View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13258_low_6 (Length: 316)
Name: NF13258_low_6
Description: NF13258
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13258_low_6 |
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Alignment Details
Target: chr2 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 11 - 299
Target Start/End: Original strand, 1552832 - 1553120
Alignment:
| Q |
11 |
cacagacacatcttacttcattaaattggtttttgtttgcatttgcttgtgtttatctacctaaattaacatcaacaatagcaaaagatagaaagagcac |
110 |
Q |
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| T |
1552832 |
cacagacacatcttacttcattaaattggtttttgtttgcatttgcttgtgtttatctacctaaattaacatcaacaatagcaaaagatagaaagagcac |
1552931 |
T |
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| Q |
111 |
agtggagtggaacatagtgtccacgtggttggaagccaaatcagctgaggatggaaatccatttcctattggtccaaaatctatccacgatataccttaa |
210 |
Q |
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| T |
1552932 |
agtggagtggaacatagtgtccacgtggttggaagccaaatcagctgaggatggaaatccatttcctattggtccaaaatctatccacgatataccttaa |
1553031 |
T |
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| Q |
211 |
gatttcttgtttagatttcattgtcctacttggccttctatgaaaaccccttcagattctcacacacactcataaaatactctctaact |
299 |
Q |
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| T |
1553032 |
gatttcttgtttagatttcattgtcctacttggccttctatgaaaaccccttcagattctctcacacactcataaaatactctctaact |
1553120 |
T |
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