View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13260_high_28 (Length: 257)
Name: NF13260_high_28
Description: NF13260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13260_high_28 |
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Alignment Details
Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 8 - 242
Target Start/End: Original strand, 7175965 - 7176199
Alignment:
| Q |
8 |
cgaataatattggaatggttaactttgtttagaatttgtatctcttttgaaacatctccttctgtcttcttaatcgcagccaaatcgcctttaataaggc |
107 |
Q |
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| T |
7175965 |
cgaataacattggaatggttaactttgtttagaatttgtatctcttttgaaacatctccttctgtcttcttaatcgcagccaaatcgcctttaataaggc |
7176064 |
T |
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| Q |
108 |
cgcgataaacagttcctttaacccgacaacttggactaaaattatcagttgcaaccttaatttcctcaaaatcatacactttgaaagattgagctatacc |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7176065 |
cgcgataaacagttcctttaacccgacaacttggactaaaattatcagttgcaaccttaatttcctcaaaatcatacactttgaaagattgagctatacc |
7176164 |
T |
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| Q |
208 |
acatataatctcagacaaattttcatcttctttct |
242 |
Q |
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|||||||||||||||||| |||||||||||||||| |
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| T |
7176165 |
acatataatctcagacaatttttcatcttctttct |
7176199 |
T |
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