View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1326-Insertion-29 (Length: 72)
Name: NF1326-Insertion-29
Description: NF1326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1326-Insertion-29 |
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| [»] chr3 (1 HSPs) |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 66; Significance: 7e-30; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 66; E-Value: 7e-30
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 34431800 - 34431865
Alignment:
| Q |
7 |
acaaagcatgttttaaaccaggactaaataaccaatcatgaacatcccaatatacctcaactctca |
72 |
Q |
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| T |
34431800 |
acaaagcatgttttaaaccaggactaaataaccaatcatgaacatcccaatatacctcaactctca |
34431865 |
T |
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Target: chr4 (Bit Score: 50; Significance: 2e-20; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-20
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 43402757 - 43402822
Alignment:
| Q |
7 |
acaaagcatgttttaaaccaggactaaataaccaatcatgaacatcccaatatacctcaactctca |
72 |
Q |
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| T |
43402757 |
acaaagcatgtttcaaaccaggactaaataaccaatcatgaacatcccaataaacttcaattctca |
43402822 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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