View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13258_high_8 (Length: 282)
Name: NF13258_high_8
Description: NF13258
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13258_high_8 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 21 - 282
Target Start/End: Original strand, 7308793 - 7309055
Alignment:
| Q |
21 |
ttgagaattcgaaaagaaaataataatataaaagagcatctaatcgtccaaaggaattcagatttccttattcggaaaaatctcgcaataaccatgtcat |
120 |
Q |
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| T |
7308793 |
ttgagaattcgaaaagaaaataataatataaaagagcatctaatagtccaaaggaattcagatttccttattcggaaaaatctcgcaatcaccatgtcat |
7308892 |
T |
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| Q |
121 |
taactatcggatcaagattgaacg-tgtagatttcaacgtcgagtcgagatgttggtgtttaaggaaatcaaataaaaactttgtttgaaatcttcattc |
219 |
Q |
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| T |
7308893 |
taactatcggatcaagattgaacggtgtagatttcaacgtcgagtcgagatgtcagtgtttaaggaaatcaaataaaaactttgcttgaaatcttcattc |
7308992 |
T |
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| Q |
220 |
ttagatcttaatccaacagtcaccaacatatgagtccgtgaatgctggattttagcaacagaa |
282 |
Q |
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| T |
7308993 |
ttagatcttaatccaacagtcaccaacatatgagttcgtgaatgctggattttagcaacagaa |
7309055 |
T |
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