View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13262_high_49 (Length: 226)
Name: NF13262_high_49
Description: NF13262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13262_high_49 |
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Alignment Details
Target: chr3 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 7 - 225
Target Start/End: Original strand, 40375357 - 40375576
Alignment:
| Q |
7 |
aatttcttattcacacacgaaacattccatcatctgaaaaatttcctaaatatctcgttttaacaaaaattaaattccccacccacccataaaattaatt |
106 |
Q |
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| T |
40375357 |
aatttcttattcacacacgaaacattccatcatctgaaaaatttcctaaatatctcgttttaacaaaaattaaattccccacccacccataaaattaatt |
40375456 |
T |
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| Q |
107 |
attaccacaatttgactcccatacacagtcc-nnnnnnnatataaagttgaccaccactaacccattcagactgcataatctaatacaaatattaattat |
205 |
Q |
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| T |
40375457 |
attaccacaatttaactcccatacacagtccttttttttatacaaagttgaccaccactaacccattcagactgcataatctaatacaaatattaattat |
40375556 |
T |
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| Q |
206 |
acaactatataatgttttta |
225 |
Q |
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|||||||||||||||||||| |
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| T |
40375557 |
acaactatataatgttttta |
40375576 |
T |
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