View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13259_low_8 (Length: 519)
Name: NF13259_low_8
Description: NF13259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13259_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 481; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 481; E-Value: 0
Query Start/End: Original strand, 9 - 501
Target Start/End: Complemental strand, 34078091 - 34077599
Alignment:
| Q |
9 |
gaagaaaatgagggaagtagaaaaaagagttgatgactttcactccaaaattcttgaagaacatagaaaggcaaggaaagataagaaagggataggaaaa |
108 |
Q |
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| T |
34078091 |
gaagaaaatgagggaagtagaaaaaagagttgatgactttcactccaaaattcttgaagaacatagaaaggcaaggaaagataagaaagggataggaaaa |
34077992 |
T |
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| Q |
109 |
agtgatgaagaacttgattttgtggatattttattgtctttgcctggtgaagatggaaaagagcatatggatgatgttgagataaaagctttgattcagg |
208 |
Q |
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| T |
34077991 |
agtgatgaagaacttgattttgtggatattttattgtctttgcctggtgaagatggaaaagagcatatggatgatgttgagataaaagctttgattcagg |
34077892 |
T |
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| Q |
209 |
tatgactttttctctattaattttgtttaatttttcatgtaatgattgaaaataatgtagttatactaaatatttaggacatgatcgcggctgcaacgga |
308 |
Q |
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| T |
34077891 |
tatgactttttctctattaattttgtttaatttttcatgtaatgattgaaaataatgtagttatactaaatatttaggacatgatcgcggctgcaacaga |
34077792 |
T |
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| Q |
309 |
cacttcagccgttactaatgaatgggcgatgacagaggtaatcaaacatccacacgtccttcacaaaatccaagaagagcttgatgtagtggttggccct |
408 |
Q |
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| T |
34077791 |
cacttcagccgttactaatgaatgggcgatgacagaggtaatcaaacatccacacgttcttcacaaaatccaagaagagcttgatgtagtggttggccct |
34077692 |
T |
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| Q |
409 |
aatagaatggtgattgaatctgatttgcctaaccttaattacctacgatgtgttgtacgtgaaactttccgcatgcacccagcagggccattc |
501 |
Q |
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| T |
34077691 |
aatagaatggtgattgaatctgatttgcctaaccttaattacctacgatgtgttgtacgtgaaactttccgcatgcatccagcagggccattc |
34077599 |
T |
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