View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13260_low_32 (Length: 241)
Name: NF13260_low_32
Description: NF13260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13260_low_32 |
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Alignment Details
Target: chr5 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 7175871 - 7175634
Alignment:
| Q |
1 |
aaaaatggatgatggaaatattctgagttggattcggagaataaagattgcattagatgtggcaataggagttgaatatcttcatagtttcacttctcct |
100 |
Q |
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| T |
7175871 |
aaaaatggatgatggaaatattctgagttggattcggagaataaagattgcattagatgtggcaataggagttgaatatcttcatagtttcacttctcct |
7175772 |
T |
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| Q |
101 |
tcacatattcataaggatctaaagtgtagtaacatacttcttgatagtgattttaaagcaaaggttgcaaatttaaggcatttaaggtgtgtggaaggag |
200 |
Q |
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| T |
7175771 |
ccacatattcataaggatctaaagtgtagtaacatacttcttgatagtgattttaaagcaaaggttgcaaatttaaggcatgtaaggtgtgtggaagaag |
7175672 |
T |
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| Q |
201 |
ttgaaaatgatgaagaatttgttgctacaagacatatt |
238 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
7175671 |
ttgaaaatgatgaagaatttgttgctacaagacatatt |
7175634 |
T |
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