View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13266_low_5 (Length: 373)
Name: NF13266_low_5
Description: NF13266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13266_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 20 - 368
Target Start/End: Complemental strand, 42972074 - 42971725
Alignment:
| Q |
20 |
ccttctgggatagggacatactccttcaatctacactgctatatgcctgaatttctatagcaagagtttcagacaggaaacagcacaaccaaaggagtgt |
119 |
Q |
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| T |
42972074 |
ccttctgggatagggacatactccttcaatctacactgctatatgcctgaatttctatagcaagagtttcagacaggaaacagcacaaccaaaggagtgt |
42971975 |
T |
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| Q |
120 |
tgagaataggatatggataattaacagaacacccgtaagcactacaactacaactgtctgactcagccaggaaataagttcactaaaaatattatt-ttt |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |
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| T |
42971974 |
tgagaataggatatggataattaacagaacacccgtaagcactacaactacaactgtctgactcagccagtaaataagttcactaaaaatattatttttt |
42971875 |
T |
|
| Q |
219 |
tagttnnnnnnnngtgggatttctcttacaaaagggatcataaacaactttaagagcgactaaaactattcttgtaataagttcaagaatctacgttttc |
318 |
Q |
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||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
42971874 |
tagttaaaaaaaagtgggatttctcttgcaaaagggatcataaacaactttaatagcgactaaaactattcttgtaataagttcaataatctacgttttc |
42971775 |
T |
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| Q |
319 |
tcgggcagcacttcagtgtctttgcctttgtctttggtgcctttgcttct |
368 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||| |||| |
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| T |
42971774 |
tcgggccgcacttcagtgtctttgcctttgtctttggtgcctttgtttct |
42971725 |
T |
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