View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13262_high_19 (Length: 386)
Name: NF13262_high_19
Description: NF13262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13262_high_19 |
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Alignment Details
Target: chr7 (Bit Score: 319; Significance: 1e-180; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 19 - 376
Target Start/End: Original strand, 41377504 - 41377864
Alignment:
| Q |
19 |
cagggtagtgttaagaacactactaacagaaaatatttattgataaaaattaattgacacaatttctaagacaaaatttccacgttgaggttttacatgt |
118 |
Q |
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| T |
41377504 |
cagggtagtgttaagaacaataataacagaaaatatttattgataaaaataaattgacaaaatttctaagacaaaatttccacgttgaggttttacatgt |
41377603 |
T |
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| Q |
119 |
taccatttcccatataataataataaccaaccatgcataaaaa---atatgagtgtccaataaataatgtttatgtacttactgcaacatcatgacccct |
215 |
Q |
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| T |
41377604 |
taccatttcccatataataataataaccaaccatgcataataacaaatatgagtgttcaataaataatgtttatgtacttactgcaacatcatgacccct |
41377703 |
T |
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| Q |
216 |
gttggatatagtagcatgttgaggcttgtagttcctctttagctccccaaactctgggatcatcacactcactctgtcactcgacaaatcaattggagat |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41377704 |
gttggatatagtagcatgttgaggcttgtagttcctctttagatccccaaactctgggatcatcacactcactctgtcactcgacaaatcaattggagat |
41377803 |
T |
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| Q |
316 |
tgcatctcccctttacaagctgcccattctcttttgagatcaccccaatgtctaggtccct |
376 |
Q |
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| T |
41377804 |
tgcatctcccctttacaagctgcccattctcttttgagatcaccccaatgtctaggtccct |
41377864 |
T |
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