View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13259_low_33 (Length: 232)
Name: NF13259_low_33
Description: NF13259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13259_low_33 |
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Alignment Details
Target: chr1 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 49478215 - 49478094
Alignment:
| Q |
21 |
tagggtataggtgaactaatatatttagtagtaa-ccactctcttaaaaactagtgtaactctgatataaggtagctgaactaatatgctagcagtagta |
119 |
Q |
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| T |
49478215 |
tagggtataggtgagctaatatatttagtagtaaaccactctcttaaaaactagtgtaactctgatataaggtagctgaactaatatgctagcagtagta |
49478116 |
T |
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| Q |
120 |
actataagtctgcatgagtagt |
141 |
Q |
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|||||||||||||||||||||| |
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| T |
49478115 |
actataagtctgcatgagtagt |
49478094 |
T |
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