View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13261_high_29 (Length: 202)

Name: NF13261_high_29
Description: NF13261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13261_high_29
NF13261_high_29
[»] chr5 (25 HSPs)
chr5 (81-186)||(3603179-3603284)
chr5 (80-185)||(1398540-1398645)
chr5 (81-194)||(20192290-20192403)
chr5 (80-194)||(34682193-34682307)
chr5 (80-194)||(18538358-18538472)
chr5 (80-188)||(19228675-19228783)
chr5 (81-188)||(18310050-18310157)
chr5 (81-194)||(20200171-20200284)
chr5 (81-188)||(3600273-3600381)
chr5 (80-188)||(24053116-24053224)
chr5 (131-194)||(8702221-8702284)
chr5 (88-154)||(35567090-35567156)
chr5 (84-127)||(1401435-1401478)
chr5 (82-164)||(512793-512875)
chr5 (81-155)||(42537138-42537212)
chr5 (89-202)||(42865793-42865906)
chr5 (80-128)||(24049973-24050021)
chr5 (80-188)||(33993216-33993324)
chr5 (83-194)||(33995171-33995282)
chr5 (81-164)||(39743201-39743284)
chr5 (91-194)||(41201675-41201778)
chr5 (81-188)||(41799796-41799903)
chr5 (88-194)||(38968039-38968145)
chr5 (80-194)||(25499910-25500026)
chr5 (80-188)||(1397379-1397487)
[»] chr2 (24 HSPs)
chr2 (1-79)||(19472589-19472667)
chr2 (80-194)||(2917619-2917733)
chr2 (89-191)||(35490625-35490727)
chr2 (80-194)||(45475376-45475490)
chr2 (81-194)||(41181374-41181487)
chr2 (79-194)||(19186682-19186797)
chr2 (84-194)||(43950265-43950374)
chr2 (81-194)||(28342460-28342573)
chr2 (81-194)||(35493364-35493477)
chr2 (81-151)||(16580482-16580552)
chr2 (74-155)||(19187285-19187366)
chr2 (89-184)||(24512112-24512207)
chr2 (80-155)||(45479856-45479931)
chr2 (80-194)||(34921782-34921895)
chr2 (80-194)||(23409524-23409638)
chr2 (94-156)||(43493318-43493380)
chr2 (89-194)||(41497417-41497522)
chr2 (80-188)||(19469921-19470028)
chr2 (81-188)||(41500263-41500370)
chr2 (121-194)||(1101075-1101148)
chr2 (81-194)||(9660078-9660191)
chr2 (87-188)||(12905492-12905593)
chr2 (81-194)||(25184853-25184965)
chr2 (173-202)||(28472142-28472171)
[»] chr4 (25 HSPs)
chr4 (80-194)||(29700325-29700439)
chr4 (80-188)||(4768614-4768722)
chr4 (80-202)||(34154417-34154539)
chr4 (80-194)||(958617-958730)
chr4 (80-194)||(21472507-21472621)
chr4 (85-194)||(49572923-49573032)
chr4 (80-194)||(37959743-37959857)
chr4 (81-187)||(38464796-38464901)
chr4 (81-194)||(4979940-4980053)
chr4 (80-188)||(955728-955836)
chr4 (80-136)||(49422079-49422135)
chr4 (80-184)||(51426473-51426577)
chr4 (80-137)||(18581375-18581432)
chr4 (81-202)||(56304814-56304934)
chr4 (146-202)||(6283456-6283512)
chr4 (80-136)||(44558636-44558692)
chr4 (80-112)||(44561435-44561467)
chr4 (80-127)||(48256653-48256700)
chr4 (80-127)||(51644564-51644611)
chr4 (80-150)||(4774645-4774714)
chr4 (121-194)||(1044542-1044615)
chr4 (145-186)||(9472859-9472900)
chr4 (81-194)||(11494481-11494593)
chr4 (80-128)||(3450103-3450151)
chr4 (80-116)||(24417516-24417552)
[»] chr3 (31 HSPs)
chr3 (80-194)||(29929362-29929476)
chr3 (80-194)||(29978516-29978630)
chr3 (80-194)||(28611123-28611237)
chr3 (81-194)||(41579747-41579860)
chr3 (81-187)||(7247890-7247996)
chr3 (80-193)||(45101872-45101985)
chr3 (80-188)||(43571714-43571822)
chr3 (81-200)||(19454342-19454461)
chr3 (80-194)||(29918364-29918478)
chr3 (80-194)||(29967517-29967631)
chr3 (87-188)||(42804398-42804499)
chr3 (81-184)||(55267378-55267481)
chr3 (84-186)||(66841-66942)
chr3 (89-187)||(13896906-13897004)
chr3 (80-194)||(30256026-30256140)
chr3 (81-187)||(41577012-41577118)
chr3 (80-154)||(42807663-42807737)
chr3 (81-194)||(46344874-46344987)
chr3 (81-188)||(55207692-55207799)
chr3 (80-194)||(19440192-19440306)
chr3 (85-194)||(41802939-41803048)
chr3 (81-186)||(52570597-52570701)
chr3 (81-187)||(2432973-2433079)
chr3 (81-151)||(7837529-7837599)
chr3 (81-195)||(11380378-11380492)
chr3 (81-194)||(41805698-41805811)
chr3 (81-194)||(48250892-48251005)
chr3 (82-194)||(42756097-42756209)
chr3 (81-194)||(41137655-41137768)
chr3 (80-112)||(43568862-43568894)
chr3 (86-158)||(48246354-48246426)
[»] chr1 (29 HSPs)
chr1 (80-186)||(19053995-19054101)
chr1 (80-194)||(46973140-46973254)
chr1 (80-194)||(13173772-13173885)
chr1 (81-194)||(11183123-11183236)
chr1 (80-194)||(41804056-41804170)
chr1 (80-193)||(36908514-36908627)
chr1 (81-194)||(46141719-46141832)
chr1 (81-194)||(13972001-13972112)
chr1 (80-194)||(13178155-13178267)
chr1 (80-202)||(35527028-35527150)
chr1 (81-194)||(18975143-18975256)
chr1 (81-194)||(23276131-23276244)
chr1 (80-194)||(26633466-26633577)
chr1 (80-184)||(35521550-35521654)
chr1 (80-194)||(19499135-19499247)
chr1 (80-183)||(21944414-21944517)
chr1 (81-186)||(6437570-6437675)
chr1 (80-147)||(1656155-1656221)
chr1 (81-188)||(49927542-49927649)
chr1 (80-194)||(36076581-36076694)
chr1 (80-193)||(49857873-49857984)
chr1 (81-194)||(49924793-49924906)
chr1 (80-135)||(7965977-7966032)
chr1 (93-188)||(27485008-27485103)
chr1 (80-127)||(36072306-36072353)
chr1 (82-148)||(36911737-36911803)
chr1 (80-154)||(42570078-42570152)
chr1 (81-134)||(35181334-35181387)
chr1 (92-185)||(35258904-35258997)
[»] chr8 (18 HSPs)
chr8 (80-194)||(7168024-7168138)
chr8 (81-188)||(18441470-18441577)
chr8 (81-194)||(18438571-18438684)
chr8 (81-194)||(41858144-41858257)
chr8 (80-202)||(3395828-3395950)
chr8 (82-194)||(41855306-41855418)
chr8 (80-187)||(22577601-22577708)
chr8 (84-194)||(42602400-42602510)
chr8 (81-194)||(38872953-38873066)
chr8 (81-194)||(35389445-35389558)
chr8 (113-194)||(35940408-35940489)
chr8 (81-153)||(5300684-5300756)
chr8 (81-194)||(39751011-39751123)
chr8 (81-142)||(40077325-40077386)
chr8 (80-108)||(51341-51369)
chr8 (80-116)||(4866371-4866407)
chr8 (96-188)||(18205738-18205830)
chr8 (88-164)||(43690086-43690162)
[»] chr7 (30 HSPs)
chr7 (80-194)||(9494829-9494943)
chr7 (83-181)||(48316296-48316394)
chr7 (81-186)||(48314611-48314715)
chr7 (81-188)||(21185556-21185663)
chr7 (81-194)||(36392062-36392175)
chr7 (80-186)||(10225874-10225981)
chr7 (81-188)||(28980202-28980309)
chr7 (81-188)||(46863373-46863480)
chr7 (81-194)||(30355262-30355375)
chr7 (81-188)||(45361586-45361693)
chr7 (81-171)||(48269618-48269707)
chr7 (81-194)||(27453617-27453730)
chr7 (81-194)||(41047715-41047827)
chr7 (81-188)||(37340239-37340346)
chr7 (86-156)||(10708331-10708401)
chr7 (144-202)||(21188415-21188473)
chr7 (80-154)||(28112778-28112852)
chr7 (81-187)||(34622436-34622542)
chr7 (81-194)||(41049212-41049324)
chr7 (81-194)||(47060864-47060976)
chr7 (93-194)||(47776281-47776382)
chr7 (80-188)||(10705184-10705292)
chr7 (80-127)||(47673018-47673065)
chr7 (80-194)||(36186496-36186609)
chr7 (81-155)||(40590553-40590627)
chr7 (81-194)||(42681931-42682044)
chr7 (90-186)||(46860457-46860553)
chr7 (81-164)||(19044231-19044314)
chr7 (81-164)||(20710322-20710405)
chr7 (88-154)||(42684226-42684292)
[»] scaffold0388 (1 HSPs)
scaffold0388 (80-192)||(11735-11847)
[»] chr6 (14 HSPs)
chr6 (80-192)||(13479662-13479774)
chr6 (81-194)||(35021286-35021399)
chr6 (80-194)||(23958826-23958940)
chr6 (100-183)||(12783991-12784074)
chr6 (87-153)||(26701795-26701861)
chr6 (99-188)||(23986010-23986099)
chr6 (81-188)||(13404661-13404768)
chr6 (80-127)||(32026041-32026088)
chr6 (89-194)||(2050974-2051078)
chr6 (81-194)||(13401423-13401536)
chr6 (81-194)||(25141102-25141215)
chr6 (80-188)||(18001150-18001257)
chr6 (81-154)||(6320552-6320625)
chr6 (81-194)||(29286166-29286279)
[»] scaffold0360 (1 HSPs)
scaffold0360 (88-188)||(7333-7433)
[»] scaffold0618 (1 HSPs)
scaffold0618 (81-194)||(3823-3935)
[»] scaffold1379 (1 HSPs)
scaffold1379 (81-187)||(464-570)
[»] scaffold0147 (1 HSPs)
scaffold0147 (80-128)||(884-932)


Alignment Details
Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 81 - 186
Target Start/End: Complemental strand, 3603284 - 3603179
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||||||||| |||||||||||| ||||||| |||||||  |||||||||||||||||||||||||| || |||||||||||||||||||||    
T  3603284 aattgttgttgacacattgcataaggctgaggcacataagtaaaatacgtttttgctccctcgacagttaactgccgaagaattcaataactggctgcag 3603185  T
Q  181 ttaact 186  Q
    ||||||    
T  3603184 ttaact 3603179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 80 - 185
Target Start/End: Original strand, 1398540 - 1398645
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    ||||||||||||||||||| ||||||| ||||||||| || ||||||| | ||||||||| ||||||||||||||| || |||||||||||| || ||||    
T  1398540 aaattgttgttgacacattacataaggttgagacacagaagtaaaatacacttttgctccttcgacagttaactgccgaggaattcaataaccggttgca 1398639  T
Q  180 gttaac 185  Q
    ||||||    
T  1398640 gttaac 1398645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 81 - 194
Target Start/End: Original strand, 20192290 - 20192403
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    ||||||||||||||||||||||||||||||| |||| || |||||||   |||||| || ||| |||||||||||||| |||||||||||  ||||||||    
T  20192290 aattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgattttgccccttcgtcagttaactgctgaagaattcaataatcggctgcag 20192389  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  20192390 ttaactgccgagga 20192403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 80 - 194
Target Start/End: Original strand, 34682193 - 34682307
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    ||||||||||||||||||||||||||||||||   || || |||||||   ||||||||||| ||||||||||||  || |||||||| ||| |||||||    
T  34682193 aaattgttgttgacacatttcataaggctgaggttcacaagtaaaatacgcttttgctcccttgacagttaactgtcgaggaattcaaaaaccggctgca 34682292  T
Q  180 gttaactgctgagga 194  Q
    ||||||||| |||||    
T  34682293 gttaactgccgagga 34682307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 18538472 - 18538358
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    ||||||||||||||||||||||| |||||||| |||| || |||||||   |||||| |||||| ||||||| ||  || |||||||| ||| |||||||    
T  18538472 aaattgttgttgacacatttcattaggctgaggcacacaagtaaaatacgattttgccccctcggcagttaattgtcgaggaattcaaaaaccggctgca 18538373  T
Q  180 gttaactgctgagga 194  Q
    ||||||||| |||||    
T  18538372 gttaactgccgagga 18538358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 19228783 - 19228675
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||||||||||||||||| |||||||||||||||| || |||||||  |   ||| |||||| ||||||||||| |||||||| || ||| || ||||    
T  19228783 aaattgttgttgacacatttgataaggctgagacacacaagtaaaatacgtaaatgccccctcggcagttaactgccgatgaattaaaaaaccggatgca 19228684  T
Q  180 gttaactgc 188  Q
    |||||||||    
T  19228683 gttaactgc 19228675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 18310157 - 18310050
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||||||||| |||||||||||| |||| || |||||||  |||||||  ||||  ||||||||||  || |||||||||||| | ||||||    
T  18310157 aattgttgttgacacattgcataaggctgaggcacacaagtaaaatacgtttttgcctcctcagcagttaactgtcgaggaattcaataaccgactgcag 18310058  T
Q  181 ttaactgc 188  Q
    ||||||||    
T  18310057 ttaactgc 18310050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 194
Target Start/End: Complemental strand, 20200284 - 20200171
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||||||||| |||||||||||| |||| ||||||||||  ||||||| || ||| ||||||||||   |  |||||||||||   ||||||    
T  20200284 aattgttgttgacacattgcataaggctgaggcacacaaataaaatacgtttttgccccatcggcagttaactgtcaagaaattcaataaccaactgcag 20200185  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  20200184 ttaactgccgagga 20200171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 3600273 - 3600381
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaatt-caataactggctgca 179  Q
    |||||||||||||||||||||||| | |||| |||| || |||||||| ||||||| |||||| ||||||||||| ||  ||||  ||||||  ||||||    
T  3600273 aattgttgttgacacatttcataaagttgagccacacaagtaaaatatgtttttgccccctcggcagttaactgccgaataattataataaccagctgca 3600372  T
Q  180 gttaactgc 188  Q
    |||||||||    
T  3600373 gttaactgc 3600381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 24053116 - 24053224
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||||||||||||||| | ||||||  |||||||||||||||||||  |||||| || |||| ||||||| ||| ||  ||||||| ||| | |||||    
T  24053116 aaattgttgttgacacatatgataaggtcgagacacataaataaaatacgtttttgttctctcggcagttaaatgccgagtaattcaaaaaccgtctgca 24053215  T
Q  180 gttaactgc 188  Q
    |||||||||    
T  24053216 gttaactgc 24053224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 8702284 - 8702221
Alignment:
Q  131 ttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgctgagga 194  Q
    ||||||||||||||||||||||||| || ||||| || | ||| ||||||||||||||||||||    
T  8702284 ttttgctccctcgacagttaactgccgaggaattaaaaatctgactgcagttaactgctgagga 8702221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 35567156 - 35567090
Alignment:
Q  88 gttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactg 154  Q
    ||||||||||||||| |||||||| |||| || |||||||| ||||||||| |||| ||||||||||    
T  35567156 gttgacacatttcatcaggctgaggcacacaagtaaaatatgtttttgctctctcggcagttaactg 35567090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 127
Target Start/End: Complemental strand, 1401478 - 1401435
Alignment:
Q  84 tgttgttgacacatttcataaggctgagacacataaataaaata 127  Q
    ||||||||||||||||||||||||||||||||| || |||||||    
T  1401478 tgttgttgacacatttcataaggctgagacacacaagtaaaata 1401435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 512875 - 512793
Alignment:
Q  82 attgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaatt 164  Q
    |||||||||||||||||| |||||| ||| | ||| || |||| ||  |||||||  ||||||||||||||||| ||||||||    
T  512875 attgttgttgacacatttgataaggttgataaacacaagtaaagtacgtttttgcctcctcgacagttaactgccgatgaatt 512793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 155
Target Start/End: Original strand, 42537138 - 42537212
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgc 155  Q
    |||||||||| |||||||| |||||||||||| |||  | ||||||| |||||||| || ||| |||||||||||    
T  42537138 aattgttgttcacacatttgataaggctgagaaacacgagtaaaatacatttttgccccatcggcagttaactgc 42537212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 42865906 - 42865793
Alignment:
Q  89 ttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgc 188  Q
    ||||||||||||||| |||| | | |||  | |||||||  ||||| |||||||| |||||||| |  || |||||||| ||| || ||||||||| |||    
T  42865906 ttgacacatttcatatggcttaaaaacacgagtaaaataagttttttctccctcggcagttaaccgacgaagaattcaaaaaccggttgcagttaattgc 42865807  T
Q  189 tgaggatcttctgc 202  Q
     |||||||||||||    
T  42865806 cgaggatcttctgc 42865793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 24049973 - 24050021
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatat 128  Q
    |||||||||||||||||| | ||||||  ||||||||||||||||||||    
T  24049973 aaattgttgttgacacatatgataaggtcgagacacataaataaaatat 24050021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 33993216 - 33993324
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||| | |||||||||||||||||| ||||| | |  | |||||||  ||||||| ||||||  |||||||||| ||  ||||||| ||| ||||| |    
T  33993216 aaattgcttttgacacatttcataaggttgagaaatacgagtaaaatacgtttttgccccctcggaagttaactgccgaaaaattcaaaaaccggctgta 33993315  T
Q  180 gttaactgc 188  Q
    |||||||||    
T  33993316 gttaactgc 33993324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 33995282 - 33995171
Alignment:
Q  83 ttgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagtt 182  Q
    |||||||||||| |||| |||||| |||| |||| || ||||||| | ||||   |||||||||||||||||| ||  ||||||| ||  || |||| ||    
T  33995282 ttgttgttgacatattttataaggttgaggcacacaagtaaaatacaattttatcccctcgacagttaactgccgagaaattcaaaaatcggatgcaatt 33995183  T
Q  183 aactgctgagga 194  Q
    |||||| |||||    
T  33995182 aactgccgagga 33995171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 81 - 164
Target Start/End: Complemental strand, 39743284 - 39743201
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaatt 164  Q
    ||||||||||  ||||||| ||||||||| | ||||  | ||||||||  |||||| |||||||||||||||||| || |||||    
T  39743284 aattgttgttcccacatttgataaggctgtgccacactagtaaaatatgattttgccccctcgacagttaactgccgaggaatt 39743201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 194
Target Start/End: Original strand, 41201675 - 41201778
Alignment:
Q  91 gacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgctg 190  Q
    |||||||| |||||||||||| ||||  | |||||||   |||||  | ||||||| |||| ||  || |||||||||||| |||||||||||||||| |    
T  41201675 gacacattacataaggctgaggcacacgagtaaaatacgattttgtcctctcgacaattaattgtcgaggaattcaataaccggctgcagttaactgccg 41201774  T
Q  191 agga 194  Q
    ||||    
T  41201775 agga 41201778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 41799903 - 41799796
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    ||||||||||  ||||||| ||||| ||| ||||||  | |||  ||  ||||||| ||||||||||||||||||||| |||||  | | || |||||||    
T  41799903 aattgttgttcccacatttgataagactgtgacacacgagtaatttacttttttgccccctcgacagttaactgctgaggaattagaaatctagctgcag 41799804  T
Q  181 ttaactgc 188  Q
    ||||||||    
T  41799803 ttaactgc 41799796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 194
Target Start/End: Original strand, 38968039 - 38968145
Alignment:
Q  88 gttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactg 187  Q
    ||||| ||||||||||||||||| | |||||| |||||||  |||||| ||| |||  |||||||| | || ||||  || | | |||||||||||||||    
T  38968039 gttgatacatttcataaggctgaaaaacataagtaaaatacgtttttgatccttcggtagttaactaccgaggaataaaaaatccggctgcagttaactg 38968138  T
Q  188 ctgagga 194  Q
    | |||||    
T  38968139 ccgagga 38968145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 25500026 - 25499910
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagac--acataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctg 177  Q
    |||||| |||||||||||| |||||||||||| |  ||| || |||||||   |||||| |||||| |||||||||   || |||||||| ||| || ||    
T  25500026 aaattggtgttgacacattacataaggctgaggcgaacacaagtaaaatacgcttttgccccctcggcagttaactatcgaggaattcaaaaaccggttg 25499927  T
Q  178 cagttaactgctgagga 194  Q
    | ||||||||| |||||    
T  25499926 cggttaactgccgagga 25499910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 1397487 - 1397379
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||||||||  ||||||| |||||| || | ||||  | |||  || |||||||| |||||| |||||||||||||| |||||  | | | |||||||    
T  1397487 aaattgttgttcccacatttgataaggttgtggcacacgagtaatttacatttttgccccctcggcagttaactgctgaggaattagaaatccggctgca 1397388  T
Q  180 gttaactgc 188  Q
    |||||||||    
T  1397387 gttaactgc 1397379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 2e-32; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 19472667 - 19472589
Alignment:
Q  1 ctaatttgcctcttttaccagttttcatcgtcattttaccgtaaggtacagtaaggtcttcaatttactgaattgaaac 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  19472667 ctaatttgcctcttttaccagttttcatcgtcattttaccgtaaggtacaataaagtcttcaatttactgaattgaaac 19472589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 80 - 194
Target Start/End: Original strand, 2917619 - 2917733
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||||||||||||||||||||||||||||| |||| || |||||||  ||||||| |||||| ||||||||||| ||  |||| || ||| |||| ||    
T  2917619 aaattgttgttgacacatttcataaggctgaggcacaaaagtaaaatacgtttttgccccctcggcagttaactgccgagaaattgaaaaaccggctaca 2917718  T
Q  180 gttaactgctgagga 194  Q
    ||||||||| |||||    
T  2917719 gttaactgccgagga 2917733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 89 - 191
Target Start/End: Original strand, 35490625 - 35490727
Alignment:
Q  89 ttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgc 188  Q
    |||||||||| |||||||||||||||||  | ||||||| ||||||||  ||||||| ||||||||| || |||||||| ||| ||||||||||||||||    
T  35490625 ttgacacattgcataaggctgagacacacgagtaaaatacatttttgcctcctcgacggttaactgccgaagaattcaaaaaccggctgcagttaactgc 35490724  T
Q  189 tga 191  Q
    |||    
T  35490725 tga 35490727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 80 - 194
Target Start/End: Original strand, 45475376 - 45475490
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||| |||||||||||||||||||||||||||||| || |||||||   |||||| |||||| ||||||||||| ||  ||||||| ||| |||| ||    
T  45475376 aaattgatgttgacacatttcataaggctgagacacacaagtaaaatacgattttgccccctcggcagttaactgccgagaaattcaaaaaccggctaca 45475475  T
Q  180 gttaactgctgagga 194  Q
    ||||||||| |||||    
T  45475476 gttaactgccgagga 45475490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 81 - 194
Target Start/End: Original strand, 41181374 - 41181487
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    ||||| |||||||||||| |||||||||||| ||||  | |||||||  ||||||| |||||| ||||||||||| || |||||||||||| |||| ||     
T  41181374 aattgatgttgacacattgcataaggctgaggcacacgagtaaaatacgtttttgccccctcggcagttaactgccgaggaattcaataaccggctacat 41181473  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  41181474 ttaactgccgagga 41181487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 79 - 194
Target Start/End: Original strand, 19186682 - 19186797
Alignment:
Q  79 caaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgc 178  Q
    ||||||||||||||||||| |||||||||||||||||| || |||||||  ||||| | || ||| |||| |||||| ||  ||||||| ||  ||||||    
T  19186682 caaattgttgttgacacatatcataaggctgagacacacaagtaaaatacgtttttaccccatcggcagtaaactgccgagcaattcaaaaagcggctgc 19186781  T
Q  179 agttaactgctgagga 194  Q
    ||||||||||| ||||    
T  19186782 agttaactgctaagga 19186797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 43950374 - 43950265
Alignment:
Q  84 tgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagtta 183  Q
    |||||||||||||||| |||||||||||| |||  | ||||||| |||||||| |||||| |||||||||||||  |||||||| ||| | ||||| |||    
T  43950374 tgttgttgacacatttgataaggctgagaaacacgagtaaaatacatttttgccccctcggcagttaactgctgtggaattcaa-aaccgactgcaatta 43950276  T
Q  184 actgctgagga 194  Q
    ||||| |||||    
T  43950275 actgccgagga 43950265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 194
Target Start/End: Original strand, 28342460 - 28342573
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||||||||| ||||||||| |||||||||| |||  ||  ||||||| || ||| ||||||||||  || |||||||| ||| |||||||     
T  28342460 aattgttgttgacacattgcataaggctaagacacataagtaatttacgtttttgccccttcggcagttaactgtcgaagaattcaaaaaccggctgcaa 28342559  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  28342560 ttaactgccgagga 28342573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 194
Target Start/End: Complemental strand, 35493477 - 35493364
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||||||||| ||||||| |||||||||  | |||||||   |||||| ||||||  |||||||||| || |||||||| |||  |||||||    
T  35493477 aattgttgttgacacattgcataaggttgagacacacgagtaaaatacgcttttgccccctcggtagttaactgccgaggaattcaaaaaccagctgcag 35493378  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  35493377 ttaactgccgagga 35493364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 16580482 - 16580552
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaa 151  Q
    |||||||||||||||||| |||||||||||||||||  | ||||||| ||||||||  |||||||||||||    
T  16580482 aattgttgttgacacattgcataaggctgagacacacgagtaaaatacatttttgcctcctcgacagttaa 16580552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 19187366 - 19187285
Alignment:
Q  74 tgaaacaaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgc 155  Q
    ||||| ||||||||||| | |||| |||||||||||||||||| || |||||||  ||||||| |||||| |||||||||||    
T  19187366 tgaaaaaaattgttgttcagacatatcataaggctgagacacacaagtaaaatacgtttttgccccctcggcagttaactgc 19187285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 89 - 184
Target Start/End: Original strand, 24512112 - 24512207
Alignment:
Q  89 ttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaa 184  Q
    ||||||||||||||| |||||||| ||| || |||||||  ||||| | ||||||||||||||||| ||| ||||| || |||  |||||||||||    
T  24512112 ttgacacatttcatatggctgagaaacacaagtaaaatacgtttttaccccctcgacagttaactgttgaggaattaaaaaaccagctgcagttaa 24512207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 80 - 155
Target Start/End: Complemental strand, 45479931 - 45479856
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgc 155  Q
    ||||||||||||||||||||||||||||| ||| |||| | |||||||   |||||||| |||| |||||||||||    
T  45479931 aaattgttgttgacacatttcataaggctcagaaacatgagtaaaatacgattttgctctctcggcagttaactgc 45479856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 34921895 - 34921782
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||| | ||||||||||||||||||| |||| |||  | |||||||  ||||||| ||| ||  |||||||||| ||  ||||||| ||| |||||||    
T  34921895 aaattgctattgacacatttcataaggcagagaaacacgagtaaaatacgtttttgccccc-cggtagttaactgccgagaaattcaaaaaccggctgca 34921797  T
Q  180 gttaactgctgagga 194  Q
    |||||||||||||||    
T  34921796 gttaactgctgagga 34921782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 23409638 - 23409524
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||||||| ||||| || |||||||||||  ||||  | |||||||    ||||| | |||| ||||||| ||| || |||||||| |||||||||||    
T  23409638 aaattgttgtggacacgttacataaggctgatgcacactagtaaaatacgcgtttgccctctcggcagttaattgccgaggaattcaaaaactggctgca 23409539  T
Q  180 gttaactgctgagga 194  Q
    ||||||||| |||||    
T  23409538 gttaactgccgagga 23409524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 43493380 - 43493318
Alignment:
Q  94 acatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgct 156  Q
    ||||| ||||||||||||||||| || |||||||  ||||||| |||||| ||||||||||||    
T  43493380 acattacataaggctgagacacacaagtaaaatacgtttttgccccctcggcagttaactgct 43493318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 194
Target Start/End: Original strand, 41497417 - 41497522
Alignment:
Q  89 ttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgc 188  Q
    |||||||||| |||||||||||| ||||  | |||  ||  |||||||  |||||||| |||||||| || |||||||| ||| |||||||||||| |||    
T  41497417 ttgacacattgcataaggctgaggcacacgagtaatttacgtttttgccacctcgacacttaactgccgaagaattcaaaaaccggctgcagttaattgc 41497516  T
Q  189 tgagga 194  Q
     |||||    
T  41497517 cgagga 41497522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 19469921 - 19470028
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||||| |||| |||||| |||||| ||| ||||| || |||||||  |||||  ||| || ||||||||||  ||| |||||||||||| || ||||    
T  19469921 aaattgttcttgatacattttataaggttgacacacacaagtaaaatacgttttttttccttc-acagttaactattgaggaattcaataaccggttgca 19470019  T
Q  180 gttaactgc 188  Q
    |||||||||    
T  19470020 gttaactgc 19470028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 41500370 - 41500263
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    ||||| ||||||||||||||||| |||||||| |||  | |||||||   |||||| |||||| |||||||||    | |||||||| | | ||||||||    
T  41500370 aattgatgttgacacatttcatatggctgagaaacacgagtaaaatacgcttttgccccctcggcagttaactatcaaagaattcaaaatccggctgcag 41500271  T
Q  181 ttaactgc 188  Q
    ||||||||    
T  41500270 ttaactgc 41500263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 194
Target Start/End: Complemental strand, 1101148 - 1101075
Alignment:
Q  121 taaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgctgagga 194  Q
    ||||||||  ||||||||||||| ||||||||||| ||||||||  | | | ||||| |||||||||| |||||    
T  1101148 taaaatatgattttgctccctcggcagttaactgccgatgaatttgaaatccggctgtagttaactgccgagga 1101075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 194
Target Start/End: Complemental strand, 9660191 - 9660078
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    ||||| |||||||||||| ||||| ||||||  |||  | |||  ||  ||||||| | |||| ||||||||||| || |||| ||||||| ||||||||    
T  9660191 aattgctgttgacacattgcataaagctgaggtacacgagtaatttacttttttgccctctcggcagttaactgccgaggaatacaataaccggctgcag 9660092  T
Q  181 ttaactgctgagga 194  Q
    || ||||| |||||    
T  9660091 ttgactgccgagga 9660078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 12905492 - 12905593
Alignment:
Q  87 tgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaact 186  Q
    |||||||||||||||||||||||||| |||  | |||||||   ||||   |||||| ||||||||||| ||  |||| || ||  ||||||||||||||    
T  12905492 tgttgacacatttcataaggctgagaaacaagagtaaaatacgcttttttcccctcggcagttaactgccgagaaattgaaaaatcggctgcagttaact 12905591  T
Q  187 gc 188  Q
    ||    
T  12905592 gc 12905593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 194
Target Start/End: Complemental strand, 25184965 - 25184853
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||||| ||| ||||||| |||| ||||  | |||||||  ||||||| |||||  ||||||||||  || |||||  | ||| ||||||||    
T  25184965 aattgttgttgacagattgcataaggttgaggcacacgagtaaaatacgtttttgccccctcagcagttaactgtcgaggaatttga-aaccggctgcag 25184867  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  25184866 ttaactgccgagga 25184853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 173 - 202
Target Start/End: Original strand, 28472142 - 28472171
Alignment:
Q  173 ggctgcagttaactgctgaggatcttctgc 202  Q
    ||||||||||||||||||||||||||||||    
T  28472142 ggctgcagttaactgctgaggatcttctgc 28472171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 6e-30; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 29700439 - 29700325
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||||||||||||||||||||||||||||| |||| || |||||||   |||||   |||||||||||||||||||| |||||||||||| |||||||    
T  29700439 aaattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgcttttgtctcctcgacagttaactgctgaggaattcaataaccggctgca 29700340  T
Q  180 gttaactgctgagga 194  Q
    ||||||||| |||||    
T  29700339 gttaactgccgagga 29700325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 4768614 - 4768722
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||||||||||||||||||||||||||||  |||| || ||||||||| |||||| |||||| ||||||||||| || |||||||| | |||||||||    
T  4768614 aaattgttgttgacacatttcataaggctgatgcacacaagtaaaatataattttgccccctcggcagttaactgccgaggaattcaaaatctggctgca 4768713  T
Q  180 gttaactgc 188  Q
    |||||||||    
T  4768714 gttaactgc 4768722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 80 - 202
Target Start/End: Complemental strand, 34154539 - 34154417
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    ||||||||||||||||||||||||||||||||| |||    ||||||| |||||||  || ||| ||||||||||| || ||||| || ||| |||||||    
T  34154539 aaattgttgttgacacatttcataaggctgagaaacacgggtaaaatacatttttgtcccatcggcagttaactgccgaggaattaaaaaaccggctgca 34154440  T
Q  180 gttaactgctgaggatcttctgc 202  Q
    ||||||||| |||||||||||||    
T  34154439 gttaactgcagaggatcttctgc 34154417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 958730 - 958617
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||| ||||||||||||| ||||||||||| ||||||| |||||||  ||||||  | |||||||||||||||| ||||||||||| ||| || ||||    
T  958730 aaattgatgttgacacattttataaggctgaggcacataagtaaaatacgtttttgtcctctcgacagttaactgc-gatgaattcaaaaaccggttgca 958632  T
Q  180 gttaactgctgagga 194  Q
    ||||||||| |||||    
T  958631 gttaactgccgagga 958617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 21472621 - 21472507
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    ||||||||||||||||||||||||||||||||| |||  | |||||||  |||||||  ||||| ||||||||||| || |||||||| ||  |||||||    
T  21472621 aaattgttgttgacacatttcataaggctgagaaacacgagtaaaatacgtttttgccgcctcggcagttaactgccgaggaattcaaaaatcggctgca 21472522  T
Q  180 gttaactgctgagga 194  Q
    ||||||||| |||||    
T  21472521 gttaactgccgagga 21472507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 85 - 194
Target Start/End: Complemental strand, 49573032 - 49572923
Alignment:
Q  85 gttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaa 184  Q
    |||||||||||||| |||||||||||| |||| || |||||||  ||||||| || ||||||||||||||  || |||||||||||  ||||||||||||    
T  49573032 gttgttgacacattgcataaggctgaggcacacaagtaaaatacgtttttgccccatcgacagttaactgtcgaggaattcaataatcggctgcagttaa 49572933  T
Q  185 ctgctgagga 194  Q
    |||| |||||    
T  49572932 ctgccgagga 49572923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 37959857 - 37959743
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    ||||||||||||||||||| |||||||||||| ||||  | |||||||  ||||| | |||||| |||||||||| ||| ||||| ||||||  ||||||    
T  37959857 aaattgttgttgacacattacataaggctgaggcacacgagtaaaatacgtttttaccccctcggcagttaactgttgaggaatttaataaccagctgca 37959758  T
Q  180 gttaactgctgagga 194  Q
    ||||||||| |||||    
T  37959757 gttaactgccgagga 37959743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 187
Target Start/End: Complemental strand, 38464901 - 38464796
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||||||||||||||||| ||||  |||| | ||||||||  ||||||| ||||||||||||| ||  || |||||| | ||| ||||||||    
T  38464901 aattgttgttgacacatttcataaggttgaggtacatgagtaaaatatgattttgcttcctcgacagttaaatgacgaggaattcga-aaccggctgcag 38464803  T
Q  181 ttaactg 187  Q
    |||||||    
T  38464802 ttaactg 38464796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 194
Target Start/End: Complemental strand, 4980053 - 4979940
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||||||||| ||||||| |||| ||||  | |||  ||  ||||| |||||||| ||||||||||  || || ||||| ||| ||||||||    
T  4980053 aattgttgttgacacattgcataaggttgaggcacacgagtaatttacgtttttcctccctcggcagttaactgtcgacgatttcaaaaaccggctgcag 4979954  T
Q  181 ttaactgctgagga 194  Q
    ||||||||||||||    
T  4979953 ttaactgctgagga 4979940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 955728 - 955836
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||| |||||||||||||||||| | |||| |||| || |||||||  |||||||  | | | |||||||||||||| |||||||| ||  |||||||    
T  955728 aaattgatgttgacacatttcataaagttgaggcacacaagtaaaatacgtttttgcctctttggcagttaactgctgaggaattcaaaaatcggctgca 955827  T
Q  180 gttaactgc 188  Q
    |||||||||    
T  955828 gttaactgc 955836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 49422079 - 49422135
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgc 136  Q
    ||||||||||| |||||||||||||||||||| |||| ||||||||||  |||||||    
T  49422079 aaattgttgtttacacatttcataaggctgagtcacacaaataaaatacgtttttgc 49422135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 80 - 184
Target Start/End: Original strand, 51426473 - 51426577
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||||||||||||| |||||||||||| || |||| || |||||||  ||||||  |  ||||||||||||||  || |||||||| ||  |||||||    
T  51426473 aaattgttgttgacacgtttcataaggcttaggcacacaagtaaaatacgtttttgtcctttcgacagttaactgtcgaggaattcaaaaatcggctgca 51426572  T
Q  180 gttaa 184  Q
    |||||    
T  51426573 gttaa 51426577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 18581432 - 18581375
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgct 137  Q
    ||||||||||||||||||||||||||| |||| |||| || | ||||||| |||||||    
T  18581432 aaattgttgttgacacatttcataaggttgaggcacacaagttaaatataattttgct 18581375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 202
Target Start/End: Original strand, 56304814 - 56304934
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    ||||||||||  ||||||| |||||| ||||| |||  | ||||||| |||||||| || ||| ||||||||||  || ||||| || | ||||||||||    
T  56304814 aattgttgttcccacatttgataaggttgagaaacacgagtaaaatacatttttgc-ccatcggcagttaactgtcgaggaattaaaaatctggctgcag 56304912  T
Q  181 ttaactgctgaggatcttctgc 202  Q
    |||| ||| |||||| ||||||    
T  56304913 ttaattgccgaggattttctgc 56304934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 6283512 - 6283456
Alignment:
Q  146 agttaactgctgatgaattcaataactggctgcagttaactgctgaggatcttctgc 202  Q
    |||||||||| |  |||||||| ||| |||||||||||||||| |||||||||||||    
T  6283512 agttaactgccgcagaattcaaaaaccggctgcagttaactgccgaggatcttctgc 6283456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 44558636 - 44558692
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgc 136  Q
    ||||||||||||||||||| |||||||||||| |||| || ||||||| | ||||||    
T  44558636 aaattgttgttgacacattacataaggctgaggcacacaagtaaaatacacttttgc 44558692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 112
Target Start/End: Complemental strand, 44561467 - 44561435
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgaga 112  Q
    |||||||||||||||||||||||||||||||||    
T  44561467 aaattgttgttgacacatttcataaggctgaga 44561435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 127
Target Start/End: Complemental strand, 48256700 - 48256653
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaata 127  Q
    ||||||||||| |||||||||||||||||||| |||| || |||||||    
T  48256700 aaattgttgttcacacatttcataaggctgaggcacacaagtaaaata 48256653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 127
Target Start/End: Complemental strand, 51644611 - 51644564
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaata 127  Q
    |||||||||||||||||||| || |||||||| ||||||| |||||||    
T  51644611 aaattgttgttgacacattttattaggctgaggcacataagtaaaata 51644564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 4774714 - 4774645
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagtta 150  Q
    ||||||||||||||||||||||||| ||||||| |||| | |||||||  |||||| |||| || ||||||    
T  4774714 aaattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 4774645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 194
Target Start/End: Complemental strand, 1044615 - 1044542
Alignment:
Q  121 taaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgctgagga 194  Q
    ||||||||  ||||||||| ||| ||||||||||  ||||||||  | | |||||||||||||||||| |||||    
T  1044615 taaaatatgattttgctccttcggcagttaactgtcgatgaatttgaaatctggctgcagttaactgccgagga 1044542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 186
Target Start/End: Original strand, 9472859 - 9472900
Alignment:
Q  145 cagttaactgctgatgaattcaataactggctgcagttaact 186  Q
    |||||||||||||| |||||||  ||||||||||||||||||    
T  9472859 cagttaactgctgaggaattcataaactggctgcagttaact 9472900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 194
Target Start/End: Original strand, 11494481 - 11494593
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    ||||||||| ||||||||| | |||| ||||| |||  | |||||||  ||||||  |||||| || |||||||  || |||||||| ||| ||||||||    
T  11494481 aattgttgtcgacacatttgaaaagggtgagaaacacgagtaaaatacgtttttgtcccctcggcaattaactgtcgaggaattcaa-aaccggctgcag 11494579  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  11494580 ttaactgccgagga 11494593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 3450151 - 3450103
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatat 128  Q
    |||||| |||||||| |||||||||||||||| |||| || ||||||||    
T  3450151 aaattgctgttgacatatttcataaggctgaggcacacaagtaaaatat 3450103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 24417552 - 24417516
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacaca 116  Q
    |||||||||||||||||| |||||| |||||||||||    
T  24417552 aaattgttgttgacacatatcataacgctgagacaca 24417516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 6e-30; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 80 - 194
Target Start/End: Original strand, 29929362 - 29929476
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||||||||||||||||| ||||||||||| |||| || ||||||||  |||||||||||||||||||||||| ||| |||||||| ||| |||||||    
T  29929362 aaattgttgttgacacattttataaggctgaggcacacaagtaaaatatgattttgctccctcgacagttaactgttgaggaattcaaaaaccggctgca 29929461  T
Q  180 gttaactgctgagga 194  Q
     |||||||| |||||    
T  29929462 attaactgccgagga 29929476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 80 - 194
Target Start/End: Original strand, 29978516 - 29978630
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||||||||||||||||| ||||||||||| |||| || ||||||||  |||||||||||||||||||||||| ||| |||||||| ||| |||||||    
T  29978516 aaattgttgttgacacattttataaggctgaggcacacaagtaaaatatgattttgctccctcgacagttaactgttgaggaattcaaaaaccggctgca 29978615  T
Q  180 gttaactgctgagga 194  Q
     |||||||| |||||    
T  29978616 attaactgccgagga 29978630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 28611237 - 28611123
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||||| || ||||||||||||||||||||||||| || ||||||||| |||||| |||||| ||||||||||| ||  ||||||| ||| |||||||    
T  28611237 aaattgttctttacacatttcataaggctgagacacacaagtaaaatataattttgccccctcggcagttaactgccgagaaattcaaaaaccggctgca 28611138  T
Q  180 gttaactgctgagga 194  Q
    ||||||||| |||||    
T  28611137 gttaactgccgagga 28611123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 81 - 194
Target Start/End: Complemental strand, 41579860 - 41579747
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    ||||||||||||||| || |||||||||||| ||||||| |||||||   |||| | |||||| ||||||| |||||| |||||||||||| ||||||||    
T  41579860 aattgttgttgacacgttgcataaggctgaggcacataagtaaaatacgatttttccccctcggcagttaattgctgaggaattcaataaccggctgcag 41579761  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  41579760 ttaactgccgagga 41579747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 81 - 187
Target Start/End: Complemental strand, 7247996 - 7247890
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    ||||||||||||||||||  ||||||||||| ||||  |||||||||   |||||| |||||| ||||||||||| || |||||||||||| ||||||||    
T  7247996 aattgttgttgacacattggataaggctgaggcacacgaataaaatacgcttttgccccctcggcagttaactgccgaggaattcaataaccggctgcag 7247897  T
Q  181 ttaactg 187  Q
    |||||||    
T  7247896 ttaactg 7247890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 80 - 193
Target Start/End: Complemental strand, 45101985 - 45101872
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||||||| |||||||||||||||| |||| ||||||| |||||||  |||||   |||||| ||||||| || ||| |||||||| ||| |||||||    
T  45101985 aaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacgtttttatcccctcggcagttaattgttgaggaattcaaaaaccggctgca 45101886  T
Q  180 gttaactgctgagg 193  Q
    ||||||||| ||||    
T  45101885 gttaactgccgagg 45101872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 43571822 - 43571714
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    ||||||||||||||||||| ||||||| | ||  ||| || |||||||| ||||||| |||||| |||||||||||||| |||||||| |   |||||||    
T  43571822 aaattgttgttgacacattacataaggttcaggtacacaagtaaaatatgtttttgccccctcggcagttaactgctgaggaattcaaaagtcggctgca 43571723  T
Q  180 gttaactgc 188  Q
    |||||||||    
T  43571722 gttaactgc 43571714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 200
Target Start/End: Complemental strand, 19454461 - 19454342
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||| ||||| ||||||| |||||||||  | |||||||   |||||| | |||| |||||||||||||| |||||||| ||  || |||||    
T  19454461 aattgttgttgatacattgcataaggttgagacacacgagtaaaatacgcttttgccctctcggcagttaactgctgaggaattcaaaaatcggttgcag 19454362  T
Q  181 ttaactgctgaggatcttct 200  Q
    |||||||| |||||||||||    
T  19454361 ttaactgccgaggatcttct 19454342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 29918478 - 29918364
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    ||||||||||||||| |||||||||||||||| ||||||| |||||||   |||||  |||||| || |||||||| ||  ||||| | ||| |||||||    
T  29918478 aaattgttgttgacatatttcataaggctgaggcacataagtaaaatacgattttggcccctcggcaattaactgccgaataattcgaaaaccggctgca 29918379  T
Q  180 gttaactgctgagga 194  Q
    ||||||||| |||||    
T  29918378 gttaactgccgagga 29918364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 29967631 - 29967517
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    ||||||||||||||| |||||||||||||||| ||||||| |||||||   |||||  |||||| || |||||||| ||  ||||| | ||| |||||||    
T  29967631 aaattgttgttgacatatttcataaggctgaggcacataagtaaaatacgattttggcccctcggcaattaactgccgaataattcgaaaaccggctgca 29967532  T
Q  180 gttaactgctgagga 194  Q
    ||||||||| |||||    
T  29967531 gttaactgccgagga 29967517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 42804398 - 42804499
Alignment:
Q  87 tgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaact 186  Q
    ||||||||||||||||||||||||| |||| || ||||||| | ||| || ||||||| |||||||||| || ||||| || |||| | |||||||||||    
T  42804398 tgttgacacatttcataaggctgaggcacacaagtaaaatacactttagccccctcgatagttaactgccgaggaattaaaaaactagttgcagttaact 42804497  T
Q  187 gc 188  Q
    ||    
T  42804498 gc 42804499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 55267378 - 55267481
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    ||||||||||||||| || |||||||||||||||||  | |||  ||  ||||||| |||||||||||||||||| || |||||||| ||  ||||||||    
T  55267378 aattgttgttgacacgttgcataaggctgagacacacgagtaatttacgtttttgccccctcgacagttaactgccgaagaattcaaaaatcggctgcag 55267477  T
Q  181 ttaa 184  Q
    ||||    
T  55267478 ttaa 55267481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 186
Target Start/End: Original strand, 66841 - 66942
Alignment:
Q  84 tgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagtta 183  Q
    |||||||||||||||| ||||||||||||||||  | |||||||   |||||| |||||| ||||||||||| || | |||||| ||| |||||||||||    
T  66841 tgttgttgacacatttgataaggctgagacacacgagtaaaatacgcttttgccccctcggcagttaactgccgaggtattcaa-aaccggctgcagtta 66939  T
Q  184 act 186  Q
    |||    
T  66940 act 66942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 13897004 - 13896906
Alignment:
Q  89 ttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactg 187  Q
    |||| ||||| ||||||||| |||||||  | |||||||| ||||||   ||||| ||||||| |||||| ||||| ||||||||||||||||||||||    
T  13897004 ttgatacattgcataaggctaagacacacgagtaaaatatgtttttgactcctcggcagttaattgctgaagaatttaataactggctgcagttaactg 13896906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 30256140 - 30256026
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    ||||||||||||||||||||||||| |||||| |||| || ||||||| ||   ||| |||| |  |||||||||| || ||||| || ||| |||||||    
T  30256140 aaattgttgttgacacatttcataaagctgaggcacacaagtaaaatacataaatgcccccttggtagttaactgccgaggaattaaaaaaccggctgca 30256041  T
Q  180 gttaactgctgagga 194  Q
    ||||||||| |||||    
T  30256040 gttaactgccgagga 30256026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 187
Target Start/End: Original strand, 41577012 - 41577118
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||||||||||||||||||||||| | | ||||||||||  |||||||    ||||||||||||||  |||||||| || ||  || |||||    
T  41577012 aattgttgttgacacatttcataaggctgagaaatacaaataaaatacgtttttgccttttcgacagttaactgtcgatgaattaaaaaatcggttgcag 41577111  T
Q  181 ttaactg 187  Q
    |||||||    
T  41577112 ttaactg 41577118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 42807737 - 42807663
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactg 154  Q
    ||||||||||| |||||||||||||||||||  |||| |||||||||| ||||||||  ||||| ||||||||||    
T  42807737 aaattgttgttaacacatttcataaggctgatgcacacaaataaaatacatttttgcctcctcggcagttaactg 42807663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 194
Target Start/End: Original strand, 46344874 - 46344987
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    ||||| |||||||| |||  |||||| |||| |||| || |||||||| ||||||| |||||| ||||||||||  || |||||||| ||  ||||||||    
T  46344874 aattgatgttgacaaattggataaggttgaggcacacaagtaaaatatttttttgccccctcggcagttaactgtcgaggaattcaaaaatcggctgcag 46344973  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  46344974 ttaactgccgagga 46344987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 55207799 - 55207692
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    ||||| ||||||||||||||||| |||||||| |||  | |||||||   |||||| || ||| ||||||||||| || |||||||| ||| || |||||    
T  55207799 aattgatgttgacacatttcatatggctgagaaacacgagtaaaatactcttttgccccatcggcagttaactgccgaagaattcaaaaaccggttgcag 55207700  T
Q  181 ttaactgc 188  Q
    ||||||||    
T  55207699 ttaactgc 55207692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 194
Target Start/End: Original strand, 19440192 - 19440306
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||| |||||| ||||| ||||| |||||| ||||  | ||||||| | ||||||  ||||| ||||||||||| || |||||||  ||| |||||||    
T  19440192 aaattgctgttgatacattgcataaagctgaggcacacgagtaaaataaacttttgcctcctcggcagttaactgccgaagaattcataaaccggctgca 19440291  T
Q  180 gttaactgctgagga 194  Q
    ||||||||| |||||    
T  19440292 gttaactgccgagga 19440306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 194
Target Start/End: Original strand, 41802939 - 41803048
Alignment:
Q  85 gttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaa 184  Q
    ||||| ||||||||||||| |||||||| | |  | |||||||  ||||||| | |||| ||||||||||| || ||||| || ||| ||||||||||||    
T  41802939 gttgtcgacacatttcatatggctgagaaatacgagtaaaatacgtttttgcccactcggcagttaactgccgaagaatttaaaaaccggctgcagttaa 41803038  T
Q  185 ctgctgagga 194  Q
    |||| |||||    
T  41803039 ctgccgagga 41803048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 186
Target Start/End: Complemental strand, 52570701 - 52570597
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||| ||||||||||| |||||||||||| ||||  | |||||||  ||||| | |||||| ||||||||||| || |||||||| ||| | ||||||    
T  52570701 aattgtcgttgacacattgcataaggctgaggcacacgattaaaatacgttttttc-ccctcggcagttaactgccgaagaattcaaaaaccgactgcag 52570603  T
Q  181 ttaact 186  Q
    ||||||    
T  52570602 ttaact 52570597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 187
Target Start/End: Complemental strand, 2433079 - 2432973
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||||||||| |||||||||||| ||||  | |||||||   ||||   |||||| ||||||||||  || |||||||||||| || | |||    
T  2433079 aattgttgttgacacattgcataaggctgaggcacacgagtaaaatacgcttttatcccctcggcagttaactgtcgaggaattcaataaccggatacag 2432980  T
Q  181 ttaactg 187  Q
    |||||||    
T  2432979 ttaactg 2432973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 7837529 - 7837599
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaa 151  Q
    |||||||||||||||||| ||||||||||||||||| || |||  ||  ||||| | ||||||||||||||    
T  7837529 aattgttgttgacacattgcataaggctgagacacacaagtaatttaagttttttccccctcgacagttaa 7837599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 195
Target Start/End: Original strand, 11380378 - 11380492
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||||||||||  | ||||||||| |||  | |||||||  ||||||| || ||| ||||||||||| || ||||| || |  ||| |||||    
T  11380378 aattgttgttgacacatttggttaggctgagaaacacgagtaaaatacgtttttgccccttcggcagttaactgccgaggaattaaaaatatggttgcag 11380477  T
Q  181 ttaactgctgaggat 195  Q
    |||||||| ||||||    
T  11380478 ttaactgccgaggat 11380492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 194
Target Start/End: Complemental strand, 41805811 - 41805698
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||| ||||||||| |||||||||||| |||| || |||  ||  |||||||| ||||| ||||||||||  || ||||| ||  || |||||||     
T  41805811 aattgttgatgacacattgcataaggctgaggcacacaagtaatttacgtttttgcttcctcggcagttaactgtcgaagaatttaaagaccggctgcaa 41805712  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  41805711 ttaactgccgagga 41805698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 194
Target Start/End: Complemental strand, 48251005 - 48250892
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    ||||||||||  |||||| ||||||| || | ||||||||||||  |  ||||||| |||||| |||||||||||||| |||||  |   | ||||||||    
T  48251005 aattgttgttcccacattacataaggttgtgccacataaataaatgacgtttttgccccctcggcagttaactgctgaggaatttgaattccggctgcag 48250906  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  48250905 ttaactgccgagga 48250892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 194
Target Start/End: Original strand, 42756097 - 42756209
Alignment:
Q  82 attgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagt 181  Q
    |||||||||||||||||| |||||| | ||| |||| | |||||||  ||||||| |||||  ||||||||||  || ||||| || | | || ||||||    
T  42756097 attgttgttgacacatttgataaggttcagaaacatgagtaaaatacgtttttgccccctcagcagttaactgtcgaggaattaaaaatccggttgcagt 42756196  T
Q  182 taactgctgagga 194  Q
    ||||||| |||||    
T  42756197 taactgccgagga 42756209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 194
Target Start/End: Original strand, 41137655 - 41137768
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    ||||||||||  ||||||| |||||| || | ||||  | |||||||| |||||||||| ||  ||||||||||| || |||||  | | | ||||||||    
T  41137655 aattgttgttcccacatttgataaggttgtgccacactagtaaaatatgtttttgctccatcagcagttaactgccgaggaatttgaaatccggctgcag 41137754  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  41137755 ttaactgccgagga 41137768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 112
Target Start/End: Original strand, 43568862 - 43568894
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgaga 112  Q
    |||||||||||||||||||| ||||||||||||    
T  43568862 aaattgttgttgacacattttataaggctgaga 43568894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 48246354 - 48246426
Alignment:
Q  86 ttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctga 158  Q
    ||||| |||||||| ||||||||||| || |  | ||||  |||||||||| |||||| ||||||||||||||    
T  48246354 ttgtttacacatttgataaggctgagtcatacgagtaaatgatatttttgccccctcggcagttaactgctga 48246426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 1e-27; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 80 - 186
Target Start/End: Original strand, 19053995 - 19054101
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    ||||||||||||||||||||||||||||||||| |||  | |||||||  ||||||| |||||||||||||||||| || |||||||| ||| |||||||    
T  19053995 aaattgttgttgacacatttcataaggctgagaaacacgagtaaaatacgtttttgccccctcgacagttaactgccgaggaattcaaaaaccggctgca 19054094  T
Q  180 gttaact 186  Q
    |||||||    
T  19054095 gttaact 19054101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 80 - 194
Target Start/End: Original strand, 46973140 - 46973254
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    ||||||||||||||||||||||| ||||||||||||| || |||||||   |||||| |||| | ||||||||||| || |||||||| ||| |||||||    
T  46973140 aaattgttgttgacacatttcattaggctgagacacacaagtaaaatacgattttgcccccttggcagttaactgccgaggaattcaaaaaccggctgca 46973239  T
Q  180 gttaactgctgagga 194  Q
    ||||||||| |||||    
T  46973240 gttaactgccgagga 46973254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 80 - 194
Target Start/End: Original strand, 13173772 - 13173885
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||||||||||||||||||||||||||||| |||| || |||||||   |||||| |||||| |||||||||||||  |||||||| ||| |||||||    
T  13173772 aaattgttgttgacacatttcataaggctgaggcacacaagtaaaatactattttgccccctcggcagttaactgctg-ggaattcaaaaaccggctgca 13173870  T
Q  180 gttaactgctgagga 194  Q
    |||||| || |||||    
T  13173871 gttaacagccgagga 13173885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 81 - 194
Target Start/End: Original strand, 11183123 - 11183236
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    ||||||||||||||||||| |||||||||||| | |  | |||||||  |||||||||||| |||||||||||||||| ||||| || | | ||||||||    
T  11183123 aattgttgttgacacatttgataaggctgagaaatacgagtaaaatacgtttttgctcccttgacagttaactgctgaggaattaaaaatccggctgcag 11183222  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  11183223 ttaactgccgagga 11183236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 41804170 - 41804056
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||||||||||||||||| ||||||||||| |||| || |||||||   |||||| || ||| ||||||||||| || |||||||| ||| | |||||    
T  41804170 aaattgttgttgacacattttataaggctgaggcacacaagtaaaatacgcttttgccccttcggcagttaactgccgaggaattcaaaaaccgactgca 41804071  T
Q  180 gttaactgctgagga 194  Q
    ||||||||| |||||    
T  41804070 gttaactgccgagga 41804056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 80 - 193
Target Start/End: Original strand, 36908514 - 36908627
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||| ||||||||||||| |||||| |||| |||| || ||||||| ||||||||  ||||| ||||||||||  || |||||||| ||| |||||||    
T  36908514 aaattgatgttgacacattttataaggatgaggcacacaagtaaaatacatttttgcctcctcggcagttaactgtcgaagaattcaaaaaccggctgca 36908613  T
Q  180 gttaactgctgagg 193  Q
    ||||||||| ||||    
T  36908614 gttaactgccgagg 36908627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 81 - 194
Target Start/End: Original strand, 46141719 - 46141832
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||||| ||| ||||||||||||  ||| || |||||||   |||||| | |||| ||||||||||| || |||||||||||| ||||||||    
T  46141719 aattgttgttgacatattgcataaggctgaggtacacaagtaaaatacgattttgccctctcggcagttaactgccgaggaattcaataaccggctgcag 46141818  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  46141819 ttaactgccgagga 46141832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 194
Target Start/End: Original strand, 13972001 - 13972112
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||||||||||||||||||||||| ||| || |||||||  ||||||| || ||| ||||| ||||| || ||||| || ||||||||||||    
T  13972001 aattgttgttgacacatttcataaggctgagaaacacaagtaaaatacgtttttgccccttcggcagtt-actgccgaggaatt-aaaaactggctgcag 13972098  T
Q  181 ttaactgctgagga 194  Q
    ||||| || |||||    
T  13972099 ttaacagccgagga 13972112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 13178267 - 13178155
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    ||||||||||||||||||||||| |||||  || ||   | |||||||  |||||||||||||| ||||||||||||||  |||| || |||  ||||||    
T  13178267 aaattgttgttgacacatttcattaggctatgaaacg--agtaaaatacgtttttgctccctcggcagttaactgctgagaaatttaaaaaccagctgca 13178170  T
Q  180 gttaactgctgagga 194  Q
    |||||||||||||||    
T  13178169 gttaactgctgagga 13178155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 202
Target Start/End: Complemental strand, 35527150 - 35527028
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||| | ||||||||||||||||||||||| |||| || |||||||  |||||||   || | ||||||| ||| || ||| |||| ||| |||||||    
T  35527150 aaattgctcttgacacatttcataaggctgaggcacacaagtaaaatacgtttttgccttcttggcagttaattgccgaagaaatcaaaaacaggctgca 35527051  T
Q  180 gttaactgctgaggatcttctgc 202  Q
    ||||||||  |||||||||||||    
T  35527050 gttaactgtagaggatcttctgc 35527028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 194
Target Start/End: Complemental strand, 18975256 - 18975143
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    ||||||||||||||||||  |||| ||||||  ||| || |||||||  ||||||| |||||| | ||||||||  || ||||| ||||||||| |||||    
T  18975256 aattgttgttgacacattgtataaagctgaggtacacaagtaaaatacgtttttgccccctcggcggttaactgtcgaggaatttaataactggttgcag 18975157  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  18975156 ttaactgcagagga 18975143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 194
Target Start/End: Complemental strand, 23276244 - 23276131
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||| || ||||| |||||||||||| |||  | |||||||  ||||||| |||||| |||||||||||||| ||||| || | | |||| |||    
T  23276244 aattgttgttcacgcatttgataaggctgagaaacacgagtaaaatacgtttttgccccctcggcagttaactgctgaggaattaaaaatccggctacag 23276145  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  23276144 ttaactgccgagga 23276131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 194
Target Start/End: Original strand, 26633466 - 26633577
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    ||||||||||||||||||||||||||| |||| |||| || |||||||   |||||| ||||||   ||||||| | || |||||||| ||| || ||||    
T  26633466 aaattgttgttgacacatttcataaggttgaggcacacaagtaaaatacgcttttgccccctcg---gttaactaccgaagaattcaaaaaccggttgca 26633562  T
Q  180 gttaactgctgagga 194  Q
    ||||||||| |||||    
T  26633563 gttaactgccgagga 26633577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 184
Target Start/End: Original strand, 35521550 - 35521654
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||||||||||||||||| ||||||||||| |||| || |||||||   |||||| | |||| ||||||||||| || ||| | || ||| |||||||    
T  35521550 aaattgttgttgacacattttataaggctgaggcacacaagtaaaatacgattttgccctctcggcagttaactgccgaggaaataaaaaaccggctgca 35521649  T
Q  180 gttaa 184  Q
    |||||    
T  35521650 gttaa 35521654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 19499247 - 19499135
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||||||||  ||||| ||||||| |||||||||| || |||||||  ||||||  |||||||||||||||||||||  |||| || |   |||||||    
T  19499247 aaattgttgttcgcacatatcataagactgagacacacaagtaaaatacgtttttg--ccctcgacagttaactgctgagaaatttaaaattcggctgca 19499150  T
Q  180 gttaactgctgagga 194  Q
    ||||||||| |||||    
T  19499149 gttaactgccgagga 19499135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 80 - 183
Target Start/End: Complemental strand, 21944517 - 21944414
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||  |||||   ||||||| || ||||||  ||  |||| || ||| |||||||    
T  21944517 aaattgttgttgacacatatcataaggctgggacacataaataaaatacgtttttatcccctcgatagataactgtcgagaaatttaaaaaccggctgca 21944418  T
Q  180 gtta 183  Q
    ||||    
T  21944417 gtta 21944414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 186
Target Start/End: Complemental strand, 6437675 - 6437570
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||||||||| ||||| |||||| |||| || |||||||   |||||| | |||| ||||||||||| || ||| |||||||  | ||||||    
T  6437675 aattgttgttgacacattgcataaagctgaggcacacaagtaaaatacgcttttgccctctcggcagttaactgccgaggaagtcaataatcgactgcag 6437576  T
Q  181 ttaact 186  Q
    ||||||    
T  6437575 ttaact 6437570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 1656221 - 1656155
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacag 147  Q
    ||||||||||||||||||||||||||| ||||| |||  | |||||||| ||||||| ||||||||||    
T  1656221 aaattgttgttgacacatttcataaggttgagaaacacgagtaaaatatgtttttgc-ccctcgacag 1656155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 49927649 - 49927542
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    ||||||||||||||||||||||| ||| |||| |||  | |||||||  ||||||  |||||| ||||||||||| || ||||| || ||| ||||  ||    
T  49927649 aattgttgttgacacatttcatatggccgagaaacacgagtaaaatacgtttttgtcccctcggcagttaactgccgaagaatttaaaaaccggctatag 49927550  T
Q  181 ttaactgc 188  Q
    ||||||||    
T  49927549 ttaactgc 49927542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 36076694 - 36076581
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||| |||||||||||||||||||||||||| ||| || |||||||   |||| | || |||  |||||||  | || |||||||| ||| |||||||    
T  36076694 aaattgctgttgacacatttcataaggctgagaaacacaagtaaaata-cgttttaccccttcggtagttaaccaccgaggaattcaaaaaccggctgca 36076596  T
Q  180 gttaactgctgagga 194  Q
    ||||||||| |||||    
T  36076595 gttaactgccgagga 36076581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 80 - 193
Target Start/End: Complemental strand, 49857984 - 49857873
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||||||||||||||||| |||||| ||||||||  || |||||||  |   ||| |||||| ||||||||||| |||||||| || ||   ||||||    
T  49857984 aaattgttgttgacacattttataaggttgagacac--aagtaaaatacgtaaatgccccctcggcagttaactgccgatgaatttaaaaatcagctgca 49857887  T
Q  180 gttaactgctgagg 193  Q
    ||||||||| ||||    
T  49857886 gttaactgccgagg 49857873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 194
Target Start/End: Original strand, 49924793 - 49924906
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||||||||| |||||||||||| ||||  | |||  ||  ||||||| || ||| || |||||||| ||  ||||||| ||| |||| |||    
T  49924793 aattgttgttgacacattgcataaggctgaggcacacgagtaatttacgtttttgccccttcggcaattaactgccgaaaaattcaaaaaccggctacag 49924892  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  49924893 ttaactgccgagga 49924906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 7965977 - 7966032
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttg 135  Q
    ||||||||||||||| ||||||||||| |||| |||| || ||||||| |||||||    
T  7965977 aaattgttgttgacatatttcataaggttgaggcacaaaagtaaaatacatttttg 7966032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 27485008 - 27485103
Alignment:
Q  93 cacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgc 188  Q
    ||||||| |||||||||||| |||  | |||||||  ||||||| |||||| |||||||||||  | ||||| || | | ||||||||||||||||    
T  27485008 cacatttgataaggctgagaaacacgagtaaaatacgtttttgccccctcggcagttaactgcctaggaattaaaaatccggctgcagttaactgc 27485103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 127
Target Start/End: Original strand, 36072306 - 36072353
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaata 127  Q
    ||||||||||||||||||||||||||| | || |||| ||||||||||    
T  36072306 aaattgttgttgacacatttcataaggttaaggcacacaaataaaata 36072353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 148
Target Start/End: Complemental strand, 36911803 - 36911737
Alignment:
Q  82 attgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagt 148  Q
    |||||||||||||||||||||||||||||| |  |||| |||||||  |||||| | ||||| ||||    
T  36911803 attgttgttgacacatttcataaggctgaggcggataagtaaaatacgtttttgtttcctcggcagt 36911737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 42570078 - 42570152
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactg 154  Q
    |||||||||||||||| ||||||||||||||| |||| || ||||| |   |||| |  ||||||||||||||||    
T  42570078 aaattgttgttgacacgtttcataaggctgaggcacacaagtaaaacacgattttacatcctcgacagttaactg 42570152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 35181334 - 35181387
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatattttt 134  Q
    |||||||||||||||||| ||||| |||||  ||||  ||||||||||||||||    
T  35181334 aattgttgttgacacattgcataaagctgaagcacacgaataaaatatattttt 35181387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 185
Target Start/End: Complemental strand, 35258997 - 35258904
Alignment:
Q  92 acacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaac 185  Q
    ||||||||||||||||||||||||| || |||||||  |   |||||  ||| ||||||||||| || ||||| || | | |||||||||||||    
T  35258997 acacatttcataaggctgagacacacaagtaaaatacgtaaatgctcattcggcagttaactgccgaggaattaaaaatccggctgcagttaac 35258904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 3e-25; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 80 - 194
Target Start/End: Original strand, 7168024 - 7168138
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||||||||||||||||||||||||||||| |||| || |||||||   |||||| |||||||| |||| |||| || |||||||| ||| |||||||    
T  7168024 aaattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgattttgccccctcgactgttagctgccgaagaattcaaaaaccggctgca 7168123  T
Q  180 gttaactgctgagga 194  Q
    ||||||||| |||||    
T  7168124 gttaactgccgagga 7168138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 18441577 - 18441470
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||||||||||||||||||||||||||| || |||||||  ||||||| |||||| ||||||||||| ||  ||||||||||| |  || ||    
T  18441577 aattgttgttgacacatttcataaggctgagacacacaagtaaaatacgtttttgccccctcggcagttaactgccgagaaattcaataaccgattgtag 18441478  T
Q  181 ttaactgc 188  Q
    ||||||||    
T  18441477 ttaactgc 18441470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 81 - 194
Target Start/End: Original strand, 18438571 - 18438684
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||||||||| |||||||||||  |||| || |||||||   |||||| || ||| |||||||||| ||| |||||||||||| ||||||||    
T  18438571 aattgttgttgacacattgcataaggctgatgcacacaagtaaaatacgcttttgccccttcggcagttaactgttgaggaattcaataaccggctgcag 18438670  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  18438671 ttaactgccgagga 18438684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 81 - 194
Target Start/End: Complemental strand, 41858257 - 41858144
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    ||||||||||||||||||||||| |||||||| |||  | |||||||  ||||||| |||||| ||||||||||  || |||||||| ||| ||||||||    
T  41858257 aattgttgttgacacatttcatatggctgagaaacacgagtaaaatacgtttttgccccctcggcagttaactggcgaagaattcaaaaaccggctgcag 41858158  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  41858157 ttaactgccgagga 41858144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 202
Target Start/End: Original strand, 3395828 - 3395950
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||| | |||||||||||||||||| |||| |||| || |||||||| ||||||| |||||  ||||||||||| || ||||| || || ||  ||||    
T  3395828 aaattgctcttgacacatttcataaggttgaggcacacaagtaaaatatgtttttgccccctcagcagttaactgccgaggaatttaaaaattgattgca 3395927  T
Q  180 gttaactgctgaggatcttctgc 202  Q
    ||||||||| |||||||||||||    
T  3395928 gttaactgccgaggatcttctgc 3395950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 82 - 194
Target Start/End: Original strand, 41855306 - 41855418
Alignment:
Q  82 attgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagt 181  Q
    |||||||||||||||||||||| |||||||| |||| | |||||||  |||||||  ||||| ||||||||||  || |||||||| ||  |||||||||    
T  41855306 attgttgttgacacatttcatatggctgagaaacatgagtaaaatacgtttttgcctcctcggcagttaactgtcgaagaattcaaaaatcggctgcagt 41855405  T
Q  182 taactgctgagga 194  Q
    ||||||| |||||    
T  41855406 taactgccgagga 41855418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 80 - 187
Target Start/End: Original strand, 22577601 - 22577708
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||| |||||||| |||||||| ||||| || ||||| ||||||||||  |||||| ||||||| ||||||| |||||| |||||||| || ||| ||||    
T  22577601 aaatcgttgttgatacatttcacaaggcagatacacacaaataaaatacgtttttgttccctcggcagttaattgctgaggaattcaaaaattggttgca 22577700  T
Q  180 gttaactg 187  Q
    ||||||||    
T  22577701 gttaactg 22577708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 194
Target Start/End: Original strand, 42602400 - 42602510
Alignment:
Q  84 tgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagtta 183  Q
    |||||||||||| ||||||| |||||||| |||  | ||||||| ||||||| ||  ||| ||||||||||| || |||||||| ||| || ||||||||    
T  42602400 tgttgttgacacgtttcatatggctgagaaacacgagtaaaatacatttttgttctatcggcagttaactgccgaagaattcaaaaaccggatgcagtta 42602499  T
Q  184 actgctgagga 194  Q
    ||||| |||||    
T  42602500 actgccgagga 42602510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 194
Target Start/End: Complemental strand, 38873066 - 38872953
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    ||||||||  |||||||| |||||||||||  |||| || ||||| |||||||||  |||||| ||||||||| | || ||||| || ||| ||||||||    
T  38873066 aattgttgacgacacattgcataaggctgatgcacacaagtaaaaaatatttttgtcccctcgtcagttaactaccgaggaatttaaaaaccggctgcag 38872967  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  38872966 ttaactgccgagga 38872953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 194
Target Start/End: Original strand, 35389445 - 35389558
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||||||||| ||||||||||||||| |  | |||  ||  |||||||  | ||||||||||||||| ||  ||||||| |||  |||||||    
T  35389445 aattgttgttgacacattgcataaggctgagacatacgagtaatttacgtttttgcctcttcgacagttaactgccgagaaattcaaaaaccagctgcag 35389544  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  35389545 ttaactgccgagga 35389558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 35940408 - 35940489
Alignment:
Q  113 cacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgctgagga 194  Q
    ||||||||||||||| ||||||||  | ||||||| ||| |||||| |||||||||||   ||||||||||||||| |||||    
T  35940408 cacataaataaaatacatttttgcctcttcgacagctaagtgctgaggaattcaataatcagctgcagttaactgccgagga 35940489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 153
Target Start/End: Original strand, 5300684 - 5300756
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaact 153  Q
    ||||||||||||||||||| |||||| ||||| |||  | |||||||  ||||||  ||||||||||||||||    
T  5300684 aattgttgttgacacatttgataaggttgagaaacacgagtaaaatacgtttttgtcccctcgacagttaact 5300756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 194
Target Start/End: Original strand, 39751011 - 39751123
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    ||||| |||||||||||| ||||| | |||| ||||  | |||||||  ||||||| |||| | || |||||||| ||||||||  | ||| ||||||||    
T  39751011 aattgctgttgacacattgcataatgttgaggcacacgagtaaaatacgtttttgcccccttggcaattaactgccgatgaatttga-aaccggctgcag 39751109  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  39751110 ttaactgccgagga 39751123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 40077386 - 40077325
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctc 142  Q
    ||||||||||||||||||| |||||||||||| |||  | |||||||  ||||||| |||||    
T  40077386 aattgttgttgacacatttgataaggctgagaaacacgagtaaaatacgtttttgccccctc 40077325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 108
Target Start/End: Original strand, 51341 - 51369
Alignment:
Q  80 aaattgttgttgacacatttcataaggct 108  Q
    |||||||||||||||||||||||||||||    
T  51341 aaattgttgttgacacatttcataaggct 51369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 4866371 - 4866407
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacaca 116  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  4866371 aaattgttgttcacacatatcataaggctgagacaca 4866407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 188
Target Start/End: Original strand, 18205738 - 18205830
Alignment:
Q  96 atttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgc 188  Q
    |||| |||||||||||| |||  | |||||||  ||||| |  ||||| | ||||||||| || |||||||| ||| ||||||||||||||||    
T  18205738 attttataaggctgagaaacacgagtaaaatacgtttttaccacctcggcggttaactgccgaagaattcaaaaaccggctgcagttaactgc 18205830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 43690162 - 43690086
Alignment:
Q  88 gttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaatt 164  Q
    |||||||||||||||||||||||   | | || |||||||  ||||||||| ||||  |||||||| ||||||||||    
T  43690162 gttgacacatttcataaggctgaagtatacaagtaaaatacgtttttgctctctcggtagttaactactgatgaatt 43690086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 8e-23; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 9494943 - 9494829
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||||||||||||||||||||||||||||| |||| || |||||||  | | ||| |||||| ||||||||||| || ||||| || ||| |||||||    
T  9494943 aaattgttgttgacacatttcataaggctgaggcacacaagtaaaataggtatatgccccctcggcagttaactgccgaggaattaaaaaaccggctgca 9494844  T
Q  180 gttaactgctgagga 194  Q
    ||||||||| |||||    
T  9494843 gttaactgccgagga 9494829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 83 - 181
Target Start/End: Complemental strand, 48316394 - 48316296
Alignment:
Q  83 ttgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagt 181  Q
    ||||||||| |||||||||||||||||||||||| || |||||||  ||||||| |||| ||||||||||||| || || ||||||||| |||||||||    
T  48316394 ttgttgttggcacatttcataaggctgagacacacaagtaaaataagtttttgcccccttgacagttaactgccgaagacttcaataaccggctgcagt 48316296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 48314611 - 48314715
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||||||||| ||||||| ||||  ||| || ||||||| |||||||| |||||| ||||||||||| || |||||||||||| ||||||||    
T  48314611 aattgttgttgacacattgcataaggttgaggtacacaagtaaaatacatttttgc-ccctcggcagttaactgccgaggaattcaataaccggctgcag 48314709  T
Q  181 ttaact 186  Q
    ||||||    
T  48314710 ttaact 48314715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 21185556 - 21185663
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||||||||| ||||| | |||||||||||| |||||||   ||||||  ||||| ||||||||||| || |||||||||||| ||||| ||    
T  21185556 aattgttgttgacacattgcataatgatgagacacataagtaaaatacgattttgcctcctcggcagttaactgccgaagaattcaataaccggctgtag 21185655  T
Q  181 ttaactgc 188  Q
    ||||||||    
T  21185656 ttaactgc 21185663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 81 - 194
Target Start/End: Original strand, 36392062 - 36392175
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||||||||| ||||||||| || |||| || |||||||  ||||||| ||||||||||||||||| ||| |||||||| ||  || ||| |    
T  36392062 aattgttgttgacacattacataaggcttaggcacacaagtaaaatacgtttttgccccctcgacagttaactgttgaggaattcaaaaatcggttgcgg 36392161  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  36392162 ttaactgccgagga 36392175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 80 - 186
Target Start/End: Complemental strand, 10225981 - 10225874
Alignment:
Q  80 aaattgttgttgacacattt-cataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgc 178  Q
    |||||||||||||||||||| |||||||||||  ||||||| |||||||| |||||||  ||||||||||||||||  ||||||| ||| || || |||     
T  10225981 aaattgttgttgacacattttcataaggctgaagcacataagtaaaatatgtttttgcctcctcgacagttaactgtcgatgaatgcaaaaattgactga 10225882  T
Q  179 agttaact 186  Q
    ||||||||    
T  10225881 agttaact 10225874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 28980309 - 28980202
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||  ||||||| |||||  |||||| |||| || |||||||||| | || |||||    
T  28980309 aattgttgttgacacattgcataaggctgagacacacgagtaaaatacgtttttgccccctcagcagttagctgccgaagaattcaatatccggatgcag 28980210  T
Q  181 ttaactgc 188  Q
    ||||||||    
T  28980209 ttaactgc 28980202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 46863480 - 46863373
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    ||||||||||||| |||| ||||||||||||||||| || |||||||  ||||||| || ||| ||||||||||| ||  |||| || ||| ||||||||    
T  46863480 aattgttgttgacgcattgcataaggctgagacacacaagtaaaatacgtttttgccccatcggcagttaactgccgagaaattgaaaaaccggctgcag 46863381  T
Q  181 ttaactgc 188  Q
    ||||||||    
T  46863380 ttaactgc 46863373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 194
Target Start/End: Complemental strand, 30355375 - 30355262
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    ||||||||||||||||||||||| | |||||| |||  | |||||||   |||||| |||||| ||||||| |||||| |||||||| ||  ||||||||    
T  30355375 aattgttgttgacacatttcatatgactgagaaacacgagtaaaatacgcttttgccccctcggcagttaattgctgaagaattcaaaaatcggctgcag 30355276  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  30355275 ttaactgccgagga 30355262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 45361586 - 45361693
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    ||||||||||  ||||||| |||||||| ||| |||| | |||||||| |||||||||||||| ||||||||||  || ||||| || | | ||||||||    
T  45361586 aattgttgttcccacatttgataaggctaagaaacatgagtaaaatatgtttttgctccctcggcagttaactgacgaggaattaaaaatccggctgcag 45361685  T
Q  181 ttaactgc 188  Q
    ||||||||    
T  45361686 ttaactgc 45361693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 171
Target Start/End: Original strand, 48269618 - 48269707
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataac 171  Q
    ||||||||||||||||||| ||||||||||| |||| || |||||||| ||||| | | |||| ||||||||||| || ||||||||||||    
T  48269618 aattgttgttgacacattttataaggctgaggcacacaagtaaaatatgttttt-ccctctcggcagttaactgccgaagaattcaataac 48269707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 194
Target Start/End: Complemental strand, 27453730 - 27453617
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||| |||||||| |||||||| ||| |||||| |||||||    ||||| |||||| ||||||||||| || ||||| || | | ||||||||    
T  27453730 aattgttgttcacacatttgataaggcttagaaacataagtaaaatacgactttgccccctcggcagttaactgccgaggaattaaaaatccggctgcag 27453631  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  27453630 ttaactgccgagga 27453617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 194
Target Start/End: Original strand, 41047715 - 41047827
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||||||||| |||||| ||| | ||||||||||||||| |||||||||  ||||  |||||||||| || ||||| |||||  || || ||    
T  41047715 aattgttgttgacacattgcataagactgcggcacataaataaaatacatttttgct-tctcggtagttaactgcagaagaatttaataatcgggtgtag 41047813  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  41047814 ttaactgccgagga 41047827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 37340239 - 37340346
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    ||||| |||||||||||| |||||| || || |||||||||||||||  ||||||   | ||||||||||||||  || |||||||| ||| || |||||    
T  37340239 aattgatgttgacacattacataagactaaggcacataaataaaatacgtttttgtctcttcgacagttaactgtcgaggaattcaaaaaccggttgcag 37340338  T
Q  181 ttaactgc 188  Q
    ||||||||    
T  37340339 ttaactgc 37340346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 156
Target Start/End: Complemental strand, 10708401 - 10708331
Alignment:
Q  86 ttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgct 156  Q
    |||||||||||||||||||| |||||| |||  | |||||||||||||||| || ||| ||||||||||||    
T  10708401 ttgttgacacatttcataagactgagaaacacgagtaaaatatatttttgccccttcggcagttaactgct 10708331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 21188473 - 21188415
Alignment:
Q  144 acagttaactgctgatgaattcaataactggctgcagttaactgctgaggatcttctgc 202  Q
    |||||||||||| || |||||||| ||| |||||||||||||||| |||||||||||||    
T  21188473 acagttaactgccgaggaattcaaaaaccggctgcagttaactgccgaggatcttctgc 21188415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 28112778 - 28112852
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactg 154  Q
    ||||||||||||||||||||||||||| ||||||||| || |||||||   |||||| | |||| ||||||||||    
T  28112778 aaattgttgttgacacatttcataaggttgagacacacaagtaaaatacgcttttgccctctcggcagttaactg 28112852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 187
Target Start/End: Original strand, 34622436 - 34622542
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||||||||| |||||||||||| |||| || |||  ||  ||||||| |||| ||||||||||||| || ||||| |  ||| | ||||||    
T  34622436 aattgttgttgacacattgcataaggctgaggcacacaagtaatttacgtttttgcccccttgacagttaactgcagaggaattaagaaaccgactgcag 34622535  T
Q  181 ttaactg 187  Q
    |||||||    
T  34622536 ttaactg 34622542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 194
Target Start/End: Complemental strand, 41049324 - 41049212
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||||||||| |||||||||||  ||||||| |||||||   ||||| | | |||  |||||||||  || |||||||||||  ||||||||    
T  41049324 aattgttgttgacacattgcataaggctgatgcacataagtaaaatacgcttttg-ttcttcggtagttaactgtcgaagaattcaataatcggctgcag 41049226  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  41049225 ttaactgccgagga 41049212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 194
Target Start/End: Original strand, 47060864 - 47060976
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||| ||||||||| |||||||||||||||| || | || |||||||  ||||||| |||||| ||||||||||  || |||||||| ||  ||||| ||    
T  47060864 aattattgttgacatatttcataaggctgaggcatacaagtaaaatacgtttttgccccctcggcagttaactgtcgaggaattcaa-aatcggctgtag 47060962  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  47060963 ttaactgccgagga 47060976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 47776281 - 47776382
Alignment:
Q  93 cacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgctgag 192  Q
    ||||||| |||||||||||| |||  | |||||||   |||||| |||||||||||||||||| ||  |||| || | |||||||||||||||||| |||    
T  47776281 cacatttgataaggctgagaaacacgagtaaaatacgattttgccccctcgacagttaactgccgagaaattaaaaatctggctgcagttaactgccgag 47776380  T
Q  193 ga 194  Q
    ||    
T  47776381 ga 47776382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 10705184 - 10705292
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||||| |||||| ||||||||||||| || |||| || ||||||| |||||| | |||| | ||||||||||| ||  |||| || ||  |||||||    
T  10705184 aaattgttattgacatatttcataaggctaaggcacacaagtaaaatacatttttccccccttggcagttaactgccgagaaattaaaaaatcggctgca 10705283  T
Q  180 gttaactgc 188  Q
    |||||||||    
T  10705284 gttaactgc 10705292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 127
Target Start/End: Complemental strand, 47673065 - 47673018
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaata 127  Q
    |||||| |||||||| ||||||||||||||||||||| ||||||||||    
T  47673065 aaattgatgttgacatatttcataaggctgagacacacaaataaaata 47673018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 36186609 - 36186496
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    ||||||||||||||||||| |||||||||| | ||||  | |||||||   |||||| |||||| ||||||| ||| || |||||| | ||| || ||||    
T  36186609 aaattgttgttgacacattgcataaggctgtgtcacacgagtaaaatacgcttttgccccctcggcagttaaatgccgaggaattcga-aaccggttgca 36186511  T
Q  180 gttaactgctgagga 194  Q
    ||||||||| |||||    
T  36186510 gttaactgccgagga 36186496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 155
Target Start/End: Complemental strand, 40590627 - 40590553
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgc 155  Q
    ||||||||||  ||||||| |||||||||||| |||  |||||||||  ||||||| |||||| |||||||||||    
T  40590627 aattgttgttcccacatttgataaggctgagaaacacgaataaaatacgtttttgccccctcggcagttaactgc 40590553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 194
Target Start/End: Original strand, 42681931 - 42682044
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    ||||||| |||||| |||| ||||||||||| ||||||| ||||||  |||||||   |||||  ||||||| | |||  ||||||| |||  |||||||    
T  42681931 aattgttcttgacatattttataaggctgaggcacataagtaaaatgcatttttgtctcctcggtagttaacggttgagaaattcaaaaaccagctgcag 42682030  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  42682031 ttaactgccgagga 42682044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 186
Target Start/End: Original strand, 46860457 - 46860553
Alignment:
Q  90 tgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaact 186  Q
    ||||||||| |||||||||||| |||| || |||||||   |||||| |||||| ||||||||||  || ||||| || ||| | ||||||||||||    
T  46860457 tgacacattacataaggctgaggcacacaagtaaaatacgcttttgccccctcggcagttaactgtcgaggaattgaaaaaccgactgcagttaact 46860553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 81 - 164
Target Start/End: Original strand, 19044231 - 19044314
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaatt 164  Q
    |||| ||||||||||||| |||||||||||| ||||| | |||||||  |||||| || |||| ||||||| ||| || |||||    
T  19044231 aattattgttgacacattgcataaggctgaggcacatgagtaaaatacgtttttgttcactcggcagttaattgccgaggaatt 19044314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 81 - 164
Target Start/End: Complemental strand, 20710405 - 20710322
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaatt 164  Q
    |||| ||||||||||||| |||||||||||| ||||| | |||||||  |||||| || |||| ||||||| ||| || |||||    
T  20710405 aattattgttgacacattgcataaggctgaggcacatgagtaaaatacgtttttgttcactcggcagttaattgccgaggaatt 20710322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 42684292 - 42684226
Alignment:
Q  88 gttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactg 154  Q
    ||||||| ||| ||||||||||||||||| || |||||||  |||||| ||| ||| ||||||||||    
T  42684292 gttgacatattgcataaggctgagacacacaagtaaaatacgtttttgttccatcggcagttaactg 42684226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 80 - 192
Target Start/End: Complemental strand, 11847 - 11735
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||| ||||||||||||| |||||  ||||| ||| || ||||||| | |||||| || ||| |||||||||||||| |||||||| ||| |||||||    
T  11847 aaattgctgttgacacattttataagattgagatacacaagtaaaatacacttttgccccttcggcagttaactgctgaagaattcaaaaaccggctgca 11748  T
Q  180 gttaactgctgag 192  Q
    |||||||||||||    
T  11747 gttaactgctgag 11735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 3e-19; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 80 - 192
Target Start/End: Original strand, 13479662 - 13479774
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||||||||||||||||||||||||||||| |||| || |||||||   |||||| ||||||  |||||||||  |  |||||||| |||  ||||||    
T  13479662 aaattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgcttttgccccctcggtagttaactgtcggggaattcaaaaaccagctgca 13479761  T
Q  180 gttaactgctgag 192  Q
    |||||||||||||    
T  13479762 gttaactgctgag 13479774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 194
Target Start/End: Complemental strand, 35021399 - 35021286
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||| |||||||||||||| ||| |||||||| |||  | ||||||| | |||||| |||||| ||||||| ||| || |||||||| ||| ||||||||    
T  35021399 aattattgttgacacattttatatggctgagaaacacgagtaaaatacacttttgccccctcggcagttaaatgcggaagaattcaaaaaccggctgcag 35021300  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  35021299 ttaactgccgagga 35021286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 194
Target Start/End: Original strand, 23958826 - 23958940
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    |||||||||||||||||| | |||||||||||||||  || |||||||  ||||||  |||||| ||||||||||| ||  ||||| | ||| |||||||    
T  23958826 aaattgttgttgacacatatgataaggctgagacacccaactaaaatacgtttttgtcccctcggcagttaactgccgagaaattccaaaaccggctgca 23958925  T
Q  180 gttaactgctgagga 194  Q
    ||||| ||| |||||    
T  23958926 gttaaatgccgagga 23958940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 100 - 183
Target Start/End: Complemental strand, 12784074 - 12783991
Alignment:
Q  100 cataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagtta 183  Q
    |||||||||||| |||| || |||||||   |||||| || ||| ||||||||||| ||||||||||||||| |||||||||||    
T  12784074 cataaggctgaggcacacaagtaaaatacgcttttgccccatcggcagttaactgccgatgaattcaataaccggctgcagtta 12783991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 153
Target Start/End: Original strand, 26701795 - 26701861
Alignment:
Q  87 tgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaact 153  Q
    |||||||||||||||| |||||||| |||| |||||||||||  |||||| | ||||||||||||||    
T  26701795 tgttgacacatttcattaggctgaggcacacaaataaaatatgattttgcccactcgacagttaact 26701861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 188
Target Start/End: Complemental strand, 23986099 - 23986010
Alignment:
Q  99 tcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgc 188  Q
    |||||||||||||||||| || |||||||  ||||||| |||| | ||||||||||| ||  ||||||| ||| || |||||||||||||    
T  23986099 tcataaggctgagacacacaagtaaaatacgtttttgcccccttggcagttaactgccgagaaattcaaaaaccggttgcagttaactgc 23986010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 13404768 - 13404661
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||| ||||||| |||||||| ||| |||| || |||||||    ||||| ||||||  |||||||||  || ||||||||||||  |||||||    
T  13404768 aattgttgttaacacattgcataaggccgaggcacacaagtaaaatacgcgtttgccccctcggtagttaactgtcgaggaattcaataacctgctgcag 13404669  T
Q  181 ttaactgc 188  Q
    ||||||||    
T  13404668 ttaactgc 13404661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 127
Target Start/End: Original strand, 32026041 - 32026088
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaata 127  Q
    |||||||||||||||||||||||||||||||| |||| || |||||||    
T  32026041 aaattgttgttgacacatttcataaggctgaggcacacaagtaaaata 32026088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 194
Target Start/End: Original strand, 2050974 - 2051078
Alignment:
Q  89 ttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgc 188  Q
    |||||||||| |||||||||||  ||||  | |||||||  |||||||||| ||| ||||||||||| ||||||||  | ||| || |||||||||||||    
T  2050974 ttgacacattgcataaggctgatgcacacgagtaaaatacgtttttgctccttcggcagttaactgccgatgaatttga-aaccggttgcagttaactgc 2051072  T
Q  189 tgagga 194  Q
     |||||    
T  2051073 cgagga 2051078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 194
Target Start/End: Original strand, 13401423 - 13401536
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    ||||| ||||||||||||| |||||| ||||  |||  | | ||||||  |||||| |||||| ||||||||||| || ||||| || ||  ||||||||    
T  13401423 aattgatgttgacacattttataaggttgagtaacacgagttaaatatgcttttgccccctcggcagttaactgccgaggaattaaaaaatcggctgcag 13401522  T
Q  181 ttaactgctgagga 194  Q
    ||||||||| ||||    
T  13401523 ttaactgctaagga 13401536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 194
Target Start/End: Complemental strand, 25141215 - 25141102
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||||||||| |||||||||||| ||||  |||||  ||||||||||  |  ||| ||||||||||  || ||||||||  ||  ||| |||    
T  25141215 aattgttgttgacacattgcataaggctgaggcacacgaataatttatatttttgtccattcggcagttaactgtcgaggaattcaaataccagctacag 25141116  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  25141115 ttaactgccgagga 25141102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 18001150 - 18001257
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 179  Q
    ||||||||||||||||||||||||||| ||||  ||| || |||||||| |   ||| |  ||| |||||||||| ||| ||||| || ||| |||||||    
T  18001150 aaattgttgttgacacatttcataaggttgaggtacacaagtaaaatatgtaaatgccctatcggcagttaactgttgaggaatt-aaaaaccggctgca 18001248  T
Q  180 gttaactgc 188  Q
    |||||||||    
T  18001249 gttaactgc 18001257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 6320625 - 6320552
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactg 154  Q
    |||||||||||||| |||| |||||| ||||| |||  |||||||||| ||||||   ||||| ||||||||||    
T  6320625 aattgttgttgacatatttgataaggttgagaaacacgaataaaatatgtttttgtctcctcggcagttaactg 6320552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 194
Target Start/End: Original strand, 29286166 - 29286279
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    |||||||||||||||||| ||||||| |||| |||| || |||  ||  ||||||| ||||||  |||||||||| || ||| | |  ||| || |||||    
T  29286166 aattgttgttgacacattgcataaggttgaggcacacaagtaatttacgtttttgccccctcggtagttaactgccgaggaaataagaaaccggttgcag 29286265  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  29286266 ttaactgccgagga 29286279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 188
Target Start/End: Complemental strand, 7433 - 7333
Alignment:
Q  88 gttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactg 187  Q
    ||||||| ||||||||||| |||| ||||| | |||||||| |||||||  ||| ||||||||| |||||| |||||||| ||| ||||||| | |||||    
T  7433 gttgacaaatttcataaggttgaggcacatgagtaaaatatgtttttgcctccttgacagttaattgctgaggaattcaaaaaccggctgcaatcaactg 7334  T
Q  188 c 188  Q
    |    
T  7333 c 7333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 194
Target Start/End: Original strand, 3823 - 3935
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 180  Q
    ||||| |||||||| |||  |||||| |||| |||| || |||||||| ||||||  |||||| ||||||||||  || |||||||| ||  ||||||||    
T  3823 aattgatgttgacaaattggataaggttgaggcacacaagtaaaatat-tttttgtcccctcggcagttaactgtcgaggaattcaaaaatcggctgcag 3921  T
Q  181 ttaactgctgagga 194  Q
    |||||||| |||||    
T  3922 ttaactgccgagga 3935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 81 - 187
Target Start/End: Complemental strand, 570 - 464
Alignment:
Q  81 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataa-ctggctgca 179  Q
    ||||| |||| |||||||| ||||| |||||| |||  | |||||||   ||||||||||||| ||||||||||| || ||||| ||||| | |||||||    
T  570 aattgatgtttacacatttgataagactgagaaacacgagtaaaatacgattttgctccctcggcagttaactgccgaagaatt-aataatccggctgca 472  T
Q  180 gttaactg 187  Q
    ||||||||    
T  471 gttaactg 464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 932 - 884
Alignment:
Q  80 aaattgttgttgacacatttcataaggctgagacacataaataaaatat 128  Q
    |||||| |||||||| |||||||||||||||| |||| || ||||||||    
T  932 aaattgctgttgacatatttcataaggctgaggcacacaagtaaaatat 884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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