View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13262_high_27 (Length: 338)
Name: NF13262_high_27
Description: NF13262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13262_high_27 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 9 - 338
Target Start/End: Original strand, 6807862 - 6808193
Alignment:
| Q |
9 |
gagatgaatccaacatgacaaataagtggggtgaggtaattagattctttaactcgagtctgtatttgttacgatggagaatgaatgaaacatgctttaa |
108 |
Q |
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| T |
6807862 |
gagatgaatccaacatgacaaataagtggggtgaggtaattagattctttaacttgagtctgtatttgttacgatggagaatgaatgaaacatgctttaa |
6807961 |
T |
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| Q |
109 |
tcccttttgggacaagattgcacttgatcaataagataagatgaaaccgtgcaatgataatcttgtaatatcacttaa--atatatggtaatggggtaaa |
206 |
Q |
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| T |
6807962 |
tcccttttgggacaagattgcacttgatcaataagataagatgaaaccgtgcaatgataatcttgtaatatcacttaaatatatatggtaatggggtaaa |
6808061 |
T |
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| Q |
207 |
gtgagtgcacagtgagaaccaaacgttcctcataacactttcctaccaattaaaagtaattcttaaactaagacatagtcatagtccagaagtgtttatt |
306 |
Q |
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| T |
6808062 |
gtgagtgcacagtgagaaccaaacgttcctcataacactttcctaccaattaaaagtaattcttaaactaagacatagtcatagtccagaagtgtttatt |
6808161 |
T |
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| Q |
307 |
gtttataatatatctaagggatttgatcataa |
338 |
Q |
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| T |
6808162 |
gtttataatatatctaagggatttgatcataa |
6808193 |
T |
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