View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13263_low_19 (Length: 252)
Name: NF13263_low_19
Description: NF13263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13263_low_19 |
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Alignment Details
Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 46788749 - 46788984
Alignment:
| Q |
1 |
ataattttgaaatttcatgagttagtaaacttaattattttttattaaaagataaaatcaaaataaagagataaagttgatgctatcaattagacatttg |
100 |
Q |
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| T |
46788749 |
ataattttgaaatttcatgagttagtaaacttaattattttttattaaaatataaaatcaaaataaagagataaagttgatgctatcaattagacatttg |
46788848 |
T |
|
| Q |
101 |
ttcataattcaaatttactttcgtatatatgagatgaatttttggattcttaagaaagattctggtgataaccacaaccttgctaggagttgtagctttt |
200 |
Q |
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| T |
46788849 |
ttcataattcaaatttactttcgtatatatgagatgaatttttggattcttaagaaagattctagtgataaccaaaaccttgctaggagttgtagctttt |
46788948 |
T |
|
| Q |
201 |
gaatactacttgaaggaaaaggttcaagtgtacttg |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
46788949 |
gaatactacttgaaggaaaaggttcaagtgtacttg |
46788984 |
T |
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