaaagtagaatatattgaattggaagtggtgaaagtagtattaattaaaattataattggaaaaaagta 25111270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 25170292 - 25170361
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagta 70  Q
    ||||||| |||||||||||||||||| || |  ||||||| ||||||| | ||||||  |||||||||||    
T  25170292 gtaaagtagaatatattgaattggaagtggtgaaagtagtattaattaaaattataattggaaaaaagta 25170361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 38978744 - 38978696
Alignment:
Q  67 agtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    ||||||| ||| |||||||||||||| ||||  ||||||||||||||||    
T  38978744 agtaattgatattgtattgaaaagtgaaatggatcaattattttgggac 38978696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 115
Target Start/End: Original strand, 41686622 - 41686658
Alignment:
Q  79 tgtattgaaaagtggaatgactcaattattttgggac 115  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  41686622 tgtattgaaaagtgaaatgactcagttattttgggac 41686658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 4e-32; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 33190965 - 33191075
Alignment:
Q  5 agtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaat 104  Q
    |||||||||||||||||||||| |  |  |||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |    
T  33190965 agtggaatatattgaattggaagttgtgaaagtagtactaattagagttataaagggaaaaaagtaattaatattgtattgaaaagtgaaatgactcagt 33191064  T
Q  105 tattttgggac 115  Q
    |||||||||||    
T  33191065 tattttgggac 33191075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 38252490 - 38252604
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||||||||||||||||||||||||||  ||||||| || ||||||||||||||||||||||||||||||||| |||||  ||||||| ||||  |    
T  38252490 gtaaagtggaatatattgaattggaaatgatgaaagtagtattgattagagttataaagggaaaaaagtaattaatattgtatcaaaaagtgaaatggtt 38252589  T
Q  101 caattattttgggac 115  Q
    || ||||||||||||    
T  38252590 cagttattttgggac 38252604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 29615853 - 29615742
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||||||||||||||||||| ||||||  ||||||| ||||||| |||||||||||||||||| ||||||||| |||||||||||||  ||||| |    
T  29615853 gtaaagtggaatatattgaattgggaatgatgaaagtagtattaattaaagttataaagggaaaaaaataattaatattgtattgaaaagtaaaatgatt 29615754  T
Q  101 caattattttgg 112  Q
    || |||||||||    
T  29615753 cagttattttgg 29615742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 44790474 - 44790589
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaa-agtaattaatactgtattgaaaagtggaatgac 99  Q
    |||||||||||||||||||||||| |||| |  ||||||| ||||||||||||||||||||||||| ||||||||||  |||||||||||||| |||| |    
T  44790474 gtaaagtggaatatattgaattgggaatggtgaaagtagtattaattagagttataaagggaaaaatagtaattaatgatgtattgaaaagtgaaatggc 44790573  T
Q  100 tcaattattttgggac 115  Q
    | ||||||||||||||    
T  44790574 ttaattattttgggac 44790589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 32967330 - 32967428
Alignment:
Q  2 taaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||||||||||||||||||  ||||||  ||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||    
T  32967330 taaagtggaatatattgaattgagaatgatgaaagtagtattaattagagttataaaggaaaaaaagtaactaatactgtattgaaaagtgaaatgact 32967428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 5392102 - 5391993
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaa-aaaagtaattaatactgtattgaaaagtggaatgactc 101  Q
    |||||||||||||||||||||| | || |  ||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  5392102 aaagtggaatatattgaattgggagtgttgaaagtagtattaattagagttataaagggaaaaaaagtaattaatattgtattgaaaagtgaaatgactc 5392003  T
Q  102 aattattttg 111  Q
    | ||||||||    
T  5392002 agttattttg 5391993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 34287131 - 34287242
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||||||||||||||||| ||||||||  ||||| | ||||||||| ||||||||| |||||||| ||||||  |||||||||||||| |||||||    
T  34287131 gtaaagtggaatatattgaattagaaatgatgaaagtaatattaattagaattataaaggaaaaaaagtgattaatgttgtattgaaaagtgaaatgact 34287230  T
Q  101 caattattttgg 112  Q
    || |||||||||    
T  34287231 cagttattttgg 34287242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 22325007 - 22325113
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||||||||||||||||||| |||||||  || |||| ||||  |||||||||||| ||||||| ||||||||| |||||||||||||| |||||||    
T  22325007 gtaaagtggaatatattgaattgaaaatgatgaaaatagttttaaccagagttataaagagaaaaaaataattaatattgtattgaaaagtgaaatgact 22325106  T
Q  101 caattat 107  Q
    |||||||    
T  22325107 caattat 22325113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 32241478 - 32241585
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||||||||||| |||||||||| |  |  ||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||    
T  32241478 aaagtggaatataatgaattggaagttgtgaaagtaatattaattagagttataaagggaaaaaagtaattaatattgtattgaaaagtgaaataactca 32241577  T
Q  103 attatttt 110  Q
     |||||||    
T  32241578 tttatttt 32241585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 39171596 - 39171484
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||  | ||||  || |||| |||||||||||||||||  ||||||||||||||||| | |||||||||||  |||||||||    
T  39171596 aaagtggaatatattgaattgtgagtgatgaaaatagtattaattagagttataaaaagaaaaaagtaattaatattatattgaaaagttaaatgactca 39171497  T
Q  103 attattttgggac 115  Q
     ||||||||||||    
T  39171496 gttattttgggac 39171484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 2349405 - 2349295
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||| ||||||||||||||||||||||| |  ||||| | ||||||||||||||||| | ||||| |||||||||| |||||||||| ||| |||||||    
T  2349405 gtaaattggaatatattgaattggaaatgttgaaagtaatattaattagagttataaaagaaaaaaggtaattaatattgtattgaaacgtgaaatgact 2349306  T
Q  101 caattattttg 111  Q
     | ||||||||    
T  2349305 aagttattttg 2349295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 34133182 - 34133072
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||| || |||||||||||||||| |||||  ||||| | |||||| |||||||||| |||||| | ||||||||| |||||||||||||| |||||||    
T  34133182 gtaaaatgaaatatattgaattggatatgatgaaagtaatattaattggagttataaaaggaaaataataattaatattgtattgaaaagtgtaatgact 34133083  T
Q  101 caattattttg 111  Q
    || ||||||||    
T  34133082 cagttattttg 34133072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 5962527 - 5962640
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtg-gaatgactc 101  Q
    |||||||||||||||||||||| | ||||  || || | |||||||||||||||||||| ||||||||||||||| ||||||| ||||||  ||||||||    
T  5962527 aaagtggaatatattgaattgggagtgatgaaattaatattaattagagttataaaggggaaaaagtaattaataatgtattggaaagtgaaaatgactc 5962626  T
Q  102 aattattttgggac 115  Q
    | ||||||| ||||    
T  5962627 agttattttaggac 5962640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 2195521 - 2195409
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||| |||||||||||||||| | ||||  ||||||| ||||||||||||||||  ||||||||||||||| |  |||||||||||||| ||||  |||    
T  2195521 aaagtagaatatattgaattgggagtgatgaaagtagtattaattagagttataattggaaaaaagtaattattgttgtattgaaaagtgaaatgggtca 2195422  T
Q  103 attattttgggac 115  Q
    ||| |||||||||    
T  2195421 atttttttgggac 2195409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 42412437 - 42412549
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||| | ||||  ||||||| |||||||||| |||||  |||||||||||||||||| || ||| ||||||| ||||| |||    
T  42412437 aaagtggaatatattgaattgggagtgatgaaagtagtattaattagagctataattggaaaaaagtaattaatattgcattaaaaagtgaaatgagtca 42412536  T
Q  103 attattttgggac 115  Q
     || |||||||||    
T  42412537 gtttttttgggac 42412549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 12653742 - 12653632
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaatt-aatactgtattgaaaagtggaatgac 99  Q
    |||||||||||||||||||||||  ||||||  ||||| | ||||| ||||||||||||||| |||||||||| |||| |||||||||||||| ||||||    
T  12653742 gtaaagtggaatatattgaattgagaatgatgaaagtaatattaatcagagttataaaggga-aaaagtaattaaatattgtattgaaaagtgaaatgac 12653644  T
Q  100 tcaattattttg 111  Q
    | | ||||||||    
T  12653643 ttagttattttg 12653632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 32231781 - 32231886
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattt 109  Q
    ||||||||||||||| | || |  ||||| | |||||||| |||||||  |||||||||||||||||| |||||||||||||| ||||| |||||| |||    
T  32231781 aatatattgaattgggagtggtgaaagtattattaattagtgttataattggaaaaaagtaattaatattgtattgaaaagtgaaatgagtcaatttttt 32231880  T
Q  110 tgggac 115  Q
    ||||||    
T  32231881 tgggac 32231886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 42558635 - 42558744
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||||||||||||||||||   | ||||  ||||||| |||||||||||| ||||  ||||||| ||||||||  |||||||||||||| |||||||||    
T  42558635 aaagtggaatatattgaattaagagtgatgaaagtagtattaattagagttgtaaaaagaaaaaaataattaatgatgtattgaaaagtgaaatgactca 42558734  T
Q  103 attattttgg 112  Q
     |||||||||    
T  42558735 cttattttgg 42558744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 9014653 - 9014545
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||| ||||||||||||||  ||||||  ||||||| ||||| ||| ||||||| |||||||||||||||| | |||||| ||||||  |||||||||    
T  9014653 aaagtgtaatatattgaattgtgaatgatgaaagtagtattaataagaattataaaaggaaaaaagtaattaaaattgtattaaaaagtaaaatgactca 9014554  T
Q  103 attattttg 111  Q
     ||||||||    
T  9014553 gttattttg 9014545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 14690013 - 14689901
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||| |||||||||||||||| | || |  ||||||| |||||||| |||||||  |||||||||||||||||| |||||||||||||| ||||  |||    
T  14690013 aaagtagaatatattgaattgggagtggtgaaagtagtattaattagtgttataattggaaaaaagtaattaatattgtattgaaaagtgaaatgggtca 14689914  T
Q  103 attattttgggac 115  Q
    ||| || ||||||    
T  14689913 atttttctgggac 14689901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 28802820 - 28802712
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||  | ||||  || || | ||||||||||||||||||||||||||||| |||||  |||||||||||||| |||| || |    
T  28802820 aaagtggaatatattgaattgagagtgatgaaaatattattaattagagttataaagggaaaaaagtagttaatgatgtattgaaaagtgaaatggctga 28802721  T
Q  103 attattttg 111  Q
     ||||||||    
T  28802720 cttattttg 28802712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 33925138 - 33925221
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattga 86  Q
    ||||||||||||||||||||| || |  |  ||||||| ||||||||||||||||| |||||||||||||||||| ||||||||    
T  33925138 aaagtggaatatattgaattgaaagttgtgaaagtagtattaattagagttataaaaggaaaaaagtaattaatattgtattga 33925221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 44615419 - 44615526
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||| |||||||||||||||  | ||||  || || | ||||||||||||||||||||  |||||||||||||| ||||||| |||||| |||||||||    
T  44615419 aaagtagaatatattgaattgagagtgatgaaaataatattaattagagttataaagggggaaaagtaattaatattgtattggaaagtgaaatgactca 44615518  T
Q  103 attatttt 110  Q
     |||||||    
T  44615519 gttatttt 44615526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 21587330 - 21587217
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaa-gtaattaatactgtattgaaaagtggaatgactc 101  Q
    |||||||||||||||||||||| | ||||  ||||||| || || || ||||||||| ||||||| |||||||||| || ||||||||||| |||| |||    
T  21587330 aaagtggaatatattgaattgggagtgatgaaagtagtattgatcagcgttataaagagaaaaaaagtaattaatattgcattgaaaagtgaaatggctc 21587231  T
Q  102 aattattttgggac 115  Q
    |  |||||||||||    
T  21587230 agatattttgggac 21587217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 34 - 112
Target Start/End: Complemental strand, 31132752 - 31132673
Alignment:
Q  34 aagtagtgttaattagagttataa-agggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgg 112  Q
    ||||||| |||||||||||||||| ||| |||||||||||||||| ||||||||||| || ||||||||  |||||||||    
T  31132752 aagtagtattaattagagttataagaggaaaaaaagtaattaatattgtattgaaaaatgaaatgactccgttattttgg 31132673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 31410662 - 31410769
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||||||||||||||||||   | | ||  ||||||| ||||||| ||||||| | || ||||||||||||||| ||||||| |||||| |||||||||    
T  31410662 aaagtggaatatattgaattaagagtaatgaaagtagtattaattaaagttatagaagggaaaaagtaattaatattgtattggaaagtgaaatgactca 31410761  T
Q  103 attatttt 110  Q
     |||||||    
T  31410762 gttatttt 31410769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 886502 - 886604
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||| |||||||| ||||||  ||||||  ||||| | |||||||| |||||||  | |||||||||||||||| |||||||||||||| ||||| |||    
T  886502 aaagtagaatatatcgaattgagaatgataaaagtaatattaattagtgttataattgaaaaaaagtaattaatattgtattgaaaagtgaaatgagtca 886601  T
Q  103 att 105  Q
    |||    
T  886602 att 886604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 42 - 115
Target Start/End: Original strand, 13085044 - 13085117
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    |||||||||||||||   ||||||| |||||||||| |||||||||||||| ||||| |||||| |||||||||    
T  13085044 ttaattagagttatatttggaaaaaggtaattaatattgtattgaaaagtgaaatgaatcaatttttttgggac 13085117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 10728976 - 10729087
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||| | ||||| ||||||| ||||||||||||| ||  ||||||| ||||||| |  |  ||||||||||| ||||  |||    
T  10728976 aaagtggaatatattgaattgggagtgattaaagtagtattaattagagttacaattggaaaaatgtaattattgtttaattgaaaagtgaaatgggtca 10729075  T
Q  103 attattttgggac 115  Q
    ||| |||||||||    
T  10729076 att-ttttgggac 10729087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 36012057 - 36012120
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatg 97  Q
    ||||||| ||||||||||||||||  |||||||| ||||||||| |||||||||||||| ||||    
T  36012057 aagtagtattaattagagttataagtggaaaaaaataattaatattgtattgaaaagtgaaatg 36012120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 45421025 - 45421088
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatg 97  Q
    ||||||| |||||||| |||||||  |||||||||||||||||| |||||||||||||| ||||    
T  45421025 aagtagtattaattagtgttataattggaaaaaagtaattaatattgtattgaaaagtgaaatg 45421088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 2119730 - 2119657
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    ||||||||||||||||||| |||| | ||||||||| |||||||||| ||| |||  |||| ||||||||||||    
T  2119730 ttaattagagttataaaggaaaaataataattaatattgtattgaaatgtgaaatagctcagttattttgggac 2119657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 2797093 - 2796992
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaaggg-aaaaaagtaattaatactgtattgaaaagtggaatgactc 101  Q
    ||||| |||||||||||||||| | | ||  ||||| | ||||||||||||||||  || |||||| ||||||||| |||||||||||||| ||||| ||    
T  2797093 aaagtagaatatattgaattgggagtaatgaaagtaatattaattagagttataattggtaaaaaaataattaatattgtattgaaaagtgaaatgagtc 2796994  T
Q  102 aa 103  Q
    ||    
T  2796993 aa 2796992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 14748760 - 14748849
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaa-aagtaattaatactgtattgaaaagt 91  Q
    ||||| |||||||||||||||  |||| |  ||||||| |||||||| |||||||  |||||| |||||||||||| |||||||||||||    
T  14748760 aaagtagaatatattgaattgagaatggtgaaagtagtattaattagtgttataattggaaaaaaagtaattaatattgtattgaaaagt 14748849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 41726576 - 41726479
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatga 98  Q
    ||||||| |||||||||||||||| | |  |  || |||| ||||||| ||||||||  | |||||||||||||||| |||||||||||||| |||||    
T  41726576 gtaaagtagaatatattgaattgggagttgtgaaattagtattaattacagttataattgaaaaaaagtaattaatattgtattgaaaagtgaaatga 41726479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 4274392 - 4274460
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattatttt 110  Q
    ||||||||||||||||| | |||||||||||||||  |||||||||||| | ||||||| | |||||||    
T  4274392 ttaattagagttataaatgaaaaaaagtaattaatgatgtattgaaaagcgaaatgacttacttatttt 4274460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 45425538 - 45425429
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaa--aaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||||||||||| |||| | ||||||  ||||| | ||||||||||||||||||  |||  |||  ||||||||   ||||||||| || |||||||    
T  45425538 aaagtggaatatattaaattaggaatgatgaaagtaatattaattagagttataaagaaaaaataaataaattaatatcatattgaaaaatgaaatgact 45425439  T
Q  101 caattatttt 110  Q
    ||||||||||    
T  45425438 caattatttt 45425429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 8418354 - 8418461
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatac---tgtattgaaaagtggaatg 97  Q
    ||||||| ||||||| |||||||  | ||||  ||||||| ||||||||||||||||  | |||||| ||||||||||   | |||||||||||| ||||    
T  8418354 gtaaagtagaatatactgaattgagagtgatgaaagtagtattaattagagttataattgaaaaaaaataattaatactattatattgaaaagtgaaatg 8418453  T
Q  98 actcaatt 105  Q
    | ||||||    
T  8418454 agtcaatt 8418461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 34133071 - 34133022
Alignment:
Q  66 aagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    |||||||||||| |||||| ||||||| ||||||||| ||||||||||||    
T  34133071 aagtaattaatattgtattaaaaagtgtaatgactcagttattttgggac 34133022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 42797773 - 42797830
Alignment:
Q  35 agtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtg 92  Q
    |||||| ||||||||||||||||  | |||||| ||||||||| ||||||||||||||    
T  42797773 agtagttttaattagagttataattgaaaaaaaataattaatattgtattgaaaagtg 42797830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 139026 - 138974
Alignment:
Q  63 aaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    ||||| ||||||||| |||||||||||||| ||||||||  ||||||||||||    
T  139026 aaaaaataattaatattgtattgaaaagtgaaatgactcggttattttgggac 138974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 4480536 - 4480596
Alignment:
Q  42 ttaattagagttataaagggaaaaaagt-aattaatactgtattgaaaagtggaatgactc 101  Q
    ||||||||||||||||||| |||||| | |||||||| ||||||||||| || ||||||||    
T  4480536 ttaattagagttataaaggaaaaaaaattaattaatattgtattgaaaaatgaaatgactc 4480596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 22490444 - 22490380
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaa 67  Q
    |||||||||||||||||||||  ||||||   ||| || ||||||||||||||||| ||||||||    
T  22490444 aaagtggaatatattgaattgagaatgatgatagttgtattaattagagttataaatggaaaaaa 22490380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 28791355 - 28791267
Alignment:
Q  9 gaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatg 97  Q
    |||||||||||||||| | |  |  ||||||| ||||||||||||||||  ||| |||||||||||||  || ||||||||||| ||||    
T  28791355 gaatatattgaattgggagttgtgaaagtagtattaattagagttataattggagaaaagtaattaatgttgcattgaaaagtgaaatg 28791267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 33826278 - 33826181
Alignment:
Q  9 gaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattatt 108  Q
    |||||||||||||||  ||||||  ||||||| || |||||||||||||  | ||||    |||||||| |||||||||||||| ||| | |||||||||    
T  33826278 gaatatattgaattgagaatgatgaaagtagtattgattagagttataattgaaaaa----aattaatattgtattgaaaagtgaaataagtcaattatt 33826183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 115
Target Start/End: Original strand, 43844975 - 43845050
Alignment:
Q  42 ttaattagagttataaagggaaaa--aagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    ||||||||||||||||  ||||||  |||||||||||| ||||||||||||||  |||| |||||| || ||||||    
T  43844975 ttaattagagttataattggaaaaaaaagtaattaatattgtattgaaaagtgatatgagtcaatttttatgggac 43845050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 7258427 - 7258509
Alignment:
Q  9 gaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtg 92  Q
    |||||||||||||||| | ||||  ||||||| ||||||||||||||||  || |||||| |||||||| || ||| |||||||    
T  7258427 gaatatattgaattgggagtgatgaaagtagtattaattagagttataattgg-aaaaaggaattaatattgcattaaaaagtg 7258509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 29730982 - 29731029
Alignment:
Q  63 aaaaagtaattaatactgtattgaaaagtggaatgactcaattatttt 110  Q
    ||||| ||||||||| |||||||||||||| ||||||||| |||||||    
T  29730982 aaaaaataattaatattgtattgaaaagtgaaatgactcagttatttt 29731029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 32679057 - 32678994
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatg 97  Q
    ||||||| ||||||||||||||||  | ||||| |||||||||  |||||||||||||| ||||    
T  32679057 aagtagtattaattagagttataattgaaaaaaggtaattaatgttgtattgaaaagtgaaatg 32678994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 38201454 - 38201544
Alignment:
Q  12 tatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaa 103  Q
    ||||||||||||| | | ||  ||||| | ||||||||||||||||| | |||||| |||||| || |||||||||||||| ||||| ||||    
T  38201454 tatattgaattgggagtaatgaaagtaatattaattagagttataaatgaaaaaaa-taattattattgtattgaaaagtgaaatgagtcaa 38201544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 2875171 - 2875229
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtg 92  Q
    ||||||| ||||||||||||||||  || ||||| ||||| ||| ||||||||||||||    
T  2875171 aagtagtattaattagagttataattggtaaaaaataattcatattgtattgaaaagtg 2875229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 3442526 - 3442449
Alignment:
Q  13 atattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagt 91  Q
    ||||||||||| |||||||  || |||| |||||||||||||| ||  ||||||| ||||||||| || ||||||||||    
T  3442526 atattgaattgaaaatgatgaaaatagtattaattagagttat-aattgaaaaaaataattaatattgaattgaaaagt 3442449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 8618174 - 8618092
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtg 92  Q
    ||||||||||||||||| || |  || |||| ||||||| ||||||||  ||| ||||||||||||||  |||||| ||||||    
T  8618174 aatatattgaattggaagtggtaaaaatagtattaattaaagttataattggataaaagtaattaatatagtattggaaagtg 8618092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 12958275 - 12958325
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtg 92  Q
    ||||||||||||||||   ||||||||||||||||| |||||| |||||||    
T  12958275 ttaattagagttataattagaaaaaagtaattaatattgtattaaaaagtg 12958325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 14117517 - 14117415
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||| ||||||||||||||| || |  |  ||||| | ||||||||||||||||  | ||||||  |||||||  |||||||||||||| ||||| |    
T  14117517 gtaaagttgaatatattgaattgaaagttgtgaaagtaatattaattagagttataattgaaaaaaaaaaattaatgttgtattgaaaagtgaaatgagt 14117418  T
Q  101 caa 103  Q
    |||    
T  14117417 caa 14117415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 27868379 - 27868453
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaata 77  Q
    ||||| |||||||||||||||  ||||||  ||||||| ||||||| | ||||||  | ||||||||||||||||    
T  27868379 aaagtagaatatattgaattgagaatgatgaaagtagtattaattaaaattataattgaaaaaaagtaattaata 27868453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 33746278 - 33746359
Alignment:
Q  8 ggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaag 90  Q
    |||||||||||||||  |||||||  || |||| ||||||| ||||||||| |||||||| ||||||||| ||| || |||||    
T  33746278 ggaatatattgaattaaaaatgatgaaaatagtattaattatagttataaa-ggaaaaaaataattaatattgttttaaaaag 33746359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 8566493 - 8566554
Alignment:
Q  36 gtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatg 97  Q
    ||||| |||||||| |||||||  | |||||| ||||||||| |||||||||||||| ||||    
T  8566493 gtagtattaattagtgttataattgaaaaaaaataattaatattgtattgaaaagtgaaatg 8566554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 26570272 - 26570320
Alignment:
Q  62 aaaaaagtaattaatactgtattgaaaagtggaatgactcaattatttt 110  Q
    |||| ||||||||||| |||||||||||||| ||||| ||| |||||||    
T  26570272 aaaatagtaattaatattgtattgaaaagtgaaatgaatcagttatttt 26570320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 19532972 - 19533085
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||| ||||||||||| || |||||||  ||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||  |||||||    
T  19532972 gtaaagtgaaatatattgaactgtaaatgatgaaagtagtattaattaaagttataaagggaaaaaagtaattaatattgtattgaaaagtaaaatgact 19533071  T
Q  101 caattattttggga 114  Q
    || |||||||||||    
T  19533072 cagttattttggga 19533085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 27698858 - 27698753
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattt 109  Q
    ||||||||||||||  ||||||  ||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  27698858 aatatattgaattgagaatgatgaaagtaatattaattagagttataaagggaaaaaagtaattaatattgtattgaaaagtgaaatgactcaattattt 27698759  T
Q  110 tgggac 115  Q
    | ||||    
T  27698758 taggac 27698753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 36467248 - 36467358
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||| ||||||||||||||||||||||  || |||| |||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||    
T  36467248 gtaaagtgaaatatattgaattggaaatgatgaaaatagtattaatttgagttataaaggggaaaaagtaattaatattgtattgaaaagtgaaatgact 36467347  T
Q  101 caattattttg 111  Q
    || | ||||||    
T  36467348 cagtcattttg 36467358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 49494216 - 49494325
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||||||||||||||||| ||||||||  ||||| | ||||||| ||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  49494216 gtaaagtggaatatattgaattagaaatgatgaaagtaatattaattaaagttataaagg-aaaaaagtaattaatagtgtattgaaaagtgaaatgact 49494314  T
Q  101 caattattttg 111  Q
    | |||||||||    
T  49494315 cgattattttg 49494325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 7 - 115
Target Start/End: Complemental strand, 8327766 - 8327658
Alignment:
Q  7 tggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaatta 106  Q
    |||||||||||||||||  | ||||  ||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||| |||| |||| |||    
T  8327766 tggaatatattgaattgagagtgatgaaagtagtattaattagagttataaagggaaaaaagtaattaatgatgtattgaaaagtgaaatggctcattta 8327667  T
Q  107 ttttgggac 115  Q
    |||||||||    
T  8327666 ttttgggac 8327658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 45889303 - 45889415
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||||||||||||||||||   ||||||  ||||||| ||||||||||||||||| |||||||||||||||||   ||||||||||||| |||||||||    
T  45889303 aaagtggaatatattgaattatgaatgatgaaagtagtattaattagagttataaaaggaaaaaagtaattaatgacgtattgaaaagtgaaatgactca 45889402  T
Q  103 attattttgggac 115  Q
     ||||||||||||    
T  45889403 cttattttgggac 45889415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 51848748 - 51848863
Alignment:
Q  2 taaagtggaatatattgaattggaaatgatttaa--gtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgac 99  Q
    ||||||||||||||||||||||||||||||  ||  ||||  ||||||||||||||||||| |||||||||||||||  |||||||||||||| |||| |    
T  51848748 taaagtggaatatattgaattggaaatgataaaaaagtagcattaattagagttataaaggaaaaaaagtaattaatgatgtattgaaaagtgaaatgtc 51848847  T
Q  100 tcaattattttgggac 115  Q
    ||| ||||||||||||    
T  51848848 tcacttattttgggac 51848863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 28277091 - 28277205
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||| |||||||||||||| |||||||  |||| || |||||||||||||||||| ||||||||||||||||| |||||| |||| || |||||||    
T  28277091 gtaaagtgaaatatattgaattgaaaatgatgaaagtggtattaattagagttataaagagaaaaaagtaattaatattgtattaaaaaatgaaatgact 28277190  T
Q  101 caattattttgggac 115  Q
    || ||||||| ||||    
T  28277191 cagttattttaggac 28277205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 4466207 - 4466317
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||| |||||||||| ||||||| || |  ||||||| ||||||||||||||||  |||||||| ||||||||| ||||||| |||||| |||||||    
T  4466207 gtaaagtagaatatattgtattggaagtggtgaaagtagtattaattagagttataattggaaaaaaataattaatattgtattggaaagtgaaatgact 4466306  T
Q  101 caattattttg 111  Q
    |||||||||||    
T  4466307 caattattttg 4466317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 7785327 - 7785440
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||| ||||||||||||||  |  |||  ||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  7785327 gtaaagtgaaatatattgaattgagagcgataaaagtagtattaattagagttataaagggaaaaaa-taattaatattgtattgaaaagtgaaatgact 7785425  T
Q  101 caattattttgggac 115  Q
    || ||||| ||||||    
T  7785426 cagttattatgggac 7785440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 28908147 - 28908037
Alignment:
Q  2 taaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactc 101  Q
    |||||| |||||||||||||||  | ||||  ||||||| || |||||||||||||||| |||||| |||||||||| ||||| ||||||| ||||||||    
T  28908147 taaagtagaatatattgaattgatagtgatgaaagtagtatttattagagttataaaggaaaaaaaataattaataccgtattaaaaagtgaaatgactc 28908048  T
Q  102 aattattttgg 112  Q
    |||||||||||    
T  28908047 aattattttgg 28908037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 28839392 - 28839284
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||| | ||||  ||||||| ||||||| ||||||||||||| ||||||||||||   |||||||||||||| |||||||||    
T  28839392 aaagtggaatatattgaattgggagtgatgaaagtagtattaattatagttataaaggga-aaaagtaattaaatatgtattgaaaagtgaaatgactca 28839294  T
Q  103 attattttgg 112  Q
     |||||||||    
T  28839293 cttattttgg 28839284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 3555610 - 3555722
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||| |  |||  ||||||| ||||||||||||||||| |||||||||||||||||  |||| |||||| || ||| |||||    
T  3555610 aaagtggaatatattgaattgggatagatgaaagtagtattaattagagttataaaaggaaaaaagtaattaatgatgtaatgaaaaatgaaataactca 3555709  T
Q  103 attattttgggac 115  Q
     ||||||||||||    
T  3555710 cttattttgggac 3555722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 46536393 - 46536285
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||||||||||||| ||||   | ||||  ||||||| ||||||||||||||| ||||||||| |||||||||| |||||||||||||| |||||||||    
T  46536393 aaagtggaatatattaaattaagagtgatgaaagtagtattaattagagttatagagggaaaaatgtaattaatattgtattgaaaagtgaaatgactca 46536294  T
Q  103 attattttg 111  Q
     ||||||||    
T  46536293 gttattttg 46536285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 48242643 - 48242751
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||||||||||||||||||  ||||||  ||||| | ||||||| |||||||||  ||||||||||||||||| |||||||||||||| |||||||    
T  48242643 gtaaagtggaatatattgaattgagaatgataaaagtaatattaattaaagttataaaaagaaaaaagtaattaatattgtattgaaaagtgaaatgact 48242742  T
Q  101 caattattt 109  Q
     | ||||||    
T  48242743 aagttattt 48242751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 51749238 - 51749350
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||| | ||||  ||||| | |||||||||||||||||||||||||| ||||||||  | ||||||||| || |||||||||    
T  51749238 aaagtggaatatattgaattgggagtgatgaaagtaatattaattagagttataaagggaaaaaaataattaatgatatattgaaaaatgaaatgactca 51749337  T
Q  103 attattttgggac 115  Q
     ||||||| ||||    
T  51749338 cttattttaggac 51749350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 2219501 - 2219614
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||  ||||||||||||||||| |  |  | ||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||  |    
T  2219501 gtaaagtaaaatatattgaattggaagttgtgaacgtagtattaattagagttataaagggaaaa-agtaattaatattgtattgaaaagtgaaatggtt 2219599  T
Q  101 caattattttgggac 115  Q
    |||||||||||||||    
T  2219600 caattattttgggac 2219614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 52830467 - 52830575
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||||||||||||| |||||||| ||||  ||||| |  |||||| | |||||||| ||||||||||||||||| |||||||||||||| |||||||    
T  52830467 gtaaagtggaatatattcaattggaa-tgatgaaagtaatactaattaaaattataaagagaaaaaagtaattaatattgtattgaaaagtgaaatgact 52830565  T
Q  101 caattatttt 110  Q
    || |||||||    
T  52830566 cagttatttt 52830575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 29225806 - 29225694
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||| |||||||||||||||| | ||||  ||||||| ||||||||||||||||  ||||||||||||||| || |||||||||||||| ||||  |||    
T  29225806 aaagtagaatatattgaattgggagtgatgaaagtagtattaattagagttataattggaaaaaagtaattattattgtattgaaaagtgaaatgggtca 29225707  T
Q  103 attattttgggac 115  Q
    ||  |||||||||    
T  29225706 atctttttgggac 29225694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 46496071 - 46495963
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||| |   ||||  ||||||| ||||||||||||||||||| |||||| ||||||||  ||||||||||| || |||||||||    
T  46496071 aaagtggaatatattgaattaggcgtgatgaaagtagtattaattagagttataaaggaaaaaaaataattaatgatgtattgaaaaatgaaatgactca 46495972  T
Q  103 attattttg 111  Q
     ||||||||    
T  46495971 cttattttg 46495963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 11324301 - 11324194
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||  | ||||  | ||||| ||||||| ||||||||||||||||||||| |||||  |||||||||||||| ||||| |||    
T  11324301 aaagtggaatatattgaattgagagtgatgaatgtagtattaattatagttataaagggaaaaaagtagttaatgatgtattgaaaagtgaaatgattca 11324202  T
Q  103 attatttt 110  Q
     |||||||    
T  11324201 gttatttt 11324194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 11482322 - 11482215
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||  | ||||  | ||||| ||||||| ||||||||||||||||||||| |||||  |||||||||||||| ||||| |||    
T  11482322 aaagtggaatatattgaattgagagtgatgaatgtagtattaattatagttataaagggaaaaaagtagttaatgatgtattgaaaagtgaaatgattca 11482223  T
Q  103 attatttt 110  Q
     |||||||    
T  11482222 gttatttt 11482215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 38664448 - 38664346
Alignment:
Q  9 gaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattatt 108  Q
    |||||||||||||| | ||||||  ||||||| |||||||||||||||||  ||||||| ||||||||| |||||| |||| |  |||||||||||||||    
T  38664448 gaatatattgaattaggaatgatgaaagtagtattaattagagttataaaaagaaaaaaataattaatattgtattaaaaaataaaatgactcaattatt 38664349  T
Q  109 ttg 111  Q
    |||    
T  38664348 ttg 38664346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 17342881 - 17342773
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||| ||||||||||||||  | ||||  ||||||| |||||||||||||||| |  |||| ||||||||||| |||||||||||||| ||| |||||    
T  17342881 aaagtgaaatatattgaattgagagtgataaaagtagtattaattagagttataatgaaaaaatagtaattaatattgtattgaaaagtgaaataactca 17342782  T
Q  103 attattttg 111  Q
     ||||||||    
T  17342781 gttattttg 17342773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 36232843 - 36232930
Alignment:
Q  2 taaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaa 89  Q
    |||||| ||||||||||||||||||||| |  ||||||| ||||||||||||||||  |||||||||||||||||  | |||||||||    
T  36232843 taaagtagaatatattgaattggaaatggtgaaagtagtattaattagagttataattggaaaaaagtaattaatgttttattgaaaa 36232930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 42 - 112
Target Start/End: Complemental strand, 6785017 - 6784947
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgg 112  Q
    |||||||||| |||||| | |||||||||||||||| |||||||||||||| ||||| |||||||||||||    
T  6785017 ttaattagagatataaaagaaaaaaagtaattaatattgtattgaaaagtgaaatgattcaattattttgg 6784947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 11425922 - 11426036
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||| |||||||||| ||||||| |  |  ||||||| ||||||| ||||||||  | |||||||||||||||| ||||||| |||||| |||||||    
T  11425922 gtaaagtagaatatattgtattggaagtagtgaaagtagtattaattaaagttataattgaaaaaaagtaattaatattgtattggaaagtgaaatgact 11426021  T
Q  101 caattattttgggac 115  Q
    || ||||||| ||||    
T  11426022 cagttattttaggac 11426036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 16040132 - 16040023
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||| |||||||||| ||||||| || |  ||||| | ||| ||||||||||||  | |||||||||||||||| ||||||| |||||| |||||||    
T  16040132 gtaaagtagaatatattgtattggaagtggtgaaagtaatattatttagagttataattgaaaaaaagtaattaatattgtattggaaagtgaaatgact 16040033  T
Q  101 caattatttt 110  Q
    || |||||||    
T  16040032 cagttatttt 16040023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 32347958 - 32347885
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||| |||  |||| |||| |||||||    
T  32347958 ttaattagagttataaagggaaaaaagtaattaatgatgtattgaaaagtgaaatagctcacttatattgggac 32347885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 36784328 - 36784259
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttg 111  Q
    ||||||| ||||||||| | |||||||||||||||| |||||||||||||| ||||||||| ||||||||    
T  36784328 ttaattatagttataaatgaaaaaaagtaattaatattgtattgaaaagtgaaatgactcagttattttg 36784259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 43895861 - 43895792
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttg 111  Q
    |||||||||||| ||||| | ||||||||||||||| |||||||||||||| ||||||||| ||||||||    
T  43895861 ttaattagagttgtaaagaggaaaaagtaattaatattgtattgaaaagtgaaatgactcatttattttg 43895792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 17724769 - 17724877
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||| |||| ||||||||||| | ||||  || |||| |||||||||||||||||  ||  ||| ||||||||| ||||||||||| || |||||||||    
T  17724769 aaagtagaatttattgaattgggagtgatgaaaatagtattaattagagttataaaaagattaaaataattaatattgtattgaaaaatgaaatgactca 17724868  T
Q  103 attattttg 111  Q
    |||||||||    
T  17724869 attattttg 17724877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 5040631 - 5040742
Alignment:
Q  4 aagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaa 103  Q
    ||||| ||||||||||||| | | ||||  || ||||  |||||| |||| |||||||||||||| |||||||| |||||| ||||||| |||||||| |    
T  5040631 aagtgaaatatattgaattaggagtgatgaaaatagtaataattaaagttgtaaagggaaaaaagcaattaatattgtattaaaaagtgaaatgactcta 5040730  T
Q  104 ttattttgggac 115  Q
    ||||||| ||||    
T  5040731 ttattttaggac 5040742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 2886224 - 2886135
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtg 92  Q
    ||||| |||||||||||||||  | || |  ||||||| |||||||| |||||||  |||||||||||||||||| ||||||||||||||    
T  2886224 aaagtagaatatattgaattgagagtggtgaaagtagtattaattagtgttataattggaaaaaagtaattaatattgtattgaaaagtg 2886135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 24131462 - 24131567
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattt 109  Q
    ||||||||||||||| | || |  ||||||| |||||||| |||||||  |||||||||||||||||| || ||||||||||| ||| | |||||| ||     
T  24131462 aatatattgaattgggagtggtgaaagtagtattaattagtgttataattggaaaaaagtaattaatattgcattgaaaagtgaaataagtcaatttttc 24131561  T
Q  110 tgggac 115  Q
    ||||||    
T  24131562 tgggac 24131567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 26756030 - 26755969
Alignment:
Q  2 taaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaa 63  Q
    ||||||| |||||||||||||| |||||||  ||||||| ||||||||||||||||||||||    
T  26756030 taaagtgtaatatattgaattgaaaatgatgaaagtagtattaattagagttataaagggaa 26755969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 5442393 - 5442286
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||||| |  |  ||||| | ||||||| ||||||||| |||||||||||||||||  | |||||||||||| |||  ||||    
T  5442393 aaagtggaatatattgaattggaagttgtgaaagtaatattaattatagttataaaaggaaaaaagtaattaat-ttatattgaaaagtgaaatagctca 5442295  T
Q  103 attattttg 111  Q
     ||||||||    
T  5442294 gttattttg 5442286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 7787711 - 7787623
Alignment:
Q  22 tggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattatttt 110  Q
    ||||||||||  || |||| ||||||| |||||||||||| ||||||||||||||| ||||| ||||| || |||| |||| |||||||    
T  7787711 tggaaatgatggaaatagtattaattatagttataaaggggaaaaagtaattaatattgtatcgaaaaatgaaatggctcagttatttt 7787623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 10370281 - 10370349
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattatttt 110  Q
    |||||||||||||||||||||||||| ||||||||| ||||||| |||||| |||  |||| |||||||    
T  10370281 ttaattagagttataaagggaaaaaaataattaatattgtattggaaagtgaaatagctcagttatttt 10370349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 8773295 - 8773179
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaaggg----aaaaaagtaattaatactgtattgaaaagtggaatga 98  Q
    ||||||||||||||| || | ||| ||||  ||||||| ||||||||||||||||| ||    |||||||||||||||| | ||||||||| || |||      
T  8773295 aaagtggaatatattaaactagaagtgatgaaagtagtattaattagagttataaaaggaaaaaaaaaagtaattaatattctattgaaaaatgaaatag 8773196  T
Q  99 ctcaattattttgggac 115  Q
    |||| ||||||||||||    
T  8773195 ctcagttattttgggac 8773179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 30749777 - 30749722
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaa 89  Q
    ||||||| |||| ||||||||||||| ||||||||||||||||| |||||||||||    
T  30749777 aagtagtattaactagagttataaagagaaaaaagtaattaatattgtattgaaaa 30749722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 30771228 - 30771173
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaa 89  Q
    ||||||| |||| ||||||||||||| ||||||||||||||||| |||||||||||    
T  30771228 aagtagtattaactagagttataaagagaaaaaagtaattaatattgtattgaaaa 30771173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 12267684 - 12267786
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||| |||||||||||||||| | |  |  ||||||| |||| |||||||||||  |||||||||||||||||   ||||||||||||| ||||| |    
T  12267684 gtaaagtagaatatattgaattgggagttgtgaaagtagtattaactagagttataattggaaaaaagtaattaatgtcgtattgaaaagtgaaatgagt 12267783  T
Q  101 caa 103  Q
    |||    
T  12267784 caa 12267786  T

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Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 26583775 - 26583673
Alignment:
Q  9 gaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattatt 108  Q
    |||||||||||||||| | ||||  || || | |||||||| |||||||  |||| ||||||||||||| |||||||||||||| ||||  |||||| ||    
T  26583775 gaatatattgaattgggagtgatgaaaatattattaattagtgttataattggaataaagtaattaatattgtattgaaaagtgaaatgggtcaattttt 26583676  T
Q  109 ttg 111  Q
    |||    
T  26583675 ttg 26583673  T

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Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 49944833 - 49944737
Alignment:
Q  12 tatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattatttt 110  Q
    ||||||||||||| | ||||  |||| || ||||||||||||||||| | |||||||||||||||| |||||||||| ||| ||||||||  |||||||    
T  49944833 tatattgaattggtagtgatgaaagt-gtattaattagagttataaaag-aaaaaagtaattaatattgtattgaaaggtgaaatgactcggttatttt 49944737  T

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Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 50267491 - 50267561
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaa 71  Q
    |||||||| ||||||||||||||| ||||||  ||||| | ||||||||| ||||||| ||||||||||||    
T  50267491 gtaaagtgaaatatattgaattgggaatgatgaaagtaatattaattagaattataaaaggaaaaaagtaa 50267561  T

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Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 52432367 - 52432277
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagt 91  Q
    |||||||| |||||||||||||| || |  |  |||||   ||||||||||||||||| | |||||||||||||||| |||||||||||||    
T  52432367 gtaaagtgaaatatattgaattgtaagttgtgaaagtaacattaattagagttataaaagaaaaaaagtaattaatattgtattgaaaagt 52432277  T

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Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 29756197 - 29756293
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaa--aagtaattaatactgtattgaaaagtggaatg 97  Q
    ||||| |||||||||||||||| | || |  ||||||| |||||||| |||||||  ||||||  |||||||||||| |||||||||||||| ||||    
T  29756197 aaagtagaatatattgaattgggagtggtgaaagtagtattaattagtgttataattggaaaaaaaagtaattaatattgtattgaaaagtgaaatg 29756293  T

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Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 46880470 - 46880364
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||| ||||||||| ||||| | |||||  ||||| | ||| |||||||||||||  ||||||| ||||||||   ||||||||||||| |||||||    
T  46880470 gtaaagttgaatatattaaattg-agatgatgaaagtaatattagttagagttataaaatgaaaaaaataattaat---gtattgaaaagtgaaatgact 46880375  T
Q  101 caattattttg 111  Q
    || ||||||||    
T  46880374 cagttattttg 46880364  T

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Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 16451653 - 16451590
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatg 97  Q
    ||||||| ||||||| ||||||||  |||||||||||||||||  |||||||||||||| ||||    
T  16451653 aagtagtattaattaaagttataattggaaaaaagtaattaatgttgtattgaaaagtgaaatg 16451590  T

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Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 16460806 - 16460743
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatg 97  Q
    ||||||| ||||||| ||||||||  |||||||||||||||||  |||||||||||||| ||||    
T  16460806 aagtagtattaattaaagttataattggaaaaaagtaattaatgttgtattgaaaagtgaaatg 16460743  T

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Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 105
Target Start/End: Original strand, 18186292 - 18186362
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaatt 105  Q
    ||||||| ||||||||||||||||  | |||||||||| ||||| |||||||||||||| ||||| ||||||    
T  18186292 aagtagtattaattagagttataattgaaaaaaagtaa-taatattgtattgaaaagtgaaatgagtcaatt 18186362  T

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Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 27831899 - 27831804
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagt-tataaagggaaaaaagtaattaatactgtattgaaaagtggaatg 97  Q
    ||||||||| |||||||||||| | ||||  ||||||| ||||||||||| |||||  ||||||| |||||||||  || ||||||||||| ||||    
T  27831899 aaagtggaagatattgaattgggagtgatgaaagtagtattaattagagtgtataattggaaaaaggtaattaatgttgcattgaaaagtgaaatg 27831804  T

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Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 34877145 - 34877251
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||| |||||||||||||||  | ||||  || || | |||||||||||||||| | ||||| ||||||||||| |||||||||||||  ||||| |||    
T  34877145 aaagttgaatatattgaattgtgagtgatgaaaataatattaattagagttataatgagaaaa-agtaattaatattgtattgaaaagtaaaatgattca 34877243  T
Q  103 attatttt 110  Q
     |||||||    
T  34877244 gttatttt 34877251  T

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Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 29225463 - 29225544
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattg 85  Q
    ||||| |||||||||||||||||| || |  ||||||| ||| || |||||||||  |||||||||||||||||| |||||||    
T  29225463 aaagtagaatatattgaattggaagtggtgaaagtagtattattt-gagttataattggaaaaaagtaattaatattgtattg 29225544  T

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Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 37525104 - 37525031
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaata 77  Q
    ||||||||||||||||||||| ||||||   || |||| ||||||||||||||||||| |||||| | |||||||    
T  37525104 aaagtggaatatattgaattgaaaatgacgaaa-tagtattaattagagttataaaggaaaaaaaatcattaata 37525031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 3718902 - 3719010
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||  ||||||||||||||  | ||||  | ||||| |||||||||||||||   |||||||| ||||||||| || ||||||||||| ||||| |    
T  3718902 gtaaagtataatatattgaattgagagtgatgaaggtagtattaattagagttatagttggaaaaaa-taattaatattgcattgaaaagtgaaatgagt 3719000  T
Q  101 caattatttt 110  Q
    || |||||||    
T  3719001 cacttatttt 3719010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 26760171 - 26760098
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    |||||||| |||||||  | ||||| |||||||||| |||||||||||||| ||||| |||||| || ||||||    
T  26760171 ttaattagtgttataattgaaaaaatgtaattaatattgtattgaaaagtgaaatgaatcaatttttctgggac 26760098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 115
Target Start/End: Original strand, 26924363 - 26924436
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    |||||||| |||||||  | ||||| |||||||||| |||||||||||||| ||||| |||||| || ||||||    
T  26924363 ttaattagtgttataattgaaaaaatgtaattaatattgtattgaaaagtgaaatgaatcaatttttctgggac 26924436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 35622834 - 35622946
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaa-tactgtattgaaaagtggaatgactc 101  Q
    ||||| |||||||||||||||| ||| ||  ||||||| |||||||||||||| ||  |||||||  |||||| || ||||||||| |||| ||||  ||    
T  35622834 aaagtagaatatattgaattggcaattatgaaagtagtattaattagagttat-aattgaaaaaaaaaattaattattgtattgaagagtgaaatgtgtc 35622932  T
Q  102 aattattttgggac 115  Q
    |||| |||||||||    
T  35622933 aatttttttgggac 35622946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 20988535 - 20988623
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaa 89  Q
    ||||||| |||||||||||||||| | || |  || || | ||||||||||||||||  | |||||||||||||||  |||||||||||    
T  20988535 gtaaagtagaatatattgaattgggagtggtgaaaataatattaattagagttataattgaaaaaaagtaattaatgttgtattgaaaa 20988623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 37925301 - 37925389
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagt 91  Q
    ||||| |||||||||||||||  | || |  ||||| | |||||||| |||||||  | |||||||||||||||| |||||||||||||    
T  37925301 aaagtagaatatattgaattgagagtggtgaaagtaatattaattagtgttataattgaaaaaaagtaattaatattgtattgaaaagt 37925389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 10587642 - 10587717
Alignment:
Q  9 gaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtatt 84  Q
    |||||||||||||||  | ||||  ||||||| |||||||| |||||||   ||||||||||||||||| ||||||    
T  10587642 gaatatattgaattgagagtgatgaaagtagtattaattagtgttataattagaaaaaagtaattaatattgtatt 10587717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 30903321 - 30903376
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatg 97  Q
    ||||||||||||||||  |||||||| ||||||||| || ||||||||||| ||||    
T  30903321 ttaattagagttataattggaaaaaaataattaatattgaattgaaaagtgaaatg 30903376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 705402 - 705516
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||  ||||||||||||||  | || |  ||||| | |||||||||||||||   |||||||| ||||||||| | |||||||||||| |||   |    
T  705402 gtaaagtataatatattgaattgagagtggtaaaagtaatattaattagagttatatttggaaaaaaataattaatattatattgaaaagtgaaatagat 705501  T
Q  101 caattattttgggac 115  Q
    ||||| |||||||||    
T  705502 caattcttttgggac 705516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 27143290 - 27143336
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaa 88  Q
    ||||||||||||||||  |||||||||||||||||  ||||||||||    
T  27143290 ttaattagagttataattggaaaaaagtaattaatcttgtattgaaa 27143336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 31798432 - 31798382
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtg 92  Q
    |||||||| |||||||  |||||||||||||||||| | ||||||||||||    
T  31798432 ttaattagtgttataattggaaaaaagtaattaatattatattgaaaagtg 31798382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 35705259 - 35705329
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgg 112  Q
    ||||||||||||||||   ||||||||||||||| | || |||||||| || ||| | |||||||||||||    
T  35705259 ttaattagagttataattagaaaaaagtaattaacattgcattgaaaaatgaaataagtcaattattttgg 35705329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 42309475 - 42309397
Alignment:
Q  13 atattgaattggaaatgatttaagtagtgttaattagagttataaa-gggaaaaaagtaattaatactgtattgaaaag 90  Q
    ||||| |||| | ||||||  ||||||| |||||||||||||||||    |||||||||||||||| ||||||||||||    
T  42309475 atattaaatttggaatgatgaaagtagtattaattagagttataaataaaaaaaaagtaattaatattgtattgaaaag 42309397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 1859502 - 1859453
Alignment:
Q  61 gaaaaaagtaattaatactgtattgaaaagtggaatgactcaattatttt 110  Q
    ||||||| ||||||||| |||||||||||||| ||||| |||||| ||||    
T  1859502 gaaaaaaataattaatattgtattgaaaagtgaaatgagtcaattttttt 1859453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 33149326 - 33149238
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtg 92  Q
    ||||| |||||||||||||||  | ||||  ||||||| |||||||| ||||| |  | |||||||||||||||| || |||||||||||    
T  33149326 aaagtagaatatattgaattgagagtgatgaaagtagtattaattagtgttattattg-aaaaaagtaattaatattgcattgaaaagtg 33149238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 37541166 - 37541261
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtag--tgttaattagagttataaagggaaaaa--agtaattaatactgtattgaaaagtg 92  Q
    ||||||| |||||||||||||||||| || |  ||||||  | |||||||  |||||||  |||||||  ||||||||||| ||||||||||||||    
T  37541166 gtaaagtagaatatattgaattggaagtggtgaaagtagtatattaattaatgttataattggaaaaagtagtaattaatattgtattgaaaagtg 37541261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 52146741 - 52146822
Alignment:
Q  34 aagtagtgttaattagagttataa-----agggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattatttt 110  Q
    ||||||| ||||||||||||||||     ||  |||||||||||||||| |||||||||||||  ||||| |||||| ||||    
T  52146741 aagtagtattaattagagttataattgaaagaaaaaaaagtaattaatattgtattgaaaagttaaatgagtcaattttttt 52146822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5563069 - 5563025
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaa 45  Q
    ||||||||||| |||||||||||||||||||  ||||||| ||||    
T  5563069 gtaaagtggaacatattgaattggaaatgatgaaagtagtattaa 5563025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 25842654 - 25842598
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataa 57  Q
    ||||||| |||||||||| ||||  ||||||  ||||||||||||||| ||||||||    
T  25842654 gtaaagtagaatatattgcattgagaatgatgaaagtagtgttaattatagttataa 25842598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 51049503 - 51049455
Alignment:
Q  62 aaaaaagtaattaatactgtattgaaaagtggaatgactcaattatttt 110  Q
    |||||||||||||||| |||||| ||||||| |||  ||||||||||||    
T  51049503 aaaaaagtaattaatattgtattaaaaagtgaaatagctcaattatttt 51049455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 7e-31; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 28108427 - 28108539
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaaggg-aaaaaagtaattaatactgtattgaaaagtggaatgac 99  Q
    |||||||||||||||||||||||  ||||||  ||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||||||| |    
T  28108427 gtaaagtggaatatattgaattgagaatgatgaaagtagtattaattagagttataaagggaaaaaaagtaattaatgttgtattgaaaagtggaatggc 28108526  T
Q  100 tcaattattttgg 112  Q
    ||| |||||||||    
T  28108527 tcagttattttgg 28108539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 41436132 - 41436024
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||||||||||||||||||  ||||||  ||||||| ||||||||||||||||| || ||||||||||||||| |||||||||||||| |||||||||    
T  41436132 aaagtggaatatattgaattgagaatgatgaaagtagtattaattagagttataaaagggaaaaagtaattaatattgtattgaaaagtgaaatgactca 41436033  T
Q  103 attattttg 111  Q
     ||||||||    
T  41436032 gttattttg 41436024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 28925900 - 28926010
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||| ||||||||||||||| ||||||  ||  ||| |||||||||||||||||||||||||||||||||||| ||||||||||| || |||| ||    
T  28925900 gtaaagtgaaatatattgaattgggaatgatcaaaacagtattaattagagttataaagggaaaaaagtaattaatattgtattgaaaaatgaaatggct 28925999  T
Q  101 caattattttg 111  Q
    |||||||||||    
T  28926000 caattattttg 28926010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 3100453 - 3100345
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||||||||||||| |||||||| |  |  ||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||    
T  3100453 aaagtggaatatattaaattggaagttgtgaaagtagtattaattagagttacaaagggaaaaaagtaattaatattgtattgaaaagtgaaatgactca 3100354  T
Q  103 attattttg 111  Q
     ||||||||    
T  3100353 gttattttg 3100345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 15859396 - 15859500
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||| ||||||||||||| ||| |  |  ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  15859396 aaagtgaaatatattgaattagaagttgtgaaagtaatgttaattagagttataaagggaaaaaagtaattaatattgtattgaaaagtgaaatgactca 15859495  T
Q  103 attat 107  Q
    |||||    
T  15859496 attat 15859500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 43077778 - 43077891
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||| |||||||||||||| |||||||  ||||| | ||||||||||||||||| |||||||| ||||||||| |||||||||||||| |||||||    
T  43077778 gtaaagtgaaatatattgaattgaaaatgatgaaagtaatattaattagagttataaaaggaaaaaa-taattaatattgtattgaaaagtgaaatgact 43077876  T
Q  101 caattattttgggac 115  Q
    |  ||||||||||||    
T  43077877 ccgttattttgggac 43077891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 7650029 - 7650136
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||||||||||||||||||| |||||||  |  |||| ||||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||| |||    
T  7650029 aaagtggaatatattgaattgaaaatgatgaagatagtattaattagagttataaaaggaaaaaagtaattaatattgtatttaaaagtgaaatgattca 7650128  T
Q  103 attatttt 110  Q
     |||||||    
T  7650129 gttatttt 7650136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 30757620 - 30757711
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtg 92  Q
    ||||| |||||||||||||||||| ||||||  ||||||| ||||||||||||||||| | |||||||||||||||| ||||||||||||||    
T  30757620 gtaaattggaatatattgaattgggaatgatgaaagtagtattaattagagttataaaagaaaaaaagtaattaatattgtattgaaaagtg 30757711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 7213530 - 7213416
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||||||||||||||||||  | |  |  ||||||| ||||||||||||||||| || ||||||||||||||| |||||||||||||| ||||| |    
T  7213530 gtaaagtggaatatattgaattgagagttgtgaaagtagtattaattagagttataaaagggaaaaagtaattaatattgtattgaaaagtgaaatgatt 7213431  T
Q  101 caattattttgggac 115  Q
     ||||||||||||||    
T  7213430 taattattttgggac 7213416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 33751483 - 33751402
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    ||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||| ||||||| ||||    
T  33751483 aagtagtattaattagagttataaagggaaaaaagtaattaatgatgtattgaaaagtgaaatgactcatttatttttggac 33751402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 33880213 - 33880106
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||| |||||||||||||||| | || |  ||||| | ||||||||||||||||||||||||| |||||||||| |||||| ||||||| |||||||    
T  33880213 gtaaagtagaatatattgaattgggagtggtgaaagtaatattaattagagttataaagggaaaaa-gtaattaatattgtattaaaaagtgaaatgact 33880115  T
Q  101 caattattt 109  Q
    |||||||||    
T  33880114 caattattt 33880106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 42881338 - 42881439
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattt 109  Q
    ||||||||||||||||| ||||   |||||| |||| ||||||| |||| |||||||||||||||||| |||||||||||||| ||||| ||| ||||||    
T  42881338 aatatattgaattggaagtgatgagagtagtattaagtagagttgtaaaaggaaaaaagtaattaatattgtattgaaaagtgaaatgattcagttattt 42881437  T
Q  110 tg 111  Q
    ||    
T  42881438 tg 42881439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 5212012 - 5212124
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||||||||||||||||||| || |  |  ||||||| ||||||| | ||||||||| |||||||||||||||| |||||||||||||| ||| |||||    
T  5212012 aaagtggaatatattgaattgaaagttgtgaaagtagtattaattaaatttataaaggaaaaaaagtaattaatattgtattgaaaagtgaaataactca 5212111  T
Q  103 attattttgggac 115  Q
     ||||||| ||||    
T  5212112 gttattttaggac 5212124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 115
Target Start/End: Complemental strand, 40965091 - 40964994
Alignment:
Q  17 tgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    ||||||| |||||||  ||||| | |||||||||||||||||||||||||||||||||||| ||||||||||| |  ||| ||||| ||||||||||||    
T  40965091 tgaattgaaaatgatgaaagtaatattaattagagttataaagggaaaaaagtaattaatattgtattgaaaaat-aaataactcagttattttgggac 40964994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 9724902 - 9724822
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    ||||||| ||||||||||||||||||  |||||||||||||||| |||||||||||||| |||| ||||||| |||||||||    
T  9724902 aagtagtattaattagagttataaaga-aaaaaagtaattaatattgtattgaaaagtgaaatggctcaatttttttgggac 9724822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 28527019 - 28526910
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    |||||||||| ||||||||||||||| |  |  ||||| | ||||||| |||||||||| ||||||||||||||||| | |||||||||||| ||||| |    
T  28527019 gtaaagtggactatattgaattggaagttgtgaaagtaatattaattatagttataaagagaaaaaagtaattaatattatattgaaaagtgaaatgatt 28526920  T
Q  101 caattatttt 110  Q
    || |||||||    
T  28526919 cagttatttt 28526910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 14136786 - 14136711
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattt 109  Q
    ||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||  |||| ||| ||||||    
T  14136786 aagtagtgttaattagagttataattggaaaaaagtaattaatattgtattgaaaagtgacatgagtcagttattt 14136711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 28572254 - 28572152
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattt 109  Q
    ||||||||||||||||| |  |  ||||||| ||||||| |||||||||| ||||   |||||||||| |||||||||||||| ||||||||| ||||||    
T  28572254 aatatattgaattggaagttgtgaaagtagtattaattacagttataaagagaaa---gtaattaatattgtattgaaaagtgaaatgactcagttattt 28572158  T
Q  110 tgggac 115  Q
    ||||||    
T  28572157 tgggac 28572152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 37247938 - 37248049
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||| ||||||||||||||    ||||  ||||| | |||||||||||||||||||||||||| |||||||   |||||||||||||| || ||||||    
T  37247938 aaagtgaaatatattgaattgagtgtgatgaaagtaatattaattagagttataaagggaaaaaattaattaaatatgtattgaaaagtgaaacgactca 37248037  T
Q  103 attattttggga 114  Q
     |||||||||||    
T  37248038 cttattttggga 37248049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 4794626 - 4794529
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaaggg---aaaaaagtaattaatactgtattgaaaagtggaatg 97  Q
    ||||||||||||||||||||| || ||||  ||||||| ||||||||||||||||  ||   |||||| ||||||||| |||||||||||||| ||||    
T  4794626 aaagtggaatatattgaattgaaagtgatgaaagtagtattaattagagttataattggagaaaaaaattaattaatattgtattgaaaagtgaaatg 4794529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 8031787 - 8031708
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaa 89  Q
    ||||||||||||||  ||||||  ||||||| ||||||| |||||||||||  ||||||||||||||| |||||||||||    
T  8031787 aatatattgaattgtgaatgataaaagtagtattaattaaagttataaaggagaaaaagtaattaatattgtattgaaaa 8031708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 44534537 - 44534649
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaaggga----aaaaagtaattaatactgtattgaaaagtggaatga 98  Q
    ||||||||||||||||||||||||    |  || |||| ||||||||||||||||| | |    ||||||||||||||| |||||||||||||| |||||    
T  44534537 aaagtggaatatattgaattggaagctgtgaaattagtattaattagagttataaaagaaaaagaaaaagtaattaatattgtattgaaaagtgaaatga 44534636  T
Q  99 ctcaattattttg 111  Q
    |||| ||||||||    
T  44534637 ctcagttattttg 44534649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 3123657 - 3123588
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttg 111  Q
    ||||||||||||||||||| |||| | ||||||||| ||||||| |||||| ||||||||| ||||||||    
T  3123657 ttaattagagttataaaggaaaaataataattaatattgtattggaaagtgaaatgactcagttattttg 3123588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 5425904 - 5425815
Alignment:
Q  9 gaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatga 98  Q
    |||||||||||||||| ||||||  || |||| ||| ||||| ||||||  |||||||||| ||||||| |||||||||||||| |||||    
T  5425904 gaatatattgaattgggaatgatgaaattagtattagttagatttataattggaaaaaagttattaatattgtattgaaaagtgaaatga 5425815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 24775860 - 24775968
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaat-actgtattgaaaagtggaatgac 99  Q
    |||||||| |||||||||||||  |||||||  ||||||| ||||| ||||||||||| |||||||| | |||||| | | ||||||||||||  |||||    
T  24775860 gtaaagtgaaatatattgaattaaaaatgatgaaagtagtattaatcagagttataaa-ggaaaaaaatgattaataattatattgaaaagtgatatgac 24775958  T
Q  100 tcaattattt 109  Q
    ||||||||||    
T  24775959 tcaattattt 24775968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 31348558 - 31348478
Alignment:
Q  9 gaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaa 89  Q
    |||||||||||||| | |||| |  ||||||| |||||||| |||||||  |||||||||||||||||| |||||||||||    
T  31348558 gaatatattgaattaggaatggtgaaagtagtattaattagtgttataattggaaaaaagtaattaatattgtattgaaaa 31348478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 37529123 - 37529214
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtg 92  Q
    ||||||| ||||| |||||||||||| || |  ||||| | ||||||||||||||||  | |||||||||||||||| ||||||| ||||||    
T  37529123 gtaaagtagaataaattgaattggaagtggtgaaagtaatattaattagagttataattgaaaaaaagtaattaatattgtattggaaagtg 37529214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 3199944 - 3199838
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataa-----agggaaaaaagtaattaatactgtattgaaaagtggaatgactcaat 104  Q
    ||||||||||||||| | || |  ||||||| ||||||||||||||||     ||  |||||||||||||||| |||||||||||||| ||||| |||||    
T  3199944 aatatattgaattgggagtggtgaaagtagtattaattagagttataattagaagaaaaaaaagtaattaatattgtattgaaaagtgcaatgagtcaat 3199845  T
Q  105 tattttg 111  Q
    | |||||    
T  3199844 ttttttg 3199838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 10818635 - 10818565
Alignment:
Q  42 ttaattagagttataaagggaaaaaa-gtaattaatactgtattgaaaagtggaatgactcaattattttg 111  Q
    |||||||||||||||||||||||||| |||||||||| | |||| |||| || ||||||||| ||||||||    
T  10818635 ttaattagagttataaagggaaaaaaagtaattaatattatattaaaaaatgaaatgactcagttattttg 10818565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 28301487 - 28301384
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    |||||| ||||||||||||||  | ||||  ||||||| ||||||||||||||||| ||||||    |||||||| | |||| ||||||| |||||||||    
T  28301487 aaagtgaaatatattgaattgagagtgatgaaagtagtattaattagagttataaaaggaaaa----aattaataatatattaaaaagtgaaatgactca 28301392  T
Q  103 attatttt 110  Q
     |||||||    
T  28301391 tttatttt 28301384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 44194663 - 44194598
Alignment:
Q  44 aattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattatttt 110  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||||| ||||| ||| |||||||    
T  44194663 aattagagttataaaaggaaaaaa-taattaatattgtattgaaaagtgaaatgattcagttatttt 44194598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 18181267 - 18181380
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataa-agggaaaaaagtaattaatactgtattgaaaagtggaatgactc 101  Q
    ||||| |||||| ||||||||| ||| ||  ||||||| ||||||||||||||||   | |||||| ||||||||| |||||||||||||| ||||  ||    
T  18181267 aaagtagaatattttgaattgggaataatgaaagtagtattaattagagttataattagaaaaaaaataattaatattgtattgaaaagtgaaatgggtc 18181366  T
Q  102 aattattttgggac 115  Q
    | ||||||| ||||    
T  18181367 agttattttaggac 18181380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 19009892 - 19009791
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaa-gtaattaatactgtattgaaaagtggaatgactcaattatt 108  Q
    |||||||||| |||| ||||||  |||| || |||| |||||||||||| | |||||| |||||||||| |||||||||||||| |||   |||||||||    
T  19009892 aatatattgagttgggaatgataaaagtggtattaagtagagttataaatgaaaaaaaagtaattaatattgtattgaaaagtgaaattgatcaattatt 19009793  T
Q  109 tt 110  Q
    ||    
T  19009792 tt 19009791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 1908546 - 1908634
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaa 89  Q
    ||||||| |||||||||||||||||| || |  || || | ||||||||||||||||  | |||||||||||||||  |||||||||||    
T  1908546 gtaaagtagaatatattgaattggaagtggtgaaaataatattaattagagttataattgaaaaaaagtaattaatgttgtattgaaaa 1908634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 24356166 - 24356070
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatg 97  Q
    ||||||| |||||| ||||||||| | |  |  ||||||| ||||||||||||||||  | |||||||||||||||  |||||||||||||| ||||    
T  24356166 gtaaagtagaatatgttgaattgggagtcgtgaaagtagtattaattagagttataattgaaaaaaagtaattaatgttgtattgaaaagtgaaatg 24356070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 31592603 - 31592492
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||| |||||||||||||||  | ||||  || || | ||||||| ||||||||  ||||||| ||||||| || |||||||||||||| ||||| |||    
T  31592603 aaagtagaatatattgaattgagagtgatgaaaataatattaattaaagttataattggaaaaa-gtaattattattgtattgaaaagtgaaatgagtca 31592505  T
Q  103 attattttgggac 115  Q
    ||| |||||||||    
T  31592504 atttttttgggac 31592492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 36103543 - 36103610
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattatttt 110  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||||| ||| |||| |||| |||||||    
T  36103543 ttaattagagtcataaaggggaaaaagtaattaatattgtattgaaaggtgaaatg-ctcagttatttt 36103610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 7931581 - 7931644
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatg 97  Q
    ||||||| ||||||||||||||||  | |||||||||||||||  |||||||||||||| ||||    
T  7931581 aagtagtattaattagagttataattgaaaaaaagtaattaatgttgtattgaaaagtgaaatg 7931644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 13222114 - 13222027
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatg 97  Q
    ||||||||||||||||| || |  ||||| | |||||||| |||||||  | |||||| ||||||||| |||||||||||||| ||||    
T  13222114 aatatattgaattggaagtggtgaaagtaatattaattagtgttataattgaaaaaaaataattaatattgtattgaaaagtgaaatg 13222027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 435130 - 435227
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagtta------taaagggaaaaaagtaattaatactgtattgaaaagtg 92  Q
    |||||||| ||||||||||||||  ||||||  ||||||| ||||||| |||||      |||||||||| || ||||||||| ||||||||||||||    
T  435130 gtaaagtgaaatatattgaattgagaatgatgaaagtagtattaattaaagttattgttataaagggaaagaaataattaatattgtattgaaaagtg 435227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 10069639 - 10069733
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatg 97  Q
    ||||| |||||||||||||||  | ||||  ||||| | |||||||||||||| |  | |||||||||||||||| || ||||||||||| ||||    
T  10069639 aaagtcgaatatattgaattgagagtgatgaaagtattattaattagagttatcattgtaaaaaagtaattaatattgcattgaaaagtgaaatg 10069733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 13375591 - 13375636
Alignment:
Q  66 aagtaattaatactgtattgaaaagtggaatgactcaattattttg 111  Q
    |||||||||||| |||||||||||||| ||||||||| ||||||||    
T  13375591 aagtaattaatattgtattgaaaagtgaaatgactcagttattttg 13375636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 115
Target Start/End: Original strand, 14284367 - 14284439
Alignment:
Q  42 ttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgggac 115  Q
    ||||||| ||| || ||||||||||| ||||||||| ||||||||||| |  ||||||||| ||||||||||||    
T  14284367 ttaattacagtcatgaagggaaaaaa-taattaatattgtattgaaaaataaaatgactcagttattttgggac 14284439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 38873017 - 38873082
Alignment:
Q  46 ttagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttg 111  Q
    ||||||||||||  |||||||||||||||||| |||||| |||| || ||||| |||||| |||||    
T  38873017 ttagagttataatcggaaaaaagtaattaatattgtattaaaaaatgaaatgagtcaatttttttg 38873082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 2756729 - 2756673
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataa 57  Q
    ||||||| ||||||||| |||||||| |||| ||| |||| ||||||||||||||||    
T  2756729 gtaaagtagaatatattaaattggaagtgatgtaaatagtattaattagagttataa 2756673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 7648918 - 7648993
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaata 77  Q
    |||| ||| ||||||||||||||| | ||||  || |||| ||||||||| |||||||||| |||||||||||||||    
T  7648918 gtaatgtgaaatatattgaattgggagtgatgaaaatagtattaattagaattataaaggg-aaaaagtaattaata 7648993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 8385121 - 8385022
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattt 109  Q
    ||||||||||| || |||||||  ||||||   |||||| ||||||||  | ||||| |||||||||| |||||||||||||| ||| | ||||||||||    
T  8385121 aatatattgaactgaaaatgatgaaagtagaaataattaaagttataattg-aaaaatgtaattaatattgtattgaaaagtgaaataagtcaattattt 8385023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 23685012 - 23684925
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagt 91  Q
    |||||| ||||||||||||||  | ||||  ||||||| |||||||||||||||||   | |||| ||||||||| |||||||||||||    
T  23685012 aaagtgaaatatattgaattgagagtgatgaaagtagtattaattagagttataaa-aaagaaaaataattaataatgtattgaaaagt 23684925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 31546103 - 31546167
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatga 98  Q
    ||||||| || |||||||||||||  | |||||||||||||||| |||||| ||||||| |||||    
T  31546103 aagtagtattgattagagttataattgaaaaaaagtaattaatattgtatttaaaagtgaaatga 31546167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 44736768 - 44736700
Alignment:
Q  7 tggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaa 75  Q
    ||||||||||||||| |  | ||||  ||||||| ||||||||||||||||  ||||||||||||||||    
T  44736768 tggaatatattgaatcgagagtgataaaagtagtattaattagagttataattggaaaaaagtaattaa 44736700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 19515927 - 19515848
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaa 89  Q
    |||||||||||||| || | ||  ||||||| ||||||||||||||||  || ||||||||||| ||| |||| ||||||    
T  19515927 aatatattgaattgtaagtaatgaaagtagtattaattagagttataattggtaaaaagtaattgatattgtactgaaaa 19515848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 43182320 - 43182241
Alignment:
Q  10 aatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaa 89  Q
    ||||||||||||||||| || |  || |||| ||||||| ||||||||  | |||||||||||||||  |||||||||||    
T  43182320 aatatattgaattggaagtggtgaaaatagtattaattaaagttataattgaaaaaaagtaattaatgttgtattgaaaa 43182241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 44284372 - 44284459
Alignment:
Q  2 taaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaa 89  Q
    |||||||||| ||||| ||||| || ||||  ||||| | ||||||||||||||||| | || ||| ||||||||| || ||||||||    
T  44284372 taaagtggaaaatattaaattgaaagtgatgaaagtattattaattagagttataaatgaaataaaataattaatattgcattgaaaa 44284459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 5007627 - 5007685
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtg 92  Q
    ||||||| ||||||||||||||||  | ||||| |||||||||| || |||||||||||    
T  5007627 aagtagtattaattagagttataattgaaaaaaggtaattaatattgcattgaaaagtg 5007685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 24451831 - 24451725
Alignment:
Q  9 gaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaag-taattaatactgtattgaaaagtggaatgactcaattat 107  Q
    |||||||||| |||||||  | |  ||||| | ||||||||||||||||  | ||||||  ||||||||| ||||||| |||||| ||||||| | ||||    
T  24451831 gaatatattgtattggaaggggtgaaagtaatattaattagagttataattgaaaaaaaaataattaatattgtattggaaagtgaaatgacttagttat 24451732  T
Q  108 tttggga 114  Q
    |||||||    
T  24451731 tttggga 24451725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 39095684 - 39095599
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaa 89  Q
    |||||||||||||||||||||  | ||||  ||||| | ||||||| |||||| ||  ||||||||||||||||| |||||| ||||    
T  39095684 aaagtggaatatattgaattgtcagtgatgaaagtaatattaattaaagttat-aattgaaaaaagtaattaatattgtatttaaaa 39095599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 44424317 - 44424371
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataa 57  Q
    ||||| |||||||||||||||  ||||||  ||||||| ||||||||||||||||    
T  44424317 aaagttgaatatattgaattgagaatgatgaaagtagtattaattagagttataa 44424371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 6075551 - 6075487
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaa 67  Q
    ||||| ||||||||| |||||| | ||||  ||||||| ||||||||||||||||  ||||||||    
T  6075551 aaagtagaatatattaaattgggagtgatgaaagtagtattaattagagttataattggaaaaaa 6075487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 9472469 - 9472381
Alignment:
Q  9 gaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatg 97  Q
    |||||||||||||||  | || |  ||||||| ||||||| ||||||||  | |||||||| ||||||  |||||||||||||| ||||    
T  9472469 gaatatattgaattgatagtggtgaaagtagtattaattatagttataattgaaaaaaagtgattaatgttgtattgaaaagtgaaatg 9472381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 394831 - 394723
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||||||||||| |||||||  | ||||  ||||||| |||||||||||||||||||||||||||||||||||  ||||||||| ||| ||||||||||    
T  394831 aaagtggaatatagtgaattgagagtgatgaaagtagtattaattagagttataaagggaaaaaagtaattaatgatgtattgaagagt-gaatgactca 394733  T
Q  103 attattttgg 112  Q
     |||||||||    
T  394732 cttattttgg 394723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 14511 - 14435
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaata 77  Q
    ||||||||||||||||||||||| |||||||  ||||||| ||||||||||||||||| ||||||||||||||||||    
T  14511 gtaaagtggaatatattgaattgaaaatgatgaaagtagtattaattagagttataaaaggaaaaaagtaattaata 14435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 26377 - 26301
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaata 77  Q
    |||||||||||||||||||||||||||||||  ||||| | ||||||||||||||||| ||||||||||||||||||    
T  26377 gtaaagtggaatatattgaattggaaatgataaaagtaatattaattagagttataaaaggaaaaaagtaattaata 26301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 9634 - 9714
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttggga 114  Q
    ||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||| ||| ||||  |||||||||||    
T  9634 aagtagtattaattagagttataaagggaaaatagtaattaatattgtattgaaaagtgaaattactctgttattttggga 9714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 230305 - 230202
Alignment:
Q  7 tggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaatta 106  Q
    |||||||||||||||||||| |  |  ||||| | ||||||||||||||||| | |||||| ||||||||| |||||||||||||| ||||||||| |||    
T  230305 tggaatatattgaattggaagttgtgaaagtaatattaattagagttataaaagaaaaaaa-taattaatattgtattgaaaagtgaaatgactcagtta 230207  T
Q  107 ttttg 111  Q
    |||||    
T  230206 ttttg 230202  T

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Target: scaffold0007; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 158050 - 157973
Alignment:
Q  33 taagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattatttt 110  Q
    |||||| | ||||||||||||||||  | |||||| ||||||||| |||||||||||||| ||||  |||||| ||||    
T  158050 taagtaatattaattagagttataattgaaaaaaaataattaatattgtattgaaaagtgaaatgggtcaattttttt 157973  T

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Target: scaffold0006 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 229876 - 229765
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactca 102  Q
    ||||||| |||||||||||||||| |  |  ||||||| |||||||||||||||||||| ||||| ||||||||| ||||||| |||||| ||| ||||     
T  229876 aaagtggtatatattgaattggaagttgtgaaagtagtattaattagagttataaaggggaaaaaataattaatattgtattg-aaagtgaaataactct 229778  T
Q  103 attattttgggac 115  Q
     ||||||||||||    
T  229777 gttattttgggac 229765  T

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Target: scaffold0221 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 8940 - 8869
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaatta 74  Q
    |||||||||||||||||||||  ||||||  ||||| | ||||||||||||||||||| |||| | ||||||    
T  8940 aaagtggaatatattgaattgagaatgatgaaagtaatattaattagagttataaaggaaaaataataatta 8869  T

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Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 98879 - 98805
Alignment:
Q  2 taaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaata 77  Q
    ||||||||||||||||||||||  | ||||  || || | ||||||||||||||||||||| ||||||||||||||    
T  98879 taaagtggaatatattgaattgagagtgatgaaaataatattaattagagttataaaggga-aaaagtaattaata 98805  T

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Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 26666 - 26550
Alignment:
Q  3 aaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaa-agtaa----ttaatactgtattgaaaagtggaatg 97  Q
    |||||||||||||||||||||  | ||||  ||||||| ||||||||| ||||||| ||||||| | |||    || ||  |||||||||||||| ||||    
T  26666 aaagtggaatatattgaattgcgagtgatgaaagtagtattaattagaattataaatggaaaaataataaaaagttgatgatgtattgaaaagtgaaatg 26567  T
Q  98 actcaattattttggga 114  Q
    ||||| |||||||||||    
T  26566 actcatttattttggga 26550  T

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Target: scaffold0086 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 5873 - 5765
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||| |||||||||||||||  | || |  ||||||| ||||||| ||||||||| |||||||| ||||||||| | ||||||||| |  ||| | |    
T  5873 gtaaagtagaatatattgaattgagagtggtgaaagtagtattaattaaagttataaatggaaaaaa-taattaatattttattgaaaaataaaataatt 5775  T
Q  101 caattatttt 110  Q
    ||||||||||    
T  5774 caattatttt 5765  T

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Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 171281 - 171169
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgact 100  Q
    ||||||| |||||||||||||| | | ||||  ||||| | |||||  |||||||||  | |||||||||||||||| | ||||||||||| |||||  |    
T  171281 gtaaagtagaatatattgaattaggagtgatgaaagtaatattaatatgagttataattgaaaaaaagtaattaatattatattgaaaagt-gaatggat 171183  T
Q  101 caattattttggga 114  Q
    || |||||||||||    
T  171182 cagttattttggga 171169  T

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Target: scaffold0155 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 8006 - 8097
Alignment:
Q  1 gtaaagtggaatatattgaattggaaatgatttaagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtg 92  Q
    |||||||  ||||||||||||||  |||  |  ||||||| ||||||| ||||||||  || ||||||||||| ||| ||||||||||||||    
T  8006 gtaaagtaaaatatattgaattgagaattgtgaaagtagtattaattaaagttataattgggaaaaagtaattgatattgtattgaaaagtg 8097  T

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Target: scaffold0578 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 4051 - 3993
Alignment:
Q  34 aagtagtgttaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtg 92  Q
    ||||||| ||||||||||||||||  | ||||| |||||||||| || |||||||||||    
T  4051 aagtagtattaattagagttataattgaaaaaaggtaattaatattgcattgaaaagtg 3993  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 220008 - 219947
Alignment:
Q  51 gttataaagggaaaaaagtaattaatactgtattgaaaagtggaatgactcaattattttgg 112  Q
    |||||||  |||||||||||| |||||||||||||||||||  ||||  |||||| ||||||    
T  220008 gttataattggaaaaaagtaaataatactgtattgaaaagtaaaatgtgtcaatttttttgg 219947  T

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