View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13262_low_46 (Length: 235)
Name: NF13262_low_46
Description: NF13262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13262_low_46 |
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Alignment Details
Target: chr2 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 15 - 189
Target Start/End: Original strand, 1612214 - 1612388
Alignment:
| Q |
15 |
cacagagaataaaaacaaacaaaccaaacacttacgttggcagcatgtgtgttaagtattcagaaacactttttgtgccaagtagataacttctctgcac |
114 |
Q |
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| T |
1612214 |
cacagagaataaaaacaaacaaaccaaacacttacgttggcagcatgtgtgttaagtattcagaaacactttttgtgccaagtagataacttctctgcac |
1612313 |
T |
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| Q |
115 |
aactacaaatactaatctcaatctcttgaatcggatatttaccattttagatacacgttcgtttcatatatatcc |
189 |
Q |
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| T |
1612314 |
aactacaaatactaatctcaatctcttgaatccgatatttaccattttagatacacgttcgtttcatatatatcc |
1612388 |
T |
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