View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13260_low_14 (Length: 369)

Name: NF13260_low_14
Description: NF13260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13260_low_14
NF13260_low_14
[»] chr7 (37 HSPs)
chr7 (1-354)||(41047548-41047893)
chr7 (1-183)||(30355196-30355379)
chr7 (1-182)||(28980129-28980312)
chr7 (1-183)||(46863301-46863484)
chr7 (46-185)||(48314605-48314744)
chr7 (51-183)||(41049196-41049328)
chr7 (44-182)||(37340236-37340375)
chr7 (48-184)||(9494810-9494947)
chr7 (44-183)||(47060860-47060999)
chr7 (44-182)||(19044228-19044366)
chr7 (44-182)||(20710270-20710408)
chr7 (99-182)||(48269615-48269698)
chr7 (73-182)||(21185553-21185663)
chr7 (1-58)||(43686864-43686921)
chr7 (5-85)||(36394899-36394979)
chr7 (1-85)||(42682026-42682110)
chr7 (1-56)||(21188383-21188438)
chr7 (50-182)||(34622433-34622566)
chr7 (38-170)||(46860457-46860590)
chr7 (44-84)||(17834520-17834560)
chr7 (44-122)||(47776327-47776405)
chr7 (44-85)||(9367724-9367765)
chr7 (44-179)||(10705185-10705321)
chr7 (1-85)||(17838682-17838767)
chr7 (44-85)||(17840890-17840931)
chr7 (48-85)||(29592575-29592612)
chr7 (44-85)||(38555413-38555454)
chr7 (44-85)||(42499441-42499482)
chr7 (1-30)||(48316266-48316295)
chr7 (44-92)||(14102348-14102396)
chr7 (44-92)||(14412365-14412413)
chr7 (44-84)||(15070388-15070428)
chr7 (44-84)||(18105406-18105446)
chr7 (44-84)||(35606822-35606862)
chr7 (1-85)||(40587693-40587777)
chr7 (44-84)||(42795113-42795153)
chr7 (44-84)||(45767861-45767901)
[»] chr3 (61 HSPs)
chr3 (1-171)||(13896833-13897004)
chr3 (1-171)||(52570523-52570693)
chr3 (1-139)||(41802975-41803114)
chr3 (1-183)||(41577008-41577191)
chr3 (39-182)||(7247855-7247999)
chr3 (39-182)||(41579719-41579863)
chr3 (1-182)||(51402355-51402537)
chr3 (1-120)||(55207620-55207739)
chr3 (1-85)||(55385169-55385253)
chr3 (44-182)||(52567697-52567836)
chr3 (51-184)||(41805682-41805816)
chr3 (39-182)||(2432938-2433082)
chr3 (44-171)||(19440201-19440329)
chr3 (44-179)||(29929363-29929499)
chr3 (44-179)||(29978517-29978653)
chr3 (1-85)||(43476224-43476308)
chr3 (51-182)||(46344871-46345003)
chr3 (3-90)||(24703374-24703461)
chr3 (39-179)||(28611095-28611236)
chr3 (1-85)||(34694391-34694475)
chr3 (1-56)||(19454308-19454363)
chr3 (38-179)||(43571679-43571821)
chr3 (7-179)||(45101811-45101984)
chr3 (44-179)||(29918341-29918477)
chr3 (44-179)||(29967494-29967630)
chr3 (44-124)||(34691618-34691698)
chr3 (1-61)||(51696531-51696591)
chr3 (73-182)||(19454354-19454464)
chr3 (44-184)||(43478830-43478971)
chr3 (1-85)||(4004759-4004844)
chr3 (44-85)||(7941142-7941183)
chr3 (1-85)||(36134355-36134440)
chr3 (107-179)||(42807663-42807736)
chr3 (2-95)||(46347679-46347772)
chr3 (44-124)||(13747719-13747798)
chr3 (44-92)||(14043898-14043946)
chr3 (45-92)||(19842529-19842576)
chr3 (44-122)||(2743393-2743471)
chr3 (1-31)||(41137794-41137824)
chr3 (43-101)||(50122395-50122453)
chr3 (44-82)||(52387833-52387871)
chr3 (77-182)||(55267375-55267481)
chr3 (44-85)||(2647699-2647740)
chr3 (44-129)||(4002505-4002590)
chr3 (44-85)||(6143703-6143744)
chr3 (1-54)||(7245155-7245208)
chr3 (44-85)||(16484456-16484497)
chr3 (1-30)||(18436766-18436795)
chr3 (1-118)||(20366191-20366308)
chr3 (44-85)||(34049112-34049153)
chr3 (44-85)||(49268845-49268886)
chr3 (44-85)||(54389827-54389868)
chr3 (44-84)||(30943222-30943262)
chr3 (44-84)||(35743582-35743622)
chr3 (44-84)||(41844182-41844222)
chr3 (44-84)||(41844364-41844404)
chr3 (44-84)||(42166410-42166450)
chr3 (44-84)||(46697744-46697784)
chr3 (44-84)||(49144456-49144496)
chr3 (1-85)||(49219748-49219832)
chr3 (44-84)||(50477213-50477253)
[»] chr5 (29 HSPs)
chr5 (6-182)||(20192287-20192464)
chr5 (39-182)||(3603143-3603287)
chr5 (1-139)||(18307231-18307370)
chr5 (44-183)||(20200148-20200288)
chr5 (39-179)||(18538330-18538471)
chr5 (1-183)||(3600269-3600453)
chr5 (73-184)||(18310050-18310162)
chr5 (1-85)||(25497543-25497627)
chr5 (1-85)||(11346039-11346124)
chr5 (107-171)||(35567090-35567155)
chr5 (1-61)||(542747-542807)
chr5 (44-139)||(41798795-41798891)
chr5 (48-179)||(1398541-1398673)
chr5 (48-146)||(8702202-8702301)
chr5 (44-179)||(34682194-34682330)
chr5 (1-61)||(35564317-35564377)
chr5 (44-182)||(25877556-25877694)
chr5 (1-56)||(42865761-42865816)
chr5 (47-85)||(41799770-41799808)
chr5 (44-85)||(19037470-19037511)
chr5 (43-84)||(21058496-21058537)
chr5 (44-85)||(28388519-28388560)
chr5 (38-95)||(41201750-41201807)
chr5 (46-102)||(42539375-42539432)
chr5 (44-84)||(8577007-8577047)
chr5 (44-84)||(13837757-13837797)
chr5 (44-84)||(28238172-28238212)
chr5 (44-120)||(34122521-34122597)
chr5 (44-84)||(35281839-35281879)
[»] chr4 (45 HSPs)
chr4 (10-179)||(29700268-29700438)
chr4 (38-183)||(49572894-49573040)
chr4 (1-171)||(958551-958721)
chr4 (39-179)||(37959715-37959856)
chr4 (1-184)||(44561287-44561471)
chr4 (1-85)||(56138284-56138368)
chr4 (38-171)||(955737-955871)
chr4 (44-185)||(44051092-44051234)
chr4 (6-85)||(4786296-4786375)
chr4 (48-182)||(6280791-6280926)
chr4 (2-85)||(1041967-1042050)
chr4 (44-182)||(4979917-4980056)
chr4 (1-92)||(42885474-42885567)
chr4 (64-179)||(21472504-21472620)
chr4 (1-56)||(56304911-56304966)
chr4 (44-122)||(9889989-9890067)
chr4 (40-85)||(4783678-4783723)
chr4 (44-85)||(20209327-20209368)
chr4 (44-89)||(21015767-21015812)
chr4 (44-111)||(48256568-48256635)
chr4 (38-179)||(51426474-51426616)
chr4 (106-184)||(4768610-4768689)
chr4 (1-56)||(34530752-34530807)
chr4 (1-56)||(39588127-39588182)
chr4 (39-85)||(11494575-11494621)
chr4 (44-122)||(15995717-15995795)
chr4 (44-122)||(19069182-19069260)
chr4 (38-92)||(34151639-34151693)
chr4 (46-84)||(37015931-37015969)
chr4 (43-85)||(39590567-39590609)
chr4 (47-85)||(48807389-48807427)
chr4 (44-85)||(6178110-6178151)
chr4 (44-117)||(17342142-17342215)
chr4 (44-85)||(21022888-21022929)
chr4 (44-85)||(41023418-41023459)
chr4 (44-85)||(49094116-49094157)
chr4 (44-84)||(21018067-21018107)
chr4 (44-84)||(30726741-30726781)
chr4 (44-84)||(31425318-31425358)
chr4 (44-84)||(37563280-37563320)
chr4 (44-84)||(39773437-39773477)
chr4 (44-84)||(40354638-40354678)
chr4 (44-84)||(40358280-40358320)
chr4 (44-92)||(45971759-45971807)
chr4 (44-84)||(54634015-54634055)
[»] chr8 (35 HSPs)
chr8 (1-184)||(18441398-18441582)
chr8 (39-184)||(18438566-18438712)
chr8 (1-182)||(41858080-41858260)
chr8 (1-84)||(41274625-41274708)
chr8 (44-122)||(42605234-42605312)
chr8 (1-82)||(26451515-26451596)
chr8 (44-139)||(41855345-41855441)
chr8 (1-120)||(42602457-42602576)
chr8 (44-179)||(7168025-7168161)
chr8 (44-147)||(22577634-22577738)
chr8 (46-169)||(38872932-38873056)
chr8 (73-171)||(3395837-3395936)
chr8 (39-122)||(18205781-18205864)
chr8 (44-184)||(34823016-34823157)
chr8 (44-85)||(7121786-7121827)
chr8 (44-117)||(28646247-28646320)
chr8 (44-117)||(28650831-28650904)
chr8 (44-85)||(43262453-43262494)
chr8 (44-92)||(43520776-43520824)
chr8 (73-184)||(45454338-45454450)
chr8 (1-56)||(22547504-22547559)
chr8 (44-122)||(21406262-21406340)
chr8 (44-122)||(21800754-21800832)
chr8 (44-85)||(22550865-22550906)
chr8 (44-85)||(34892809-34892850)
chr8 (44-85)||(40077250-40077291)
chr8 (44-85)||(40740938-40740979)
chr8 (44-85)||(41016446-41016487)
chr8 (44-84)||(184552-184592)
chr8 (44-84)||(8419437-8419477)
chr8 (44-84)||(26663033-26663073)
chr8 (49-85)||(29034081-29034117)
chr8 (44-84)||(32375684-32375724)
chr8 (44-92)||(32383205-32383253)
chr8 (44-92)||(32437160-32437208)
[»] chr1 (55 HSPs)
chr1 (39-182)||(46141716-46141860)
chr1 (39-182)||(18975115-18975259)
chr1 (39-182)||(6437534-6437678)
chr1 (38-185)||(41804027-41804175)
chr1 (1-183)||(13971997-13972178)
chr1 (1-92)||(6434773-6434864)
chr1 (1-67)||(29763176-29763242)
chr1 (38-179)||(26633467-26633606)
chr1 (44-179)||(36072307-36072442)
chr1 (1-61)||(42572714-42572774)
chr1 (1-159)||(29434930-29435088)
chr1 (44-182)||(49924790-49924929)
chr1 (47-160)||(19499115-19499227)
chr1 (44-139)||(13178132-13178228)
chr1 (77-184)||(35521546-35521654)
chr1 (124-183)||(1872041-1872100)
chr1 (48-185)||(11183117-11183255)
chr1 (1-120)||(24364682-24364801)
chr1 (1-56)||(27487623-27487678)
chr1 (39-185)||(46973135-46973281)
chr1 (6-61)||(49395659-49395714)
chr1 (48-182)||(49927517-49927652)
chr1 (44-122)||(6557910-6557988)
chr1 (74-171)||(35527043-35527141)
chr1 (39-179)||(13173773-13173913)
chr1 (44-121)||(52802126-52802203)
chr1 (44-84)||(20353935-20353975)
chr1 (44-92)||(29425336-29425384)
chr1 (73-184)||(36908510-36908622)
chr1 (44-92)||(46217318-46217366)
chr1 (1-56)||(14174868-14174923)
chr1 (44-182)||(29438020-29438159)
chr1 (44-122)||(6562161-6562239)
chr1 (1-31)||(26637213-26637243)
chr1 (48-148)||(29261382-29261483)
chr1 (44-90)||(44336276-44336322)
chr1 (44-122)||(44470011-44470089)
chr1 (1-31)||(49927458-49927488)
chr1 (44-85)||(3941150-3941191)
chr1 (44-85)||(9710610-9710651)
chr1 (44-85)||(13636122-13636163)
chr1 (44-97)||(19054250-19054303)
chr1 (44-85)||(29424412-29424453)
chr1 (47-84)||(38127493-38127530)
chr1 (44-85)||(44598906-44598947)
chr1 (44-84)||(3728768-3728808)
chr1 (44-92)||(3939979-3940027)
chr1 (44-84)||(3944007-3944047)
chr1 (44-84)||(3993843-3993883)
chr1 (44-84)||(8548669-8548709)
chr1 (1-85)||(13147528-13147612)
chr1 (126-182)||(35181331-35181387)
chr1 (44-92)||(46216423-46216471)
chr1 (43-122)||(51289959-51290038)
chr1 (152-188)||(51291693-51291729)
[»] chr6 (37 HSPs)
chr6 (1-160)||(12783914-12784074)
chr6 (47-184)||(2050961-2051098)
chr6 (1-122)||(13401481-13401602)
chr6 (63-184)||(29286161-29286283)
chr6 (39-181)||(13404627-13404770)
chr6 (44-182)||(18605979-18606117)
chr6 (50-182)||(7361125-7361258)
chr6 (44-179)||(23958827-23958963)
chr6 (44-85)||(29076323-29076364)
chr6 (44-85)||(29097828-29097869)
chr6 (44-85)||(29109856-29109897)
chr6 (44-85)||(29111296-29111337)
chr6 (48-92)||(11157735-11157779)
chr6 (106-173)||(34801480-34801548)
chr6 (49-92)||(14124723-14124766)
chr6 (107-183)||(25141142-25141219)
chr6 (44-122)||(31768748-31768826)
chr6 (1-56)||(32034349-32034404)
chr6 (46-124)||(32643523-32643601)
chr6 (1-31)||(26855981-26856011)
chr6 (50-92)||(32222554-32222596)
chr6 (44-85)||(6204859-6204900)
chr6 (44-85)||(9048107-9048148)
chr6 (44-85)||(9049084-9049125)
chr6 (44-85)||(11691826-11691867)
chr6 (48-85)||(13616272-13616309)
chr6 (44-85)||(22305140-22305181)
chr6 (44-92)||(2110455-2110503)
chr6 (107-146)||(6320552-6320592)
chr6 (44-84)||(13382662-13382702)
chr6 (44-84)||(17597524-17597564)
chr6 (44-84)||(18351643-18351683)
chr6 (108-171)||(26701797-26701861)
chr6 (44-84)||(26712081-26712121)
chr6 (44-84)||(27616748-27616788)
chr6 (44-84)||(28249918-28249958)
chr6 (44-92)||(32223513-32223561)
[»] chr2 (38 HSPs)
chr2 (44-171)||(35490625-35490753)
chr2 (1-116)||(43491110-43491225)
chr2 (1-182)||(24512101-24512283)
chr2 (38-186)||(35493335-35493484)
chr2 (38-184)||(2917615-2917762)
chr2 (1-85)||(41500191-41500275)
chr2 (44-182)||(25184830-25184968)
chr2 (39-139)||(34921754-34921854)
chr2 (44-184)||(41008928-41009068)
chr2 (1-61)||(2920473-2920533)
chr2 (63-182)||(41181371-41181491)
chr2 (44-181)||(41004464-41004601)
chr2 (49-182)||(41497406-41497540)
chr2 (39-171)||(45475385-45475518)
chr2 (1-82)||(2648152-2648233)
chr2 (43-124)||(45137432-45137513)
chr2 (44-131)||(7189951-7190038)
chr2 (44-122)||(34639314-34639392)
chr2 (1-95)||(10365749-10365843)
chr2 (44-160)||(19187223-19187340)
chr2 (1-67)||(39393087-39393153)
chr2 (44-182)||(43943627-43943762)
chr2 (8-85)||(29093792-29093869)
chr2 (48-85)||(30271106-30271143)
chr2 (1-120)||(34638138-34638253)
chr2 (73-184)||(24607597-24607709)
chr2 (44-126)||(33222607-33222689)
chr2 (93-186)||(41052611-41052705)
chr2 (44-122)||(41183224-41183301)
chr2 (110-182)||(16580479-16580552)
chr2 (44-85)||(17424164-17424205)
chr2 (44-85)||(26543989-26544030)
chr2 (47-84)||(39947632-39947669)
chr2 (44-85)||(43982231-43982272)
chr2 (44-84)||(22003401-22003441)
chr2 (44-179)||(28342460-28342596)
chr2 (44-84)||(28468674-28468714)
chr2 (98-126)||(39951204-39951232)
[»] scaffold0199 (1 HSPs)
scaffold0199 (1-85)||(12344-12429)
[»] scaffold0618 (1 HSPs)
scaffold0618 (51-182)||(3820-3951)
[»] scaffold0201 (1 HSPs)
scaffold0201 (44-122)||(22398-22476)
[»] scaffold1379 (1 HSPs)
scaffold1379 (44-182)||(434-573)
[»] scaffold0513 (1 HSPs)
scaffold0513 (46-124)||(8192-8270)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-61)||(18856-18916)
[»] scaffold0340 (1 HSPs)
scaffold0340 (44-170)||(1181-1307)
[»] scaffold0794 (1 HSPs)
scaffold0794 (44-122)||(5267-5344)
[»] scaffold0494 (2 HSPs)
scaffold0494 (44-122)||(826-904)
scaffold0494 (44-84)||(5364-5404)
[»] scaffold0341 (1 HSPs)
scaffold0341 (44-122)||(17351-17429)
[»] scaffold0011 (1 HSPs)
scaffold0011 (44-82)||(236234-236272)
[»] scaffold0744 (1 HSPs)
scaffold0744 (44-84)||(423-463)
[»] scaffold0065 (1 HSPs)
scaffold0065 (44-92)||(65343-65391)
[»] scaffold0038 (1 HSPs)
scaffold0038 (44-84)||(50080-50120)
[»] scaffold0019 (1 HSPs)
scaffold0019 (44-92)||(127526-127574)


Alignment Details
Target: chr7 (Bit Score: 178; Significance: 6e-96; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 1 - 354
Target Start/End: Complemental strand, 41047893 - 41047548
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaattt 100  Q
    |||||||||||||||||||  |||||||||| | |||| ||  ||||||||||||||||||||||||| || |||||||||| |||||||||||||| ||    
T  41047893 taatggatgagagagcttcctccagatttgtagcagaagatcctcggcagttaactaccgaagttttcctcggcagttaactacacccgattattaaatt 41047794  T
Q  101 cttctgcagttaactgccgaggagcaaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctcttctatctatctaatttc 200  Q
    ||||||||||||||| ||||| ||||||||  |||||||||| |||||||||||||||||||||||||||| |||||||||| || ||||||||||||||    
T  41047793 cttctgcagttaactaccgagaagcaaaaatgtattttatttatgtgccgcagtcttatgcaatgtgtcaacaacaattctc-tcaatctatctaatttc 41047695  T
Q  201 caagtcaaagggtgtgaagtgtgaattagcttaa-nnnnnnnaccgtagtatag-nnnnnnncttgttcgtagttggctgaaaaagtaaagaaaacaaca 298  Q
    ||||||||||||||||| ||||||||||||||||        ||||||||||||        |||||| |||||||||||||||||||||||||||||||    
T  41047694 caagtcaaagggtgtgacgtgtgaattagcttaattttttttaccgtagtatagttttttttcttgttggtagttggctgaaaaagtaaagaaaacaaca 41047595  T
Q  299 aaagtacaccaaagtgaccaaactaataaatagggaagcacccttgacgttgtact 354  Q
    |||||||         ||||||||||||||||||||||||||||||||||||||||    
T  41047594 aaagtac---------accaaactaataaatagggaagcacccttgacgttgtact 41047548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 30355196 - 30355379
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaattt 100  Q
    ||||||||||||||||||||||||||||||| | |||| ||  |||||||||||||||||| |||||| || ||||||||||||| |||||| || | ||    
T  30355196 taatggatgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgatttttgaatt 30355295  T
Q  101 cttctgcagttaactgccga-ggagcaaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctct 183  Q
    |||| ||| ||||||||||| || |||||| | ||||||| | ||||  | ||||| |||| |||||||||| |||||||||||    
T  30355296 cttcagcaattaactgccgagggggcaaaagcgtattttactcgtgtttctcagtcatatgaaatgtgtcaacaacaattctct 30355379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 28980129 - 28980312
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagtttt-catcagcagttaactgcacccgattattaatt 99  Q
    ||||||||||||||||||||| ||||||||| | |||||||  |||||||||||||||||| ||||| | || ||||||||||||| |||  |||| | |    
T  28980129 taatggatgagagagcttctgtcagatttgtagcagaaaatcctcggcagttaactaccgaggttttccttcggcagttaactgcatccggatattgaat 28980228  T
Q  100 tcttctgcagttaactgccga-ggagcaaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
    ||||| |||| ||||||| || || |||||||| ||||||| | ||||| | ||| ||||||||||||||||| ||||||||||    
T  28980229 tcttcggcagctaactgctgagggggcaaaaacgtattttactcgtgtgtctcagccttatgcaatgtgtcaacaacaattctc 28980312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 46863301 - 46863484
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattatt-aatt 99  Q
    |||||||||| |||||||||||||||||||| | |||| ||  ||||||||||||||| ||  ||||| |  ||||||||||||| ||| || || ||||    
T  46863301 taatggatgaaagagcttctgccagatttgtagcagaagatcttcggcagttaactacagagattttcgttcgcagttaactgcagccggtttttcaatt 46863400  T
Q  100 tcttctgcagttaactgccga-ggagcaaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctct 183  Q
    || || ||||||||||||||| || |||||||| ||||||| ||||||| | ||| ||||||||||| ||||| |||||||||||    
T  46863401 tc-tcggcagttaactgccgatggggcaaaaacgtattttacttgtgtgtctcagccttatgcaatgcgtcaacaacaattctct 46863484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 46 - 185
Target Start/End: Complemental strand, 48314744 - 48314605
Alignment:
Q  46 ggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgaggagcaaaaacatattttatttgtg 145  Q
    ||||||||| |||||| |||||| || | ||||||||||| ||| ||||| | ||| || ||||||||||||||||| |||||||  ||||||| |||||    
T  48314744 ggcagttaagtaccgaggttttcgtcggtagttaactgcagccggttattgaattcctcggcagttaactgccgaggggcaaaaatgtattttacttgtg 48314645  T
Q  146 tgccgcagtcttatgcaatgtgtcaaaaacaattctcttc 185  Q
    | || ||  ||||||||||||||||| |||||||||||||    
T  48314644 tacctcaaccttatgcaatgtgtcaacaacaattctcttc 48314605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 51 - 183
Target Start/End: Original strand, 41049196 - 41049328
Alignment:
Q  51 ttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgaggagcaaaaacatattttatttgtgtgccg 150  Q
    ||||||||||| |||||| || ||||||||||||| ||||||||| | ||||||  ||||||||| |||| || ||||| | ||||||| || |||||      
T  41049196 ttaactaccgaggttttcctcggcagttaactgcagccgattattgaattcttcgacagttaactaccgaagaacaaaagcgtattttacttatgtgcat 41049295  T
Q  151 cagtcttatgcaatgtgtcaaaaacaattctct 183  Q
    ||| ||||||||||||||||| |||||||||||    
T  41049296 cagccttatgcaatgtgtcaacaacaattctct 41049328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 182
Target Start/End: Complemental strand, 37340375 - 37340236
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgaggag-caaaaacatattttattt 142  Q
    |||||||||||||||||| |||||  || ||||||||||||| ||| || || | ||| ||  |||||||||| ||| ||| ||||||| ||||||||||    
T  37340375 tcggcagttaactaccgaggtttttctcggcagttaactgcaaccggtttttgaattcctcgacagttaactgtcgaagagacaaaaacgtattttattt 37340276  T
Q  143 gtgtgccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
     ||||||  ||||||||| |||||||||| | ||||||||    
T  37340275 atgtgccttagtcttatgtaatgtgtcaacatcaattctc 37340236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 9494810 - 9494947
Alignment:
Q  48 cagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatattttatttgtgt 146  Q
    ||||||||| |||| |||||| || ||||||||||||| ||| || || | ||| || ||||||||||||||| || ||| | || ||||||| ||||||    
T  9494810 cagttaactcccgaggttttcctcggcagttaactgcagccggttttttaattcctcggcagttaactgccgagggggcatatacctattttacttgtgt 9494909  T
Q  147 gccgcagtcttatgcaatgtgtcaaaaacaattctctt 184  Q
    ||| ||| |||||| |||||||||| ||||||| ||||    
T  9494910 gcctcagccttatgaaatgtgtcaacaacaattttctt 9494947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 183
Target Start/End: Complemental strand, 47060999 - 47060860
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatattttattt 142  Q
    |||||||||||||||||| |||||| || |||||||||| || |||||| || | ||| ||  |||||||||||||| || |||||||| ||||||| ||    
T  47060999 tcggcagttaactaccgaggttttcctcggcagttaactacagccgatt-ttgaattcctcgacagttaactgccgagggggcaaaaacgtattttactt 47060901  T
Q  143 gtgtgccgcagtcttatgcaatgtgtcaaaaacaattctct 183  Q
    || |||| ||| |||||| ||| |||||| || ||||||||    
T  47060900 gtatgcctcagccttatgaaatatgtcaacaataattctct 47060860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 44 - 182
Target Start/End: Complemental strand, 19044366 - 19044228
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgag-gagcaaaaacatattttattt 142  Q
    ||||||||||||||||||||||||| || ||| |||||||||  || || | || ||| || ||| |||||||||||| || ||||||| ||||||| |     
T  19044366 tcggcagttaactaccgaagttttcctcggcaattaactgcagtcggtt-tcaaattcctcggcaattaactgccgagtgaacaaaaacgtattttactc 19044268  T
Q  143 gtgtgccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
     |||||| ||| ||||||||||||||||| || |||||||    
T  19044267 atgtgcctcagccttatgcaatgtgtcaacaataattctc 19044228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 44 - 182
Target Start/End: Original strand, 20710270 - 20710408
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgag-gagcaaaaacatattttattt 142  Q
    ||||||||||||||||||||||||| || ||| |||||||||  || || | || ||| || ||| |||||||||||| || ||||||| ||||||| |     
T  20710270 tcggcagttaactaccgaagttttcctcggcaattaactgcagtcggtt-tcaaattcctcggcaattaactgccgagtgaacaaaaacgtattttactc 20710368  T
Q  143 gtgtgccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
     |||||| ||| ||||||||||||||||| || |||||||    
T  20710369 atgtgcctcagccttatgcaatgtgtcaacaataattctc 20710408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 48269698 - 48269615
Alignment:
Q  99 ttcttctgcagttaactgccgaggagcaaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
    |||||| ||||||||||||||||  | |||||||||||||| ||||||||| ||| |||||  |||||||||| ||||||||||    
T  48269698 ttcttcggcagttaactgccgagagggaaaaacatattttacttgtgtgcctcagccttataaaatgtgtcaacaacaattctc 48269615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 182
Target Start/End: Complemental strand, 21185663 - 21185553
Alignment:
Q  73 gcagttaactgcacccgattattaatttcttctgcagttaactgccgagga-gcaaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaa 171  Q
    |||||||||| || ||| ||||| | |||||| |||||||||||||||||| |||||| | ||||||| || |||| | ||   ||||||||||||||||    
T  21185663 gcagttaactacagccggttattgaattcttcggcagttaactgccgaggaggcaaaatcgtattttacttatgtgtctcatcattatgcaatgtgtcaa 21185564  T
Q  172 aaacaattctc 182  Q
     ||||||||||    
T  21185563 caacaattctc 21185553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 43686864 - 43686921
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactac 58  Q
    |||||||||||||||||| || ||||||||| | |||||||| |||||||||||||||    
T  43686864 taatggatgagagagcttatgtcagatttgtagcagaaaattctcggcagttaactac 43686921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 36394899 - 36394979
Alignment:
Q  5 ggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||||||||||||||||| | |||| ||  |||| ||||||||||||| |||||| || ||| |||| ||||    
T  36394899 ggatgagagagcttctgccagatttgtagcagaagatcctcggtagttaactaccgaggttttcctcggcacttaattgca 36394979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 42682110 - 42682026
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||| ||| ||| |||||||| | |||| ||  ||||||||||| |||||| |||||| || |||||||||||||    
T  42682110 taatggatgagagaacttatgctagatttgtagcagaagatcctcggcagttaattaccgaggttttcctcggcagttaactgca 42682026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21188383 - 21188438
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaact 56  Q
    ||||||||||||||||||||||||||||||| | |||| ||  |||||||||||||    
T  21188383 taatggatgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 21188438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 182
Target Start/End: Complemental strand, 34622566 - 34622433
Alignment:
Q  50 gttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgaggag-caaaaacatattttatttgtgtgc 148  Q
    |||||||||||| | |||| ||  ||||||||||||  || ||  | | ||| |||||||||||||| | ||| | ||||||| ||  ||| ||||||||    
T  34622566 gttaactaccgaggatttcctcgacagttaactgcagtcggtttcttaattcctctgcagttaactgtcaagggggcaaaaacgtaaattacttgtgtgc 34622467  T
Q  149 cgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
    | ||| ||||||||||||||||| ||||||||||    
T  34622466 ctcagccttatgcaatgtgtcaacaacaattctc 34622433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 170
Target Start/End: Complemental strand, 46860590 - 46860457
Alignment:
Q  38 aaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatatt 136  Q
    ||||| ||||||||||||| |||| |||| | |||  |||||||||||  || || || | ||| ||  |||||||||||||| || |||||| | ||||    
T  46860590 aaattttcggcagttaactgccgaggtttgcctcaatagttaactgcagtcggtttttcaattcctcgacagttaactgccgagggggcaaaagcgtatt 46860491  T
Q  137 ttatttgtgtgccgcagtcttatgcaatgtgtca 170  Q
    ||| ||||||||| ||| |||||| |||||||||    
T  46860490 ttacttgtgtgcctcagccttatgtaatgtgtca 46860457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 17834560 - 17834520
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    ||||||||||||||||||||||||| || ||||||||||||    
T  17834560 tcggcagttaactaccgaagttttcctcggcagttaactgc 17834520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 47776405 - 47776327
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca-cccgattattaatttcttctgcagttaactgccgagg 122  Q
    ||||||||||| |||||| |||||| || ||||||||||||| || |||| |||||||| || ||||||||||| |||||    
T  47776405 tcggcagttaattaccgaggttttcctcggcagttaactgcagccagatttttaatttc-tcggcagttaactgtcgagg 47776327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 9367724 - 9367765
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||| |||||| || |||||||||||||    
T  9367724 tcggcagttaactaccgaggttttcctcggcagttaactgca 9367765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 179
Target Start/End: Complemental strand, 10705321 - 10705185
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattatt-aatttcttctgcagttaactgccga-ggagcaaaaacatattttatt 141  Q
    ||||||||||||| || | |||||  || ||||||||||||| |||||| || ||||||| | ||||||||||||| | || | |||||  ||||||| |    
T  10705321 tcggcagttaactcccaaggtttttctcggcagttaactgcagccgattttttaatttct-cggcagttaactgccaaggggggaaaaatgtattttact 10705223  T
Q  142 tgtgtgccgcagtcttatgcaatgtgtcaaaaacaatt 179  Q
    ||||||||  || |||||| ||| |||||| |||||||    
T  10705222 tgtgtgccttagccttatgaaatatgtcaataacaatt 10705185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 17838767 - 17838682
Alignment:
Q  1 taatggatgagag-agcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||| || ||||||||||||||| | |||| ||  |||||||||||||| ||| |||||| || | |||| ||||||    
T  17838767 taatggatgagaggagattctgccagatttgtagcagaagatcgtcggcagttaactatcgaggttttcctcggtagtttactgca 17838682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 17840890 - 17840931
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||| |||||| || |||||||||||||    
T  17840890 tcggcagttaactaccgaggttttcctcggcagttaactgca 17840931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 29592612 - 29592575
Alignment:
Q  48 cagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  29592612 cagttaactaccgaagttttcatcggcagttaattgca 29592575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 38555413 - 38555454
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||| ||||||||||| || |||||||||||||    
T  38555413 tcggcagttaactgccgaagttttcctcggcagttaactgca 38555454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 42499482 - 42499441
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||| |||||| || |||||||||||||    
T  42499482 tcggcagttaactaccgaggttttcctcggcagttaactgca 42499441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 48316266 - 48316295
Alignment:
Q  1 taatggatgagagagcttctgccagatttg 30  Q
    ||||||||||||||||||||||||||||||    
T  48316266 taatggatgagagagcttctgccagatttg 48316295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 14102348 - 14102396
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgatt 92  Q
    ||||||||||||| ||||||||||| || |||||||| |||| ||||||    
T  14102348 tcggcagttaactgccgaagttttcctcggcagttaattgcagccgatt 14102396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 14412365 - 14412413
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgatt 92  Q
    ||||||||||||| ||||||||||| || |||||||| |||| ||||||    
T  14412365 tcggcagttaactgccgaagttttcctcggcagttaattgcagccgatt 14412413  T

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Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 15070428 - 15070388
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  15070428 tcggcagttaactaccgaggttttcctcggcagttaactgc 15070388  T

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Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 18105446 - 18105406
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  18105446 tcggcagttaactaccgaggttttcctcggcagttaactgc 18105406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 35606862 - 35606822
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  35606862 tcggcagttaactaccgaggttttcctcggcagttaactgc 35606822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 40587777 - 40587693
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||||||||||  ||||||| | | | || ||  ||||||||||||||| || |||||| ||  ||||||||||||    
T  40587777 taatggatgagagagcttctttcagatttatagcataagatcctcggcagttaactactgaggttttcctcgacagttaactgca 40587693  T

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Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 42795113 - 42795153
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    ||||||||||||| ||||||||||| || ||||||||||||    
T  42795113 tcggcagttaactgccgaagttttcctcggcagttaactgc 42795153  T

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Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 45767861 - 45767901
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  45767861 tcggcagttaactaccgaggttttcctcggcagttaactgc 45767901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 8e-40; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 13896833 - 13897004
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaattt 100  Q
    ||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||| |||||| ||  |||||||||||| ||  ||||||| ||    
T  13896833 taatggatgagagagcttctgccagatttgtagtagaaaatcttcggcagttaactaccgaggttttcctcgacagttaactgcagccagttattaaatt 13896932  T
Q  101 cttctgcagttaactgccgaggag-caaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaa 171  Q
    |||| ||| ||||||||||||||| ||||||||||||||| | ||||| |  || |||||||||||| ||||    
T  13896933 cttcagcaattaactgccgaggagtcaaaaacatattttactcgtgtgtcttagccttatgcaatgtatcaa 13897004  T

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Target: chr3; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 52570523 - 52570693
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaattt 100  Q
    ||||| ||||||||| ||||||||||||||| |||||| ||  |||||||||||||||||| |||||  || | |||||||||||  || || || | ||    
T  52570523 taatgaatgagagagtttctgccagatttgtagtagaagatcctcggcagttaactaccgaggtttttctcggtagttaactgcagtcggtttttgaatt 52570622  T
Q  101 cttctgcagttaactgccgaggagcaaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaa 171  Q
    |||| ||||||||||||||||| | |||||| ||||||| | ||||||| ||| |||||||||||||||||    
T  52570623 cttcggcagttaactgccgaggggaaaaaacgtattttaatcgtgtgcctcagccttatgcaatgtgtcaa 52570693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 41803114 - 41802975
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaattt 100  Q
    ||||||||||||||||||||||||||||||| | | || ||  |||||||||||||||||| |||||| || ||||||||||||| ||| || |||| ||    
T  41803114 taatggatgagagagcttctgccagatttgtagcaaaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggtttttaaatt 41803015  T
Q  101 cttctgcagttaactgccgag-gagcaaaaacatatttta 139  Q
    |||| |||||||||||||||| | |||||||| |||||||    
T  41803014 cttcggcagttaactgccgagtgggcaaaaacgtatttta 41802975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 41577191 - 41577008
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaattt 100  Q
    |||||||||||||||||||||| |||||||| | |||| ||  ||||||||| ||||||||||||||  ||  |||||||||||| |||||| || | ||    
T  41577191 taatggatgagagagcttctgcaagatttgtagcagaagatcctcggcagtttactaccgaagtttttgtcgacagttaactgcaaccgattttttaatt 41577092  T
Q  101 cttctgcagttaactgccgagga-gcaaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctct 183  Q
    | ||  |||||||||| |||  | |||||||| |||||||||||| |  | ||| |||||| |||||||||| |||||||||||    
T  41577091 catcgacagttaactgtcgaaaaggcaaaaacgtattttatttgtatttctcagccttatgaaatgtgtcaacaacaattctct 41577008  T

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Target: chr3; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 182
Target Start/End: Original strand, 7247855 - 7247999
Alignment:
Q  39 aattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatattt 137  Q
    |||| ||| |||||||||||||| |||||| ||  |||||||||||| ||| ||||| | ||| || ||||||||||||||| || |||||| | |||||    
T  7247855 aattttcgacagttaactaccgaggttttcctcgtcagttaactgcagccggttattgaattcctcggcagttaactgccgagggggcaaaagcgtattt 7247954  T
Q  138 tatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
    |||| ||||||| ||| ||||| ||||||||||| ||||||||||    
T  7247955 tattcgtgtgcctcagccttatccaatgtgtcaacaacaattctc 7247999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 182
Target Start/End: Original strand, 41579719 - 41579863
Alignment:
Q  39 aattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgaggagcaaaaa-catattt 137  Q
    |||| |||||||||||||||||| |||||| || ||||||||||||| ||| ||||| | ||| || ||| ||||||||||||| | ||||| | |||||    
T  41579719 aattttcggcagttaactaccgaggttttcctcggcagttaactgcagccggttattgaattcctcagcaattaactgccgagggggaaaaatcgtattt 41579818  T
Q  138 tatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
    || || |||||| ||| ||||||||| ||||||| ||||||||||    
T  41579819 tacttatgtgcctcagccttatgcaacgtgtcaacaacaattctc 41579863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 51402355 - 51402537
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaattt 100  Q
    ||||||||||||||||||||| ||||||||| | |||| ||  |||||||||||||||||| |||||| ||  ||||||||| ||  ||||| || | ||    
T  51402355 taatggatgagagagcttctgacagatttgtagcagaagatcctcggcagttaactaccgaggttttcctcgacagttaactacaatcgatttttgaatt 51402454  T
Q  101 cttctgcagttaactgccgagg-agcaaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
     ||||||| |||||||| |||| ||||||||| ||||||| | ||||  | ||| | |||| |||||||||| | ||||||||    
T  51402455 attctgcaattaactgctgaggaagcaaaaacgtattttactcgtgtttctcagccatatgaaatgtgtcaacatcaattctc 51402537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 55207620 - 55207739
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaattt 100  Q
    ||||||||||||||||||||||||||||||| | |||| ||  |||||||||||||||| | ||| || |  ||||||||||||| ||| || || | ||    
T  55207620 taatggatgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccaaggttgtcctaggcagttaactgcaaccggtttttgaatt 55207719  T
Q  101 cttctgcagttaactgccga 120  Q
    |||| |||||||||||||||    
T  55207720 cttcggcagttaactgccga 55207739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 55385253 - 55385169
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||||||||||||||||||||| | |||| ||  ||| |||||||||||||| |||||| || |||||||||||||    
T  55385253 taatggatgagagagcttctgccagatttgtagcagaagatcctcgacagttaactaccgaggttttcctcggcagttaactgca 55385169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 182
Target Start/End: Complemental strand, 52567836 - 52567697
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgagga-gcaaaaacatattttattt 142  Q
    |||||||||||||||| |||||||  || |||||||| |||| |||||| || | || ||| |||||||||||||||| | |||||| | ||||||| |     
T  52567836 tcggcagttaactacctaagtttttctcggcagttaagtgcagccgatttttgaattattcggcagttaactgccgagaaggcaaaatcgtattttactc 52567737  T
Q  143 gtgtgccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
    ||||||| ||| ||||||||| || |||| ||||||||||    
T  52567736 gtgtgcctcagccttatgcaacgtatcaacaacaattctc 52567697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 51 - 184
Target Start/End: Original strand, 41805682 - 41805816
Alignment:
Q  51 ttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgagga-gcaaaaacatattttatttgtgtgcc 149  Q
    |||||| |||| |||||| || |||||||| |||| ||| |  |||| ||||||  ||||||||||||||||| |||||||| ||  ||| |||||||||    
T  41805682 ttaactcccgaggttttcctcggcagttaattgcagccggtctttaaattcttcgacagttaactgccgaggaagcaaaaacgtaaattacttgtgtgcc 41805781  T
Q  150 gcagtcttatgcaatgtgtcaaaaacaattctctt 184  Q
     ||| ||||||||||||||||  ||||||||||||    
T  41805782 tcagccttatgcaatgtgtcatcaacaattctctt 41805816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 182
Target Start/End: Original strand, 2432938 - 2433082
Alignment:
Q  39 aattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgaggagcaaaaa-catattt 137  Q
    |||| |||||||||||||||| | |||||| ||  |||||||||| | ||| ||||| | ||| ||  |||||||||||||||| |  |||| | |||||    
T  2432938 aattttcggcagttaactaccaaggttttcctcgacagttaactgtatccggttattgaattcctcgacagttaactgccgaggggataaaagcgtattt 2433037  T
Q  138 tatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
    || | ||||||| ||| ||||||||||||||||| ||||||||||    
T  2433038 tactcgtgtgcctcagccttatgcaatgtgtcaacaacaattctc 2433082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 171
Target Start/End: Complemental strand, 19440329 - 19440201
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgagga-gcaaaaacatattttattt 142  Q
    |||||||||||||||||| |||||| || ||||||||||||| ||| ||  | | |||||| |||||||||||||||||| ||||||   ||||||| |     
T  19440329 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggtttatgaattcttcggcagttaactgccgaggaggcaaaagtttattttactc 19440230  T
Q  143 gtgtgccgcagtcttatgcaatgtgtcaa 171  Q
    ||||||| |||  ||||||||||| ||||    
T  19440229 gtgtgcctcagctttatgcaatgtatcaa 19440201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 179
Target Start/End: Complemental strand, 29929499 - 29929363
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatattttattt 142  Q
    |||||||||||||| ||| |||||| || |||||||| |||| ||| || || | ||| ||  |||||||||| ||| ||||||||| ||||||||| ||    
T  29929499 tcggcagttaactatcgaggttttcctcggcagttaattgcagccggtttttgaattcctcaacagttaactgtcgagggagcaaaatcatattttactt 29929400  T
Q  143 gtgtgccgcagtcttatgcaatgtgtcaaaaacaatt 179  Q
    ||||||| ||| |||||  |||||||||| |||||||    
T  29929399 gtgtgcctcagccttataaaatgtgtcaacaacaatt 29929363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 179
Target Start/End: Complemental strand, 29978653 - 29978517
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatattttattt 142  Q
    |||||||||||||| ||| |||||| || |||||||| |||| ||| || || | ||| ||  |||||||||| ||| ||||||||| ||||||||| ||    
T  29978653 tcggcagttaactatcgaggttttcctcggcagttaattgcagccggtttttgaattcctcaacagttaactgtcgagggagcaaaatcatattttactt 29978554  T
Q  143 gtgtgccgcagtcttatgcaatgtgtcaaaaacaatt 179  Q
    ||||||| ||| |||||  |||||||||| |||||||    
T  29978553 gtgtgcctcagccttataaaatgtgtcaacaacaatt 29978517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 43476308 - 43476224
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||||||||||| ||||||||| | | || ||  |||||||||||||||||| |||||| || |||||||||||||    
T  43476308 taatggatgagagagcttctgtcagatttgtagcaaaagatcctcggcagttaactaccgaggttttcctcggcagttaactgca 43476224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 182
Target Start/End: Complemental strand, 46345003 - 46344871
Alignment:
Q  51 ttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatattttatttgtgtgcc 149  Q
    ||||||||||| |||||| || ||||||||||||| |||||| || | ||| ||  |||||||||||||| || ||||||| |||||||| |||||||||    
T  46345003 ttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcctcgacagttaactgccgagggggcaaaaaaatattttacttgtgtgcc 46344904  T
Q  150 gcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
     ||  ||||| |||| |||||| | ||||||||    
T  46344903 tcaaccttatccaatttgtcaacatcaattctc 46344871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 24703374 - 24703461
Alignment:
Q  3 atggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccga 90  Q
    ||||||||||||||||||||||||||||| | |||| || |||||||||||||| | || | |||| || ||||||||||||| ||||    
T  24703374 atggatgagagagcttctgccagatttgtagcagaagatcatcggcagttaactcctgaggatttcctcggcagttaactgcatccga 24703461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 179
Target Start/End: Original strand, 28611095 - 28611236
Alignment:
Q  39 aattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattatt-aatttcttctgcagttaactgccga-ggagcaaaaacatatt 136  Q
    |||| |||||||||||||||||  |||||| || ||||||||||||| ||| || || |||||| || ||||||||||||||| || ||||||  |||||    
T  28611095 aattctcggcagttaactaccgttgttttcctcggcagttaactgcagccggtttttgaatttc-tcggcagttaactgccgagggggcaaaattatatt 28611193  T
Q  137 ttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaatt 179  Q
    ||| ||||||| | ||| |||||| ||||||| || |||||||    
T  28611194 ttacttgtgtgtctcagccttatgaaatgtgtaaagaacaatt 28611236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 34694391 - 34694475
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||||||||||||||||||||| | |||| ||  ||||||||||||| |||| |||||  || |||||| ||||||    
T  34694391 taatggatgagagagcttctgccagatttgtagcagaagatcctcggcagttaactcccgaggtttttctcggcagtttactgca 34694475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 19454308 - 19454363
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaact 56  Q
    ||||||||||||||||||||||||||||||| |||||| ||  |||||||||||||    
T  19454308 taatggatgagagagcttctgccagatttgtagtagaagatcctcggcagttaact 19454363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 38 - 179
Target Start/End: Original strand, 43571679 - 43571821
Alignment:
Q  38 aaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatatt 136  Q
    ||||| ||||||||| |||| | |  |||||||  ||||||||||||| |||| | || | ||| || ||||||||||||||| || |||||||||||||    
T  43571679 aaattttcggcagtttactatcaagattttcattggcagttaactgcagccgacttttgaattcctcagcagttaactgccgagggggcaaaaacatatt 43571778  T
Q  137 ttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaatt 179  Q
    ||| |||||| ||  |  |||||| |||||||||| |||||||    
T  43571779 ttacttgtgtacctgaaccttatgtaatgtgtcaacaacaatt 43571821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 179
Target Start/End: Original strand, 45101811 - 45101984
Alignment:
Q  7 atgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctg 106  Q
    ||||||||||||||||||||||||| | |||| ||  |||||||||||||||| |||    | || ||||||||||||| ||| || || | ||| ||      
T  45101811 atgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccaaagaaaacctcggcagttaactgcagccggtttttgaattcctcaa 45101910  T
Q  107 cagttaactgccgaggag-caaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaatt 179  Q
    || ||||||||||||| |  |||||| ||||||| || |||||| ||  |||||| |||||||| | |||||||    
T  45101911 caattaactgccgaggggataaaaacgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaatt 45101984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 179
Target Start/End: Original strand, 29918341 - 29918477
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgaggag-caaaaacatattttattt 142  Q
    |||||||||||||| ||| |||||| || ||||||||||||| ||| || |  | || ||| |||||||| |||||||| | ||||| | ||||||| ||    
T  29918341 tcggcagttaactaacgaggttttcctcggcagttaactgcagccggttttcgaattattcggcagttaattgccgaggggccaaaatcgtattttactt 29918440  T
Q  143 gtgtgccgcagtcttatgcaatgtgtcaaaaacaatt 179  Q
     |||||| ||| |||||| ||| |||||| |||||||    
T  29918441 atgtgcctcagccttatgaaatatgtcaacaacaatt 29918477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 179
Target Start/End: Original strand, 29967494 - 29967630
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgaggag-caaaaacatattttattt 142  Q
    |||||||||||||| ||| |||||| || ||||||||||||| ||| || |  | || ||| |||||||| |||||||| | ||||| | ||||||| ||    
T  29967494 tcggcagttaactaacgaggttttcctcggcagttaactgcagccggttttcgaattattcggcagttaattgccgaggggccaaaatcgtattttactt 29967593  T
Q  143 gtgtgccgcagtcttatgcaatgtgtcaaaaacaatt 179  Q
     |||||| ||| |||||| ||| |||||| |||||||    
T  29967594 atgtgcctcagccttatgaaatatgtcaacaacaatt 29967630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 34691698 - 34691618
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgaggag 124  Q
    |||||||||||||||||| |||||| ||  |||||||||||| |||  | || ||||| || |||||||||||||||||||    
T  34691698 tcggcagttaactaccgaggttttcctcgacagttaactgcagccggatttttatttcctcggcagttaactgccgaggag 34691618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 51696531 - 51696591
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccga 61  Q
    ||||||||||||||||||||||||||||||  | |||| ||  ||||||||||||||||||    
T  51696531 taatggatgagagagcttctgccagatttgcagcagaagatcctcggcagttaactaccga 51696591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 182
Target Start/End: Original strand, 19454354 - 19454464
Alignment:
Q  73 gcagttaactgcacccgattattaatttcttctgcagttaactgccgag-gagcaaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaa 171  Q
    ||||||||||||| |||||| || | ||| || |||||||||||||||| | |||||| | ||||||| | ||||| | ||  |||||||||||| ||||    
T  19454354 gcagttaactgcaaccgatttttgaattcctcagcagttaactgccgagagggcaaaagcgtattttactcgtgtgtctcaaccttatgcaatgtatcaa 19454453  T
Q  172 aaacaattctc 182  Q
     ||||||||||    
T  19454454 caacaattctc 19454464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 184
Target Start/End: Original strand, 43478830 - 43478971
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca-cccgattattaatttcttctgcagttaactgccgaggag-caaaaacatattttatt 141  Q
    ||||||||||||||||||||||||| || ||||||||||||| || ||||  |||   |||| ||||||||||||||||| | |||||||||  |||| |    
T  43478830 tcggcagttaactaccgaagttttcctcggcagttaactgcagccggatttctaa-aacttcagcagttaactgccgaggggacaaaaacatcatttact 43478928  T
Q  142 tgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctctt 184  Q
     ||||| | ||  |||||| ||||||  || ||||||||||||    
T  43478929 cgtgtggcacaaccttatgtaatgtgggaacaacaattctctt 43478971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 4004759 - 4004844
Alignment:
Q  1 taatggatgagag-agcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||| || ||||||||| ||||| | |||| ||  ||||||||||| |||||| |||||| || |||||||||||||    
T  4004759 taatggatgagaggagattctgccaggtttgtagcagaagatcctcggcagttaagtaccgaggttttcctcggcagttaactgca 4004844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 7941183 - 7941142
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||| ||||||||||| ||||||||||||||||    
T  7941183 tcggcagttaactgccgaagttttcctcagcagttaactgca 7941142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 36134440 - 36134355
Alignment:
Q  1 taatggatgagag-agcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||| |||| || ||||||||||||||| | |||| ||  ||||||||||||| |||| |||||| || |||||||||||||    
T  36134440 taatggataagaggagattctgccagatttgtagcagaagatcctcggcagttaactcccgaggttttcctcggcagttaactgca 36134355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 179
Target Start/End: Original strand, 42807663 - 42807736
Alignment:
Q  107 cagttaactgccgaggag-caaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaatt 179  Q
    |||||||||||||||||| ||||||  ||||||||||||||||  ||| |||||| ||||||| || |||||||    
T  42807663 cagttaactgccgaggaggcaaaaatgtattttatttgtgtgcatcagccttatgaaatgtgttaacaacaatt 42807736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 46347679 - 46347772
Alignment:
Q  2 aatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattatt 95  Q
    |||||||||||||| |||| || ||||||| | |||| ||  ||| ||||||| || ||| |||||| || ||||||||||||| |||||||||    
T  46347679 aatggatgagagagtttctccctgatttgtagcagaagatcttcgacagttaattatcgaggttttcctcggcagttaactgcagccgattatt 46347772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 13747719 - 13747798
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgaggag 124  Q
    ||||||||||||||| || |||||| |||||||||||||||| |||  | | || ||| || |||||||||||||||||||    
T  13747719 tcggcagttaactac-gaggttttcctcagcagttaactgcagccggatttcaaattcatcggcagttaactgccgaggag 13747798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 14043898 - 14043946
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgatt 92  Q
    ||||||||||||| ||||||||||| || ||||||||||||| ||||||    
T  14043898 tcggcagttaactgccgaagttttcctcggcagttaactgcagccgatt 14043946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 19842576 - 19842529
Alignment:
Q  45 cggcagttaactaccgaagttttcatcagcagttaactgcacccgatt 92  Q
    ||||||||||||  |||||||||| |||||||||||||||| ||||||    
T  19842576 cggcagttaactgtcgaagttttcctcagcagttaactgcagccgatt 19842529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 2743471 - 2743393
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgagg 122  Q
    ||||||||||||| |||| |||||| || ||||||||||||| |||  | | || ||| || |||||||||||||||||    
T  2743471 tcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagg 2743393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 41137824 - 41137794
Alignment:
Q  1 taatggatgagagagcttctgccagatttgt 31  Q
    |||||||||||||||||||||||||||||||    
T  41137824 taatggatgagagagcttctgccagatttgt 41137794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 50122453 - 50122395
Alignment:
Q  43 atcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttc 101  Q
    |||||||||||||| ||||||||| | || ||||||||||||| ||| || ||||||||    
T  50122453 atcggcagttaactcccgaagtttccttcggcagttaactgcagccggttcttaatttc 50122395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 52387871 - 52387833
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaact 82  Q
    ||||||||||||||||||||||||| || ||||||||||    
T  52387871 tcggcagttaactaccgaagttttcgtcggcagttaact 52387833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 182
Target Start/End: Complemental strand, 55267481 - 55267375
Alignment:
Q  77 ttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaaaaac 175  Q
    ||||||||| |||||| || | |||||| ||||||||||| ||| || |||||||| ||  ||| | ||||| | ||| ||||||||| ||||||| |||    
T  55267481 ttaactgcagccgatttttgaattcttcggcagttaactgtcgagggggcaaaaacgtaaattactcgtgtgtctcagccttatgcaacgtgtcaacaac 55267382  T
Q  176 aattctc 182  Q
    |||||||    
T  55267381 aattctc 55267375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 2647699 - 2647740
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||| |||||| || |||||||||||||    
T  2647699 tcggcagttaactaccgaggttttcctcggcagttaactgca 2647740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 129
Target Start/End: Original strand, 4002505 - 4002590
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgaggagcaaaa 129  Q
    ||||||||||||| |||| |||||| || ||||||||||||| |||  | | || ||| || | ||||||||||||||| ||||||    
T  4002505 tcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcagtagttaactgccgaggggcaaaa 4002590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 6143744 - 6143703
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||| ||||||||||| || |||||||||||||    
T  6143744 tcggcagttaactgccgaagttttcctcggcagttaactgca 6143703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7245208 - 7245155
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaa 54  Q
    ||||||||||||||||||||| ||||||||| | |||| ||  |||||||||||    
T  7245208 taatggatgagagagcttctgtcagatttgtagcagaagatactcggcagttaa 7245155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 16484456 - 16484497
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||| ||||||||||| || |||||||||||||    
T  16484456 tcggcagttaactcccgaagttttcctcggcagttaactgca 16484497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 18436795 - 18436766
Alignment:
Q  1 taatggatgagagagcttctgccagatttg 30  Q
    ||||||||||||||||||||||||||||||    
T  18436795 taatggatgagagagcttctgccagatttg 18436766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 20366308 - 20366191
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaattt 100  Q
    ||||| |||||| ||||||||  |||||||| |||||| ||  ||| || ||||||||||| |||||  | |||||||||||||| | | || || | ||    
T  20366308 taatgaatgagaaagcttctggtagatttgtagtagaagatcctcgacaattaactaccgaggttttttttagcagttaactgcagctggtttttgaatt 20366209  T
Q  101 cttctgcagttaactgcc 118  Q
    | || |||||||||||||    
T  20366208 cctcggcagttaactgcc 20366191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 34049153 - 34049112
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||| |||||| || |||||||||||||    
T  34049153 tcggcagttaactaccgaggttttcctcggcagttaactgca 34049112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 49268845 - 49268886
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||| |||||| || |||||||||||||    
T  49268845 tcggcagttaactaccgatgttttcctcggcagttaactgca 49268886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 54389868 - 54389827
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||| |||||| || |||||||||||||    
T  54389868 tcggcagttaactaccgaggttttcctcggcagttaactgca 54389827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 30943262 - 30943222
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  30943262 tcggcagttaactaccgaggttttcctcggcagttaactgc 30943222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 35743582 - 35743622
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  35743582 tcggcagttaactaccgaggttttcctcggcagttaactgc 35743622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 41844222 - 41844182
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||| ||||||||||||| |||||| |||||||||||||||    
T  41844222 tcggtagttaactaccgaggttttcctcagcagttaactgc 41844182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 41844364 - 41844404
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  41844364 tcggcagttaactaccgaggttttcctcggcagttaactgc 41844404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 42166410 - 42166450
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    ||||||||||||||||||||||||| || |||||| |||||    
T  42166410 tcggcagttaactaccgaagttttcctcggcagtttactgc 42166450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 46697784 - 46697744
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  46697784 tcggcagttaactaccgaggttttcctcggcagttaactgc 46697744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 49144456 - 49144496
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  49144456 tcggcagttaactaccgaggttttcttcggcagttaactgc 49144496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 49219748 - 49219832
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||| ||||||||||| || |||||| | |||| ||  |||  ||||||||||| | |||||| || |||||||||||||    
T  49219748 taatggatgggagagcttctgtcaaatttgtagcagaagatcctcgatagttaactaccaaggttttcctcggcagttaactgca 49219832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 50477253 - 50477213
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  50477253 tcggcagttaactaccgaggttttcctcggcagttaactgc 50477213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 1e-38; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 6 - 182
Target Start/End: Complemental strand, 20192464 - 20192287
Alignment:
Q  6 gatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttct 105  Q
    |||||||||||||||||||||||||| | |||| ||  |||||| ||||||| |||||||||| || ||||||||||||| ||||||||| | ||||||     
T  20192464 gatgagagagcttctgccagatttgtagcagaagatcctcggcatttaactatcgaagttttcctcggcagttaactgcagccgattattgaattcttca 20192365  T
Q  106 gcagttaactgccg-aggagcaaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
    ||||||||||| || ||| |||||| | ||||||| ||||||||| ||| |||||| |||||||||| ||||||||||    
T  20192364 gcagttaactgacgaaggggcaaaatcgtattttacttgtgtgcctcagccttatgaaatgtgtcaacaacaattctc 20192287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 182
Target Start/End: Original strand, 3603143 - 3603287
Alignment:
Q  39 aattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgagg-agcaaaaacatattt 137  Q
    |||| |||||||||||||||||| |||||| || | ||||||||||| ||  ||||| | |||||| ||||||||||| ||||| ||||||||| |||||    
T  3603143 aattttcggcagttaactaccgaggttttcctcggaagttaactgcagccagttattgaattcttcggcagttaactgtcgagggagcaaaaacgtattt 3603242  T
Q  138 tatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
    || || |||||| ||| ||||||||||||||||| ||||||||||    
T  3603243 tacttatgtgcctcagccttatgcaatgtgtcaacaacaattctc 3603287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 18307370 - 18307231
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaattt 100  Q
    ||||||||||||| ||||||||||||||||| | |||| ||  |||||||||||||||||| |||||| || |||||||||| || |||||| || | ||    
T  18307370 taatggatgagagggcttctgccagatttgtagcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactacagccgattttttaatt 18307271  T
Q  101 cttctgcagttaactgccg-aggagcaaaaacatatttta 139  Q
    | ||  ||||||||||||| |||||||||||| |||||||    
T  18307270 cctcgacagttaactgccgaaggagcaaaaacgtatttta 18307231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 44 - 183
Target Start/End: Original strand, 20200148 - 20200288
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattatt-aatttcttctgcagttaactgccga-ggagcaaaaacatattttatt 141  Q
    ||||||||||||||| || |||||| || |||||||||||||   | ||||| ||||||||   |||||||||||||| || |||||||| |||||||||    
T  20200148 tcggcagttaactacagatgttttcctcggcagttaactgcagttggttattgaatttcttga-cagttaactgccgatggggcaaaaacgtattttatt 20200246  T
Q  142 tgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctct 183  Q
    |||||||| ||| ||||||||||||||||| |||||||||||    
T  20200247 tgtgtgcctcagccttatgcaatgtgtcaacaacaattctct 20200288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 179
Target Start/End: Original strand, 18538330 - 18538471
Alignment:
Q  39 aattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatattt 137  Q
    |||| ||||||||||||||||||||||||| || ||||||||||||| ||| || || | ||| ||  || ||||||||||| || |||||| | |||||    
T  18538330 aattctcggcagttaactaccgaagttttcctcggcagttaactgcagccggtttttgaattcctcgacaattaactgccgagggggcaaaatcgtattt 18538429  T
Q  138 tatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaatt 179  Q
    || ||||||||| ||| || ||| |||||||||| |||||||    
T  18538430 tacttgtgtgcctcagcctaatgaaatgtgtcaacaacaatt 18538471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 3600453 - 3600269
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattatta-att 99  Q
    ||||| |||| ||| |||||| ||||||||| | |||| ||  ||||| |||||||| ||| |||||| |  ||||||||||||| | | |||||| | |    
T  3600453 taatgcatgaaagaacttctgtcagatttgtagcagaagatcctcggctgttaactatcgaggttttccttggcagttaactgcagctggttattataat 3600354  T
Q  100 tcttctgcagttaactgccga-ggagcaaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctct 183  Q
    | ||| ||||||||||||||| || |||||||||||||||| ||||||| | ||   ||||| |||||||||| |||||||||||    
T  3600353 tattcggcagttaactgccgagggggcaaaaacatattttacttgtgtggctcaactttatgaaatgtgtcaacaacaattctct 3600269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 73 - 184
Target Start/End: Original strand, 18310050 - 18310162
Alignment:
Q  73 gcagttaactgcacccgattattaatttcttctgcagttaactgccgaggag-caaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaa 171  Q
    |||||||||||||  || ||||| | ||| ||  ||||||||||| |||||| ||||||| ||||||| ||||||||| ||| |||||||||||||||||    
T  18310050 gcagttaactgcagtcggttattgaattcctcgacagttaactgctgaggaggcaaaaacgtattttacttgtgtgcctcagccttatgcaatgtgtcaa 18310149  T
Q  172 aaacaattctctt 184  Q
     ||||||||||||    
T  18310150 caacaattctctt 18310162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 25497627 - 25497543
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||||||||||||| ||||||| | |||| ||| ||||||||||||||||||  ||||| || |||||||||||||    
T  25497627 taatggatgagagagcttctgcctgatttgtagcagaagattctcggcagttaactaccgagattttcctcggcagttaactgca 25497543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 11346124 - 11346039
Alignment:
Q  1 taatggatgagag-agcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||| || ||||||||||||||| | |||| ||  ||| |||||||||||||| |||||| || |||||||||||||    
T  11346124 taatggatgagaggagattctgccagatttgtagcagaagatcctcgacagttaactaccgaggttttcctcggcagttaactgca 11346039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 171
Target Start/End: Original strand, 35567090 - 35567155
Alignment:
Q  107 cagttaactgccgag-gagcaaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaa 171  Q
    ||||||||||||||| |||||||||||||||||| ||||||||| ||| || ||| ||||||||||    
T  35567090 cagttaactgccgagagagcaaaaacatattttacttgtgtgcctcagcctgatgaaatgtgtcaa 35567155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 542747 - 542807
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccga 61  Q
    |||||||||||||| |||||||||||||||| | |||| ||  ||||||||||||||||||    
T  542747 taatggatgagagaacttctgccagatttgtagcagaagatcctcggcagttaactaccga 542807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 139
Target Start/End: Complemental strand, 41798891 - 41798795
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatatttta 139  Q
    ||||||| |||||||||| |||||| || ||||||||||||| |||  | | || |||||| ||||||||||||||| || |||||| |||||||||    
T  41798891 tcggcagataactaccgaggttttcttcggcagttaactgcagccggatttcaaattcttcagcagttaactgccgagggggcaaaatcatatttta 41798795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 179
Target Start/End: Complemental strand, 1398673 - 1398541
Alignment:
Q  48 cagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccg-aggagcaaaaacatattttatttgtgt 146  Q
    |||||||||||||| |||||| |  || |||||||||| ||| ||||| | ||| || ||||||||||| || ||||||||||   ||||||| || |||    
T  1398673 cagttaactaccgaggttttccttggctgttaactgcaaccggttattgaattcctcggcagttaactgtcgaaggagcaaaagtgtattttacttctgt 1398574  T
Q  147 gccgcagtcttatgcaatgtgtcaaaaacaatt 179  Q
    | | ||  |||||| |||||||||| |||||||    
T  1398573 gtctcaaccttatgtaatgtgtcaacaacaatt 1398541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 146
Target Start/End: Original strand, 8702202 - 8702301
Alignment:
Q  48 cagttaactaccgaagttttcatcagcagttaactgca-cccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatattttatttgtg 145  Q
    |||||||||||||| |||||| ||||||||||||||||  | |||| |||| ||| || ||||||||||| ||| ||||||||| | ||||||| |||||    
T  8702202 cagttaactaccgaggttttcctcagcagttaactgcagtcagatttttaa-ttcctcggcagttaactgtcgagggagcaaaatcgtattttacttgtg 8702300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 179
Target Start/End: Complemental strand, 34682330 - 34682194
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatattttattt 142  Q
    |||| |||||||| |||| |||||| || ||||||||||||| ||| || || | ||| ||  |||||||||| | | ||||||||| | ||||||| ||    
T  34682330 tcggtagttaactcccgaggttttcctcggcagttaactgcagccggtttttgaattcctcgacagttaactgtcaagggagcaaaagcgtattttactt 34682231  T
Q  143 gtgtgccgcagtcttatgcaatgtgtcaaaaacaatt 179  Q
    |||  || ||| |||||| |||||||||| |||||||    
T  34682230 gtgaacctcagccttatgaaatgtgtcaacaacaatt 34682194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 35564377 - 35564317
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccga 61  Q
    |||||||||||||||||| |||||||||||| | |||| ||  || |||||||||||||||    
T  35564377 taatggatgagagagcttatgccagatttgtagcagaagatcctcagcagttaactaccga 35564317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 182
Target Start/End: Complemental strand, 25877694 - 25877556
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccg-aggagcaaaaacatattttattt 142  Q
    ||||||||||||||||||||||||| || |||||||| |||| ||| || |  | ||| || ||| |||| ||||| ||  | |||||| ||||||| |     
T  25877694 tcggcagttaactaccgaagttttcctcggcagttaattgcagccggtt-tcgaattcctcggcatttaattgccgaagtggtaaaaacgtattttactc 25877596  T
Q  143 gtgtgccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
    ||||| | ||  ||||||||||||||||| ||||||||||    
T  25877595 gtgtgacacaaccttatgcaatgtgtcaacaacaattctc 25877556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42865761 - 42865816
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaact 56  Q
    ||||||||||||||||||||||||||||||| | |||| ||  |||||| ||||||    
T  42865761 taatggatgagagagcttctgccagatttgtagcagaagatcctcggcaattaact 42865816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 85
Target Start/End: Original strand, 41799770 - 41799808
Alignment:
Q  47 gcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  41799770 gcagttaacttccgaagttttcatcggcagttaactgca 41799808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 19037470 - 19037511
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||| |||||| || |||||||||||||    
T  19037470 tcggcagttaactaccgaggttttcctcggcagttaactgca 19037511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 21058537 - 21058496
Alignment:
Q  43 atcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    ||||| ||||||||||||||||||||||  ||||||||||||    
T  21058537 atcggtagttaactaccgaagttttcattggcagttaactgc 21058496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 28388519 - 28388560
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||| |||||| || |||||||||||||    
T  28388519 tcggcagttaactaccgaggttttcctcggcagttaactgca 28388560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 41201807 - 41201750
Alignment:
Q  38 aaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattatt 95  Q
    ||||| ||| |||||||||||||| |||||| || ||||||||||||| ||| |||||    
T  41201807 aaattttcgacagttaactaccgaggttttcctcggcagttaactgcagccggttatt 41201750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 42539375 - 42539432
Alignment:
Q  46 ggcagttaactaccgaagttttcatcagcagttaactgcacccg-attattaatttct 102  Q
    |||||||||||||| |||||||| || ||||||||||||| ||| ||| |||||||||    
T  42539375 ggcagttaactaccaaagttttcctcggcagttaactgcagccgaatttttaatttct 42539432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 8577047 - 8577007
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  8577047 tcggcagttaactaccgaggttttcttcggcagttaactgc 8577007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 13837797 - 13837757
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  13837797 tcggcagttaactaccgaggttttcctcggcagttaactgc 13837757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 28238212 - 28238172
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  28238212 tcggcagttaactaccgaggttttcctcggcagttaactgc 28238172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 34122597 - 34122521
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga 120  Q
    ||||||||||||||||||  ||||| || ||||||||||||| |||  | | || ||| || |||||||||||||||    
T  34122597 tcggcagttaactaccgagcttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 34122521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 35281879 - 35281839
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||| |||| ||||||||||||||| |||||||||||||||    
T  35281879 tcggtagtttactaccgaagttttcctcagcagttaactgc 35281839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 10 - 179
Target Start/End: Original strand, 29700268 - 29700438
Alignment:
Q  10 agagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcag 109  Q
    |||||||||||||||||||||| | |||| || ||||||| ||||||||||| |||||| || ||||||||||||| ||| ||||| | ||| || ||||    
T  29700268 agagagcttctgccagatttgtagcagaagatcatcggcaattaactaccgaggttttcctcggcagttaactgcagccggttattgaattcctcagcag 29700367  T
Q  110 ttaactgccgaggag-caaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaatt 179  Q
    ||||||| ||||||| ||||| | ||||||| ||||||||| ||| |||||| |||||||||| |||||||    
T  29700368 ttaactgtcgaggagacaaaagcgtattttacttgtgtgcctcagccttatgaaatgtgtcaacaacaatt 29700438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 38 - 183
Target Start/End: Original strand, 49572894 - 49573040
Alignment:
Q  38 aaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatatt 136  Q
    ||||| ||| ||||| |||||||| |||||| || ||||||||||||| ||||||||| | ||| ||  |||||||||| ||| || |||||||| ||||    
T  49572894 aaattttcgacagtttactaccgaggttttcctcggcagttaactgcagccgattattgaattcctcgacagttaactgtcgatggggcaaaaacgtatt 49572993  T
Q  137 ttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctct 183  Q
    ||| ||||||||| ||| ||||||||||||||||| ||| |||||||    
T  49572994 ttacttgtgtgcctcagccttatgcaatgtgtcaacaacgattctct 49573040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 958551 - 958721
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaattt 100  Q
    ||||||||||||||||||||||| ||||||| | |||| ||  |||||||||||||||||| |||||| || ||||||||||||| ||| || || | ||    
T  958551 taatggatgagagagcttctgccggatttgtagcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcaaccggtttttgaatt 958650  T
Q  101 cttctgcagttaactgccgag-gagcaaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaa 171  Q
    | || ||||||||||| |||| |  ||||||| ||||||| || |||||| ||| |||||  ||||||||||    
T  958651 catc-gcagttaactgtcgagaggacaaaaacgtattttacttatgtgcctcagccttataaaatgtgtcaa 958721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 39 - 179
Target Start/End: Original strand, 37959715 - 37959856
Alignment:
Q  39 aattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatattt 137  Q
    |||| |||||||||||||||||| |||||| || ||||||||||||| | | ||||||| ||| ||  |||||||||||||| || | |||||| |||||    
T  37959715 aattttcggcagttaactaccgatgttttcctcggcagttaactgcagctggttattaaattcctcaacagttaactgccgagggggtaaaaacgtattt 37959814  T
Q  138 tatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaatt 179  Q
    || | ||||||| ||| |||||| |||||||||| |||||||    
T  37959815 tactcgtgtgcctcagccttatgtaatgtgtcaacaacaatt 37959856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 44561287 - 44561471
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaattt 100  Q
    ||||||||||||||||||||||||||||||| | |||  ||  ||||||||||||||||||  ||||| || | ||||||||||| ||| || || ||||    
T  44561287 taatggatgagagagcttctgccagatttgtagcagacgatcctcggcagttaactaccgagattttcctcggtagttaactgcagccggttttttattt 44561386  T
Q  101 cttctgcagttaactgccgag-gagcaaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctctt 184  Q
      || |||||||||  ||||| | |||||| | ||||||| | ||||  | ||| |||||| |||||||||| ||||||| ||||    
T  44561387 actcggcagttaacaaccgagagggcaaaatcgtattttactcgtgtttctcagccttatgaaatgtgtcaacaacaattttctt 44561471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 56138368 - 56138284
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||||||||||||||||||||| | |||| ||  ||||||||||||||| || |||||| || |||||||||||||    
T  56138368 taatggatgagagagcttctgccagatttgtagcagaagatcctcggcagttaactactgaggttttcctcggcagttaactgca 56138284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 38 - 171
Target Start/End: Complemental strand, 955871 - 955737
Alignment:
Q  38 aaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgagga-gcaaaaacatatt 136  Q
    ||||| |||||||||||||||||| |||||  || ||||||||||||| |||||| || | ||| || ||||||||||||| | || |||||||| ||||    
T  955871 aaattttcggcagttaactaccgaggtttttctcggcagttaactgcagccgatttttgaattcctcagcagttaactgccaaagaggcaaaaacgtatt 955772  T
Q  137 ttatttgtgtgccgcagtcttatgcaatgtgtcaa 171  Q
    ||| ||||||||| ||   ||||| ||||||||||    
T  955771 ttacttgtgtgcctcaactttatgaaatgtgtcaa 955737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 44 - 185
Target Start/End: Original strand, 44051092 - 44051234
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatattttattt 142  Q
    |||||||||||||||||| | |||| || | ||||||||||| ||| ||  | ||||| || ||||||||| ||||| || |||||||| ||  ||| |     
T  44051092 tcggcagttaactaccgaggatttcctcgggagttaactgcagccggtttcttatttcctcggcagttaaccgccgatggggcaaaaacgtaaattactg 44051191  T
Q  143 gtgtgccgcagtcttatgcaatgtgtcaaaaacaattctcttc 185  Q
    ||||||| ||| ||||||||||||||||| |||||||||||||    
T  44051192 gtgtgcctcagccttatgcaatgtgtcaacaacaattctcttc 44051234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 4786296 - 4786375
Alignment:
Q  6 gatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||||| |||||||||| | |||| || ||||||||||||| ||||| |||||| |||| |||||||||||    
T  4786296 gatgagagagcttctaccagatttgtagcagaagatcatcggcagttaacaaccgaggttttcctcagtagttaactgca 4786375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 48 - 182
Target Start/End: Complemental strand, 6280926 - 6280791
Alignment:
Q  48 cagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgag-gagcaaaaacatattttatttgtgt 146  Q
    |||||||||||||| |||||| |||| | ||||||||| ||| || |||| |||||   ||||||||||||||| | |||||||| ||  ||| | ||||    
T  6280926 cagttaactaccgatgttttcctcagtatttaactgcagccggtttttaaattctttgacagttaactgccgagagggcaaaaacgtaaattactcgtgt 6280827  T
Q  147 gccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
    ||| ||  ||||||||||||||||| ||||||||||    
T  6280826 gccccaaccttatgcaatgtgtcaacaacaattctc 6280791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 1042050 - 1041967
Alignment:
Q  2 aatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||| |||||||||||| |||||||||||| |||||| ||  ||||||||||||||||||  ||||  || |||||||||||||    
T  1042050 aatgaatgagagagcttatgccagatttgtagtagaagatcctcggcagttaactaccgagatttttctcggcagttaactgca 1041967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 182
Target Start/End: Original strand, 4979917 - 4980056
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatattttattt 142  Q
    ||||||||||||||||||   |||| |||||||||||||||| ||| || || |  || ||  |||||||||||||| |||| |||||| ||  ||| |     
T  4979917 tcggcagttaactaccgataatttcctcagcagttaactgcagccggtttttgaaatcgtcgacagttaactgccgagggaggaaaaacgtaaattactc 4980016  T
Q  143 gtgtgccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
    ||||||| ||  ||||||||||||||||| ||||||||||    
T  4980017 gtgtgcctcaaccttatgcaatgtgtcaacaacaattctc 4980056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 42885567 - 42885474
Alignment:
Q  1 taatggatgagagagcttctgccaga--tttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgatt 92  Q
    ||||||||||||||||||||||||||  ||||| | |||| || |||||||||||||| |||| |||||| |||| | |||||| || ||||||    
T  42885567 taatggatgagagagcttctgccagatttttgtagcagaagatcatcggcagttaactgccgaggttttcctcagtaattaactacagccgatt 42885474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 64 - 179
Target Start/End: Original strand, 21472504 - 21472620
Alignment:
Q  64 ttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgagg-agcaaaaacatattttatttgtgtgccgcagtcttatgca 162  Q
    ||||| || ||||||||||||| |||||| || | ||| || |||||||||||||||||  |||||||| ||||||| | ||||  | ||| |||||| |    
T  21472504 ttttcctcggcagttaactgcagccgatttttgaattcctcggcagttaactgccgaggcggcaaaaacgtattttactcgtgtttctcagccttatgaa 21472603  T
Q  163 atgtgtcaaaaacaatt 179  Q
    ||||||||| |||||||    
T  21472604 atgtgtcaacaacaatt 21472620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 56304966 - 56304911
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaact 56  Q
    ||||||||||||||||||||||||||||||| | |||||||  |||||| ||||||    
T  56304966 taatggatgagagagcttctgccagatttgtagcagaaaatcctcggcaattaact 56304911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 9890067 - 9889989
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgagg 122  Q
    |||||||||||||||||| |||||| || ||||||||||||| |||  | | || ||| || |||||||||||||||||    
T  9890067 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagg 9889989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 4783723 - 4783678
Alignment:
Q  40 attatcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||||||| ||||||||||| || |||||||||||||    
T  4783723 attatcggcagttaactgccgaagttttcctcggcagttaactgca 4783678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 20209327 - 20209368
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  20209327 tcggcagttaactaccgaagttttactcagcagttaactgca 20209368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 21015812 - 21015767
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccg 89  Q
    |||||||||||||||||| |||| | ||||||||||||||||||||    
T  21015812 tcggcagttaactaccgaggtttccctcagcagttaactgcacccg 21015767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 48256568 - 48256635
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca-cccgattattaatttcttctgcagtt 111  Q
    ||||||||||||||| ||||||||| || ||||||||||||| || |||| |||| |||||||||||||    
T  48256568 tcggcagttaactactgaagttttcctcggcagttaactgcagccggatttttaa-ttcttctgcagtt 48256635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 179
Target Start/End: Complemental strand, 51426616 - 51426474
Alignment:
Q  38 aaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccg--aggagcaaaaacatat 135  Q
    ||||| ||||||||||||||| || |||||  || ||| ||||||||| |||||| || | ||| ||  |||||||||| ||  |||| ||||||| |||    
T  51426616 aaattttcggcagttaactactgaggtttttctcggcaattaactgcagccgatttttgaattcctcgacagttaactgtcgaaagga-caaaaacgtat 51426518  T
Q  136 tttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaatt 179  Q
    |||| |||||||||  || |||||| || ||||||| |||||||    
T  51426517 tttacttgtgtgcctaagccttatgaaacgtgtcaacaacaatt 51426474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 4768689 - 4768610
Alignment:
Q  106 gcagttaactgccga-ggagcaaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctctt 184  Q
    ||||||||||||||| || ||||||  |||||||| ||||||||  ||| |||||| |||||||||| ||||||| ||||    
T  4768689 gcagttaactgccgagggggcaaaattatattttacttgtgtgcatcagccttatgaaatgtgtcaacaacaattttctt 4768610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34530752 - 34530807
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaact 56  Q
    |||||||||||||||||||||||| |||||| | |||| ||  |||||||||||||    
T  34530752 taatggatgagagagcttctgccaaatttgtagcagaagatcctcggcagttaact 34530807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 39588182 - 39588127
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaact 56  Q
    |||||||||||||||||||||||| |||||| | |||| ||  |||||||||||||    
T  39588182 taatggatgagagagcttctgccatatttgtagcagaagatcctcggcagttaact 39588127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 11494621 - 11494575
Alignment:
Q  39 aattatcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||| |||||||||||||||||| |||||| || |||||||||||||    
T  11494621 aattttcggcagttaactaccgaggttttcctcggcagttaactgca 11494575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 15995795 - 15995717
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgagg 122  Q
    |||||||||||||||||| |||||| || ||||||||||||| |||  | | || ||| || ||| |||||||||||||    
T  15995795 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcatttaactgccgagg 15995717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 19069260 - 19069182
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgagg 122  Q
    |||||||||||||||||| |||||| || ||||||||||||| |||  | | || ||| || ||| |||||||||||||    
T  19069260 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcatttaactgccgagg 19069182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 34151693 - 34151639
Alignment:
Q  38 aaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgatt 92  Q
    ||||| ||||||||| |||||||| |||||| || ||||||||||||| ||||||    
T  34151693 aaattttcggcagtttactaccgaggttttcctcggcagttaactgcagccgatt 34151639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 37015969 - 37015931
Alignment:
Q  46 ggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  37015969 ggcagttaactaccgaagttttcctcggcagttaactgc 37015931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 39590567 - 39590609
Alignment:
Q  43 atcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||||||||| |||||| || |||||||||||||    
T  39590567 atcggcagttaactaccgaggttttcctcggcagttaactgca 39590609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 85
Target Start/End: Original strand, 48807389 - 48807427
Alignment:
Q  47 gcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  48807389 gcagttaactgccgaagttttcctcagcagttaactgca 48807427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 6178110 - 6178151
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||| |||||| || |||||||||||||    
T  6178110 tcggcagttaactaccgaggttttcctcggcagttaactgca 6178151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 17342215 - 17342142
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgc 117  Q
    ||||||||||||||||||||||||  || | ||||||||||| ||||||  | | ||| || ||||||||||||    
T  17342215 tcggcagttaactaccgaagtttttctcggtagttaactgcagccgatttatgaattcctcggcagttaactgc 17342142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 21022888 - 21022929
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||| |||||| || |||||||||||||    
T  21022888 tcggcagttaactaccgaggttttcctcggcagttaactgca 21022929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 41023459 - 41023418
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||| | |||| ||||||||||||||||    
T  41023459 tcggcagttaactaccgaggatttcctcagcagttaactgca 41023418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 49094157 - 49094116
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||| |||||| || |||||||||||||    
T  49094157 tcggcagttaactaccgaggttttcctcggcagttaactgca 49094116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 21018107 - 21018067
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  21018107 tcggcagttaactaccgaggttttcttcggcagttaactgc 21018067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 30726741 - 30726781
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  30726741 tcggcagttaactaccgaggttttcctcggcagttaactgc 30726781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 31425318 - 31425358
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  31425318 tcggcagttaactaccgaggttttcctcggcagttaactgc 31425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 37563280 - 37563320
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  37563280 tcggcagttaactaccgaggttttcctcggcagttaactgc 37563320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 39773477 - 39773437
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  39773477 tcggcagttaactaccgaggttttcctcggcagttaactgc 39773437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 40354678 - 40354638
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  40354678 tcggcagttaactaccgaggttttcttcggcagttaactgc 40354638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 40358280 - 40358320
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  40358280 tcggcagttaactaccgaggttttcctcggcagttaactgc 40358320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 45971759 - 45971807
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgatt 92  Q
    ||||||||||||||||||||||||| ||   ||||||||||| ||||||    
T  45971759 tcggcagttaactaccgaagttttcttcgatagttaactgcagccgatt 45971807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 54634015 - 54634055
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  54634015 tcggcagttaactaccgaggttttcctcggcagttaactgc 54634055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 4e-29; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 18441398 - 18441582
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattatt-aatt 99  Q
    ||||||||||||||| ||||||||||||||| | |||| ||  ||||||||||||| |||| |||||  || |||||||||| ||  || ||||| ||||    
T  18441398 taatggatgagagagtttctgccagatttgtagcagaagatcctcggcagttaactgccgaggtttttctcggcagttaactacaatcggttattgaatt 18441497  T
Q  100 tcttctgcagttaactgccga-ggagcaaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctctt 184  Q
    || || ||||||||||||||| || |||||||| ||||||| ||||||| | ||| |||||| |||||||||| ||||||||||||    
T  18441498 tc-tcggcagttaactgccgagggggcaaaaacgtattttacttgtgtgtctcagccttatgaaatgtgtcaacaacaattctctt 18441582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 39 - 184
Target Start/End: Complemental strand, 18438712 - 18438566
Alignment:
Q  39 aattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccg-aggagcaaaaacatattt 137  Q
    |||| ||||||||||||| |||| |||||| || ||||||||||||| ||| ||||| | ||| ||  ||||||||||||| ||| |||||| | |||||    
T  18438712 aattttcggcagttaactcccgaggttttcctcggcagttaactgcagccggttattgaattcctcaacagttaactgccgaaggggcaaaagcgtattt 18438613  T
Q  138 tatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctctt 184  Q
    || ||||||||  ||| ||||||||||||||||| ||||||||||||    
T  18438612 tacttgtgtgcatcagccttatgcaatgtgtcaacaacaattctctt 18438566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 41858080 - 41858260
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaattt 100  Q
    ||||||||||||||||||||||||||||||| | |||| ||  ||| ||||||||| |||| |  ||| || ||||||||||||| ||| || || | ||    
T  41858080 taatggatgagagagcttctgccagatttgtagcagaagatcctcgacagttaactcccgagg--ttcctcggcagttaactgcagccggtttttgaatt 41858177  T
Q  101 cttctgcagttaactgccga-ggagcaaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
    ||||  |||||||||||||| || |||||||| ||||||| | ||||  | ||| | |||| |||||||||| ||||||||||    
T  41858178 cttcgccagttaactgccgagggggcaaaaacgtattttactcgtgtttctcagccatatgaaatgtgtcaacaacaattctc 41858260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 41274708 - 41274625
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    ||||||||||||||||||||||||||||| | |||||| ||| ||||||||||||||||||  ||||| || ||| ||||||||    
T  41274708 taatggatgagagagcttctgccagatttatagtagaagattctcggcagttaactaccgagattttcctcggcaattaactgc 41274625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 44 - 122
Target Start/End: Original strand, 42605234 - 42605312
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgagg 122  Q
    |||||||||||||||||| ||||||||| ||||||||||||| |||||| || | ||||||  ||||||||||||||||    
T  42605234 tcggcagttaactaccgatgttttcatcggcagttaactgcagccgatttttgaattcttcgacagttaactgccgagg 42605312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 26451596 - 26451515
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaact 82  Q
    |||| |||||||||||||||||||||||||| | |||| ||  |||||||||||||||||| |||||| || ||||||||||    
T  26451596 taatagatgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccgaggttttcctcggcagttaact 26451515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 139
Target Start/End: Complemental strand, 41855441 - 41855345
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgagga-gcaaaaacatatttta 139  Q
    |||| ||||||||||||| |||||| || ||||||||||||| |||||| || | ||||||  ||||||||||||||||| |||||||| |||||||    
T  41855441 tcggtagttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcttcgacagttaactgccgaggaggcaaaaacgtatttta 41855345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 42602576 - 42602457
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaattt 100  Q
    |||||||||||| | ||| || |||||||||   |||| ||  |||||||||||||||||| |||||| || ||||||||||||| ||| || || | ||    
T  42602576 taatggatgagacaacttatgtcagatttgtatcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcatccggtttttgaatt 42602477  T
Q  101 cttctgcagttaactgccga 120  Q
    |||| |||||||||||||||    
T  42602476 cttcggcagttaactgccga 42602457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 179
Target Start/End: Complemental strand, 7168161 - 7168025
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatattttattt 142  Q
    |||| ||| ||||||||| |||||| || ||||||||||||| ||| || || | |||||| |||| |||| | ||| || |||||| | ||||||| ||    
T  7168161 tcggtagtcaactaccgaggttttcctcggcagttaactgcagccggtttttgaattcttcggcagctaacagtcgagggggcaaaatcgtattttactt 7168062  T
Q  143 gtgtgccgcagtcttatgcaatgtgtcaaaaacaatt 179  Q
    ||||||| ||| |||||| |||||||||| |||||||    
T  7168061 gtgtgcctcagccttatgaaatgtgtcaacaacaatt 7168025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 147
Target Start/End: Complemental strand, 22577738 - 22577634
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatattttattt 142  Q
    |||||||||||||||||| |||||| ||  |||||||||||| || ||| || | ||| || ||| ||||||||||| ||| ||||||| ||||||||||    
T  22577738 tcggcagttaactaccgaggttttcctcgacagttaactgcaaccaatttttgaattcctcagcaattaactgccgagggaacaaaaacgtattttattt 22577639  T
Q  143 gtgtg 147  Q
    |||||    
T  22577638 gtgtg 22577634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 169
Target Start/End: Original strand, 38872932 - 38873056
Alignment:
Q  46 ggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgaggag-caaaaacatattttatttgt 144  Q
    ||||||||| |||||| |||||| || ||||||||||||| ||| || |||| ||| || | ||||||||| ||||| | |||||| || ||||| ||||    
T  38872932 ggcagttaattaccgaggttttcctcggcagttaactgcagccggtttttaaattcctcggtagttaactgacgaggggacaaaaatattttttacttgt 38873031  T
Q  145 gtgccgcagtcttatgcaatgtgtc 169  Q
    ||||  ||| |||||||||||||||    
T  38873032 gtgcatcagccttatgcaatgtgtc 38873056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 171
Target Start/End: Complemental strand, 3395936 - 3395837
Alignment:
Q  73 gcagttaactgcacccgattattaatttcttctgcagttaactgccgaggag-caaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaa 171  Q
    |||||||||||||  | ||| |||| ||| || |||||||||||| |||| | ||||||||||||||| ||||||||| ||  |||||| ||||||||||    
T  3395936 gcagttaactgcaatcaatttttaaattcctcggcagttaactgctgagggggcaaaaacatattttacttgtgtgcctcaaccttatgaaatgtgtcaa 3395837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 18205864 - 18205781
Alignment:
Q  39 aattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgagg 122  Q
    |||| |||||||||||||||||| |||||| |  ||||||||||||| ||| || || | |||||| ||||||||| |||||||    
T  18205864 aattctcggcagttaactaccgaggttttccttggcagttaactgcagccggtttttgaattcttcggcagttaaccgccgagg 18205781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 184
Target Start/End: Original strand, 34823016 - 34823157
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccg-attattaatttcttctgcagttaactgccgaggag-caaaaacatattttatt 141  Q
    |||||||||||||||||| |||||| ||  || ||||||||| ||| ||| |||||| || |  |||||||||||||||  | ||||||| ||| |||      
T  34823016 tcggcagttaactaccgaggttttcctcgacaattaactgcagccgtatttttaattcct-cgacagttaactgccgagaggacaaaaacgtatattacg 34823114  T
Q  142 tgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctctt 184  Q
    |||||||| ||  ||||| ||||||||||| ||||||||||||    
T  34823115 tgtgtgcctcaaccttatacaatgtgtcaacaacaattctctt 34823157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 7121786 - 7121827
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||| ||||||||||| ||||||||||||||||    
T  7121786 tcggcagttaactgccgaagttttcctcagcagttaactgca 7121827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 28646247 - 28646320
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgc 117  Q
    |||| |||||||| ||||||||||| || ||||||||||||| |||||| |||| ||| || ||| ||||||||    
T  28646247 tcggtagttaactgccgaagttttcctcggcagttaactgcagccgatttttaaattcctcggcaattaactgc 28646320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 28650831 - 28650904
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgc 117  Q
    |||| |||||||| ||||||||||| || ||||||||||||| |||||| |||| ||| || ||| ||||||||    
T  28650831 tcggtagttaactgccgaagttttcctcggcagttaactgcagccgatttttaaattcctcggcaattaactgc 28650904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 43262494 - 43262453
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||||||||||||||| || |||||||||||||    
T  43262494 tcggcagttaactaccgaagttttcctcggcagttaactgca 43262453  T

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Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 43520776 - 43520824
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgatt 92  Q
    |||| |||||||| ||||||||||| |||||||||||||||| ||||||    
T  43520776 tcggtagttaactgccgaagttttcctcagcagttaactgcagccgatt 43520824  T

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Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 184
Target Start/End: Complemental strand, 45454450 - 45454338
Alignment:
Q  73 gcagttaactgcacccgattattaatttcttctgcagttaactgccgaggag-caaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaa 171  Q
    ||||||||||||| |||  | | || ||| || ||||||||||||||||||| ||||| | ||||||| | ||||||| |||||||||  ||||||  ||    
T  45454450 gcagttaactgcatccggatttcaaattcctcggcagttaactgccgaggaggcaaaatcgtattttactagtgtgccacagtcttatcaaatgtgggaa 45454351  T
Q  172 aaacaattctctt 184  Q
     ||||||||||||    
T  45454350 caacaattctctt 45454338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 22547559 - 22547504
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaact 56  Q
    |||| |||||||||||||||||||||||||| |||||| ||  |||| ||||||||    
T  22547559 taattgatgagagagcttctgccagatttgtagtagaagatcctcggtagttaact 22547504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 21406340 - 21406262
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgagg 122  Q
    ||||||||||||||||||||||||| || | ||||||||||| ||| ||  | | ||| || |||||||||||| ||||    
T  21406340 tcggcagttaactaccgaagttttcctcggtagttaactgcagccggtttatgaattcctcggcagttaactgcagagg 21406262  T

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Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 21800832 - 21800754
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgagg 122  Q
    ||||||||||||||||||||||||| || | ||||||||||| ||| ||  | | ||| || |||||||||||| ||||    
T  21800832 tcggcagttaactaccgaagttttcctcggtagttaactgcagccggtttatgaattcctcggcagttaactgcagagg 21800754  T

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Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 22550865 - 22550906
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||| |||||| || |||||||||||||    
T  22550865 tcggcagttaactaccgaggttttcctcggcagttaactgca 22550906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 34892809 - 34892850
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||| ||||||||||| || |||||||||||||    
T  34892809 tcggcagttaactgccgaagttttcctcggcagttaactgca 34892850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 40077250 - 40077291
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||| |||||| || |||||||||||||    
T  40077250 tcggcagttaactaccgaggttttcctcggcagttaactgca 40077291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 40740979 - 40740938
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||| ||||||||||| || |||||||||||||    
T  40740979 tcggcagttaactgccgaagttttcctcggcagttaactgca 40740938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 41016487 - 41016446
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||| |||||| || |||||||||||||    
T  41016487 tcggcagttaactaccgaggttttcctcggcagttaactgca 41016446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 184552 - 184592
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  184552 tcggcagttaactaccgaggttttcctcggcagttaactgc 184592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 8419477 - 8419437
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  8419477 tcggcagttaactaccgaggttttcctcggcagttaactgc 8419437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 26663033 - 26663073
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  26663033 tcggcagttaactaccgaggttttcctcggcagttaactgc 26663073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 29034117 - 29034081
Alignment:
Q  49 agttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  29034117 agttaaccaccgaagttttcatcggcagttaactgca 29034081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 32375724 - 32375684
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  32375724 tcggcagttaactaccgaggttttcctcggcagttaactgc 32375684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 32383205 - 32383253
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgatt 92  Q
    |||||||||||||||||| |||||| || | ||||||||||| ||||||    
T  32383205 tcggcagttaactaccgaggttttcctcggtagttaactgcagccgatt 32383253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 32437160 - 32437208
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgatt 92  Q
    |||||||||||||||||| |||||| || | ||||||||||| ||||||    
T  32437160 tcggcagttaactaccgaggttttcctcggtagttaactgcagccgatt 32437208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 39 - 182
Target Start/End: Complemental strand, 46141860 - 46141716
Alignment:
Q  39 aattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgag-gagcaaaaacatattt 137  Q
    |||| |||||||||||||||||| |||||| || ||||||||||||| ||| ||||| | ||| || |||||||||||||||| | |||||| | |||||    
T  46141860 aattttcggcagttaactaccgatgttttcctcggcagttaactgcagccggttattgaattcctcggcagttaactgccgagagggcaaaatcgtattt 46141761  T
Q  138 tatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
    || |||||| || ||| |||||||||| |||||| ||||||||||    
T  46141760 tacttgtgtacctcagccttatgcaatatgtcaacaacaattctc 46141716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 182
Target Start/End: Original strand, 18975115 - 18975259
Alignment:
Q  39 aattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatattt 137  Q
    |||| ||||||||||||||||||||||||| || ||||||||||||| ||  ||||||| ||| ||  |||||||| ||||| || |||||||| |||||    
T  18975115 aattttcggcagttaactaccgaagttttcctctgcagttaactgcaaccagttattaaattcctcgacagttaaccgccgagggggcaaaaacgtattt 18975214  T
Q  138 tatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
    || |||||| || |||  |||| ||||||||||| ||||||||||    
T  18975215 tacttgtgtacctcagctttatacaatgtgtcaacaacaattctc 18975259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 182
Target Start/End: Original strand, 6437534 - 6437678
Alignment:
Q  39 aattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgag-gagcaaaaacatattt 137  Q
    |||| ||||||| |||||||||| |||||| |  | |||||||||||  |||||||| | ||| || |||||||||||||||| | |||||| | |||||    
T  6437534 aattttcggcagataactaccgaggttttccttggtagttaactgcagtcgattattgacttcctcggcagttaactgccgagagggcaaaagcgtattt 6437633  T
Q  138 tatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
    || ||||||||| |||  |||||||||||||||| ||||||||||    
T  6437634 tacttgtgtgcctcagctttatgcaatgtgtcaacaacaattctc 6437678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 38 - 185
Target Start/End: Original strand, 41804027 - 41804175
Alignment:
Q  38 aaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccg-aggagcaaaaacatatt 136  Q
    ||||| ||| |||||||||||||| |||||| || |||||||||||||  || || || | ||| || |||||||||||||| ||| |||||| | ||||    
T  41804027 aaattttcgacagttaactaccgaggttttcctcggcagttaactgcagtcggtttttgaattcctcggcagttaactgccgaaggggcaaaagcgtatt 41804126  T
Q  137 ttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctcttc 185  Q
    ||| ||||||||| ||| |||||  |||||||||| ||||||| |||||    
T  41804127 ttacttgtgtgcctcagccttataaaatgtgtcaacaacaattttcttc 41804175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 13972178 - 13971997
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaattt 100  Q
    |||| |||||||||||||||||||||||||| | |||| ||  ||||| ||| | |||||| |||||| || || |||||||||| ||  || |||| ||    
T  13972178 taatagatgagagagcttctgccagatttgtagcagaagatcctcggctgtttaataccgaggttttcctcggctgttaactgcagccagtttttaa-tt 13972080  T
Q  101 cttctgcagttaactgccg-aggagcaaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctct 183  Q
    | || |||| ||||||||| ||| |||||||| ||||||| ||||||  | ||| |||||| |||||||||| |||||||||||    
T  13972079 cctcggcag-taactgccgaaggggcaaaaacgtattttacttgtgtttctcagccttatgaaatgtgtcaacaacaattctct 13971997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 6434864 - 6434773
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgatt 92  Q
    ||||||||||||| |||||| |||||||||| | |||| ||  | ||||||||||||||||||||||| | ||||| |||||||| ||||||    
T  6434864 taatggatgagagtgcttctaccagatttgtagcagaagatccttggcagttaactaccgaagttttccttagcagataactgcagccgatt 6434773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 29763176 - 29763242
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagtttt 67  Q
    ||||||||||||||||||||||||||||||| | |||| ||  |||||||||||||||||| |||||    
T  29763176 taatggatgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccgaggtttt 29763242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 179
Target Start/End: Complemental strand, 26633606 - 26633467
Alignment:
Q  38 aaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatatt 136  Q
    ||||| |||||||||||||||||| |||||| || ||||||||||||| ||| || || | |||||| | ||||||   |||| || |||||| | ||||    
T  26633606 aaattttcggcagttaactaccgaggttttcctcggcagttaactgcaaccggtttttgaattcttcggtagttaa---ccgagggggcaaaagcgtatt 26633510  T
Q  137 ttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaatt 179  Q
    ||| ||||||||| ||  |||||| |||||||||| |||||||    
T  26633509 ttacttgtgtgcctcaaccttatgaaatgtgtcaacaacaatt 26633467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 179
Target Start/End: Complemental strand, 36072442 - 36072307
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattatt-aatttcttctgcagttaactgccgaggagcaaaaacatattttattt 142  Q
    |||||||||||||||||| |||||| || ||||||||||||| |||||| || |||||| || |||| ||| | |||  || ||||| | ||||||||||    
T  36072442 tcggcagttaactaccgaggttttcctcggcagttaactgcagccgatttttcaatttc-tcggcagctaattaccggagaacaaaatcgtattttattt 36072344  T
Q  143 gtgtgccgcagtcttatgcaatgtgtcaaaaacaatt 179  Q
    |||||||  |  |||||| |||||||||| |||||||    
T  36072343 gtgtgccttaaccttatgaaatgtgtcaacaacaatt 36072307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 42572714 - 42572774
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccga 61  Q
    ||||||||||||||||||||||||||||||| | |||| ||  ||||||||||||||||||    
T  42572714 taatggatgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccga 42572774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 29435088 - 29434930
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaattt 100  Q
    |||||||||||||| ||||||||| |||||| | | |||||  || ||||||||||||||| ||| ||||| | |||||||||||  || ||||| | ||    
T  29435088 taatggatgagagaacttctgccaaatttgtagca-aaaatcctctgcagttaactaccgaggttgtcatcggaagttaactgcagtcggttattgaatt 29434990  T
Q  101 cttctgcagttaactgccgag-gagcaaaaacatattttatttgtgtgccgcagtcttat 159  Q
    ||||   ||||||||||| || | | |||||| ||||||||| ||||| | |||||||||    
T  29434989 cttcgaaagttaactgccaagagggtaaaaacgtattttattcgtgtgtctcagtcttat 29434930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 182
Target Start/End: Complemental strand, 49924929 - 49924790
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatattttattt 142  Q
    ||||||||||||| |||| | |||| || ||||||||||| | ||| || || | || ||| |||||||| |||||| || |||||||| ||  ||| |     
T  49924929 tcggcagttaactcccgatgatttcctcggcagttaactgtagccggtttttgaatttttcggcagttaattgccgaaggggcaaaaacgtaaattactc 49924830  T
Q  143 gtgtgccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
    ||||||| ||| ||||||||||||||||| ||||||||||    
T  49924829 gtgtgcctcagccttatgcaatgtgtcaacaacaattctc 49924790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 160
Target Start/End: Original strand, 19499115 - 19499227
Alignment:
Q  47 gcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgaggagcaaaaacatattttatttgtgt 146  Q
    ||||||||| || || |||||| || ||||||||||||| |||| | |||| ||  || ||||||||||| ||||| |||||||| ||||||| ||||||    
T  19499115 gcagttaacgactgaggttttcctcggcagttaactgcagccgaattttaaatttctcagcagttaactgtcgagg-gcaaaaacgtattttacttgtgt 19499213  T
Q  147 gccgcagtcttatg 160  Q
    | | ||||||||||    
T  19499214 gtctcagtcttatg 19499227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 139
Target Start/End: Original strand, 13178132 - 13178228
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatatttta 139  Q
    |||||||||||||  ||| |||||| |||||||||||||||| | | || |||| ||  || ||||||||||||||| ||||||||||| |||||||    
T  13178132 tcggcagttaactctcgaggttttcctcagcagttaactgcagctggtttttaaatttctcagcagttaactgccgagggagcaaaaacgtatttta 13178228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 77 - 184
Target Start/End: Complemental strand, 35521654 - 35521546
Alignment:
Q  77 ttaactgcacccgattattaatttcttctgcagttaactgccgag-gagcaaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaaaaac 175  Q
    ||||||||| ||| || || ||||| || |||||||||||||||| | |||||| | ||||||| ||||||||| ||| |||||  |||||||||| |||    
T  35521654 ttaactgcagccggttttttatttcctcggcagttaactgccgagagggcaaaatcgtattttacttgtgtgcctcagccttataaaatgtgtcaacaac 35521555  T
Q  176 aattctctt 184  Q
    |||| ||||    
T  35521554 aattttctt 35521546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 183
Target Start/End: Complemental strand, 1872100 - 1872041
Alignment:
Q  124 gcaaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctct 183  Q
    |||||| ||||||||| | ||||||| ||| ||||||||||||||||| |||||||||||    
T  1872100 gcaaaagcatattttactcgtgtgcctcagccttatgcaatgtgtcaacaacaattctct 1872041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 185
Target Start/End: Complemental strand, 11183255 - 11183117
Alignment:
Q  48 cagttaactaccgaagttttcatcagcagttaactgca-cccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatattttatttgtg 145  Q
    |||||||||||||| |||||| || ||||||||||||| || |||| |||| ||| || ||||||||||| | | ||||||||||| ||||||| | ||     
T  11183255 cagttaactaccgaggttttcctcggcagttaactgcagccggatttttaa-ttcctcagcagttaactgtcaagggagcaaaaacgtattttactcgta 11183157  T
Q  146 tgccgcagtcttatgcaatgtgtcaaaaacaattctcttc 185  Q
    |  | ||| |||||  |||||||||| |||||||||||||    
T  11183156 tttctcagccttatcaaatgtgtcaacaacaattctcttc 11183117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 24364682 - 24364801
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaattt 100  Q
    ||||||||| ||||||||||||||||||||| | |  |    ||||||||||||||  ||| |||||| |||| ||||||||||| |||||| | ||  |    
T  24364682 taatggatgtgagagcttctgccagatttgtagcaagagcgcatcggcagttaactgtcgaggttttcctcagtagttaactgcaaccgattttaaacct 24364781  T
Q  101 cttctgcagttaactgccga 120  Q
    | || |||||||||||||||    
T  24364782 cctcggcagttaactgccga 24364801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27487623 - 27487678
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaact 56  Q
    ||||||||||||||||||||||||||||||| | |||| ||  |||||||||||||    
T  27487623 taatggatgagagagcttctgccagatttgtagcagaagatcctcggcagttaact 27487678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 185
Target Start/End: Complemental strand, 46973281 - 46973135
Alignment:
Q  39 aattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatattt 137  Q
    |||| ||||||||||||||  || |||||| || ||||||||||||| ||| || || | ||| || ||||||||||||| | || |||||| | |||||    
T  46973281 aattctcggcagttaactat-gaggttttcctcggcagttaactgcagccggtttttgaattcctcggcagttaactgccaagggggcaaaatcgtattt 46973183  T
Q  138 tatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctcttc 185  Q
    || ||||||| | ||| || ||| |||||||||| ||||||| |||||    
T  46973182 tacttgtgtgtctcagcctaatgaaatgtgtcaacaacaattttcttc 46973135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 49395714 - 49395659
Alignment:
Q  6 gatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccga 61  Q
    |||||||||||||||||||||||||| | |||| ||  ||||||||||||||||||    
T  49395714 gatgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccga 49395659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 182
Target Start/End: Original strand, 49927517 - 49927652
Alignment:
Q  48 cagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgaggag-caaaaacatattttatttgtgt 146  Q
    |||||||||||||| |||||  || ||||||||||  | ||| || |||| |||||| ||||||||||||||||| | ||||||| ||||||| | ||||    
T  49927517 cagttaactaccgaggtttttctcggcagttaactatagccggtttttaaattcttcggcagttaactgccgaggggacaaaaacgtattttactcgtgt 49927616  T
Q  147 gccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
      | | | | |||| |||||||||| ||||||||||    
T  49927617 ttctcggccatatgaaatgtgtcaacaacaattctc 49927652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 6557988 - 6557910
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgagg 122  Q
    ||||||||||||||||||  ||||| || ||||||||||||| |||| | | || ||| || |||||||||||||||||    
T  6557988 tcggcagttaactaccgagattttcctcggcagttaactgcagccgaatttcaaattcctcggcagttaactgccgagg 6557910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 171
Target Start/End: Original strand, 35527043 - 35527141
Alignment:
Q  74 cagttaactgcacccgattattaatttcttctgcagttaactgccgagga-gcaaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaa 171  Q
    |||||||||||| ||  || || |||||||| ||| ||||||||| || | |||||||| ||||||| ||||||||| ||| |||||| ||||||||||    
T  35527043 cagttaactgcagcctgtttttgatttcttcggcaattaactgccaagaaggcaaaaacgtattttacttgtgtgcctcagccttatgaaatgtgtcaa 35527141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 179
Target Start/End: Complemental strand, 13173913 - 13173773
Alignment:
Q  39 aattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatattt 137  Q
    |||| ||||||||||||| || | |||||| || || |||||||||| ||| || || | |||  | ||||||||||||||| || ||||||   |||||    
T  13173913 aattctcggcagttaactgccaaggttttcctcggctgttaactgcagccggtttttgaattcc-cagcagttaactgccgagggggcaaaatagtattt 13173815  T
Q  138 tatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaatt 179  Q
    || ||||||||| ||| |||||| |||||||||| |||||||    
T  13173814 tacttgtgtgcctcagccttatgaaatgtgtcaacaacaatt 13173773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 121
Target Start/End: Complemental strand, 52802203 - 52802126
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgag 121  Q
    |||||||||||||||||| |||||| || ||||||||||||| |||  | | || ||| || ||||||||||||||||    
T  52802203 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgag 52802126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 20353935 - 20353975
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    ||||||||||||||||||||||||| || ||||||||||||    
T  20353935 tcggcagttaactaccgaagttttcctcggcagttaactgc 20353975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 29425336 - 29425384
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgatt 92  Q
    ||||||||||||||||||||||||| || | ||||||||||| ||||||    
T  29425336 tcggcagttaactaccgaagttttcctcggtagttaactgcaaccgatt 29425384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 184
Target Start/End: Complemental strand, 36908622 - 36908510
Alignment:
Q  73 gcagttaactgcacccgattattaatttcttctgcagttaactgccgagga-gcaaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaa 171  Q
    ||||||||||||| ||| || || | ||||||  ||||||||||||||||| |||||||  ||||||| ||||||||| ||  |||||  ||||||||||    
T  36908622 gcagttaactgcagccggtttttgaattcttcgacagttaactgccgaggaggcaaaaatgtattttacttgtgtgcctcatccttataaaatgtgtcaa 36908523  T
Q  172 aaacaattctctt 184  Q
     | ||||| ||||    
T  36908522 catcaattttctt 36908510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 46217318 - 46217366
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgatt 92  Q
    ||||||||||||||||||||||||| || | ||||||||||| ||||||    
T  46217318 tcggcagttaactaccgaagttttcctcggtagttaactgcagccgatt 46217366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 14174868 - 14174923
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaact 56  Q
    ||||||||||||||||||||||||||||| | | |||| ||  |||||||||||||    
T  14174868 taatggatgagagagcttctgccagatttttagcagaagatcctcggcagttaact 14174923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 182
Target Start/End: Original strand, 29438020 - 29438159
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatattttattt 142  Q
    ||||||||||| |||||| |||||| || | ||||||||||| ||| || || | |  ||||||||||||||||||| || |||||||| ||  |||||     
T  29438020 tcggcagttaattaccgaggttttcctcggtagttaactgcagccggttttttaatatttctgcagttaactgccgagggggcaaaaacgtaaattattc 29438119  T
Q  143 gtgtgccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
    ||||||| ||  |||||  ||||||  || ||||||||||    
T  29438120 gtgtgccacaaccttatcaaatgtgggaacaacaattctc 29438159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 122
Target Start/End: Original strand, 6562161 - 6562239
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgagg 122  Q
    |||||||||||||||||| | |||| || ||||||||||||| |||  | | || ||| || |||||||||||||||||    
T  6562161 tcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagg 6562239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 26637213 - 26637243
Alignment:
Q  1 taatggatgagagagcttctgccagatttgt 31  Q
    |||||||||||||||||||||||||||||||    
T  26637213 taatggatgagagagcttctgccagatttgt 26637243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 148
Target Start/End: Complemental strand, 29261483 - 29261382
Alignment:
Q  48 cagttaactaccgaagttttcatcagcagttaactgcacccgattat-taatttcttctgcagttaactgccgagga-gcaaaaacatattttatttgtg 145  Q
    ||||||||||| || |||||| || |||||||| |||| |||||| |  |||||| ||| ||||||||||||||||| |||||||| ||||||| || ||    
T  29261483 cagttaactactgaggttttcttcggcagttaattgcagccgattttacaatttc-tctacagttaactgccgaggaggcaaaaacgtattttacttctg 29261385  T
Q  146 tgc 148  Q
    |||    
T  29261384 tgc 29261382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 44336322 - 44336276
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccga 90  Q
    |||||||||||||||||| |||||| || ||||||||||||| ||||    
T  44336322 tcggcagttaactaccgaggttttcctcggcagttaactgcagccga 44336276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 122
Target Start/End: Original strand, 44470011 - 44470089
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgagg 122  Q
    ||||||||||||| |||| |||||| || ||||||||||||| |||  | | || ||| || |||||||||||||||||    
T  44470011 tcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagg 44470089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 49927458 - 49927488
Alignment:
Q  1 taatggatgagagagcttctgccagatttgt 31  Q
    |||||||||||||||||||||||||||||||    
T  49927458 taatggatgagagagcttctgccagatttgt 49927488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 3941150 - 3941191
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||||||||||||||| || | |||||||||||    
T  3941150 tcggcagttaactaccgaagttttcctcggtagttaactgca 3941191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 9710651 - 9710610
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||| ||||||||||| || |||||||||||||    
T  9710651 tcggcagttaactcccgaagttttcctcggcagttaactgca 9710610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 13636122 - 13636163
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||| |||||| || |||||||||||||    
T  13636122 tcggcagttaactaccgaggttttcctcggcagttaactgca 13636163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 19054250 - 19054303
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaa 97  Q
    |||||||||||||||||| |||||| |  ||||||||||||| |||||| ||||    
T  19054250 tcggcagttaactaccgaggttttccttggcagttaactgcagccgatttttaa 19054303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 29424453 - 29424412
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||||||||||||||| || | |||||||||||    
T  29424453 tcggcagttaactaccgaagttttcctcggtagttaactgca 29424412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 84
Target Start/End: Complemental strand, 38127530 - 38127493
Alignment:
Q  47 gcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||||||| || ||||||||||||    
T  38127530 gcagttaactaccgaagttttcctcggcagttaactgc 38127493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 44598906 - 44598947
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||| ||||||||||| || |||||||||||||    
T  44598906 tcggcagttaactcccgaagttttcctcggcagttaactgca 44598947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 3728808 - 3728768
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  3728808 tcggcagttaactaccgaggttttcctcggcagttaactgc 3728768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 3940027 - 3939979
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgatt 92  Q
    |||||||||||||||||||||||| ||| | | ||||||||| ||||||    
T  3940027 tcggcagttaactaccgaagtttttatcggtaattaactgcagccgatt 3939979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 3944047 - 3944007
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  3944047 tcggcagttaactaccgaggttttcctcggcagttaactgc 3944007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 3993843 - 3993883
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  3993843 tcggcagttaactaccgaggttttcctcggcagttaactgc 3993883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 8548669 - 8548709
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  8548669 tcggcagttaactaccgaggttttcctcggcagttaactgc 8548709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 13147612 - 13147528
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||||| || | |||||||||| | |||| || |||| |||||||||  ||| |||||| || | |||||||||||    
T  13147612 taatggatgagagagtttttaccagatttgtagcagaagatcatcgacagttaactgtcgaggttttcctcggtagttaactgca 13147528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 35181387 - 35181331
Alignment:
Q  126 aaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
    ||||| |||||||||| ||||||  |||  |||||||||||||||| ||||||||||    
T  35181387 aaaaatatattttattcgtgtgcttcagctttatgcaatgtgtcaacaacaattctc 35181331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 46216471 - 46216423
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgatt 92  Q
    ||||||||||||||||||||||||| ||   ||||||||||| ||||||    
T  46216471 tcggcagttaactaccgaagttttcctcgatagttaactgcagccgatt 46216423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 122
Target Start/End: Original strand, 51289959 - 51290038
Alignment:
Q  43 atcggcagttaactaccgaagttttcatcagcagttaactgc-acccgattattaatttcttctgcagttaactgccgagg 122  Q
    |||||||| |||||||||| |||||| || |||||||||||| ||| |||| |||| ||| || | |||||||||||||||    
T  51289959 atcggcagctaactaccgaggttttcctcggcagttaactgcaaccggatttttaa-ttcctcagtagttaactgccgagg 51290038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 51291693 - 51291729
Alignment:
Q  152 agtcttatgcaatgtgtcaaaaacaattctcttctat 188  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  51291693 agtcttatgcaatgtgtcaacaacaattctctgctat 51291729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 12783914 - 12784074
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaattt 100  Q
    |||||||||||||||||| | |||||||||| | |||| ||  ||||||||||||||| || |||||| ||  ||| |||||||| ||| ||||| | ||    
T  12783914 taatggatgagagagctttttccagatttgtagcagaagatcctcggcagttaactactgaggttttcctcgacagctaactgcagccggttattgaatt 12784013  T
Q  101 cttctgcagttaactgccga-ggagcaaaaacatattttatttgtgtgccgcagtcttatg 160  Q
    | || ||||||||||||||| || |||||| | ||||||| ||||||||| ||| ||||||    
T  12784014 catcggcagttaactgccgatggggcaaaagcgtattttacttgtgtgcctcagccttatg 12784074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 47 - 184
Target Start/End: Complemental strand, 2051098 - 2050961
Alignment:
Q  47 gcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatattttatttgtg 145  Q
    |||| |||||||||| |||||| || ||||||||||||| ||| || | || ||| || ||||||||||||||| ||||||||||| ||||||| | |||    
T  2051098 gcagataactaccgaggttttcctcggcagttaactgcaaccggtt-tcaaattcatcggcagttaactgccgaaggagcaaaaacgtattttactcgtg 2051000  T
Q  146 tgccgcagtcttatgcaatgtgtcaaaaacaattctctt 184  Q
    |||  ||| ||||||||||||||||| | ||||||||||    
T  2050999 tgcatcagccttatgcaatgtgtcaatagcaattctctt 2050961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 13401602 - 13401481
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaattt 100  Q
    ||||||||||||||||||||| || |||||| | |||| ||  |||| ||||||||||| |  ||||| | |||||||||||||| |||||| || | ||    
T  13401602 taatggatgagagagcttctgtcatatttgtagcagaagatcctcggtagttaactaccaatattttccttagcagttaactgcagccgattttttaatt 13401503  T
Q  101 cttctgcagttaactgccgagg 122  Q
    | || |||||||||||||||||    
T  13401502 cctcggcagttaactgccgagg 13401481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 184
Target Start/End: Complemental strand, 29286283 - 29286161
Alignment:
Q  63 gttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgaggag-caaaaacatattttatttgtgtgccgcagtcttatgc 161  Q
    |||||| || ||||||||||||| ||| ||  | ||||| || |||||||||| |||||| | ||||||| ||  ||| ||||||||| ||  |||||||    
T  29286283 gttttcctcggcagttaactgcaaccggtttcttatttcctcggcagttaactaccgagggggcaaaaacgtaaattacttgtgtgcctcaaccttatgc 29286184  T
Q  162 aatgtgtcaaaaacaattctctt 184  Q
    |||||||||| ||||||||||||    
T  29286183 aatgtgtcaacaacaattctctt 29286161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 181
Target Start/End: Original strand, 13404627 - 13404770
Alignment:
Q  39 aattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgaggag-caaaaacatattt 137  Q
    |||| |||||||||||||||| | ||||||  | ||||||||||||| | | ||||| | ||| ||  ||||||||| |||||| | ||||  | |||||    
T  13404627 aattttcggcagttaactaccaaggttttccacggcagttaactgcagcaggttattgaattcctcgacagttaactaccgagggggcaaacgcgtattt 13404726  T
Q  138 tatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattct 181  Q
    || ||||||||| | | |||||||||||||| || |||||||||    
T  13404727 tacttgtgtgcctcggccttatgcaatgtgttaacaacaattct 13404770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 182
Target Start/End: Complemental strand, 18606117 - 18605979
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgaggag-caaaaacatattttattt 142  Q
    ||||||||||| |||||| |||||| || ||||||||||||| ||| |  | || ||| |  |||||||||| |||||| | ||||||| ||||||| |     
T  18606117 tcggcagttaagtaccgaggttttcctcggcagttaactgcagccggtg-tcaaattcctaggcagttaactaccgagggggcaaaaacgtattttactc 18606019  T
Q  143 gtgtgccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
    ||||||| ||| || || ||||||||||| ||||||||||    
T  18606018 gtgtgcctcagcctcatacaatgtgtcaacaacaattctc 18605979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 182
Target Start/End: Complemental strand, 7361258 - 7361125
Alignment:
Q  50 gttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgaggag-caaaaacatattttatttgtgtgc 148  Q
    |||||||||||| | |||| || ||||||||||||| ||| || ||||  || || |||||||| |||||| | | ||||||| ||  ||| | ||||||    
T  7361258 gttaactaccgaggatttcctcggcagttaactgcagccggtttttaaaatcctcagcagttaattgccgacgggacaaaaacgtaaattactcgtgtgc 7361159  T
Q  149 cgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
    | ||| ||||||||||||||||| | ||||||||    
T  7361158 cacagccttatgcaatgtgtcaacagcaattctc 7361125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 179
Target Start/End: Complemental strand, 23958963 - 23958827
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattat-taatttcttctgcagttaactgccgaggag-caaaaacatattttatt 141  Q
    |||||||||||||||||| |||||| || ||| ||||||||| ||| || |  |||||| || ||||||||||||||||| | ||||||| ||||||| |    
T  23958963 tcggcagttaactaccgaggttttcctcggcatttaactgcagccggttttggaatttc-tcggcagttaactgccgaggggacaaaaacgtattttagt 23958865  T
Q  142 tgtgtgccgcagtcttatgcaatgtgtcaaaaacaatt 179  Q
    || ||| | ||| |||||   ||||||||| |||||||    
T  23958864 tgggtgtctcagccttatcatatgtgtcaacaacaatt 23958827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 29076323 - 29076364
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  29076323 tcggcagttaactaccgaggttttcctcagcagttaactgca 29076364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 29097828 - 29097869
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  29097828 tcggcagttaactaccgaagtttttctcagcagttaactgca 29097869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 29109856 - 29109897
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  29109856 tcggcagttaactaccgaggttttcctcagcagttaactgca 29109897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 29111296 - 29111337
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  29111296 tcggcagttaactaccgaggttttcctcagcagttaactgca 29111337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 11157779 - 11157735
Alignment:
Q  48 cagttaactaccgaagttttcatcagcagttaactgcacccgatt 92  Q
    ||||||||||| ||||||||| |||||||||||||||| ||||||    
T  11157779 cagttaactactgaagttttcctcagcagttaactgcagccgatt 11157735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 34801548 - 34801480
Alignment:
Q  106 gcagttaactgccgaggag-caaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaaaa 173  Q
    ||||||||||||||||||| ||||||| ||||||| |||||| || |||  ||||| ||||||||||||    
T  34801548 gcagttaactgccgaggagacaaaaacgtattttacttgtgttcctcagcattatgtaatgtgtcaaaa 34801480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 14124723 - 14124766
Alignment:
Q  49 agttaactaccgaagttttcatcagcagttaactgcacccgatt 92  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||    
T  14124723 agttaactaccgaagttttcctcagcaattaactgcagccgatt 14124766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 25141142 - 25141219
Alignment:
Q  107 cagttaactgccga--ggagcaaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctct 183  Q
    ||||||||||||||  ||| |||||| |||  ||||| ||||||| ||| ||||||||||||||||| |||||||||||    
T  25141142 cagttaactgccgaatgga-caaaaatataaattattcgtgtgcctcagccttatgcaatgtgtcaacaacaattctct 25141219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 31768826 - 31768748
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca-cccgattattaatttcttctgcagttaactgccgagg 122  Q
    |||||||||||||||||| |||||| || ||| ||||||||| || |||| |||| ||| || |||||||||||||||||    
T  31768826 tcggcagttaactaccgaggttttcctcggcaattaactgcagccggatttttaa-ttcctcggcagttaactgccgagg 31768748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32034349 - 32034404
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaact 56  Q
    |||||||| ||||| |||||||||||||||| | |||| || ||||||||||||||    
T  32034349 taatggataagagatcttctgccagatttgtagcagaagatcatcggcagttaact 32034404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 32643523 - 32643601
Alignment:
Q  46 ggcagttaactaccgaagttttcatcagcagttaactgca-cccgattattaatttcttctgcagttaactgccgaggag 124  Q
    |||||||||||||||| |||||| ||  |||||||||||| || |||| |||||| |||  |||||||||||||||||||    
T  32643523 ggcagttaactaccgaggttttcctcgacagttaactgcagccggatttttaattcctt-ggcagttaactgccgaggag 32643601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 26856011 - 26855981
Alignment:
Q  1 taatggatgagagagcttctgccagatttgt 31  Q
    |||||||||||||||||||||||||||||||    
T  26856011 taatggatgagagagcttctgccagatttgt 26855981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 32222596 - 32222554
Alignment:
Q  50 gttaactaccgaagttttcatcagcagttaactgcacccgatt 92  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||    
T  32222596 gttaactaccgaagttttcctcagtagttaactgcagccgatt 32222554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 6204900 - 6204859
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||| |||||| || |||||||||||||    
T  6204900 tcggcagttaactaccgaggttttcctcggcagttaactgca 6204859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 9048148 - 9048107
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||||||||||||||| || | |||||||||||    
T  9048148 tcggcagttaactaccgaagttttcctcggtagttaactgca 9048107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 9049084 - 9049125
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||||||||||||||| || | |||||||||||    
T  9049084 tcggcagttaactaccgaagttttcctcggtagttaactgca 9049125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 11691867 - 11691826
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||| |||||| || |||||||||||||    
T  11691867 tcggcagttaactaccgaggttttcctcggcagttaactgca 11691826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 13616309 - 13616272
Alignment:
Q  48 cagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  13616309 cagttaactaccgaagttttctttagcagttaactgca 13616272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 22305181 - 22305140
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||| |||||| || |||||||||||||    
T  22305181 tcggcagttaactaccgaggttttcctcggcagttaactgca 22305140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 2110455 - 2110503
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgatt 92  Q
    |||| |||| ||| ||||||||||| |||||||||||||||| ||||||    
T  2110455 tcggtagtttactgccgaagttttcctcagcagttaactgcagccgatt 2110503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 146
Target Start/End: Original strand, 6320552 - 6320592
Alignment:
Q  107 cagttaactgccgaggag-caaaaacatattttatttgtgt 146  Q
    |||||||||||||||||| ||||||||||||||||| ||||    
T  6320552 cagttaactgccgaggagacaaaaacatattttattcgtgt 6320592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 13382702 - 13382662
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  13382702 tcggcagttaactaccgaggttttcctcggcagttaactgc 13382662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 17597524 - 17597564
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    ||||||||||||| ||||||||||| || ||||||||||||    
T  17597524 tcggcagttaactcccgaagttttcctcggcagttaactgc 17597564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 18351643 - 18351683
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  18351643 tcggcagttaactaccgaggttttcctcggcagttaactgc 18351683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 26701861 - 26701797
Alignment:
Q  108 agttaactgccgag-gagcaaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaa 171  Q
    ||||||||| |||| | |||||| ||||||||||||||||||| ||| || ||| ||||||||||    
T  26701861 agttaactgtcgagtgggcaaaatcatattttatttgtgtgcctcagcctaatgaaatgtgtcaa 26701797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 26712121 - 26712081
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  26712121 tcggcagttaactaccgaggttttcctcggcagttaactgc 26712081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 27616788 - 27616748
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  27616788 tcggcagttaactaccgaggttttcttcggcagttaactgc 27616748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 28249958 - 28249918
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  28249958 tcggcagttaactaccgaggttttcctcggcagttaactgc 28249918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 32223513 - 32223561
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgatt 92  Q
    ||||||||||||||||||||||||| || |  |||||||||| ||||||    
T  32223513 tcggcagttaactaccgaagttttcctcggtggttaactgcagccgatt 32223561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 6e-19; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 44 - 171
Target Start/End: Complemental strand, 35490753 - 35490625
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgagga-gcaaaaacatattttattt 142  Q
    |||||||||||||||| | |||||| |||||||||||||||| ||| || || | |||||| ||||||||| | |||||| |||||||  ||||||| |     
T  35490753 tcggcagttaactaccaaggttttcttcagcagttaactgcagccggtttttgaattcttcggcagttaaccgtcgaggaggcaaaaatgtattttactc 35490654  T
Q  143 gtgtgccgcagtcttatgcaatgtgtcaa 171  Q
    ||||| | ||| |||||||||||||||||    
T  35490653 gtgtgtctcagccttatgcaatgtgtcaa 35490625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 43491225 - 43491110
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaattt 100  Q
    ||||||||||||||||||||||||||||| |   |||| ||| |||||||||||||||| | |||||| ||  ||||||| |||| ||| ||||||| ||    
T  43491225 taatggatgagagagcttctgccagatttataacagaagattctcggcagttaactaccaaggttttcctcgacagttaattgcagccggttattaaatt 43491126  T
Q  101 cttctgcagttaactg 116  Q
    | || |||||||||||    
T  43491125 cctcggcagttaactg 43491110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 24512283 - 24512101
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaattt 100  Q
    ||||||||||||||||||||||||||||||| | |||| ||  |||||||||||||||||| |||||  || ||| ||||||||| | | || || | ||    
T  24512283 taatggatgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccgaggtttttttcggcaattaactgcagctggttttttaatt 24512184  T
Q  101 cttctgcagttaactgccga-ggagcaaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
    | ||  |||||||||| ||| || | |||||| ||||||| ||||||  | ||| | |||| |||||||||| | ||||||||    
T  24512183 cctcaacagttaactgtcgagggggtaaaaacgtattttacttgtgtttctcagccatatgaaatgtgtcaagagcaattctc 24512101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 186
Target Start/End: Original strand, 35493335 - 35493484
Alignment:
Q  38 aaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatatt 136  Q
    ||||| ||||||||||||||||||  ||||| || ||||||||||||| | | || || | ||| || |||||||||| |||| || |||||| | ||||    
T  35493335 aaattttcggcagttaactaccgatattttcctcggcagttaactgcagctggtttttgaattcctcggcagttaactaccgagggggcaaaagcgtatt 35493434  T
Q  137 ttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctcttct 186  Q
    ||| | ||||| | ||  ||||||||||||||||| ||||||||||||||    
T  35493435 ttactcgtgtgtctcaaccttatgcaatgtgtcaacaacaattctcttct 35493484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 184
Target Start/End: Complemental strand, 2917762 - 2917615
Alignment:
Q  38 aaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattatt-aatttcttctgcagttaactgccga-ggagcaaaaacatat 135  Q
    ||||| ||| ||||||||||| || |||||| || ||||||||||| | ||| || || |||||| || ||||||||||||||| || |||||||| |||    
T  2917762 aaattttcgacagttaactactgaggttttcctcggcagttaactgtagccggtttttcaatttc-tcggcagttaactgccgagggggcaaaaacgtat 2917664  T
Q  136 tttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctctt 184  Q
    |||| || |||||| ||| |||||| |||||||||| ||||||| ||||    
T  2917663 tttacttttgtgcctcagccttatgaaatgtgtcaacaacaattttctt 2917615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 41500191 - 41500275
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||| |||||||||||| | |||| ||  |||||||||||||||||| |||||  || |||||||||||||    
T  41500191 taatggatgagagagcttatgccagatttgtagcagaagatcctcggcagttaactaccgaggtttttctcggcagttaactgca 41500275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 44 - 182
Target Start/End: Original strand, 25184830 - 25184968
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatattttattt 142  Q
    |||||||||||||||||| |||||| || ||||||||||||| ||| || | || ||| ||  ||||||||||| || || |||||||| ||||||| |     
T  25184830 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggtt-tcaaattcctcgacagttaactgctgagggggcaaaaacgtattttactc 25184928  T
Q  143 gtgtgccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
    ||||||| ||  |||||||||| |||||| ||||||||||    
T  25184929 gtgtgcctcaaccttatgcaatctgtcaacaacaattctc 25184968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 34921754 - 34921854
Alignment:
Q  39 aattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattatt-aatttcttctgcagttaactgccgaggagcaaaaacatattt 137  Q
    |||| |||||||||||||||||| |||||| |||||||||||||||| ||| || || |||||| || |||||||||| ||| || |||||||| |||||    
T  34921754 aattctcggcagttaactaccgaggttttcctcagcagttaactgcagccggtttttgaatttc-tcggcagttaactaccggggggcaaaaacgtattt 34921852  T
Q  138 ta 139  Q
    ||    
T  34921853 ta 34921854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 44 - 184
Target Start/End: Original strand, 41008928 - 41009068
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgagga-gcaaaaacatattttattt 142  Q
    ||||||||||||||||||||||||| || |||||||| |||| ||| |||  || ||| || |||||||||||||||||| |||||||| ||  ||| |     
T  41008928 tcggcagttaactaccgaagttttcctcggcagttaaatgcagccggtta-caaattcctcggcagttaactgccgaggaggcaaaaacgtaaattactc 41009026  T
Q  143 gtgtgccgcagtcttatgcaatgtgtcaaaaacaattctctt 184  Q
    ||||| | | |||||||  ||||||||||  |||||||||||    
T  41009027 gtgtgtctcggtcttatcaaatgtgtcaatgacaattctctt 41009068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 2920473 - 2920533
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccga 61  Q
    ||||||||||||||||||||||||||||||| | |||| ||  ||||||||||||||||||    
T  2920473 taatggatgagagagcttctgccagatttgtagcagaagatcctcggcagttaactaccga 2920533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 63 - 182
Target Start/End: Complemental strand, 41181491 - 41181371
Alignment:
Q  63 gttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgaggag-caaaaacatattttatttgtgtgccgcagtcttatgc 161  Q
    |||||| || |||||||| || | ||| ||||| | ||| || ||||||||||||||||| | ||||||| ||||||| | ||||||| ||| |||||||    
T  41181491 gttttcctcggcagttaaatgtagccggttattgaattcctcggcagttaactgccgagggggcaaaaacgtattttactcgtgtgcctcagccttatgc 41181392  T
Q  162 aatgtgtcaaaaacaattctc 182  Q
    |||||||||| | ||||||||    
T  41181391 aatgtgtcaacatcaattctc 41181371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 181
Target Start/End: Complemental strand, 41004601 - 41004464
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgagg-agcaaaaacatattttattt 142  Q
    ||||||||||||||||||||||||  || ||||||||||||| ||| |||  || ||| || ||||||||||||||||| ||||||||| ||  ||| |     
T  41004601 tcggcagttaactaccgaagtttttttcggcagttaactgcagccggtta-caaattcctcggcagttaactgccgaggaagcaaaaacgtaaattactc 41004503  T
Q  143 gtgtgccgcagtcttatgcaatgtgtcaaaaacaattct 181  Q
    || |||  ||| ||||| ||||||||||| ||| |||||    
T  41004502 gtatgcatcagccttatacaatgtgtcaacaacgattct 41004464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 49 - 182
Target Start/End: Complemental strand, 41497540 - 41497406
Alignment:
Q  49 agttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgagg-agcaaaaacatattttatttgtgtg 147  Q
    ||||||||||||| |||||| || ||| ||||||||| ||| || || | |||||| |||||||| || |||||  |||||||| ||  ||| | |||||    
T  41497540 agttaactaccgaggttttcctcggcaattaactgcagccggtttttgaattcttcggcagttaagtgtcgaggtggcaaaaacgtaaattactcgtgtg 41497441  T
Q  148 ccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
    || ||| ||||||||||||||||| | ||||||||    
T  41497440 cctcagccttatgcaatgtgtcaagagcaattctc 41497406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 171
Target Start/End: Complemental strand, 45475518 - 45475385
Alignment:
Q  39 aattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattatt-aatttcttctgcagttaactgccga-ggagcaaaaacatatt 136  Q
    |||| |||| ||||||||||||| |||||| || ||||||||||| | ||| || || |||||| || ||||||||||||||| || |||||| | ||||    
T  45475518 aattctcggaagttaactaccgaggttttcctcggcagttaactgtagccggtttttgaatttc-tcggcagttaactgccgagggggcaaaatcgtatt 45475420  T
Q  137 ttatttgtgtgccgcagtcttatgcaatgtgtcaa 171  Q
    ||| ||||||| | ||| |||||| ||||||||||    
T  45475419 ttacttgtgtgtctcagccttatgaaatgtgtcaa 45475385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 2648233 - 2648152
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaact 82  Q
    |||| |||||||||| ||||||||||||||| | |||| || ||||||| |||||||||||  ||||| || ||||||||||    
T  2648233 taattgatgagagagtttctgccagatttgtagcagaagatcatcggcaattaactaccgagattttcctcggcagttaact 2648152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 124
Target Start/End: Original strand, 45137432 - 45137513
Alignment:
Q  43 atcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgaggag 124  Q
    ||||||||||||||| ||||||||||||| ||||||||||||| |||| | || | ||| || ||| ||||||||| |||||    
T  45137432 atcggcagttaactatcgaagttttcatcggcagttaactgcagccgaatttttaattcctcggcaattaactgccaaggag 45137513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 131
Target Start/End: Original strand, 7189951 - 7190038
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca-cccgattattaatttcttctgcagttaactgccgaggagcaaaaac 131  Q
    ||||||||||||||||||||||||| || ||||||||||||| || ||||  |||   |||| ||||||||||||||||| ||||||||    
T  7189951 tcggcagttaactaccgaagttttcctcggcagttaactgcagccggatttctaa-aacttcggcagttaactgccgaggggcaaaaac 7190038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 122
Target Start/End: Original strand, 34639314 - 34639392
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca-cccgattattaatttcttctgcagttaactgccgagg 122  Q
    ||||||||||||| |||| |||||| |||||||||||||||| || |||| |||||||| || ||||||| |||||||||    
T  34639314 tcggcagttaactcccgatgttttcctcagcagttaactgcagccggatttttaatttc-tcggcagttacctgccgagg 34639392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 10365749 - 10365843
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattatt 95  Q
    |||||||||||||||||| |||||||||||| | | || ||  |||||| ||||||||| | |||||| || |||||||||| || ||| |||||    
T  10365749 taatggatgagagagcttatgccagatttgtagcaaaagatcctcggcatttaactaccaaggttttcctcggcagttaactacagccggttatt 10365843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 160
Target Start/End: Original strand, 19187223 - 19187340
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc-acccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatattttatt 141  Q
    |||||||||||||||||| |||||| || |||| ||||||| ||  |||| | |||||| || ||||||||||||||| || |||||||| ||||||| |    
T  19187223 tcggcagttaactaccgaggttttcctcggcaggtaactgcaactggattttgaatttc-tcggcagttaactgccgagggggcaaaaacgtattttact 19187321  T
Q  142 tgtgtgccgcagtcttatg 160  Q
    |||||| | ||| ||||||    
T  19187322 tgtgtgtctcagccttatg 19187340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 39393153 - 39393087
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagtttt 67  Q
    ||||||||||||||||||||  ||||||||| |||||| ||  ||| |||||||||||||| |||||    
T  39393153 taatggatgagagagcttctatcagatttgtagtagaagatcctcgacagttaactaccgaggtttt 39393087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 182
Target Start/End: Complemental strand, 43943762 - 43943627
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgaggagcaaaaa-catattttattt 142  Q
    ||||||||||||||||||  ||||| ||  |||||||||||| ||| ||||||| ||| ||   |||||||||| |||| | ||||| | ||||||||||    
T  43943762 tcggcagttaactaccgagtttttcctcgacagttaactgcagccggttattaaattcctcgagagttaactgctgagggggaaaaatcgtattttattt 43943663  T
Q  143 gtgtgccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
    ||||||  |||     ||||||||||||| ||||||||||    
T  43943662 gtgtgcttcag----ctgcaatgtgtcaacaacaattctc 43943627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 29093792 - 29093869
Alignment:
Q  8 tgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||||||||| | |||| ||  ||||||||||||| || | |||||| || ||| |||||||||    
T  29093792 tgagagagcttctgccagatttgtagcagaagatcctcggcagttaactgccaaggttttcctcggcaattaactgca 29093869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 30271143 - 30271106
Alignment:
Q  48 cagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  30271143 cagttaactaccgaagttttcctcagcagttaactgca 30271106  T

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Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 34638253 - 34638138
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaattt 100  Q
    ||||||||||||||||||||   |||||||| | |||| ||  ||| || |||||||||||||||||| || ||||||||||| |||  |||  ||| ||    
T  34638253 taatggatgagagagcttct---agatttgtagcagaagatcctcgacaattaactaccgaagttttcctcggcagttaactgaaccgaatttctaa-tt 34638158  T
Q  101 cttctgcagttaactgccga 120  Q
    | || |||||||||||||||    
T  34638157 cctcggcagttaactgccga 34638138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 184
Target Start/End: Original strand, 24607597 - 24607709
Alignment:
Q  73 gcagttaactgcacccgattattaatttcttctgcagttaactgccgaggagcaaaaa-catattttatttgtgtgccgcagtcttatgcaatgtgtcaa 171  Q
    ||||||||||||| ||| || || |  ||||| |||||||||||| |||| | ||||| | ||  |||  |||||||| ||| |||||||||||||||||    
T  24607597 gcagttaactgcagccggttttttaaatcttcggcagttaactgctgagggggaaaaaacgtaaattacctgtgtgcctcagccttatgcaatgtgtcaa 24607696  T
Q  172 aaacaattctctt 184  Q
     ||||||||||||    
T  24607697 caacaattctctt 24607709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 33222689 - 33222607
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgaggagca 126  Q
    ||||||||||||| ||||||||||| || ||||||||||||| ||| || || |    ||| | |||||||||||||||||||    
T  33222689 tcggcagttaactgccgaagttttcctcggcagttaactgcagccggttctttaaaatttcggtagttaactgccgaggagca 33222607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 186
Target Start/End: Complemental strand, 41052705 - 41052611
Alignment:
Q  93 attaatttcttctgcagttaactgccgaggag-caaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctcttct 186  Q
    |||| |||| || ||| ||||||||||||| | ||||||| ||  ||| ||||||||  ||| |||||||||| |||||| ||||||||||||||    
T  41052705 attattttcctcggcaattaactgccgaggggacaaaaacgtaaattacttgtgtgcatcagccttatgcaatatgtcaacaacaattctcttct 41052611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 122
Target Start/End: Original strand, 41183224 - 41183301
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgagg 122  Q
    |||||||||||||||||| |||||| || | ||||||||||| ||| || | || |||||| |||||||| ||||||||    
T  41183224 tcggcagttaactaccgaggttttcctcggtagttaactgcagccggtt-tcaaattcttcggcagttaattgccgagg 41183301  T

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Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 182
Target Start/End: Complemental strand, 16580552 - 16580479
Alignment:
Q  110 ttaactgccgaggag-caaaaacatattttatttgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
    ||||||| ||||||| ||||||  ||||||| | ||||| | ||| ||||||||||||||||| ||||||||||    
T  16580552 ttaactgtcgaggaggcaaaaatgtattttactcgtgtgtctcagccttatgcaatgtgtcaacaacaattctc 16580479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 17424205 - 17424164
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||| |||||| || |||||||||||||    
T  17424205 tcggcagttaactaccgaggttttcctcggcagttaactgca 17424164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 26543989 - 26544030
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||| |||||| |||| |||||||||||    
T  26543989 tcggcagttaactaccgaggttttcctcagtagttaactgca 26544030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 84
Target Start/End: Complemental strand, 39947669 - 39947632
Alignment:
Q  47 gcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||||||| || ||||||||||||    
T  39947669 gcagttaactaccgaagttttcctcggcagttaactgc 39947632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 43982272 - 43982231
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    |||||||||||||||||| |||||| || |||||||||||||    
T  43982272 tcggcagttaactaccgaggttttcctcggcagttaactgca 43982231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 22003401 - 22003441
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  22003401 tcggcagttaactaccgaggttttcctcggcagttaactgc 22003441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 179
Target Start/End: Complemental strand, 28342596 - 28342460
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccga-ggagcaaaaacatattttattt 142  Q
    |||||||||||||||| |   |||| || |||||||| |||| ||| || || | ||||||  |||||||||||||| || |||||||| ||  ||| ||    
T  28342596 tcggcagttaactaccaagaatttcctcggcagttaattgcagccggtttttgaattcttcgacagttaactgccgaaggggcaaaaacgtaaattactt 28342497  T
Q  143 gtgtgccgcagtcttatgcaatgtgtcaaaaacaatt 179  Q
     |||| |  || ||||||||||||||||| |||||||    
T  28342496 atgtgtcttagccttatgcaatgtgtcaacaacaatt 28342460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 28468714 - 28468674
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  28468714 tcggcagttaactaccgaggttttcctcggcagttaactgc 28468674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 126
Target Start/End: Original strand, 39951204 - 39951232
Alignment:
Q  98 tttcttctgcagttaactgccgaggagca 126  Q
    |||||||||||||||||||||||||||||    
T  39951204 tttcttctgcagttaactgccgaggagca 39951232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 12344 - 12429
Alignment:
Q  1 taatggatgagag-agcttctgccagatttgttgtagaaaattatcggcagttaactaccgaagttttcatcagcagttaactgca 85  Q
    ||||||||||||| || ||||||||||||||| | |||| ||  |||||||||||||||||| ||||||||| |||||||||||||    
T  12344 taatggatgagagtagattctgccagatttgtagcagaagatcctcggcagttaactaccgaggttttcatcggcagttaactgca 12429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 51 - 182
Target Start/End: Complemental strand, 3951 - 3820
Alignment:
Q  51 ttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgaggagcaaaaacatattttatttgtgtgccg 150  Q
    ||||||||||| |||||| || ||||||||||||| |||||| || | ||| ||  |||||||||||||||| |  |||| |||||||| |||||||||     
T  3951 ttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcctcgacagttaactgccgaggggacaaaaaatattttacttgtgtgcct 3852  T
Q  151 cagtcttatgcaatgtgtcaaaaacaattctc 182  Q
    ||  ||||| |||| |||||| | ||||||||    
T  3851 caaccttatccaatttgtcaacatcaattctc 3820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 22476 - 22398
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgagg 122  Q
    ||||||||||||||||||  ||||| |||||||||||||||| |||| | | || ||| || |||||||||||||||||    
T  22476 tcggcagttaactaccgagattttcctcagcagttaactgcagccgaatttcaaattcctcggcagttaactgccgagg 22398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 182
Target Start/End: Original strand, 434 - 573
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccg-attattaatttcttctgcagttaactgccga-ggagcaaaaacatattttatt 141  Q
    |||| |||||||| |||| |||||| ||  |||||||||||| ||| |||||||||| |||| ||||||||||||||| ||||||||| | ||||||| |    
T  434 tcggtagttaactcccgaggttttcctcgacagttaactgcagccggattattaatt-cttcggcagttaactgccgagggagcaaaatcgtattttact 532  T
Q  142 tgtgtgccgcagtcttatgcaatgtgtcaaaaacaattctc 182  Q
     ||||  | |||||||||  ||||||| || | ||||||||    
T  533 cgtgtttctcagtcttatcaaatgtgtaaacatcaattctc 573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 124
Target Start/End: Complemental strand, 8270 - 8192
Alignment:
Q  46 ggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgaggag 124  Q
    |||||||||||||||| |||||| |||||||||||||||| |||  | | || ||| |  |||||||||||||||||||    
T  8270 ggcagttaactaccgaggttttcttcagcagttaactgcatccggatttcaaattccttggcagttaactgccgaggag 8192  T

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Target: scaffold0192 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 18856 - 18916
Alignment:
Q  1 taatggatgagagagcttctgccagatttgttgtagaaaattatcggcagttaactaccga 61  Q
    |||||||||||| |||||||||||||||||| | |||| ||  ||| ||||||||||||||    
T  18856 taatggatgagaaagcttctgccagatttgtagcagaagatcctcgacagttaactaccga 18916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 1181 - 1307
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgaggag-caaaaacatattttattt 142  Q
    ||||||||||||| |||| |||||| || |||||||| |||  ||| || | || ||| || ||||||||||||||||| | ||||||| ||  ||| |     
T  1181 tcggcagttaacttccgaggttttcctcggcagttaattgctgccggtt-tcaaattcctcggcagttaactgccgaggggacaaaaacgtaaattactc 1279  T
Q  143 gtgtgccgcagtcttatgcaatgtgtca 170  Q
    ||||||| ||| ||||||||||||||||    
T  1280 gtgtgcctcagccttatgcaatgtgtca 1307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0794 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 5344 - 5267
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgagg 122  Q
    |||||||||||||||||| |||||| || | ||||||||||| ||| || | || |||||| |||||||| ||||||||    
T  5344 tcggcagttaactaccgaggttttcctcggtagttaactgcagccggtt-tcaaattcttcggcagttaattgccgagg 5267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 904 - 826
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgagg 122  Q
    |||||||||||||||||| |||||| || |||||||||| || |||| | | || ||| |  |||||||||||||||||    
T  904 tcggcagttaactaccgaggttttcctcggcagttaactacagccgaatttcaaattcctaggcagttaactgccgagg 826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 5404 - 5364
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  5404 tcggcagttaactaccgaggttttcctcggcagttaactgc 5364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 122
Target Start/End: Original strand, 17351 - 17429
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgattattaatttcttctgcagttaactgccgagg 122  Q
    |||||||||||||||||| | |||| || ||||||||||||| |||  | | || ||| || |||||||||||||||||    
T  17351 tcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagg 17429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 236234 - 236272
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaact 82  Q
    ||||||||||||||||||||||||| || ||||||||||    
T  236234 tcggcagttaactaccgaagttttcctctgcagttaact 236272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 423 - 463
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  423 tcggcagttaactaccgaggttttcctcggcagttaactgc 463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 65391 - 65343
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgatt 92  Q
    ||||||||||||| ||||||||||| ||  |||||||||||| ||||||    
T  65391 tcggcagttaactgccgaagttttcctcgacagttaactgcagccgatt 65343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 50120 - 50080
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgc 84  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  50120 tcggcagttaactaccgaggttttcctcggcagttaactgc 50080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 127574 - 127526
Alignment:
Q  44 tcggcagttaactaccgaagttttcatcagcagttaactgcacccgatt 92  Q
    ||||||||||||| ||||||||||| || |||||||||| || ||||||    
T  127574 tcggcagttaactgccgaagttttcctctgcagttaactacaaccgatt 127526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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