View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1326-Insertion-28 (Length: 372)
Name: NF1326-Insertion-28
Description: NF1326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1326-Insertion-28 |
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Alignment Details
Target: chr5 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 8 - 344
Target Start/End: Complemental strand, 9637294 - 9636968
Alignment:
| Q |
8 |
tgaacaatcgcttcaaattgtgtgaatttgaacagtttccaaagatgtaaaaccagaggaggtttcaagtgatgaaatcctcctatactgtaaattttaa |
107 |
Q |
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| T |
9637294 |
tgaacaatcgcttcaaattgtgtgaatttgaacagtttccaaagatgtaaaaccagaggaggtttcaagtgatgaaatcctcctatactgtaaattttaa |
9637195 |
T |
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| Q |
108 |
actgacggccattattttctagtccaatgcaaaccaacttattaatggttcattcatgtcattgtcaagcattatgagtagttactttaattaatgtatt |
207 |
Q |
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| T |
9637194 |
actgacgg-----------tagtccaatgcaaaccaacttattaatggttcattcatgtcattgtcaagcattacgagtggttactttaattaatgtatt |
9637106 |
T |
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| Q |
208 |
ccaatataaaaacggtttattattgtttattccaaaatcaagctgtttcaagcatttgaccaaaataatctcatttgaccaaaataatccctagattatt |
307 |
Q |
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| T |
9637105 |
ccaatataaaaacggtttattattgtttatttcaaaatcaagctgtttcaagcatttgaccaaaataatctcatttgaccaaaataatccctagattatt |
9637006 |
T |
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| Q |
308 |
aaaatgtgtc-aaatatgtactataagtttacaaaata |
344 |
Q |
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| T |
9637005 |
aaaatgtgtcaaaatatgtactataagtttagaaaata |
9636968 |
T |
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