View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13260_low_11 (Length: 428)

Name: NF13260_low_11
Description: NF13260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13260_low_11
NF13260_low_11
[»] chr6 (20 HSPs)
chr6 (338-410)||(11172881-11172953)
chr6 (342-410)||(1352471-1352539)
chr6 (332-410)||(32142365-32142443)
chr6 (342-410)||(11615352-11615420)
chr6 (342-410)||(17941608-17941676)
chr6 (342-409)||(3787092-3787159)
chr6 (342-409)||(6835712-6835779)
chr6 (339-410)||(9961312-9961383)
chr6 (341-410)||(35040048-35040117)
chr6 (342-410)||(8201460-8201528)
chr6 (342-409)||(2603610-2603677)
chr6 (342-410)||(9461573-9461642)
chr6 (342-410)||(15497841-15497910)
chr6 (341-373)||(32393715-32393747)
chr6 (342-373)||(10364722-10364753)
chr6 (339-373)||(5489572-5489606)
chr6 (338-366)||(6835972-6836000)
chr6 (338-366)||(9660219-9660247)
chr6 (341-373)||(29901193-29901225)
chr6 (319-355)||(31780456-31780492)
[»] chr7 (38 HSPs)
chr7 (336-410)||(44186876-44186950)
chr7 (342-410)||(44480986-44481054)
chr7 (342-410)||(45780863-45780931)
chr7 (342-410)||(46373216-46373284)
chr7 (339-410)||(24685641-24685712)
chr7 (342-410)||(1643719-1643787)
chr7 (342-410)||(4513573-4513641)
chr7 (342-410)||(23059070-23059138)
chr7 (346-410)||(23726589-23726653)
chr7 (342-410)||(40768690-40768758)
chr7 (342-410)||(45823172-45823240)
chr7 (340-410)||(6882838-6882908)
chr7 (340-410)||(35421828-35421898)
chr7 (341-410)||(19866490-19866559)
chr7 (337-410)||(31502803-31502876)
chr7 (340-410)||(47578893-47578962)
chr7 (342-410)||(13439317-13439385)
chr7 (342-410)||(24924385-24924453)
chr7 (342-410)||(44894787-44894855)
chr7 (339-410)||(5680415-5680486)
chr7 (339-410)||(5705467-5705538)
chr7 (342-409)||(22918173-22918240)
chr7 (341-403)||(5528383-5528445)
chr7 (339-373)||(25756338-25756372)
chr7 (342-410)||(9417816-9417884)
chr7 (342-410)||(10453121-10453189)
chr7 (342-373)||(9818084-9818115)
chr7 (342-373)||(10720009-10720040)
chr7 (342-373)||(42688776-42688807)
chr7 (339-373)||(3945126-3945160)
chr7 (336-366)||(40704648-40704678)
chr7 (339-373)||(44452184-44452218)
chr7 (340-373)||(7978991-7979024)
chr7 (339-368)||(43576737-43576766)
chr7 (335-364)||(43576999-43577028)
chr7 (341-373)||(9140592-9140624)
chr7 (382-410)||(33938428-33938456)
chr7 (341-373)||(40353882-40353914)
[»] chr4 (43 HSPs)
chr4 (340-410)||(56038629-56038699)
chr4 (341-410)||(22019089-22019158)
chr4 (337-409)||(25771192-25771264)
chr4 (342-410)||(30088811-30088879)
chr4 (342-410)||(31648547-31648615)
chr4 (338-410)||(42179662-42179734)
chr4 (341-410)||(13880450-13880519)
chr4 (341-410)||(32860832-32860901)
chr4 (342-410)||(4294142-4294210)
chr4 (342-410)||(10555309-10555377)
chr4 (342-410)||(23621638-23621706)
chr4 (336-408)||(35877058-35877130)
chr4 (342-410)||(45250070-45250138)
chr4 (342-410)||(49235972-49236040)
chr4 (342-409)||(34016767-34016834)
chr4 (342-409)||(48380573-48380640)
chr4 (342-409)||(51817158-51817225)
chr4 (337-410)||(25367457-25367530)
chr4 (342-407)||(34447632-34447697)
chr4 (342-410)||(7258122-7258190)
chr4 (338-410)||(10125694-10125766)
chr4 (342-409)||(42507750-42507817)
chr4 (342-409)||(55968541-55968608)
chr4 (342-409)||(55984328-55984395)
chr4 (341-410)||(23222470-23222539)
chr4 (341-410)||(31486853-31486922)
chr4 (341-410)||(37175383-37175452)
chr4 (340-409)||(42168275-42168344)
chr4 (341-409)||(29290325-29290393)
chr4 (341-409)||(34491897-34491965)
chr4 (342-410)||(41858713-41858781)
chr4 (338-410)||(56513668-56513740)
chr4 (342-373)||(2401220-2401251)
chr4 (343-410)||(6920604-6920671)
chr4 (338-373)||(23236994-23237029)
chr4 (334-373)||(51779525-51779564)
chr4 (335-373)||(22100908-22100946)
chr4 (339-373)||(37731005-37731039)
chr4 (335-373)||(43609252-43609290)
chr4 (336-373)||(22496712-22496749)
chr4 (340-373)||(23138034-23138067)
chr4 (341-369)||(29832434-29832462)
chr4 (341-373)||(30609227-30609259)
[»] chr8 (33 HSPs)
chr8 (338-410)||(28074475-28074547)
chr8 (342-410)||(35544206-35544274)
chr8 (341-410)||(5830941-5831010)
chr8 (341-410)||(7427383-7427452)
chr8 (341-410)||(39284195-39284264)
chr8 (341-409)||(12000479-12000547)
chr8 (342-410)||(14433362-14433430)
chr8 (342-410)||(19715227-19715295)
chr8 (342-410)||(23597261-23597329)
chr8 (342-410)||(23606183-23606251)
chr8 (342-410)||(27919639-27919707)
chr8 (342-410)||(29938290-29938358)
chr8 (338-410)||(30087941-30088013)
chr8 (342-410)||(39645922-39645990)
chr8 (342-410)||(42373220-42373288)
chr8 (342-410)||(42946633-42946701)
chr8 (339-410)||(24422523-24422594)
chr8 (342-409)||(38896673-38896740)
chr8 (340-410)||(30526155-30526225)
chr8 (341-410)||(6878511-6878580)
chr8 (341-410)||(39169003-39169072)
chr8 (341-409)||(20091190-20091258)
chr8 (342-410)||(31873633-31873701)
chr8 (341-409)||(35631026-35631094)
chr8 (342-409)||(22578205-22578272)
chr8 (340-409)||(18673366-18673435)
chr8 (342-410)||(16421860-16421928)
chr8 (342-410)||(18203232-18203300)
chr8 (342-409)||(34908679-34908747)
chr8 (342-373)||(8378340-8378371)
chr8 (342-373)||(16872611-16872642)
chr8 (342-373)||(37504990-37505021)
chr8 (333-373)||(40488131-40488171)
[»] chr5 (30 HSPs)
chr5 (342-410)||(5378179-5378247)
chr5 (342-410)||(12360787-12360855)
chr5 (342-410)||(35869929-35869997)
chr5 (341-410)||(35189176-35189245)
chr5 (342-410)||(31196267-31196335)
chr5 (339-410)||(4047816-4047887)
chr5 (339-406)||(7363315-7363382)
chr5 (339-410)||(27187426-27187497)
chr5 (342-409)||(29816204-29816271)
chr5 (342-409)||(34163122-34163189)
chr5 (342-409)||(34382036-34382103)
chr5 (341-410)||(8225607-8225676)
chr5 (341-410)||(18026113-18026182)
chr5 (337-410)||(27293512-27293585)
chr5 (341-410)||(36302472-36302541)
chr5 (342-410)||(4060788-4060856)
chr5 (342-410)||(4456393-4456461)
chr5 (342-410)||(29619431-29619499)
chr5 (339-410)||(9201126-9201197)
chr5 (342-410)||(42940764-42940834)
chr5 (341-410)||(8042568-8042636)
chr5 (341-410)||(11130150-11130219)
chr5 (337-410)||(20656472-20656545)
chr5 (335-368)||(32833557-32833590)
chr5 (342-373)||(3633921-3633952)
chr5 (339-373)||(33905-33939)
chr5 (332-373)||(19282692-19282733)
chr5 (340-373)||(21772902-21772935)
chr5 (341-410)||(35584927-35584996)
chr5 (345-373)||(6923011-6923039)
[»] chr3 (43 HSPs)
chr3 (342-410)||(25904122-25904190)
chr3 (342-410)||(44048098-44048166)
chr3 (335-409)||(28226964-28227038)
chr3 (341-410)||(47053995-47054064)
chr3 (342-410)||(23609447-23609515)
chr3 (342-410)||(34663430-34663498)
chr3 (342-410)||(38783655-38783723)
chr3 (342-410)||(43599570-43599638)
chr3 (342-410)||(45824099-45824167)
chr3 (342-410)||(52040463-52040531)
chr3 (342-409)||(21216881-21216948)
chr3 (340-410)||(29227384-29227454)
chr3 (342-403)||(3671601-3671662)
chr3 (341-410)||(24089327-24089396)
chr3 (342-410)||(8108435-8108503)
chr3 (342-410)||(19961039-19961107)
chr3 (338-410)||(27942228-27942300)
chr3 (342-410)||(29651993-29652061)
chr3 (342-410)||(33840014-33840082)
chr3 (341-409)||(40643315-40643383)
chr3 (342-410)||(41751101-41751169)
chr3 (342-410)||(48333710-48333778)
chr3 (342-410)||(52060485-52060553)
chr3 (342-409)||(24978829-24978896)
chr3 (339-410)||(42662672-42662743)
chr3 (340-410)||(47241160-47241230)
chr3 (341-410)||(390742-390811)
chr3 (341-410)||(21272627-21272696)
chr3 (341-373)||(27848901-27848933)
chr3 (342-373)||(7674157-7674188)
chr3 (342-373)||(34817155-34817186)
chr3 (342-373)||(43175734-43175765)
chr3 (342-373)||(51865689-51865720)
chr3 (342-373)||(54103964-54103995)
chr3 (339-373)||(5925297-5925331)
chr3 (332-366)||(13759626-13759660)
chr3 (339-373)||(32100332-32100366)
chr3 (343-373)||(54080361-54080391)
chr3 (341-410)||(20394205-20394274)
chr3 (337-366)||(53654959-53654988)
chr3 (337-373)||(8096856-8096892)
chr3 (382-410)||(30358758-30358786)
chr3 (340-368)||(32078016-32078044)
[»] chr1 (40 HSPs)
chr1 (342-410)||(16010916-16010984)
chr1 (342-410)||(32145353-32145421)
chr1 (337-410)||(4226234-4226307)
chr1 (342-410)||(4750413-4750481)
chr1 (342-410)||(6920943-6921011)
chr1 (341-409)||(8712092-8712160)
chr1 (342-410)||(18127334-18127402)
chr1 (342-410)||(31045556-31045624)
chr1 (342-410)||(34967544-34967612)
chr1 (342-410)||(38238866-38238934)
chr1 (342-409)||(3552774-3552841)
chr1 (342-409)||(24583829-24583896)
chr1 (342-409)||(24589498-24589565)
chr1 (339-410)||(28011064-28011135)
chr1 (342-409)||(39282532-39282599)
chr1 (337-410)||(19010772-19010845)
chr1 (345-410)||(34347274-34347339)
chr1 (341-410)||(50324826-50324895)
chr1 (342-409)||(26333498-26333565)
chr1 (339-373)||(32557929-32557963)
chr1 (344-410)||(42643110-42643176)
chr1 (340-409)||(16705292-16705361)
chr1 (340-373)||(23827363-23827396)
chr1 (342-403)||(29672303-29672364)
chr1 (341-409)||(22172643-22172711)
chr1 (342-410)||(41529109-41529177)
chr1 (342-410)||(49251778-49251846)
chr1 (331-366)||(3550249-3550284)
chr1 (342-373)||(16436055-16436086)
chr1 (337-368)||(23549459-23549490)
chr1 (342-373)||(23624839-23624870)
chr1 (342-373)||(50942619-50942650)
chr1 (338-368)||(2619602-2619632)
chr1 (336-373)||(26551723-26551760)
chr1 (341-402)||(30679272-30679333)
chr1 (339-368)||(32049584-32049613)
chr1 (337-369)||(44789263-44789295)
chr1 (382-410)||(48355791-48355819)
chr1 (341-373)||(51905847-51905879)
chr1 (341-369)||(52177782-52177810)
[»] chr2 (39 HSPs)
chr2 (341-410)||(18450143-18450212)
chr2 (341-410)||(30780055-30780124)
chr2 (342-410)||(40171751-40171819)
chr2 (342-409)||(14527749-14527816)
chr2 (342-409)||(14943478-14943545)
chr2 (339-410)||(28786937-28787008)
chr2 (342-409)||(40833468-40833535)
chr2 (133-244)||(8525568-8525676)
chr2 (342-403)||(19002905-19002966)
chr2 (342-410)||(325345-325413)
chr2 (342-410)||(22060979-22061047)
chr2 (337-409)||(39407771-39407843)
chr2 (342-410)||(39927704-39927772)
chr2 (342-410)||(41095925-41095993)
chr2 (342-409)||(13375311-13375378)
chr2 (340-410)||(38959733-38959803)
chr2 (341-410)||(10877303-10877372)
chr2 (341-410)||(12363619-12363688)
chr2 (341-410)||(15848624-15848693)
chr2 (342-410)||(34036097-34036166)
chr2 (345-410)||(35669689-35669754)
chr2 (336-373)||(40171824-40171861)
chr2 (342-402)||(3628606-3628666)
chr2 (342-410)||(36443513-36443581)
chr2 (341-373)||(42056035-42056067)
chr2 (342-373)||(27244921-27244952)
chr2 (342-373)||(31909828-31909859)
chr2 (341-410)||(3873624-3873694)
chr2 (337-410)||(16198387-16198460)
chr2 (341-410)||(21288850-21288919)
chr2 (340-373)||(29026966-29026999)
chr2 (345-410)||(44653644-44653709)
chr2 (341-373)||(1667010-1667042)
chr2 (341-373)||(8495277-8495309)
chr2 (341-373)||(17399760-17399792)
chr2 (345-373)||(23494444-23494472)
chr2 (341-373)||(32068467-32068499)
chr2 (341-373)||(40425212-40425244)
chr2 (341-373)||(43521643-43521675)
[»] scaffold0160 (1 HSPs)
scaffold0160 (342-409)||(25975-26042)
[»] scaffold0011 (1 HSPs)
scaffold0011 (342-410)||(63344-63412)
[»] scaffold0037 (1 HSPs)
scaffold0037 (342-409)||(98862-98929)
[»] scaffold0264 (1 HSPs)
scaffold0264 (342-373)||(18930-18961)
[»] scaffold0009 (1 HSPs)
scaffold0009 (341-410)||(8436-8504)
[»] scaffold0444 (1 HSPs)
scaffold0444 (341-373)||(7594-7626)


Alignment Details
Target: chr6 (Bit Score: 49; Significance: 7e-19; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 338 - 410
Target Start/End: Original strand, 11172881 - 11172953
Alignment:
Q  338 ttattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  11172881 ttattactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcgctttac 11172953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 1352471 - 1352539
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  1352471 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcgctttac 1352539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 332 - 410
Target Start/End: Original strand, 32142365 - 32142443
Alignment:
Q  332 ttctatttattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||| || |||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||    
T  32142365 ttctatgtactactccctccgtcccaaattgtatgtcattttagaaaaaatatttgtcccaaattgtatgtcgctttac 32142443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 11615352 - 11615420
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||| |||||||||||        |||||||||||||||||||||||||||||    
T  11615352 tactccctccgtcccaaattatatgtcactttagaaaaaatatttgtcccaaattgtatgtcgctttac 11615420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 17941608 - 17941676
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||| |||||||        |||||||||||||||||||||||||||||    
T  17941608 tactccctccgtcccaaattgtatatcactttagaaaaaatatttgtcccaaattgtatgtcgctttac 17941676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 3787092 - 3787159
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||    
T  3787092 tactccctccgtcccaaattgtatgtcactttaaaaaaaatatttgtcccaaattgtatgtcacttta 3787159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 6835712 - 6835779
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||    
T  6835712 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcacttta 6835779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 410
Target Start/End: Original strand, 9961312 - 9961383
Alignment:
Q  339 tattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||||||||||        ||||||||||||||| ||||||| |||||    
T  9961312 tattactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcgttttac 9961383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 410
Target Start/End: Complemental strand, 35040117 - 35040048
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||||||||         | ||||||||||||||||||||||||||    
T  35040117 ttactccctccgtcccaaattgtatgtcactttgaaaaaaaaaattgtcccaaattgtatgtcgctttac 35040048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 8201460 - 8201528
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||| |||||| |||||||||||||    
T  8201460 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtctcaaattatatgtcgctttac 8201528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 409
Target Start/End: Complemental strand, 2603677 - 2603610
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| |||||    
T  2603677 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtctcaaattgtatgtcacttta 2603610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 9461573 - 9461642
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcacttt-nnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||         ||||||||||||||| |||||||||||||    
T  9461573 tactccctccgtcccaaattgtatgtcactttagaaaaaaatatttgtcccaaattatatgtcgctttac 9461642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 15497841 - 15497910
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtccc-aaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||||| ||||| |||||||||||||    
T  15497841 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaaattatatgtcgctttac 15497910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 373
Target Start/End: Complemental strand, 32393747 - 32393715
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||||||||||||||||||||||||||    
T  32393747 ttactccctccgtcccaaattgtatgtcacttt 32393715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 373
Target Start/End: Complemental strand, 10364753 - 10364722
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||||||||||||||||||||||||||||||    
T  10364753 tactccctccgtcccaaattgtatgtcacttt 10364722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 5489572 - 5489606
Alignment:
Q  339 tattactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||||||||||||||||||||||| ||||    
T  5489572 tattactccctccgtcccaaattgtatgtcgcttt 5489606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 366
Target Start/End: Complemental strand, 6836000 - 6835972
Alignment:
Q  338 ttattactccctccgtcccaaattgtatg 366  Q
    |||||||||||||||||||||||||||||    
T  6836000 ttattactccctccgtcccaaattgtatg 6835972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 366
Target Start/End: Original strand, 9660219 - 9660247
Alignment:
Q  338 ttattactccctccgtcccaaattgtatg 366  Q
    |||||||||||||||||||||||||||||    
T  9660219 ttattactccctccgtcccaaattgtatg 9660247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Original strand, 29901193 - 29901225
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||||||||||||||||||||| ||||    
T  29901193 ttactccctccgtcccaaattgtatgtcgcttt 29901225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 355
Target Start/End: Complemental strand, 31780492 - 31780456
Alignment:
Q  319 tttgctctctttattctatttattactccctccgtcc 355  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  31780492 tttgctctctttattatatttattactccctctgtcc 31780456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 336 - 410
Target Start/End: Original strand, 44186876 - 44186950
Alignment:
Q  336 atttattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||| ||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  44186876 atttattactccctctgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcgctttac 44186950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 44480986 - 44481054
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  44480986 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcgctttac 44481054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 45780931 - 45780863
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  45780931 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcgctttac 45780863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 46373284 - 46373216
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  46373284 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcgctttac 46373216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 339 - 410
Target Start/End: Complemental strand, 24685712 - 24685641
Alignment:
Q  339 tattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| ||||||    
T  24685712 tattactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcactttac 24685641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 1643787 - 1643719
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||| ||||||    
T  1643787 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcactttac 1643719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 4513641 - 4513573
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||||||||||| |||||    
T  4513641 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcgttttac 4513573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 23059070 - 23059138
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||||    
T  23059070 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcgctttac 23059138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 23726653 - 23726589
Alignment:
Q  346 ccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  23726653 ccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcgctttac 23726589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 40768758 - 40768690
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||| |||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  40768758 tacttcctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcgctttac 40768690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 45823240 - 45823172
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||||| |||||||||||||||||||||    
T  45823240 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgttccaaattgtatgtcgctttac 45823172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 340 - 410
Target Start/End: Original strand, 6882838 - 6882908
Alignment:
Q  340 attactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||| |||||||        ||||||||||||||| |||||||||||||    
T  6882838 attactccctccgtcccaaattgtatatcactttagaaaaaatatttgtcccaaattatatgtcgctttac 6882908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 340 - 410
Target Start/End: Complemental strand, 35421898 - 35421828
Alignment:
Q  340 attactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| ||||||    
T  35421898 attactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtctcaaattgtatgtcactttac 35421828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 410
Target Start/End: Complemental strand, 19866559 - 19866490
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||| ||||        | |||||||||||||||||||||||||||    
T  19866559 ttactccctccgtcccaaattgtatgtcgctttggaaattttttttgtcccaaattgtatgtcgctttac 19866490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 410
Target Start/End: Original strand, 31502803 - 31502876
Alignment:
Q  337 tttattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||| ||||||||||||||||||||||||||| ||||        ||||||||||||||| |||||||||||||    
T  31502803 tttaatactccctccgtcccaaattgtatgtcgctttaggaaaaatatttgtcccaaattatatgtcgctttac 31502876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 410
Target Start/End: Complemental strand, 47578962 - 47578893
Alignment:
Q  340 attactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||| |||||    
T  47578962 attactccctccgtcccaaattgtatgtcacttt-agaaaaatatttgtcccaaattgtatgtcgttttac 47578893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 13439317 - 13439385
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||| || ||||||||||    
T  13439317 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatacgtcgctttac 13439385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 24924453 - 24924385
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||| ||| ||||||||||||||||    
T  24924453 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtctcaatttgtatgtcgctttac 24924385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 44894855 - 44894787
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||| |||||| |||||||||||||    
T  44894855 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcacaaattatatgtcgctttac 44894787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 410
Target Start/End: Complemental strand, 5680486 - 5680415
Alignment:
Q  339 tattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||| |||||||||||        ||||||| |||||||||||||| ||||||    
T  5680486 tattactccctccgtcccaaattatatgtcactttaaaaaaaatatttgttccaaattgtatgtcactttac 5680415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 410
Target Start/End: Complemental strand, 5705538 - 5705467
Alignment:
Q  339 tattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||| |||||||||||        ||||||| |||||||||||||| ||||||    
T  5705538 tattactccctccgtcccaaattatatgtcactttaaaaaaaatatttgttccaaattgtatgtcactttac 5705467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 22918173 - 22918240
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||| |||||| |||||    
T  22918173 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcacttta 22918240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 403
Target Start/End: Original strand, 5528383 - 5528445
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtc 403  Q
    ||||| |||||||||||||||||||||||||||        ||||||||||||||||||||||    
T  5528383 ttacttcctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtc 5528445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 25756338 - 25756372
Alignment:
Q  339 tattactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||||||||||||||||||||||||||||    
T  25756338 tattactccctccgtcccaaattgtatgtcacttt 25756372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 9417884 - 9417816
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||         |||||||| ||||| |||||||||||||    
T  9417884 tactccctccgtcccaaattgtatgtcactttggaaaaaaaatttgtcctaaattatatgtcgctttac 9417816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 10453189 - 10453121
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||| |||||| || ||||||||||    
T  10453189 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtctcaaattatacgtcgctttac 10453121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 373
Target Start/End: Original strand, 9818084 - 9818115
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||||||||||||||||||||||||||||||    
T  9818084 tactccctccgtcccaaattgtatgtcacttt 9818115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 373
Target Start/End: Original strand, 10720009 - 10720040
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||||||||||||||||||||||||||||||    
T  10720009 tactccctccgtcccaaattgtatgtcacttt 10720040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 373
Target Start/End: Complemental strand, 42688807 - 42688776
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||||||||||||||||||||||||||||||    
T  42688807 tactccctccgtcccaaattgtatgtcacttt 42688776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 3945126 - 3945160
Alignment:
Q  339 tattactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||||||||||||||||||||||| ||||    
T  3945126 tattactccctccgtcccaaattgtatgtcgcttt 3945160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 366
Target Start/End: Complemental strand, 40704678 - 40704648
Alignment:
Q  336 atttattactccctccgtcccaaattgtatg 366  Q
    |||||||||||||||||||||||||||||||    
T  40704678 atttattactccctccgtcccaaattgtatg 40704648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 44452184 - 44452218
Alignment:
Q  339 tattactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||||||||||||||||||||||| ||||    
T  44452184 tattactccctccgtcccaaattgtatgtcgcttt 44452218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 7978991 - 7979024
Alignment:
Q  340 attactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||||||||||||||||||||| |||||    
T  7978991 attactccctccgtcccaaattgtatgttacttt 7979024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 368
Target Start/End: Original strand, 43576737 - 43576766
Alignment:
Q  339 tattactccctccgtcccaaattgtatgtc 368  Q
    ||||||||||||||||||||||||||||||    
T  43576737 tattactccctccgtcccaaattgtatgtc 43576766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 364
Target Start/End: Complemental strand, 43577028 - 43576999
Alignment:
Q  335 tatttattactccctccgtcccaaattgta 364  Q
    ||||||||||||||||||||||||||||||    
T  43577028 tatttattactccctccgtcccaaattgta 43576999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Original strand, 9140592 - 9140624
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||| ||||||||||||||||||||||    
T  9140592 ttactccctctgtcccaaattgtatgtcacttt 9140624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 410
Target Start/End: Complemental strand, 33938456 - 33938428
Alignment:
Q  382 tatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||||    
T  33938456 tatttgtcccaaattgtatgtcgctttac 33938428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Complemental strand, 40353914 - 40353882
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||||||||||||||||||||||||| |||||    
T  40353914 ttactccctccgtcccaaattgtatgttacttt 40353882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 410
Target Start/End: Complemental strand, 56038699 - 56038629
Alignment:
Q  340 attactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  56038699 attactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcgctttac 56038629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 341 - 410
Target Start/End: Original strand, 22019089 - 22019158
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  22019089 ttactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcgctttac 22019158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 337 - 409
Target Start/End: Complemental strand, 25771264 - 25771192
Alignment:
Q  337 tttattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    |||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||    
T  25771264 tttattactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcacttta 25771192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 30088879 - 30088811
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  30088879 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcgctttac 30088811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 31648615 - 31648547
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  31648615 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcgctttac 31648547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 410
Target Start/End: Complemental strand, 42179734 - 42179662
Alignment:
Q  338 ttattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| ||||||    
T  42179734 ttattactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcactttac 42179662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 410
Target Start/End: Original strand, 13880450 - 13880519
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||||    
T  13880450 ttactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcgctttac 13880519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 410
Target Start/End: Complemental strand, 32860901 - 32860832
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||||||||        |||||||||||||||||||||| ||||||    
T  32860901 ttactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcactttac 32860832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 4294210 - 4294142
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||||    
T  4294210 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcgctttac 4294142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 10555377 - 10555309
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||| ||||||    
T  10555377 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcactttac 10555309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 23621638 - 23621706
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||||    
T  23621638 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcgctttac 23621706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 35877130 - 35877058
Alignment:
Q  336 atttattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttt 408  Q
    ||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||| ||||    
T  35877130 atttattactccctccgtcccaaattgtatgtcactttagaaaaataatttgtcccaaattgtatgtcacttt 35877058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 45250070 - 45250138
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||    
T  45250070 tactccctccgtcccaaattgtatgtcattttagaaaaaatatttgtcccaaattgtatgtcgctttac 45250138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 49236040 - 49235972
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||||    
T  49236040 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattctatgtcgctttac 49235972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 34016767 - 34016834
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||    
T  34016767 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcacttta 34016834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 48380573 - 48380640
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||    
T  48380573 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcacttta 48380640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 409
Target Start/End: Complemental strand, 51817225 - 51817158
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||    
T  51817225 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcacttta 51817158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 25367530 - 25367457
Alignment:
Q  337 tttattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||| |||||||||||| |||||||||||||||||||        |||||||||||||||||||||| ||||||    
T  25367530 tttactactccctccgttccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcactttac 25367457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 342 - 407
Target Start/End: Original strand, 34447632 - 34447697
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctt 407  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||| ||||||||||    
T  34447632 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcgctt 34447697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 7258190 - 7258122
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||||||| |||||||||||| ||||||    
T  7258190 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcctaaattgtatgtcactttac 7258122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 410
Target Start/End: Complemental strand, 10125766 - 10125694
Alignment:
Q  338 ttattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||| ||||         |||||||||||||| |||||||||||||    
T  10125766 ttattactccctccgtcccaaattgtatgtcgctttggaaaaaaaatttgtcccaaattatatgtcgctttac 10125694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 409
Target Start/End: Complemental strand, 42507817 - 42507750
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||||||| || |||||    
T  42507817 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatatcacttta 42507750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 55968541 - 55968608
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| |||||    
T  55968541 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtctcaaattgtatgtcacttta 55968608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 409
Target Start/End: Complemental strand, 55984395 - 55984328
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| |||||    
T  55984395 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtctcaaattgtatgtcacttta 55984328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 410
Target Start/End: Original strand, 23222470 - 23222539
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||| ||||         ||||||||||||||||||||| ||||||    
T  23222470 ttactccctccgtcccaaattgtatgtcgctttaggaaaaaaatttgtcccaaattgtatgtcactttac 23222539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 410
Target Start/End: Original strand, 31486853 - 31486922
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||| |||||||||||||||||||        |||||||||||| ||||||||| ||||||    
T  31486853 ttactccctccgttccaaattgtatgtcactttagaaaaagtatttgtcccaagttgtatgtcactttac 31486922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 410
Target Start/End: Complemental strand, 37175452 - 37175383
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||| ||||         |||||||||||||| |||||||||||||    
T  37175452 ttactccctccgtcccaaattgtatgtcgctttggaaaaaaaatttgtcccaaattatatgtcgctttac 37175383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 340 - 409
Target Start/End: Original strand, 42168275 - 42168344
Alignment:
Q  340 attactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||| ||||||||||||||||||||||||||        |||||||| ||||||||||||| |||||    
T  42168275 attactcgctccgtcccaaattgtatgtcactttagaaaaaatatttgtctcaaattgtatgtcacttta 42168344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 409
Target Start/End: Complemental strand, 29290393 - 29290325
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    |||||||||||||| ||||||||||||||||||        ||||||||| |||||||||||| |||||    
T  29290393 ttactccctccgtctcaaattgtatgtcactttagaaaaaatatttgtcctaaattgtatgtcacttta 29290325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 409
Target Start/End: Complemental strand, 34491965 - 34491897
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||| |||||||||||||||||||||||||||        ||||||| |||||||||||||| |||||    
T  34491965 ttacttcctccgtcccaaattgtatgtcactttagaaaaaatatttgttccaaattgtatgtcacttta 34491897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 41858713 - 41858781
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||| || |||||| |||||||||||||    
T  41858713 tactccctccgtcccaaattgtatgtcactttaaaaaaaatatttttctcaaattatatgtcgctttac 41858781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 410
Target Start/End: Complemental strand, 56513740 - 56513668
Alignment:
Q  338 ttattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||| ||||         |||||||||||||| || ||||||||||    
T  56513740 ttattactccctccgtcccaaattgtatgtccctttggaaaaaaaatttgtcccaaattataagtcgctttac 56513668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 373
Target Start/End: Original strand, 2401220 - 2401251
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||||||||||||||||||||||||||||||    
T  2401220 tactccctccgtcccaaattgtatgtcacttt 2401251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 410
Target Start/End: Original strand, 6920604 - 6920671
Alignment:
Q  343 actccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||||||        ||||| ||| |||||||||||| ||||||    
T  6920604 actccctccgtcccaaattgtatgtcactttataaaaaatatttatcctaaattgtatgtcactttac 6920671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 373
Target Start/End: Original strand, 23236994 - 23237029
Alignment:
Q  338 ttattactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||||||||||||||||||||||||||||| ||||    
T  23236994 ttattactccctccgtcccaaattgtatgtcgcttt 23237029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 51779525 - 51779564
Alignment:
Q  334 ctatttattactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  51779525 ctattttttactctctccgtcccaaattgtatgtcacttt 51779564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 373
Target Start/End: Original strand, 22100908 - 22100946
Alignment:
Q  335 tatttattactccctccgtcccaaattgtatgtcacttt 373  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  22100908 tattaattactccctccgtcccaaattgtatgtcgcttt 22100946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 37731039 - 37731005
Alignment:
Q  339 tattactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||||||||||||||||||||||| ||||    
T  37731039 tattactccctccgtcccaaattgtatgtcgcttt 37731005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 373
Target Start/End: Original strand, 43609252 - 43609290
Alignment:
Q  335 tatttattactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  43609252 tatttgttactccctccgtcccaaattgtatatcacttt 43609290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 373
Target Start/End: Complemental strand, 22496749 - 22496712
Alignment:
Q  336 atttattactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  22496749 atttaatactccatccgtcccaaattgtatgtcacttt 22496712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 23138034 - 23138067
Alignment:
Q  340 attactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||||||||||||||||||||||||||| ||||    
T  23138034 attactccctccgtcccaaattgtatgtcgcttt 23138067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 369
Target Start/End: Original strand, 29832434 - 29832462
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtca 369  Q
    |||||||||||||||||||||||||||||    
T  29832434 ttactccctccgtcccaaattgtatgtca 29832462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Original strand, 30609227 - 30609259
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||||||||||||||||||||| ||||    
T  30609227 ttactccctccgtcccaaattgtatgtcgcttt 30609259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 410
Target Start/End: Complemental strand, 28074547 - 28074475
Alignment:
Q  338 ttattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| ||||||    
T  28074547 ttattactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcactttac 28074475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 35544274 - 35544206
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  35544274 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcgctttac 35544206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 410
Target Start/End: Original strand, 5830941 - 5831010
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||||    
T  5830941 ttactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattttatgtcgctttac 5831010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 410
Target Start/End: Complemental strand, 7427452 - 7427383
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||| |||||||||||||        |||||||||||||||||||||||||||||    
T  7427452 ttactccctccgtcccaaaatgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcgctttac 7427383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 410
Target Start/End: Original strand, 39284195 - 39284264
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||||||||        ||||| |||||||||||||||||||||||    
T  39284195 ttactccctccgtcccaaattgtatgtcactttagaaaaaatatttatcccaaattgtatgtcgctttac 39284264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 341 - 409
Target Start/End: Original strand, 12000479 - 12000547
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    |||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||    
T  12000479 ttactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcacttta 12000547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 14433430 - 14433362
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||||    
T  14433430 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcgctttac 14433362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 19715227 - 19715295
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||| ||||||    
T  19715227 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcactttac 19715295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 23597261 - 23597329
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||| |||||||||||||||||||||||    
T  23597261 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttatcccaaattgtatgtcgctttac 23597329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 23606183 - 23606251
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||| |||||||||||||||||||||||    
T  23606183 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttatcccaaattgtatgtcgctttac 23606251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 27919707 - 27919639
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        | |||||||||||||||||||||||||||    
T  27919707 tactccctccgtcccaaattgtatgtcactttggaaattttttttgtcccaaattgtatgtcgctttac 27919639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 29938290 - 29938358
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||||||||||| |||||    
T  29938290 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcgttttac 29938358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 338 - 410
Target Start/End: Complemental strand, 30088013 - 30087941
Alignment:
Q  338 ttattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||| |||| |||        |||||||||||||||||||||||||||||    
T  30088013 ttattactccctccgtcccaaattgtacgtcattttagaaaaaatatttgtcccaaattgtatgtcgctttac 30087941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 39645990 - 39645922
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||    
T  39645990 tactccctccgtcccaaattgtatgtcactttaaaaaaaatatttgtctcaaattgtatgtcgctttac 39645922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 42373288 - 42373220
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||    
T  42373288 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtctcaaattgtatgtcgctttac 42373220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 42946701 - 42946633
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||||||| |||||||||||||||||||    
T  42946701 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcctaaattgtatgtcgctttac 42946633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 410
Target Start/End: Complemental strand, 24422594 - 24422523
Alignment:
Q  339 tattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||| |||||||||||        ||||||||||||||| |||||||||||||    
T  24422594 tattactccctccgtcccaaattatatgtcactttagaaaaaatatttgtcccaaattatatgtcgctttac 24422523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 409
Target Start/End: Complemental strand, 38896740 - 38896673
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||    
T  38896740 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcacttta 38896673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 340 - 410
Target Start/End: Original strand, 30526155 - 30526225
Alignment:
Q  340 attactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||| ||||||||||||| |||        |||||||||||||||||||||||||||||    
T  30526155 attactccctccgtcctaaattgtatgtcattttagaaaaaatatttgtcccaaattgtatgtcgctttac 30526225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 410
Target Start/End: Original strand, 6878511 - 6878580
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||||||||         |||||||||||||||||||||| |||||    
T  6878511 ttactccctccgtcccaaattgtatgtcactttagaaaaaacatttgtcccaaattgtatgtcgttttac 6878580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 410
Target Start/End: Complemental strand, 39169072 - 39169003
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||| |||||||||||||||||||        |||||||||||||||||||||| ||||||    
T  39169072 ttactccctccgttccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcactttac 39169003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 409
Target Start/End: Complemental strand, 20091258 - 20091190
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    |||||||||||||||||||||||||||||||||        ||||||||| |||||||||||| |||||    
T  20091258 ttactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcctaaattgtatgtcacttta 20091190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 31873701 - 31873633
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||| || ||||||||||    
T  31873701 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatacgtcgctttac 31873633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 409
Target Start/End: Original strand, 35631026 - 35631094
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    |||||||||||||||||||||||||||||||||        ||||||||||||||| |||||| |||||    
T  35631026 ttactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcacttta 35631094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 22578205 - 22578272
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||| |||||| |||||    
T  22578205 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcacttta 22578272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 340 - 409
Target Start/End: Original strand, 18673366 - 18673435
Alignment:
Q  340 attactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    |||||||||||||||| |||||||||||||||||        ||||||||||||||| |||||| |||||    
T  18673366 attactccctccgtcctaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcacttta 18673435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 16421860 - 16421928
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||         | ||||||||||||||||||| ||||||    
T  16421860 tactccctccgtcccaaattgtatgtcactttggaaaaaaaaattgtcccaaattgtatgtcactttac 16421928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 18203300 - 18203232
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||         |||||| |||||||||||||| ||||||    
T  18203300 tactccctccgtcccaaattgtatgtcactttacaaaaataatttgttccaaattgtatgtcactttac 18203232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 34908679 - 34908747
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcacttt-nnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||         |||||||||||||||||||||| |||||    
T  34908679 tactccctccgtcccaaattgtatgtcactttaaaaaaaaatatttgtcccaaattgtatgtcacttta 34908747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 373
Target Start/End: Complemental strand, 8378371 - 8378340
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||||||||||||||||||||||||||||||    
T  8378371 tactccctccgtcccaaattgtatgtcacttt 8378340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 373
Target Start/End: Complemental strand, 16872642 - 16872611
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||||||||||||||||||||||||||||||    
T  16872642 tactccctccgtcccaaattgtatgtcacttt 16872611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 373
Target Start/End: Original strand, 37504990 - 37505021
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||||||||||||||||||||||||||||||    
T  37504990 tactccctccgtcccaaattgtatgtcacttt 37505021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 373
Target Start/End: Original strand, 40488131 - 40488171
Alignment:
Q  333 tctatttattactccctccgtcccaaattgtatgtcacttt 373  Q
    |||| ||| |||||||||| |||||||||||||||||||||    
T  40488131 tctaattaatactccctccttcccaaattgtatgtcacttt 40488171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 5378247 - 5378179
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  5378247 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcgctttac 5378179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 12360787 - 12360855
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  12360787 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcgctttac 12360855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 35869929 - 35869997
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  35869929 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcgctttac 35869997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 410
Target Start/End: Original strand, 35189176 - 35189245
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||    
T  35189176 ttactccctccgtcccaaattgtatgtcattttagaaaaaatatttgtcccaaattgtatgtcgctttac 35189245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 31196335 - 31196267
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        | |||||||||||||||||||||||||||    
T  31196335 tactccctccgtcccaaattgtatgtcactttggaaattttttttgtcccaaattgtatgtcgctttac 31196267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 410
Target Start/End: Complemental strand, 4047887 - 4047816
Alignment:
Q  339 tattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||| |||||| ||||||||||||||||||        |||||||||||||||||||||||||||||    
T  4047887 tattactccttccgtctcaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcgctttac 4047816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 406
Target Start/End: Complemental strand, 7363382 - 7363315
Alignment:
Q  339 tattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgct 406  Q
    |||||||||||||||||||||||||||||||||||        ||||||||||||||| |||||||||    
T  7363382 tattactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcgct 7363315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 410
Target Start/End: Complemental strand, 27187497 - 27187426
Alignment:
Q  339 tattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||| |||||||||||||||||        ||||||||||||||| |||||||||||||    
T  27187497 tattactccctccgtcctaaattgtatgtcactttggaaaaaatatttgtcccaaattatatgtcgctttac 27187426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 29816204 - 29816271
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||    
T  29816204 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcacttta 29816271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 34163122 - 34163189
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||    
T  34163122 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcacttta 34163189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 409
Target Start/End: Complemental strand, 34382103 - 34382036
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||    
T  34382103 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcacttta 34382036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 410
Target Start/End: Original strand, 8225607 - 8225676
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||| ||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||||    
T  8225607 ttaccccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcgctttac 8225676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 410
Target Start/End: Complemental strand, 18026182 - 18026113
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||| ||||        ||||||||||||||| |||||||||||||    
T  18026182 ttactccctccgtcccaaattgtatgtcgctttggaaaaaatatttgtcccaaattatatgtcgctttac 18026113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 27293585 - 27293512
Alignment:
Q  337 tttattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||| ||||||||| ||||||||||||||||||||||        ||||||||| |||||||||||||||||||    
T  27293585 tttaatactccctctgtcccaaattgtatgtcactttagaaaaaatatttgtcctaaattgtatgtcgctttac 27293512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 410
Target Start/End: Complemental strand, 36302541 - 36302472
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||| ||||||||||||||||||||||        ||||||||||||||| |||||||||||||    
T  36302541 ttactccctctgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcgctttac 36302472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 4060856 - 4060788
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        | ||||||||||||||||||||| |||||    
T  4060856 tactccctccgtcccaaattgtatgtcactttggaaattttttttgtcccaaattgtatgtcgttttac 4060788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 4456393 - 4456461
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||| |||||| ||||||    
T  4456393 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcactttac 4456461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 29619499 - 29619431
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||| ||||||| |||||    
T  29619499 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcgttttac 29619431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 410
Target Start/End: Original strand, 9201126 - 9201197
Alignment:
Q  339 tattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||| |||||||||||||||||        ||||||| ||||||| |||||||||||||    
T  9201126 tattactccctccgtcctaaattgtatgtcactttagaaaaaatatttgttccaaattatatgtcgctttac 9201197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 42940764 - 42940834
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcacttt--nnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||    
T  42940764 tactccctccgtcccaaattgtatgtcactttagaaaaaaaatatttgtcccaaattgtatgtcgctttac 42940834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 410
Target Start/End: Complemental strand, 8042636 - 8042568
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||| |||||||||||||||||||        ||||||| |||||||||||||||||||||    
T  8042636 ttactccctccgttccaaattgtatgtcacttttgaaaaaatatttgt-ccaaattgtatgtcgctttac 8042568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 410
Target Start/End: Original strand, 11130150 - 11130219
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||| |||||        ||||||||| ||||||||||||| |||||    
T  11130150 ttactccctccgtcccaaattgtatgttactttagaaaaaatatttgtcctaaattgtatgtcgttttac 11130219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 20656545 - 20656472
Alignment:
Q  337 tttattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||| |||||||||| ||||||||        ||||||||| ||||| |||||||||||||    
T  20656545 tttattactccctccgttccaaattgtacgtcactttagaaaaaatatttgtcctaaattatatgtcgctttac 20656472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 32833557 - 32833590
Alignment:
Q  335 tatttattactccctccgtcccaaattgtatgtc 368  Q
    ||||||||||||||||||||||||||||||||||    
T  32833557 tatttattactccctccgtcccaaattgtatgtc 32833590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 373
Target Start/End: Original strand, 3633921 - 3633952
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||||||||||||||||||||||||||||||    
T  3633921 tactccctccgtcccaaattgtatgtcacttt 3633952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 33939 - 33905
Alignment:
Q  339 tattactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||||||||||||||||||||||| ||||    
T  33939 tattactccctccgtcccaaattgtatgtcgcttt 33905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 373
Target Start/End: Complemental strand, 19282733 - 19282692
Alignment:
Q  332 ttctatttattactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||| | |||||||||||||||||||||||||||| ||||    
T  19282733 ttctatcttttactccctccgtcccaaattgtatgtcgcttt 19282692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 21772935 - 21772902
Alignment:
Q  340 attactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||||||||| |||||||||||||||||    
T  21772935 attactccctccgtcctaaattgtatgtcacttt 21772902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 410
Target Start/End: Complemental strand, 35584996 - 35584927
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||| ||||         | |||||||||||| |||||||||||||    
T  35584996 ttactccctccgtcccaaattgtatgtcgctttagaaaaaaaaattgtcccaaattatatgtcgctttac 35584927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 373
Target Start/End: Original strand, 6923011 - 6923039
Alignment:
Q  345 tccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||||||||||||||||||||||    
T  6923011 tccctccgtcccaaattgtatgtcacttt 6923039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 25904190 - 25904122
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  25904190 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcgctttac 25904122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 44048098 - 44048166
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  44048098 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcgctttac 44048166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 409
Target Start/End: Original strand, 28226964 - 28227038
Alignment:
Q  335 tatttattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    |||| ||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||    
T  28226964 tattaattactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcacttta 28227038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 410
Target Start/End: Original strand, 47053995 - 47054064
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||||||    
T  47053995 ttactccctccgtcccaaattgtatgtcacattagaaaaaatatttgtcccaaattgtatgtcgctttac 47054064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 23609515 - 23609447
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||| ||||        |||||||||||||||||||||||||||||    
T  23609515 tactccctccgtcccaaattgtatgtcgctttagaaaaaatatttgtcccaaattgtatgtcgctttac 23609447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 34663430 - 34663498
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||||    
T  34663430 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcgctttac 34663498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 38783723 - 38783655
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||||    
T  38783723 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcgctttac 38783655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 43599570 - 43599638
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||||    
T  43599570 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcgctttac 43599638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 45824167 - 45824099
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||||    
T  45824167 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcgctttac 45824099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 52040531 - 52040463
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||| |||||||||||||        |||||||||||||||||||||||||||||    
T  52040531 tactccctccgtcccaaaatgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcgctttac 52040463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 409
Target Start/End: Complemental strand, 21216948 - 21216881
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||    
T  21216948 tactccctccgtcccaaattgtatgtcactttaaaaaaaatatttgtcccaaattgtatgtcacttta 21216881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 340 - 410
Target Start/End: Complemental strand, 29227454 - 29227384
Alignment:
Q  340 attactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||| ||||||    
T  29227454 attactccctccgtcccaaattgtatgtcattttaaaaaaaatatttgtcccaaattgtatgtcactttac 29227384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 342 - 403
Target Start/End: Complemental strand, 3671662 - 3671601
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtc 403  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||||||||||    
T  3671662 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtc 3671601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 410
Target Start/End: Original strand, 24089327 - 24089396
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||||||||        ||||||||| ||||| |||||||||||||    
T  24089327 ttactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtccgaaattatatgtcgctttac 24089396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 8108435 - 8108503
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||| ||||||| |||||||||||||        |||||||||||||||||||||||||||||    
T  8108435 tactccctccatcccaaaatgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcgctttac 8108503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 19961107 - 19961039
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||| |||||||||||||| |||||    
T  19961107 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcacaaattgtatgtcgttttac 19961039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 410
Target Start/End: Complemental strand, 27942300 - 27942228
Alignment:
Q  338 ttattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||| |||||||||||||||||        ||||||||| ||||| |||||||||||||    
T  27942300 ttattactccctccgtcctaaattgtatgtcactttagaaaaaatatttgtcctaaattatatgtcgctttac 27942228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 29651993 - 29652061
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||||| ||||||| |||||||||||||    
T  29651993 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgttccaaattatatgtcgctttac 29652061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 33840082 - 33840014
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||| ||| |||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  33840082 tactccatccatcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcgctttac 33840014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 409
Target Start/End: Original strand, 40643315 - 40643383
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||| |||        |||||||||||||||||||||| |||||    
T  40643315 ttactccctccgtcccaaattgtatgtcattttaaaaaaaatatttgtcccaaattgtatgtcacttta 40643383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 41751101 - 41751169
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||| ||||||| |||||    
T  41751101 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcgttttac 41751169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 48333710 - 48333778
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||| ||||| |||||||    
T  48333710 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgttgctttac 48333778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 52060553 - 52060485
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||| |||||| |||||||||||||    
T  52060553 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtctcaaattatatgtcgctttac 52060485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 24978829 - 24978896
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||        |||||||| ||||||||||||| |||||    
T  24978829 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtctcaaattgtatgtcacttta 24978896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 410
Target Start/End: Complemental strand, 42662743 - 42662672
Alignment:
Q  339 tattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||| ||||||||||||||||||||         |||||| |||||||||||||||||||||    
T  42662743 tattactccctccgccccaaattgtatgtcactttggaaaaaaaatttgttccaaattgtatgtcgctttac 42662672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 410
Target Start/End: Original strand, 47241160 - 47241230
Alignment:
Q  340 attactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||| |||||||||||||||||        |||||||||||||||||||| | ||||||    
T  47241160 attactccctccgtcctaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgccactttac 47241230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 410
Target Start/End: Complemental strand, 390811 - 390742
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||| |||||||||||||||||||         |||||| |||||||||||||||||||||    
T  390811 ttactccctccgttccaaattgtatgtcactttggaaaaaaaatttgttccaaattgtatgtcgctttac 390742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 410
Target Start/End: Original strand, 21272627 - 21272696
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||| ||||         ||||||| ||||||||||||||||||||    
T  21272627 ttactccctccgtcccaaattgtatgtcgctttagggaaaaaatttgtctcaaattgtatgtcgctttac 21272696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 373
Target Start/End: Complemental strand, 27848933 - 27848901
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||||||||||||||||||||||||||    
T  27848933 ttactccctccgtcccaaattgtatgtcacttt 27848901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 373
Target Start/End: Complemental strand, 7674188 - 7674157
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||||||||||||||||||||||||||||||    
T  7674188 tactccctccgtcccaaattgtatgtcacttt 7674157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 373
Target Start/End: Complemental strand, 34817186 - 34817155
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||||||||||||||||||||||||||||||    
T  34817186 tactccctccgtcccaaattgtatgtcacttt 34817155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 373
Target Start/End: Original strand, 43175734 - 43175765
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||||||||||||||||||||||||||||||    
T  43175734 tactccctccgtcccaaattgtatgtcacttt 43175765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 373
Target Start/End: Original strand, 51865689 - 51865720
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||||||||||||||||||||||||||||||    
T  51865689 tactccctccgtcccaaattgtatgtcacttt 51865720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 373
Target Start/End: Complemental strand, 54103995 - 54103964
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||||||||||||||||||||||||||||||    
T  54103995 tactccctccgtcccaaattgtatgtcacttt 54103964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 5925297 - 5925331
Alignment:
Q  339 tattactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||||||||||||||||||||||| ||||    
T  5925297 tattactccctccgtcccaaattgtatgtcgcttt 5925331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 366
Target Start/End: Original strand, 13759626 - 13759660
Alignment:
Q  332 ttctatttattactccctccgtcccaaattgtatg 366  Q
    ||||||||| |||||||||||||||||||||||||    
T  13759626 ttctatttactactccctccgtcccaaattgtatg 13759660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 32100366 - 32100332
Alignment:
Q  339 tattactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||||||||||||||||||||| |||||||||||    
T  32100366 tattactccctccgtcccaaattatatgtcacttt 32100332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 373
Target Start/End: Complemental strand, 54080391 - 54080361
Alignment:
Q  343 actccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||||||||||||||||||||||||    
T  54080391 actccctccgtcccaaattgtatgtcacttt 54080361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 410
Target Start/End: Complemental strand, 20394274 - 20394205
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||| |||||||||||||||||||||||||         |||||| |||||||||| ||||||||||    
T  20394274 ttactccatccgtcccaaattgtatgtcactttggaaaaaaaatttgttccaaattgtacgtcgctttac 20394205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 366
Target Start/End: Original strand, 53654959 - 53654988
Alignment:
Q  337 tttattactccctccgtcccaaattgtatg 366  Q
    ||||||||||||||||||||||||||||||    
T  53654959 tttattactccctccgtcccaaattgtatg 53654988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 8096892 - 8096856
Alignment:
Q  337 tttattactccctccgtcccaaattgtatgtcacttt 373  Q
    |||| |||||||||||||||||||| |||||||||||    
T  8096892 tttagtactccctccgtcccaaattatatgtcacttt 8096856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 410
Target Start/End: Original strand, 30358758 - 30358786
Alignment:
Q  382 tatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||||    
T  30358758 tatttgtcccaaattgtatgtcgctttac 30358786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 368
Target Start/End: Original strand, 32078016 - 32078044
Alignment:
Q  340 attactccctccgtcccaaattgtatgtc 368  Q
    |||||||||||||||||||||||||||||    
T  32078016 attactccctccgtcccaaattgtatgtc 32078044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 16010916 - 16010984
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  16010916 tactccctccgtcccaaattgtatgtcactttagaacaaatatttgtcccaaattgtatgtcgctttac 16010984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 32145353 - 32145421
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  32145353 tactccctccgtcccaaattgtatgtcactttggaaaaaatatttgtcccaaattgtatgtcgctttac 32145421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 410
Target Start/End: Original strand, 4226234 - 4226307
Alignment:
Q  337 tttattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||||||||||||        ||||||||||||||| |||||| ||||||    
T  4226234 tttattactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcactttac 4226307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 4750481 - 4750413
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||| ||||||    
T  4750481 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcactttac 4750413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 6921011 - 6920943
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||||    
T  6921011 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcgctttac 6920943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 341 - 409
Target Start/End: Complemental strand, 8712160 - 8712092
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    |||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||    
T  8712160 ttactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcacttta 8712092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 18127334 - 18127402
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||||    
T  18127334 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcgctttac 18127402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 31045624 - 31045556
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||| |||||||||||        |||||||||||||||||||||||||||||    
T  31045624 tactccctccgtcccaaattttatgtcactttagaaaaaatatttgtcccaaattgtatgtcgctttac 31045556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 34967612 - 34967544
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||| |||||        |||||||||||||||||||||||||||||    
T  34967612 tactccctccgtcccaaattgtatgttactttagaaaaaatatttgtcccaaattgtatgtcgctttac 34967544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 38238866 - 38238934
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||||    
T  38238866 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcgctttac 38238934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 409
Target Start/End: Complemental strand, 3552841 - 3552774
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||    
T  3552841 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcacttta 3552774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 24583829 - 24583896
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||    
T  24583829 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcacttta 24583896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 24589498 - 24589565
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||    
T  24589498 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcacttta 24589565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 410
Target Start/End: Original strand, 28011064 - 28011135
Alignment:
Q  339 tattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||||| ||||         ||||||||||||||||||||||||||||    
T  28011064 tattactccctccgtcccaaattgtatgtcgctttagggaaaaaatttgtcccaaattgtatgtcgctttac 28011135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 39282532 - 39282599
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||    
T  39282532 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcacttta 39282599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 410
Target Start/End: Original strand, 19010772 - 19010845
Alignment:
Q  337 tttattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||| |||||||        ||||||||||||||| ||||||| |||||    
T  19010772 tttattactccctccgtcccaaattgtatatcactttagaaaaaatatttgtcccaaattatatgtcgatttac 19010845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 34347274 - 34347339
Alignment:
Q  345 tccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||||    
T  34347274 tccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcgctttac 34347339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 410
Target Start/End: Original strand, 50324826 - 50324895
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||| |||||||||||||        ||||||| |||||||||||||||||||||    
T  50324826 ttactccctccgtcccaaaatgtatgtcactttagaaaaaatatttgttccaaattgtatgtcgctttac 50324895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 409
Target Start/End: Complemental strand, 26333565 - 26333498
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    |||||||||||||||||||||||||||||||         |||||||||||||||||||||| |||||    
T  26333565 tactccctccgtcccaaattgtatgtcacttaaaaaaaaatatttgtcccaaattgtatgtcacttta 26333498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 32557929 - 32557963
Alignment:
Q  339 tattactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||||||||||||||||||||||||||||    
T  32557929 tattactccctccgtcccaaattgtatgtcacttt 32557963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 410
Target Start/End: Original strand, 42643110 - 42643176
Alignment:
Q  344 ctccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||        ||||||||| ||||| |||||||||||||    
T  42643110 ctccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcctaaattatatgtcgctttac 42643176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 340 - 409
Target Start/End: Original strand, 16705292 - 16705361
Alignment:
Q  340 attactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    |||||||||||||| |||||||||||||||||||        |||||||| ||||||||||||| |||||    
T  16705292 attactccctccgttccaaattgtatgtcactttagaaaaaatatttgtctcaaattgtatgtcacttta 16705361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 23827363 - 23827396
Alignment:
Q  340 attactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||||||||||||||||||||||||||||||||    
T  23827363 attactccctccgtcccaaattgtatgtcacttt 23827396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 403
Target Start/End: Original strand, 29672303 - 29672364
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtc 403  Q
    ||||||||||||||||||||||||||||||||        |||||||| |||||||||||||    
T  29672303 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtctcaaattgtatgtc 29672364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 409
Target Start/End: Complemental strand, 22172711 - 22172643
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||| |||||||||||||||||||||        ||||||| |||||||||||||| |||||    
T  22172711 ttactccctccatcccaaattgtatgtcactttaaaaaaaatatttgttccaaattgtatgtcacttta 22172643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 41529109 - 41529177
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||||| | ||||| |||||||||||||    
T  41529109 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgttcgaaattatatgtcgctttac 41529177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 49251846 - 49251778
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||| ||||| || ||||||    
T  49251846 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaaatgtatctcactttac 49251778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 366
Target Start/End: Complemental strand, 3550284 - 3550249
Alignment:
Q  331 attctatttattactccctccgtcccaaattgtatg 366  Q
    ||||||| ||||||||||||||||||||||||||||    
T  3550284 attctatatattactccctccgtcccaaattgtatg 3550249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 373
Target Start/End: Original strand, 16436055 - 16436086
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||||||||||||||||||||||||||||||    
T  16436055 tactccctccgtcccaaattgtatgtcacttt 16436086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 368
Target Start/End: Complemental strand, 23549490 - 23549459
Alignment:
Q  337 tttattactccctccgtcccaaattgtatgtc 368  Q
    ||||||||||||||||||||||||||||||||    
T  23549490 tttattactccctccgtcccaaattgtatgtc 23549459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 373
Target Start/End: Original strand, 23624839 - 23624870
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||||||||||||||||||||||||||||||    
T  23624839 tactccctccgtcccaaattgtatgtcacttt 23624870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 373
Target Start/End: Original strand, 50942619 - 50942650
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||||||||||||||||||||||||||||||    
T  50942619 tactccctccgtcccaaattgtatgtcacttt 50942650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 368
Target Start/End: Complemental strand, 2619632 - 2619602
Alignment:
Q  338 ttattactccctccgtcccaaattgtatgtc 368  Q
    |||||||||||||||||||||||||||||||    
T  2619632 ttattactccctccgtcccaaattgtatgtc 2619602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 373
Target Start/End: Complemental strand, 26551760 - 26551723
Alignment:
Q  336 atttattactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  26551760 atttattactccttccgttccaaattgtatgtcacttt 26551723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 402
Target Start/End: Original strand, 30679272 - 30679333
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgt 402  Q
    ||||||||||||||||||| |||||||||||||        |||||||| ||||||||||||    
T  30679272 ttactccctccgtcccaaaatgtatgtcactttagaaaaaatatttgtctcaaattgtatgt 30679333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 368
Target Start/End: Complemental strand, 32049613 - 32049584
Alignment:
Q  339 tattactccctccgtcccaaattgtatgtc 368  Q
    ||||||||||||||||||||||||||||||    
T  32049613 tattactccctccgtcccaaattgtatgtc 32049584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 369
Target Start/End: Original strand, 44789263 - 44789295
Alignment:
Q  337 tttattactccctccgtcccaaattgtatgtca 369  Q
    |||| ||||||||||||||||||||||||||||    
T  44789263 tttactactccctccgtcccaaattgtatgtca 44789295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 410
Target Start/End: Original strand, 48355791 - 48355819
Alignment:
Q  382 tatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||||    
T  48355791 tatttgtcccaaattgtatgtcgctttac 48355819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Complemental strand, 51905879 - 51905847
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||||||||||||||||||||| ||||    
T  51905879 ttactccctccgtcccaaattgtatgtcgcttt 51905847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 369
Target Start/End: Original strand, 52177782 - 52177810
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtca 369  Q
    |||||||||||||||||||||||||||||    
T  52177782 ttactccctccgtcccaaattgtatgtca 52177810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 410
Target Start/End: Complemental strand, 18450212 - 18450143
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||    
T  18450212 ttactccctccgtcccaaattgtatgtcactttgaaaaaaaaatttgtcccaaattgtatgtcgctttac 18450143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 410
Target Start/End: Original strand, 30780055 - 30780124
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||||    
T  30780055 ttactccctccgtcccaaattgtatgtcactttacaaaaaatatttgtcccaaattatatgtcgctttac 30780124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 40171819 - 40171751
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||| ||||||    
T  40171819 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcactttac 40171751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 14527749 - 14527816
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||    
T  14527749 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcacttta 14527816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 409
Target Start/End: Complemental strand, 14943545 - 14943478
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||    
T  14943545 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcacttta 14943478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 410
Target Start/End: Complemental strand, 28787008 - 28786937
Alignment:
Q  339 tattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||||||||||        ||||||||| ||||| |||||||||||||    
T  28787008 tattactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcctaaattatatgtcgctttac 28786937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 40833468 - 40833535
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||    
T  40833468 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcacttta 40833535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 244
Target Start/End: Complemental strand, 8525676 - 8525568
Alignment:
Q  133 atctcaatactttgatactgctaatccatccatggtgcctttatttacacgcaatgcaggacctcttcatcaatgtgttgttaacaaagcttgttaattc 232  Q
    ||||||| |||||| | |||||||  ||||||||||||||||||| |||| ||| |||||||||||| ||   ||||||| | ||||||| ||||||||     
T  8525676 atctcaaaactttgttgctgctaaggcatccatggtgcctttattaacactcaacgcaggacctcttgat---tgtgttgctgacaaagcatgttaattt 8525580  T
Q  233 aaccaaacattt 244  Q
     |||||| ||||    
T  8525579 caccaaatattt 8525568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 342 - 403
Target Start/End: Original strand, 19002905 - 19002966
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtc 403  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||||||||||    
T  19002905 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtc 19002966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 325413 - 325345
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||| |||||| |||||||||||||    
T  325413 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtctcaaattatatgtcgctttac 325345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 22060979 - 22061047
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||| |||||| ||||||    
T  22060979 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcactttac 22061047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 409
Target Start/End: Original strand, 39407771 - 39407843
Alignment:
Q  337 tttattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    |||| ||||||||||||||||||||||||||||||||        ||||||||| |||||||||||| |||||    
T  39407771 tttaatactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcctaaattgtatgtcacttta 39407843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 39927772 - 39927704
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||         ||||||||||||||||||||| ||||||    
T  39927772 tactccctccgtcccaaattgtatgtcactttagaaaaaagatttgtcccaaattgtatgtcactttac 39927704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 41095925 - 41095993
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||||||         ||||||||||||||||||||| |||||||    
T  41095925 tactccctccgtcccaaattgtatgtcacttaggaaaaaatatttgtcccaaattgtatgttgctttac 41095993  T

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Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 13375311 - 13375378
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||        ||||||||| |||||||||||| |||||    
T  13375311 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcctaaattgtatgtcacttta 13375378  T

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Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 410
Target Start/End: Original strand, 38959733 - 38959803
Alignment:
Q  340 attactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||| ||||         |||||||||||||| |||||||||||||    
T  38959733 attactccctccgtcccaaattgtatgtcgctttggaaaaaaaatttgtcccaaattatatgtcgctttac 38959803  T

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Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 410
Target Start/End: Original strand, 10877303 - 10877372
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||| ||||||||||||||||||||||||||||        ||||| ||| |||||||||||||||||||    
T  10877303 ttaccccctccgtcccaaattgtatgtcactttagaaaaaatatttatcctaaattgtatgtcgctttac 10877372  T

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Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 410
Target Start/End: Original strand, 12363619 - 12363688
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||| ||||||||||         | ||||||||||||||||||||||||||    
T  12363619 ttactccctccgtcccaaattgcatgtcactttggaaaaaaaaattgtcccaaattgtatgtcgctttac 12363688  T

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Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 410
Target Start/End: Original strand, 15848624 - 15848693
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||||||||         | |||||| |||||||||||||||||||    
T  15848624 ttactccctccgtcccaaattgtatgtcactttggaaaaaaaaattgtcctaaattgtatgtcgctttac 15848693  T

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Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 34036097 - 34036166
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnn-tatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||| |||||||||||||||||         |||||||||||||||||||||||||||||    
T  34036097 tactccctccgtcctaaattgtatgtcactttaaaaaaaaatatttgtcccaaattgtatgtcgctttac 34036166  T

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Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 35669689 - 35669754
Alignment:
Q  345 tccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||||         |||||||||||||| |||||||||||||    
T  35669689 tccctccgtcccaaattgtatgtcactttagaaaaaaaatttgtcccaaattatatgtcgctttac 35669754  T

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Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 336 - 373
Target Start/End: Original strand, 40171824 - 40171861
Alignment:
Q  336 atttattactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||| |||||||||||||||||||||||||||    
T  40171824 atttattacttcctccgtcccaaattgtatgtcacttt 40171861  T

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Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 3628666 - 3628606
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgt 402  Q
    ||||||||||||||||||||||||||||||||        ||||||||| |||||||||||    
T  3628666 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcctaaattgtatgt 3628606  T

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Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 36443513 - 36443581
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    ||||||||||||||||||||||||||||||||        |||||||| |||||| || ||||||||||    
T  36443513 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtctcaaattatacgtcgctttac 36443581  T

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Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 373
Target Start/End: Original strand, 42056035 - 42056067
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||||||||||||||||||||||||||    
T  42056035 ttactccctccgtcccaaattgtatgtcacttt 42056067  T

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Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 373
Target Start/End: Original strand, 27244921 - 27244952
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||||||||||||||||||||||||||||||    
T  27244921 tactccctccgtcccaaattgtatgtcacttt 27244952  T

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Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 373
Target Start/End: Complemental strand, 31909859 - 31909828
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||||||||||||||||||||||||||||||    
T  31909859 tactccctccgtcccaaattgtatgtcacttt 31909828  T

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Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 410
Target Start/End: Complemental strand, 3873694 - 3873624
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcacttt-nnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||| ||||         ||||||||||||||| |||||||||||||    
T  3873694 ttactccctccgtcccaaattgtatgtcgctttagggaaaaatatttgtcccaaattatatgtcgctttac 3873624  T

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Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 410
Target Start/End: Original strand, 16198387 - 16198460
Alignment:
Q  337 tttattactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||| ||||||||||||||||||||||||||| ||||         |||| ||||||||| |||||||||||||    
T  16198387 tttaatactccctccgtcccaaattgtatgtcgctttggaaaaaaaatttatcccaaattatatgtcgctttac 16198460  T

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Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 410
Target Start/End: Original strand, 21288850 - 21288919
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||| ||||         |||||||| ||||| |||||||||||||    
T  21288850 ttactccctccgtcccaaattgtatgtcgctttgaaaaaaaaatttgtcctaaattatatgtcgctttac 21288919  T

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Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 29026966 - 29026999
Alignment:
Q  340 attactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||||||||||||||||||||||||||| ||||    
T  29026966 attactccctccgtcccaaattgtatgtcgcttt 29026999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 44653709 - 44653644
Alignment:
Q  345 tccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||||        ||||||||||||||| ||| | |||||||    
T  44653709 tccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatattgctttac 44653644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Complemental strand, 1667042 - 1667010
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||||||||||||||||||||| ||||    
T  1667042 ttactccctccgtcccaaattgtatgtcgcttt 1667010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Original strand, 8495277 - 8495309
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||||||||||||||||||||| ||||    
T  8495277 ttactccctccgtcccaaattgtatgtcgcttt 8495309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Original strand, 17399760 - 17399792
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||||||||||||||||||||| ||||    
T  17399760 ttactccctccgtcccaaattgtatgtcgcttt 17399792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 373
Target Start/End: Original strand, 23494444 - 23494472
Alignment:
Q  345 tccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||||||||||||||||||||||    
T  23494444 tccctccgtcccaaattgtatgtcacttt 23494472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Complemental strand, 32068499 - 32068467
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||||||||||||||||||||| ||||    
T  32068499 ttactccctccgtcccaaattgtatgtcgcttt 32068467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Complemental strand, 40425244 - 40425212
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||||||||||||||||||||| ||||    
T  40425244 ttactccctccgtcccaaattgtatgtcgcttt 40425212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Complemental strand, 43521675 - 43521643
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||||||||||||||||||||| ||||    
T  43521675 ttactccctccgtcccaaattgtatgtcgcttt 43521643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 409
Target Start/End: Complemental strand, 26042 - 25975
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||| |||||    
T  26042 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattgtatgtcacttta 25975  T

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Target: scaffold0011 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 63344 - 63412
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||| ||||||||| |||        |||||||||||||||||||||||||||||    
T  63344 tactccctccgtcccaaaatgtatgtcattttagaaaaaatatttgtcccaaattgtatgtcgctttac 63412  T

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Target: scaffold0037 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 98862 - 98929
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgcttta 409  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||| |||||| |||||    
T  98862 tactccctccgtcccaaattgtatgtcactttagaaaaaatatttgtcccaaattatatgtcacttta 98929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 373
Target Start/End: Complemental strand, 18961 - 18930
Alignment:
Q  342 tactccctccgtcccaaattgtatgtcacttt 373  Q
    ||||||||||||||||||||||||||||||||    
T  18961 tactccctccgtcccaaattgtatgtcacttt 18930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 410
Target Start/End: Original strand, 8436 - 8504
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcactttnnnnnnnntatttgtcccaaattgtatgtcgctttac 410  Q
    |||||||||||||||||||||||||||| ||||         |||||||||||||| |||||||||||||    
T  8436 ttactccctccgtcccaaattgtatgtcgctttggaaaaaa-atttgtcccaaattatatgtcgctttac 8504  T

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Target: scaffold0444 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Original strand, 7594 - 7626
Alignment:
Q  341 ttactccctccgtcccaaattgtatgtcacttt 373  Q
    |||||||||||||||||||||||||||| ||||    
T  7594 ttactccctccgtcccaaattgtatgtcgcttt 7626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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