View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13259_high_22 (Length: 288)
Name: NF13259_high_22
Description: NF13259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13259_high_22 |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 11 - 267
Target Start/End: Complemental strand, 1419102 - 1418840
Alignment:
| Q |
11 |
agatgaacactattaaaggtttatcacaagcatcactg------ggccaactcaacggagtttacttattctttctttattctaataattaatttgaatg |
104 |
Q |
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| T |
1419102 |
agatgaacacatttaaaggttcatcacaagcatcactgtcactggaccaactcatcaaagtttacttattctttctttattctaataattaatttgaatg |
1419003 |
T |
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| Q |
105 |
ttttttaaacatacgtatttacacaaaattacttacttatctctttgtcacataatggtcatcaatttagaggggtttgtataagtaagtgtaggaagta |
204 |
Q |
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| T |
1419002 |
ttttttaaacatacgtatttacacaaaattacttacttatctctttgtcaca-aatggtcatcaatttagaggggtttgtataagtaagtgtaggaagta |
1418904 |
T |
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| Q |
205 |
catat-gggggtataagaaagattttacaaaatccctttcaattgaatataaggatattgccgc |
267 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1418903 |
catatggggggtataagaaagattttacaaaatccctttcaattgaatataaggatattgccgc |
1418840 |
T |
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