View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13267_high_3 (Length: 452)
Name: NF13267_high_3
Description: NF13267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13267_high_3 |
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Alignment Details
Target: chr6 (Bit Score: 387; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 387; E-Value: 0
Query Start/End: Original strand, 4 - 431
Target Start/End: Complemental strand, 1016346 - 1015917
Alignment:
| Q |
4 |
attttctcaaattattaccgatgtgttagtgttgtttaatgaaatgttttgtagcatgacacttccgatcaaagatgtgtctggcgactgactgtctgtc |
103 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |
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| T |
1016346 |
attttctcaaattattaccgatgtgttagtgttgtttaatgaaatgttttgtagcatgacacttatgatcaaagatgtgtctggtgactgactgtctgtc |
1016247 |
T |
|
| Q |
104 |
tgtctgacgcttgtccaacaacgacacatgtgattacattcgtttcgtttgtgttattttcttagtgacgctaatgtgtcggtgttggtgtgtttttgtt |
203 |
Q |
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||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
1016246 |
tgtctcacacttgtccaacaacgacacatgtgattacattcgtttcgtttgtgttattttcttagtgacgttaatgtgtcggtgttggtgtgtttttgtt |
1016147 |
T |
|
| Q |
204 |
ggcacttcgtagatgaaatgttctttagagtttaattacattcaattatgtaatttttctcgaattattgttgagatcaatgtgttggtgttagtgtgtt |
303 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
1016146 |
ggcacttcatagatgaaatgttctttagagtttaattacattcaattatgtaatttttctcgaattattgttgatatcaatgtgttggtgttagtgtgtt |
1016047 |
T |
|
| Q |
304 |
tgtgtcggtgcttggtttagagtttaaattcgacgatgtaagtgtagaaagatttgtgcatgaattgcaactaattatttg--tgacttttgaattggtt |
401 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
1016046 |
tgtgtcggtgcttggtttagagtttaaattcgacgatgtaagtgtagaaagatttgtgcatgaattgcaactaattatttgtatgacttttgaattggtt |
1015947 |
T |
|
| Q |
402 |
gtggtaaaagttgaatgtgtctgatgatgt |
431 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
1015946 |
gtggtaaaagttgaatgtgtctgatgatgt |
1015917 |
T |
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