View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1325_high_3 (Length: 267)
Name: NF1325_high_3
Description: NF1325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1325_high_3 |
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Alignment Details
Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 71 - 235
Target Start/End: Original strand, 28594709 - 28594873
Alignment:
| Q |
71 |
gcatcaaaaggatttggctatataaactagcgaaagagaaaagcttttacacgttttcaaataaggaagattttaatattattttataccataatcgaan |
170 |
Q |
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| T |
28594709 |
gcatcaaaaggatttgactatataaactagcgaaagagaaaagcttttacacgttttcaaataaggaagattttaatattattttataccataatcgatt |
28594808 |
T |
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| Q |
171 |
nnnnnnnatatcagacaaagtatcataatattttgagtgaaattaatctatatcttcaacgtgat |
235 |
Q |
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||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |
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| T |
28594809 |
tttttttatatcagacaaagtatcataatattttgagtaaaattaatccatatcttcaacgtgat |
28594873 |
T |
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