View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13262_low_41 (Length: 250)
Name: NF13262_low_41
Description: NF13262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13262_low_41 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 10 - 250
Target Start/End: Complemental strand, 2408683 - 2408443
Alignment:
| Q |
10 |
gcagagatgtaagcaccatcaatgacggttccaaaaagaacattcttgaaagcaagcaggaggatggaaaaatacataaggtttggcctagtttagaatc |
109 |
Q |
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| T |
2408683 |
gcagagatgtaagcaccatcaatgacggttccaaaaagaacattcttgaaagcaagcaggaggatggaaaaatacataaggtttggcctagtttagaatc |
2408584 |
T |
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| Q |
110 |
tcactgatgttgttttaacttcccacctacttgattgataatctttatgaccttgaaacagaaatctacatcgacaacaactggttctcaagttgtaaaa |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2408583 |
tcactgatgttgttttaacttcccacctacttgattgataatctttatgaccttgaaacagaaatctacatcgacaacaactggttctcaagttgtaaaa |
2408484 |
T |
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| Q |
210 |
tacagaaaattaaagcccacaaatcctaagccgtttaagtt |
250 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
2408483 |
tacagaaaattaaagcccacaaatcctaagccgtttaagtt |
2408443 |
T |
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