View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13260_high_25 (Length: 306)
Name: NF13260_high_25
Description: NF13260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13260_high_25 |
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Alignment Details
Target: chr5 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 38 - 290
Target Start/End: Complemental strand, 40038484 - 40038232
Alignment:
| Q |
38 |
attgatatcaactcaattgaatatttggatccattaaaatacttaagaatgagaaatgaaaaggataaattttcattaaaaatttaactcttcctaatta |
137 |
Q |
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| T |
40038484 |
attgatatcaactcaattgaatatttggatccattaaaatacttaagaatgagaaatgaaaaggataaattttcattaaaaatttaactctgcctaatta |
40038385 |
T |
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| Q |
138 |
gactaaaaacaacttacagaaaaatgaataatattttgtaaatcaagttattctctcatgcagatctagagacactaatctctcaaaataacacaactct |
237 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40038384 |
gactaaaaacaacttacagaaaaatgaagaatattttgtaaatcaagttattcactcatgcagatctagagacactaatctctcaaaataacacaactct |
40038285 |
T |
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| Q |
238 |
agtatttttccatgcacaattgttagaaattgaactcctaacctgataattaa |
290 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40038284 |
agtatttttccatgcacaattgttagaaattgaactcctaacctgataattaa |
40038232 |
T |
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