View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13262_high_46 (Length: 229)
Name: NF13262_high_46
Description: NF13262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13262_high_46 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 35 - 229
Target Start/End: Original strand, 33034068 - 33034262
Alignment:
| Q |
35 |
cttatctgtattgtgagaatttcaattttcgccccgactactacatggtaagtaatgtcataagtttggaaaagttcgtgagcatcatcaactagttatg |
134 |
Q |
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| T |
33034068 |
cttatctgtattgtgagaatttcaattttcgccccgactactacatggtaagtaatgtcataagtttggaaaagttcgtgagcatcatcaactagttatg |
33034167 |
T |
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| Q |
135 |
tattttccaatgcttttaagcattattttcatacttatgattttgcaggtcatccatgtgtttgatcaacctcaaagtgaaatgatattttttct |
229 |
Q |
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| T |
33034168 |
tattttccaatgcttttaagcattattttcatacttatgattttgcaggtcatccatgtgtttgatcaacctcaaagtgaaatgatattttttct |
33034262 |
T |
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