View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13269_low_1 (Length: 674)

Name: NF13269_low_1
Description: NF13269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13269_low_1
NF13269_low_1
[»] chr3 (33 HSPs)
chr3 (19-472)||(36202470-36202923)
chr3 (473-527)||(45969917-45969971)
chr3 (473-527)||(9266977-9267031)
chr3 (473-527)||(14171908-14171962)
chr3 (473-527)||(14262358-14262412)
chr3 (473-527)||(45970238-45970292)
chr3 (473-527)||(16721993-16722047)
chr3 (473-527)||(19112766-19112820)
chr3 (473-527)||(19720335-19720389)
chr3 (473-527)||(27946187-27946241)
chr3 (473-527)||(30500362-30500416)
chr3 (473-527)||(35995680-35995734)
chr3 (473-527)||(49986529-49986583)
chr3 (476-527)||(14162192-14162243)
chr3 (476-527)||(27946114-27946165)
chr3 (473-527)||(5800607-5800661)
chr3 (473-527)||(9267296-9267350)
chr3 (473-527)||(16722313-16722367)
chr3 (473-527)||(19113087-19113141)
chr3 (473-527)||(35995997-35996051)
chr3 (473-526)||(24490242-24490295)
chr3 (476-527)||(5800927-5800977)
chr3 (476-523)||(14262041-14262088)
chr3 (476-527)||(30500048-30500099)
chr3 (473-527)||(11003734-11003788)
chr3 (473-527)||(15328465-15328519)
chr3 (473-519)||(20853697-20853743)
chr3 (473-527)||(33372408-33372462)
chr3 (473-527)||(43572391-43572445)
chr3 (473-527)||(49986850-49986904)
chr3 (476-524)||(3425973-3426021)
chr3 (473-521)||(14161873-14161921)
chr3 (474-526)||(17649332-17649384)
[»] chr4 (28 HSPs)
chr4 (473-526)||(41946967-41947020)
chr4 (473-527)||(31218303-31218357)
chr4 (474-524)||(3018014-3018064)
chr4 (473-527)||(9397020-9397074)
chr4 (473-523)||(9516612-9516662)
chr4 (473-527)||(9618982-9619036)
chr4 (473-527)||(9619301-9619355)
chr4 (473-519)||(15641046-15641092)
chr4 (473-527)||(35376165-35376219)
chr4 (473-527)||(37013028-37013082)
chr4 (473-527)||(38573971-38574025)
chr4 (473-527)||(46046432-46046486)
chr4 (473-527)||(46046746-46046799)
chr4 (473-527)||(48259825-48259879)
chr4 (474-527)||(38574290-38574343)
chr4 (479-527)||(15640724-15640772)
chr4 (473-524)||(3273623-3273674)
chr4 (476-519)||(48580196-48580239)
chr4 (473-527)||(9516932-9516986)
chr4 (473-527)||(26252559-26252613)
chr4 (473-527)||(31090062-31090116)
chr4 (473-527)||(31090383-31090437)
chr4 (481-527)||(31943959-31944005)
chr4 (473-527)||(34063984-34064038)
chr4 (473-523)||(41947180-41947230)
chr4 (474-527)||(9396702-9396755)
chr4 (474-527)||(35376449-35376502)
chr4 (473-525)||(3273943-3273994)
[»] chr8 (23 HSPs)
chr8 (473-527)||(5554871-5554925)
chr8 (473-527)||(10108372-10108426)
chr8 (473-527)||(21148258-21148312)
chr8 (473-527)||(30789829-30789883)
chr8 (473-527)||(43851667-43851721)
chr8 (473-527)||(10171465-10171519)
chr8 (473-527)||(14820297-14820351)
chr8 (473-523)||(18044153-18044203)
chr8 (476-527)||(10108692-10108743)
chr8 (476-527)||(14820616-14820667)
chr8 (476-527)||(21147941-21147992)
chr8 (473-523)||(7689849-7689899)
chr8 (473-525)||(26137008-26137060)
chr8 (479-527)||(42112993-42113041)
chr8 (476-527)||(26136690-26136741)
chr8 (473-523)||(7689526-7689576)
chr8 (473-527)||(14767826-14767880)
chr8 (473-527)||(17622892-17622946)
chr8 (473-527)||(35367412-35367466)
chr8 (473-527)||(43481637-43481691)
chr8 (476-525)||(20877069-20877118)
chr8 (482-527)||(30789519-30789564)
chr8 (479-527)||(5555191-5555239)
[»] chr7 (29 HSPs)
chr7 (473-527)||(28218180-28218234)
chr7 (473-527)||(28218485-28218539)
chr7 (473-527)||(12006543-12006597)
chr7 (473-527)||(20419538-20419592)
chr7 (473-527)||(20963815-20963869)
chr7 (473-527)||(23704982-23705036)
chr7 (473-527)||(41600280-41600334)
chr7 (473-527)||(48672279-48672333)
chr7 (473-526)||(23383823-23383876)
chr7 (473-525)||(23383501-23383553)
chr7 (473-527)||(20419859-20419913)
chr7 (473-519)||(23704664-23704710)
chr7 (473-527)||(25772653-25772707)
chr7 (473-527)||(48672601-48672655)
chr7 (473-522)||(38880048-38880097)
chr7 (473-517)||(20459022-20459066)
chr7 (606-674)||(47143319-47143387)
chr7 (473-527)||(6465857-6465911)
chr7 (473-527)||(7658287-7658341)
chr7 (473-527)||(10409695-10409749)
chr7 (473-527)||(12006862-12006916)
chr7 (473-527)||(16995202-16995256)
chr7 (473-527)||(20458694-20458748)
chr7 (473-527)||(20963496-20963550)
chr7 (473-523)||(24195198-24195248)
chr7 (473-527)||(38879725-38879779)
chr7 (473-523)||(41599960-41600010)
chr7 (474-527)||(7657972-7658025)
chr7 (473-521)||(25772366-25772414)
[»] chr6 (12 HSPs)
chr6 (473-527)||(9481184-9481238)
chr6 (473-527)||(24731937-24731991)
chr6 (473-527)||(32017825-32017879)
chr6 (474-527)||(26385596-26385649)
chr6 (475-526)||(10321737-10321788)
chr6 (473-527)||(18500317-18500371)
chr6 (473-523)||(18500655-18500705)
chr6 (473-523)||(30617969-30618019)
chr6 (474-521)||(30458903-30458950)
chr6 (473-527)||(2299635-2299689)
chr6 (473-523)||(26385280-26385330)
chr6 (473-527)||(34884559-34884613)
[»] chr5 (21 HSPs)
chr5 (473-527)||(6817125-6817179)
chr5 (473-527)||(14143904-14143958)
chr5 (473-527)||(14411699-14411753)
chr5 (473-527)||(23979223-23979277)
chr5 (473-527)||(17762285-17762339)
chr5 (473-527)||(18336778-18336831)
chr5 (473-527)||(24837171-24837225)
chr5 (473-527)||(24837491-24837545)
chr5 (473-527)||(993752-993806)
chr5 (473-527)||(17762604-17762658)
chr5 (473-527)||(24074305-24074359)
chr5 (473-523)||(24651025-24651075)
chr5 (473-527)||(30512290-30512344)
chr5 (473-527)||(30552630-30552684)
chr5 (473-527)||(31799642-31799696)
chr5 (473-523)||(41001678-41001728)
chr5 (473-522)||(7126244-7126293)
chr5 (475-523)||(31799965-31800013)
chr5 (476-527)||(7125923-7125974)
chr5 (473-527)||(4919311-4919365)
chr5 (473-527)||(18336469-18336523)
[»] chr2 (20 HSPs)
chr2 (473-527)||(19251791-19251845)
chr2 (473-527)||(17463413-17463467)
chr2 (473-525)||(17850589-17850641)
chr2 (476-527)||(19251476-19251527)
chr2 (476-527)||(23854693-23854744)
chr2 (476-527)||(42670722-42670773)
chr2 (473-527)||(17850908-17850962)
chr2 (473-527)||(22263515-22263569)
chr2 (473-527)||(23806274-23806328)
chr2 (473-523)||(26236420-26236470)
chr2 (473-527)||(34548576-34548630)
chr2 (474-527)||(13254758-13254811)
chr2 (473-518)||(23855025-23855070)
chr2 (473-524)||(26560880-26560931)
chr2 (473-527)||(15106387-15106441)
chr2 (473-527)||(20498749-20498803)
chr2 (473-527)||(26236129-26236183)
chr2 (476-525)||(12419046-12419095)
chr2 (476-525)||(12431106-12431155)
chr2 (482-527)||(26135828-26135873)
[»] chr1 (20 HSPs)
chr1 (473-527)||(18462288-18462342)
chr1 (476-527)||(17606628-17606679)
chr1 (473-527)||(4906964-4907018)
chr1 (473-527)||(39711394-39711448)
chr1 (474-527)||(17606307-17606360)
chr1 (473-524)||(33628692-33628743)
chr1 (476-527)||(33629012-33629063)
chr1 (473-527)||(18342339-18342393)
chr1 (473-527)||(20995700-20995754)
chr1 (473-527)||(29696567-29696621)
chr1 (473-527)||(39826368-39826422)
chr1 (473-523)||(48072287-48072337)
chr1 (606-674)||(29682778-29682846)
chr1 (473-527)||(8292806-8292860)
chr1 (473-527)||(24467631-24467685)
chr1 (473-527)||(39711076-39711129)
chr1 (473-527)||(39970968-39971022)
chr1 (473-527)||(52058330-52058384)
chr1 (473-527)||(24467949-24468000)
chr1 (473-521)||(52058013-52058061)
[»] scaffold0449 (1 HSPs)
scaffold0449 (473-527)||(7522-7576)
[»] scaffold0185 (1 HSPs)
scaffold0185 (473-527)||(3871-3925)
[»] scaffold0117 (1 HSPs)
scaffold0117 (476-525)||(12306-12355)
[»] scaffold0141 (1 HSPs)
scaffold0141 (473-524)||(8327-8378)
[»] scaffold0361 (2 HSPs)
scaffold0361 (473-527)||(4564-4618)
scaffold0361 (473-527)||(4884-4938)
[»] scaffold0809 (1 HSPs)
scaffold0809 (473-525)||(1730-1782)
[»] scaffold0352 (2 HSPs)
scaffold0352 (473-527)||(6001-6055)
scaffold0352 (473-525)||(4669-4721)
[»] scaffold0176 (1 HSPs)
scaffold0176 (473-527)||(15950-16004)


Alignment Details
Target: chr3 (Bit Score: 413; Significance: 0; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 413; E-Value: 0
Query Start/End: Original strand, 19 - 472
Target Start/End: Complemental strand, 36202923 - 36202470
Alignment:
Q  19 gcaattcaattagccatttcgagttcagttaatattttacgttatgagatataaatgtgggaatgagctattgtgggggagccaaagccacgtacggaat 118  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36202923 gcaattcaattaaccatttcgagttcagttaatattttacgttatgagatataaatgtgggaatgagctattgtgggggagccaaagccacgtacggaat 36202824  T
Q  119 aagattttattaggaaaatgaaaccttgtttgcgtaataacgttgggtgtggcatcaagtcatacttgaactgaaaagcatccttcacttgttttgtctc 218  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36202823 aagatttttttaggaaaataaaaccttgtttgcgtaataacgttgggtgtggcatcaagtcatacttgaactgaaaagcatccttcacttgttttgtctc 36202724  T
Q  219 ataagccactcgagtgaagttttgaactatgtatcaaaatgtctaatttagaataccataacataaaaataagtcaaaccactcaatatatgttgatgtt 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  36202723 ataagccactcgagtgaagttttgaactatgtatcaaaatgtctaatttagaataccataacataaaaattagtcaaaccactcaatatatgttgatgtt 36202624  T
Q  319 caatttgtaggtttggtcgcttggtagaataggtcaattccacaaatgctttatgcttgtagtagtacattcctaaaatgaatagttcattaatccttga 418  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36202623 caatttgtaggtttggtcgcttggtaggataggtcaattccacaaatgctttatgcttgtagtagtacattcctaaaatgaatagttcattaatccttga 36202524  T
Q  419 tttgataatnnnnnnnggatagatgattttgagatttagctcctctgtattttc 472  Q
    |||||||||       ||||||||||||||||||||||||||||||||||||||    
T  36202523 tttgataataaaaaaaggatagatgattttgagatttagctcctctgtattttc 36202470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 45969917 - 45969971
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  45969917 gtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctgt 45969971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 9266977 - 9267031
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  9266977 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 9267031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 14171962 - 14171908
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  14171962 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 14171908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 14262412 - 14262358
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  14262412 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 14262358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 45970292 - 45970238
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||    
T  45970292 gtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtccctgt 45970238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 16721993 - 16722047
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||||||| ||||    
T  16721993 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcactgt 16722047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 19112766 - 19112820
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||| ||| | ||||| ||||||||||||||||||||||    
T  19112766 gtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgt 19112820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 19720335 - 19720389
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||| |||||||||||||||| | ||||| ||||||||||||||||||||||    
T  19720335 gtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 19720389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 27946241 - 27946187
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||||||||| || | ||||| ||||||||||||||||||||||    
T  27946241 gtaaatacctcttttcgtcccagtaatattagcgaattccggttttagtccctgt 27946187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 30500416 - 30500362
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| ||||||| ||||||||||||||    
T  30500416 gtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgt 30500362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 35995680 - 35995734
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||| ||||| | ||||| ||||||||||||||||||||||    
T  35995680 gtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtccctgt 35995734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 49986529 - 49986583
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||||||| ||||    
T  49986529 gtaaatacctcttttcgtccctgtaatattagagaattccggttttagtcactgt 49986583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 476 - 527
Target Start/End: Complemental strand, 14162243 - 14162192
Alignment:
Q  476 aatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||| |||||||| | ||||| ||||||||||||||||||||||    
T  14162243 aatacctctttttgtccctgtaatattagcgaattccggttttagtccctgt 14162192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 476 - 527
Target Start/End: Original strand, 27946114 - 27946165
Alignment:
Q  476 aatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||||||||| | ||||| ||||| ||||||||||||||||    
T  27946114 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt 27946165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 5800607 - 5800661
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||  ||||| ||||||||||||||||    
T  5800607 gtaaatacctcttttcgtccctgtaatattaacgaatttcggttttagtccctgt 5800661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 9267350 - 9267296
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||| ||| | ||||| |||||||| |||||||||||||    
T  9267350 gtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgt 9267296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 16722367 - 16722313
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| ||||| | ||||||||||||||    
T  16722367 gtaaatacctcttttcgtccctgtaatattagcgaatttcagttttagtccctgt 16722313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 19113141 - 19113087
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||| | | ||||  ||||||||||||||||||||||    
T  19113141 gtaaatacctcttttcgtccctataatattaacgaattccggttttagtccctgt 19113087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 35996051 - 35995997
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||| ||||||||||||||| | ||||| |||||||| |||||||||||||    
T  35996051 gtaaatacatcttttcgtccctgtaatattagcgaattccgattttagtccctgt 35995997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 24490295 - 24490242
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctg 526  Q
    ||||||| || ||||| ||||||| | |||||||||||||||||||||||||||    
T  24490295 gtaaatatcttttttcctccctgtaatattagtgaattccggttttagtccctg 24490242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 527
Target Start/End: Complemental strand, 5800977 - 5800927
Alignment:
Q  476 aatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||||||||| | ||||| ||||||||| ||||||||||||    
T  5800977 aatacctcttttcgtccctgtaatattagcgaattccgg-tttagtccctgt 5800927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 523
Target Start/End: Original strand, 14262041 - 14262088
Alignment:
Q  476 aatacctcttttcgtccctgtgacattagtgaattccggttttagtcc 523  Q
    |||| |||||||||||||||| | ||||| ||||||||||||||||||    
T  14262041 aatatctcttttcgtccctgtaatattagcgaattccggttttagtcc 14262088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 527
Target Start/End: Original strand, 30500048 - 30500099
Alignment:
Q  476 aatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||| ||||||| | ||||| ||||| ||||||||||||||||    
T  30500048 aatacctcttttcatccctgtaatattagcgaatttcggttttagtccctgt 30500099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 11003734 - 11003788
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||| |||| ||| | ||||  ||||||||||||||||||||||    
T  11003734 gtaaatacctctttttgtccttgtaatattaccgaattccggttttagtccctgt 11003788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 15328465 - 15328519
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||| ||||| | |||||| |||| || |||||||||||||    
T  15328465 gtaaatacctcttttcgttcctgtaatattagtaaatttcgtttttagtccctgt 15328519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 519
Target Start/End: Original strand, 20853697 - 20853743
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggtttta 519  Q
    |||||||||||||||||||||||| | ||||| ||||| ||||||||    
T  20853697 gtaaatacctcttttcgtccctgtaatattagcgaatttcggtttta 20853743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 33372408 - 33372462
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||| |||||||||||||||| | ||||| |||||| ||||||||| |||||    
T  33372408 gtaaatatctcttttcgtccctgtaatattagcgaattctggttttagttcctgt 33372462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 43572391 - 43572445
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||| ||||||||| ||||| | ||||| ||||| ||||||||||||||||    
T  43572391 gtaaatacatcttttcgttcctgtaatattagcgaatttcggttttagtccctgt 43572445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 49986904 - 49986850
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||||||||| || | ||||| ||||| |||||||||| |||||    
T  49986904 gtaaatacctcttttcgtcccagtaatattagcgaatttcggttttagttcctgt 49986850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 476 - 524
Target Start/End: Complemental strand, 3426021 - 3425973
Alignment:
Q  476 aatacctcttttcgtccctgtgacattagtgaattccggttttagtccc 524  Q
    |||||||||||| | |||||| | ||||| |||||||||||||||||||    
T  3426021 aatacctcttttggcccctgtaatattagcgaattccggttttagtccc 3425973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 473 - 521
Target Start/End: Original strand, 14161873 - 14161921
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagt 521  Q
    ||||||| |||||||||||||||| | ||||| ||||||| ||||||||    
T  14161873 gtaaatatctcttttcgtccctgtaatattagcgaattccagttttagt 14161921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 474 - 526
Target Start/End: Complemental strand, 17649384 - 17649332
Alignment:
Q  474 taaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctg 526  Q
    |||||||||||||||| |||||| | | ||| |||||||||||||||| ||||    
T  17649384 taaatacctcttttcgaccctgtaatactagcgaattccggttttagttcctg 17649332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 7e-17; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 473 - 526
Target Start/End: Original strand, 41946967 - 41947020
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctg 526  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  41946967 gtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctg 41947020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 31218357 - 31218303
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  31218357 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 31218303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 524
Target Start/End: Original strand, 3018014 - 3018064
Alignment:
Q  474 taaatacctcttttcgtccctgtgacattagtgaattccggttttagtccc 524  Q
    ||||||||||||||||||||||| | ||||| |||||||||||||||||||    
T  3018014 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccc 3018064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 9397074 - 9397020
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||| ||||||||||||||| | |||||  |||||||||||||||||||||    
T  9397074 gtaaatacttcttttcgtccctgtaatattagcaaattccggttttagtccctgt 9397020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 523
Target Start/End: Original strand, 9516612 - 9516662
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtcc 523  Q
    ||||||| |||||||||||||||| | ||||| ||||||||||||||||||    
T  9516612 gtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtcc 9516662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 9618982 - 9619036
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||| ||||||||| ||| | ||||| ||||||||||||||||||||||    
T  9618982 gtaaatacctattttcgtccatgtaatattagcgaattccggttttagtccctgt 9619036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 9619355 - 9619301
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||| |||||||| | ||||| |||||| |||||||||||||||    
T  9619355 gtaaatacctctttttgtccctgtaatattagcgaattctggttttagtccctgt 9619301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 519
Target Start/End: Complemental strand, 15641092 - 15641046
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggtttta 519  Q
    |||||||||||||||||||| ||| | ||||||||||||||||||||    
T  15641092 gtaaatacctcttttcgtccttgtaatattagtgaattccggtttta 15641046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 35376165 - 35376219
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||| ||||||||||||| | ||||| |||||| |||||||||||||||    
T  35376165 gtaaatacctattttcgtccctgtaatattagcgaattctggttttagtccctgt 35376219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 37013082 - 37013028
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||| |||||||||||| | ||||| |||||| |||||||||||||||    
T  37013082 gtaaatacctcatttcgtccctgtaatattagcgaattctggttttagtccctgt 37013028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 38573971 - 38574025
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||| ||| | |||||||||||||| ||||| |||||||    
T  38573971 gtaaatacctcttttcgtccatgtaatattagtgaattccgattttaatccctgt 38574025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 46046432 - 46046486
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||| ||||||||||||| | ||||| |||||||| |||||||||||||    
T  46046432 gtaaataccttttttcgtccctgtaatattagcgaattccgattttagtccctgt 46046486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 46046799 - 46046746
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||| ||||||||||||| | ||||| ||||||||||||||||||||||    
T  46046799 gtaaatacct-ttttcgtccctgtaatattagcgaattccggttttagtccctgt 46046746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 48259825 - 48259879
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||| |||||||||||||||| | ||||| |||||||||||||| |||||||    
T  48259825 gtaaatatctcttttcgtccctgtaatattagcgaattccggttttaatccctgt 48259879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 474 - 527
Target Start/End: Complemental strand, 38574343 - 38574290
Alignment:
Q  474 taaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||| ||||||||||||| | ||||| |||||| |||||||||||||||    
T  38574343 taaataccttttttcgtccctgtaatattagcgaattctggttttagtccctgt 38574290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 479 - 527
Target Start/End: Original strand, 15640724 - 15640772
Alignment:
Q  479 acctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||| | ||||| |||||||||||||||| |||||    
T  15640724 acctcttttcgtccctgtaatattagcgaattccggttttagttcctgt 15640772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 524
Target Start/End: Original strand, 3273623 - 3273674
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccc 524  Q
    ||||||| |||||||||||||||| | ||||| |||||||| ||||||||||    
T  3273623 gtaaatatctcttttcgtccctgtaatattagcgaattccgattttagtccc 3273674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 48580239 - 48580196
Alignment:
Q  476 aatacctcttttcgtccctgtgacattagtgaattccggtttta 519  Q
    ||||||||||||||||||||| | ||||| ||||||||||||||    
T  48580239 aatacctcttttcgtccctgtaatattagcgaattccggtttta 48580196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 9516986 - 9516932
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||| |||||||||||||||| | ||||| ||||| ||||||||||| ||||    
T  9516986 gtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtctctgt 9516932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 26252613 - 26252559
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||| |||||||||||||||| | ||||| ||||||| |||||||| |||||    
T  26252613 gtaaatatctcttttcgtccctgtaatattagcgaattccagttttagttcctgt 26252559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 31090062 - 31090116
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||| |||||| |||||||| | ||||||||||| || |||||||||||||    
T  31090062 gtaaatacttctttttgtccctgtaatattagtgaatttcgattttagtccctgt 31090116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 31090437 - 31090383
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||| |||||||||||||||| | ||||| ||||| || |||||||||||||    
T  31090437 gtaaatatctcttttcgtccctgtaatattagcgaatttcgattttagtccctgt 31090383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 481 - 527
Target Start/End: Original strand, 31943959 - 31944005
Alignment:
Q  481 ctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||| | ||||| |||||||||||||||| |||||    
T  31943959 ctcttttcgtccctgtaatattagcgaattccggttttagttcctgt 31944005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 34063984 - 34064038
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||  ||||||  ||||||||||||||    
T  34063984 gtaaatacctcttttcgtccctgtaatattaacgaattctagttttagtccctgt 34064038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 523
Target Start/End: Complemental strand, 41947230 - 41947180
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtcc 523  Q
    ||||||| |||||||||||||||| | ||||| ||||| ||||||||||||    
T  41947230 gtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtcc 41947180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 527
Target Start/End: Original strand, 9396702 - 9396755
Alignment:
Q  474 taaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||||||||||| | ||||| ||||| || |||||||| ||||    
T  9396702 taaatacctcttttcgtccctgtaatattagcgaatttcgattttagtctctgt 9396755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 527
Target Start/End: Complemental strand, 35376502 - 35376449
Alignment:
Q  474 taaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||| |||||||||||||||| | |||||  |||||| ||||||||||||||    
T  35376502 taaatatctcttttcgtccctgtaatattagcaaattccagttttagtccctgt 35376449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 473 - 525
Target Start/End: Complemental strand, 3273994 - 3273943
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccct 525  Q
    ||||||||||||||||||||| || | ||||| ||||| ||||||||||||||    
T  3273994 gtaaatacctcttttcgtccc-gtaatattagcgaatttcggttttagtccct 3273943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 5554871 - 5554925
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  5554871 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 5554925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 10108372 - 10108426
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  10108372 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 10108426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 21148312 - 21148258
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  21148312 gtaaatacctcttttcgtctctgtaatattagtgaattccggttttagtccctgt 21148258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 30789883 - 30789829
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | |||||| |||||||||||||||||||||    
T  30789883 gtaaatacctcttttcgtccctgtaatattagtaaattccggttttagtccctgt 30789829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 43851667 - 43851721
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  43851667 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 43851721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 10171519 - 10171465
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||| |||||||||||||| | ||||| ||||||||||||||||||||||    
T  10171519 gtaaataccgcttttcgtccctgtaatattagcgaattccggttttagtccctgt 10171465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 14820297 - 14820351
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| |||||||||||||||| |||||    
T  14820297 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagttcctgt 14820351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 523
Target Start/End: Complemental strand, 18044203 - 18044153
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtcc 523  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||||||||    
T  18044203 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 18044153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 476 - 527
Target Start/End: Complemental strand, 10108743 - 10108692
Alignment:
Q  476 aatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||||||||| | |||||  |||||||||||||||||||||    
T  10108743 aatacctcttttcgtccctgtaatattagcaaattccggttttagtccctgt 10108692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 476 - 527
Target Start/End: Complemental strand, 14820667 - 14820616
Alignment:
Q  476 aatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||| |||||||| | ||||| ||||||||||||||||||||||    
T  14820667 aatacctcttttagtccctgtaatattagcgaattccggttttagtccctgt 14820616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 476 - 527
Target Start/End: Original strand, 21147941 - 21147992
Alignment:
Q  476 aatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||| |||||||| | ||||| ||||||||||||||||||||||    
T  21147941 aatacctctttttgtccctgtaatattagcgaattccggttttagtccctgt 21147992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 523
Target Start/End: Complemental strand, 7689899 - 7689849
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtcc 523  Q
    |||||||||||||||||||||||| | ||||| |||||||| |||||||||    
T  7689899 gtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtcc 7689849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 473 - 525
Target Start/End: Complemental strand, 26137060 - 26137008
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccct 525  Q
    ||||||||| |||||||||||||| | ||||||||||| | ||||||||||||    
T  26137060 gtaaataccacttttcgtccctgtaatattagtgaatttcagttttagtccct 26137008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 479 - 527
Target Start/End: Original strand, 42112993 - 42113041
Alignment:
Q  479 acctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||| | ||||| |||||||| |||||||||||||    
T  42112993 acctcttttcgtccctgtaatattagcgaattccgattttagtccctgt 42113041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 527
Target Start/End: Original strand, 26136690 - 26136741
Alignment:
Q  476 aatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||| ||||| | ||||| ||||||| ||||||||||||||    
T  26136690 aatacctcttttcgttcctgtaatattagcgaattccagttttagtccctgt 26136741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 523
Target Start/End: Original strand, 7689526 - 7689576
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtcc 523  Q
    |||||||||||||||||||||||| | ||||| ||||| ||| ||||||||    
T  7689526 gtaaatacctcttttcgtccctgtaatattagcgaatttcggctttagtcc 7689576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 14767880 - 14767826
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||| ||||| | |||||| |||| || |||||||||||||    
T  14767880 gtaaatacctcttttcgttcctgtaatattagtaaatttcgtttttagtccctgt 14767826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 17622892 - 17622946
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||| ||| | ||||| ||||| | ||||||||||||||    
T  17622892 gtaaatacctcttttcgtccttgtaatattagcgaatttcagttttagtccctgt 17622946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 35367412 - 35367466
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||| |||||||  | ||||| |||||||||||||| |||||||    
T  35367412 gtaaatacctcttttggtccctgcaatattagcgaattccggttttaatccctgt 35367466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 43481691 - 43481637
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||| ||||||||||| |||| | ||||| ||||||||||||||||| ||||    
T  43481691 gtaaatatctcttttcgtcactgtaatattagcgaattccggttttagtctctgt 43481637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 525
Target Start/End: Complemental strand, 20877118 - 20877069
Alignment:
Q  476 aatacctcttttcgtccctgtgacattagtgaattccggttttagtccct 525  Q
    |||||||||||| |||||||| | || || ||||||||||||||||||||    
T  20877118 aatacctcttttggtccctgtaatatgagcgaattccggttttagtccct 20877069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 527
Target Start/End: Original strand, 30789519 - 30789564
Alignment:
Q  482 tcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||| | ||||| |||||||| |||||||||||||    
T  30789519 tcttttcgtccctgtaatattagcgaattccgattttagtccctgt 30789564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 479 - 527
Target Start/End: Complemental strand, 5555239 - 5555191
Alignment:
Q  479 acctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||| | ||||| ||||| ||||||||||| ||||    
T  5555239 acctcttttcgtccctgtaatattagcgaatttcggttttagtctctgt 5555191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 28218180 - 28218234
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  28218180 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 28218234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 28218539 - 28218485
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  28218539 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 28218485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 12006543 - 12006597
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| |||||||| |||||||||||||    
T  12006543 gtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgt 12006597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 20419538 - 20419592
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||| | | ||||| ||||||||||||||||||||||    
T  20419538 gtaaatacctcttttcgtccctataatattagcgaattccggttttagtccctgt 20419592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 20963869 - 20963815
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||| |||||||| | ||||| ||||||||||||||||||||||    
T  20963869 gtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgt 20963815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 23705036 - 23704982
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||||||| |||| | ||||| ||||||||||||||||||||||    
T  23705036 gtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtccctgt 23704982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 41600334 - 41600280
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||| |||||||| | ||||| ||||||||||||||||||||||    
T  41600334 gtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgt 41600280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 48672279 - 48672333
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||||||||| ||||||||||| ||||    
T  48672279 gtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtctctgt 48672333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 23383876 - 23383823
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctg 526  Q
    |||||||||||||||||||||||| | |||||||||||| | ||||||||||||    
T  23383876 gtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtccctg 23383823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 473 - 525
Target Start/End: Original strand, 23383501 - 23383553
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccct 525  Q
    |||||||| |||||||||| |||| | ||||||||||||||||||||||||||    
T  23383501 gtaaatacttcttttcgtctctgtaatattagtgaattccggttttagtccct 23383553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 20419913 - 20419859
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||| |||||||| | ||||  ||||||||||||||||||||||    
T  20419913 gtaaatacctctttttgtccctgtaatattaacgaattccggttttagtccctgt 20419859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 519
Target Start/End: Original strand, 23704664 - 23704710
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggtttta 519  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||||    
T  23704664 gtaaatacctcttttcgtccctgtaatattagcgaattccggtttta 23704710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 25772707 - 25772653
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||| |||||||||||||| | | ||||||||||||| ||||||||||||||    
T  25772707 gtaaatatctcttttcgtccctataatattagtgaattccagttttagtccctgt 25772653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 48672655 - 48672601
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||||||| |||| | ||||| ||||| ||||||||||||||||    
T  48672655 gtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagtccctgt 48672601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 522
Target Start/End: Complemental strand, 38880097 - 38880048
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtc 522  Q
    |||||||||||||||||||||||| | |||||  ||||||||||||||||    
T  38880097 gtaaatacctcttttcgtccctgtaatattagcaaattccggttttagtc 38880048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 473 - 517
Target Start/End: Complemental strand, 20459066 - 20459022
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttt 517  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||    
T  20459066 gtaaatacctcttttcgtccctgtaatattagggaattccggttt 20459022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 606 - 674
Target Start/End: Complemental strand, 47143387 - 47143319
Alignment:
Q  606 taaattgctacattggagtaagggtacatcgtttatgacttatcgaggtttgaaactcatgctagtttc 674  Q
    ||||||| | |||||| |||||||||| ||||||| || || ||||||||||||||| |||||| ||||    
T  47143387 taaattgatccattggtgtaagggtacttcgtttaagaattctcgaggtttgaaactaatgctattttc 47143319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 6465857 - 6465911
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||| || ||||||||| ||| | ||||| ||||||||||||||||||||||    
T  6465857 gtaaatatcttttttcgtccatgtaatattagcgaattccggttttagtccctgt 6465911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 7658341 - 7658287
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||  ||||| ||||||||||| ||||    
T  7658341 gtaaatacctcttttcgtccctgtaatattaacgaatttcggttttagtctctgt 7658287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 10409749 - 10409695
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||| ||| ||| | ||||| |||||||| |||||||||||||    
T  10409749 gtaaatacctcttttcatccatgtaatattagcgaattccgattttagtccctgt 10409695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 12006916 - 12006862
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||| | ||| | ||||| |||||||| |||||||||||||    
T  12006916 gtaaatacctcttttcgttcatgtaatattagcgaattccgattttagtccctgt 12006862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 16995202 - 16995256
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||||||| |||| | ||||| ||||| |||||||||| |||||    
T  16995202 gtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagttcctgt 16995256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 20458694 - 20458748
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||| | ||||||||||||| | ||||  ||||||||||||||||||||||    
T  20458694 gtaaatacattttttcgtccctgtaatattaacgaattccggttttagtccctgt 20458748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 20963496 - 20963550
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||| || ||||||||||||| | ||||||||||||  ||||||||||||||    
T  20963496 gtaaatatctattttcgtccctgtaatattagtgaattctagttttagtccctgt 20963550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 523
Target Start/End: Complemental strand, 24195248 - 24195198
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtcc 523  Q
    |||||||||||||||||||||||| | ||||| |||||| | |||||||||    
T  24195248 gtaaatacctcttttcgtccctgtaatattagcgaattctgattttagtcc 24195198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 38879725 - 38879779
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| |||||||  ||||||| |||||    
T  38879725 gtaaatacctcttttcgtccctgtaatattagcgaattccaattttagttcctgt 38879779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 523
Target Start/End: Original strand, 41599960 - 41600010
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtcc 523  Q
    |||||||||||||||| ||||||| | ||||| ||||| ||||||||||||    
T  41599960 gtaaatacctcttttcatccctgtaatattagcgaatttcggttttagtcc 41600010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 527
Target Start/End: Original strand, 7657972 - 7658025
Alignment:
Q  474 taaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||||||| ||| | ||||| ||||| |||||||| |||||||    
T  7657972 taaatacctcttttcgtccatgtaatattagcgaatttcggttttaatccctgt 7658025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 473 - 521
Target Start/End: Original strand, 25772366 - 25772414
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagt 521  Q
    |||||||||||||||||||||||| | ||||| ||||| || |||||||    
T  25772366 gtaaatacctcttttcgtccctgtaatattagcgaatttcgattttagt 25772414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 9481184 - 9481238
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  9481184 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 9481238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 24731937 - 24731991
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  24731937 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 24731991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 32017879 - 32017825
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||| |||||||||||||||| | ||||| ||||||||||||||||||||||    
T  32017879 gtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 32017825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 474 - 527
Target Start/End: Complemental strand, 26385649 - 26385596
Alignment:
Q  474 taaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||||||||||| | ||||| |||||||| |||||||||||||    
T  26385649 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgt 26385596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 475 - 526
Target Start/End: Original strand, 10321737 - 10321788
Alignment:
Q  475 aaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctg 526  Q
    |||||| ||||||||||||||| | ||||| |||||||||||||||||||||    
T  10321737 aaatacttcttttcgtccctgtaatattagcgaattccggttttagtccctg 10321788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 18500317 - 18500371
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||| | | ||||| ||||| ||||||||||||||||    
T  18500317 gtaaatacctcttttcgtccctataatattagcgaatttcggttttagtccctgt 18500371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 523
Target Start/End: Complemental strand, 18500705 - 18500655
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtcc 523  Q
    |||||||||||||||||||||||| | ||||| ||||| ||||||||||||    
T  18500705 gtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcc 18500655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 523
Target Start/End: Original strand, 30617969 - 30618019
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtcc 523  Q
    |||||||||||||||||||||||| | |||||||||||| | |||||||||    
T  30617969 gtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtcc 30618019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 474 - 521
Target Start/End: Original strand, 30458903 - 30458950
Alignment:
Q  474 taaatacctcttttcgtccctgtgacattagtgaattccggttttagt 521  Q
    ||||||| ||||||||||||||| | ||||||||||| ||||||||||    
T  30458903 taaatacatcttttcgtccctgtaatattagtgaatttcggttttagt 30458950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 2299689 - 2299635
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||| |||||||||| ||||| | ||||| |||||||||||||||| |||||    
T  2299689 gtaaatatctcttttcgttcctgtaatattagcgaattccggttttagttcctgt 2299635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 523
Target Start/End: Original strand, 26385280 - 26385330
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtcc 523  Q
    ||||||||||||||||||| |||| | ||||| |||||| |||||||||||    
T  26385280 gtaaatacctcttttcgtctctgtaatattagcgaattctggttttagtcc 26385330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 34884559 - 34884613
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||| |||||||||||| ||| | ||||||||||| |||||||| |||||||    
T  34884559 gtaaatatctcttttcgtccttgtaatattagtgaatttcggttttaatccctgt 34884613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 6817125 - 6817179
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||| ||| | ||||||||||||||||||||||||||||    
T  6817125 gtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgt 6817179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 14143904 - 14143958
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  14143904 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 14143958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 14411699 - 14411753
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  14411699 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 14411753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 23979277 - 23979223
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  23979277 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 23979223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 17762285 - 17762339
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||| |||||||| | ||||| ||||||||||||||||||||||    
T  17762285 gtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgt 17762339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 18336831 - 18336778
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  18336831 gtaaatacctcttttcgtccctgtaa-attagcgaattccggttttagtccctgt 18336778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 24837171 - 24837225
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | | ||| ||||||||||||||||||||||    
T  24837171 gtaaatacctcttttcgtccctgtaataatagcgaattccggttttagtccctgt 24837225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 24837545 - 24837491
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| ||||||| ||||||||||||||    
T  24837545 gtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgt 24837491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 993752 - 993806
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||| |||||||||| |||| | ||||| ||||||||||||||||||||||    
T  993752 gtaaatacttcttttcgtctctgtaatattagcgaattccggttttagtccctgt 993806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 17762658 - 17762604
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||||||||||||   ||||| |||||| |||||||||||||||    
T  17762658 gtaaatacctcttttcgtccctgtagtattagcgaattctggttttagtccctgt 17762604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 24074305 - 24074359
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||| ||| | ||||| ||||| ||||||||||||||||    
T  24074305 gtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgt 24074359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 523
Target Start/End: Complemental strand, 24651075 - 24651025
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtcc 523  Q
    ||||||||||||||||||| |||| | ||||| ||||||||||||||||||    
T  24651075 gtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtcc 24651025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 30512290 - 30512344
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||| |||||||||||||||| | |||||||||||  |||||||||||||||    
T  30512290 gtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgt 30512344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 30552630 - 30552684
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||| |||||||||||||||| | |||||||||||  |||||||||||||||    
T  30552630 gtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgt 30552684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 31799642 - 31799696
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||| | | ||||| |||||||||||| |||||||||    
T  31799642 gtaaatacctcttttcgtccctataatattagcgaattccggtttcagtccctgt 31799696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 523
Target Start/End: Complemental strand, 41001728 - 41001678
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtcc 523  Q
    |||||||||| ||||||||||||| | ||||| ||||||||||||||||||    
T  41001728 gtaaataccttttttcgtccctgtaatattagcgaattccggttttagtcc 41001678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 522
Target Start/End: Complemental strand, 7126293 - 7126244
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtc 522  Q
    |||||||||||||||| ||||||| | ||||| |||||||||||||||||    
T  7126293 gtaaatacctcttttcatccctgtaatattagcgaattccggttttagtc 7126244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 475 - 523
Target Start/End: Complemental strand, 31800013 - 31799965
Alignment:
Q  475 aaatacctcttttcgtccctgtgacattagtgaattccggttttagtcc 523  Q
    |||||||||||||||||||| | | ||||| ||||||||||||||||||    
T  31800013 aaatacctcttttcgtccctataatattagcgaattccggttttagtcc 31799965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 527
Target Start/End: Original strand, 7125923 - 7125974
Alignment:
Q  476 aatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||| ||||| | ||||| |||||||| |||||||||||||    
T  7125923 aatacctcttttcgttcctgtaatattagcgaattccgattttagtccctgt 7125974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 4919365 - 4919311
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||||||| |||  | ||||| |||||||||||||||| |||||    
T  4919365 gtaaatacctcttttcgtctctggaatattagcgaattccggttttagttcctgt 4919311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 18336469 - 18336523
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||| |||||||||||||| | | ||||| |||||||| |||||||||||||    
T  18336469 gtaaatatctcttttcgtccctataatattagcgaattccgattttagtccctgt 18336523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 19251845 - 19251791
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||| ||| | ||||||||||||||||||||||||||||    
T  19251845 gtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgt 19251791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 17463467 - 17463413
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||||| |||||| | ||||| ||||||||||||||||||||||    
T  17463467 gtaaatacctcttttcgcccctgtaatattagcgaattccggttttagtccctgt 17463413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 473 - 525
Target Start/End: Original strand, 17850589 - 17850641
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccct 525  Q
    |||||||||||||||||||||||| | ||||| |||||||| |||||||||||    
T  17850589 gtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccct 17850641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 476 - 527
Target Start/End: Original strand, 19251476 - 19251527
Alignment:
Q  476 aatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||||||||| | ||||| ||||| ||||||||||||||||    
T  19251476 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt 19251527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 476 - 527
Target Start/End: Original strand, 23854693 - 23854744
Alignment:
Q  476 aatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||||||||| | ||||| ||||| ||||||||||||||||    
T  23854693 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt 23854744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 476 - 527
Target Start/End: Original strand, 42670722 - 42670773
Alignment:
Q  476 aatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||||||||| | | ||| ||||||||||||||||||||||    
T  42670722 aatacctcttttcgtccctgtaatagtagcgaattccggttttagtccctgt 42670773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 17850962 - 17850908
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| ||||| ||||||||||| ||||    
T  17850962 gtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcactgt 17850908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 22263569 - 22263515
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||| ||||| | ||||| ||||||||||||||||| ||||    
T  22263569 gtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtctctgt 22263515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 23806328 - 23806274
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||| |||||||| | ||||| ||||| ||||||||||||||||    
T  23806328 gtaaatacctctttttgtccctgtaatattagcgaatttcggttttagtccctgt 23806274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 523
Target Start/End: Complemental strand, 26236470 - 26236420
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtcc 523  Q
    |||||||||||||||||||||||| | ||||| ||||| ||||||||||||    
T  26236470 gtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcc 26236420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 34548576 - 34548630
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||| ||||||||||||||| | |||||||||||  |||||||||||||||    
T  34548576 gtaaatacttcttttcgtccctgtaatattagtgaattttggttttagtccctgt 34548630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 474 - 527
Target Start/End: Complemental strand, 13254811 - 13254758
Alignment:
Q  474 taaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||| |||||||||||||||| | ||||| ||||||||||||||||| ||||    
T  13254811 taaatatctcttttcgtccctgtaatattagcgaattccggttttagtctctgt 13254758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 518
Target Start/End: Complemental strand, 23855070 - 23855025
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggtttt 518  Q
    |||||||||||||||||||||||| | ||||| |||||||||||||    
T  23855070 gtaaatacctcttttcgtccctgtaatattagcgaattccggtttt 23855025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 524
Target Start/End: Complemental strand, 26560931 - 26560880
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccc 524  Q
    |||||||||||||||||||| ||| | ||||| |||||||| ||||||||||    
T  26560931 gtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccc 26560880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 15106441 - 15106387
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||||||||| || | ||||| ||||| || |||||||||||||    
T  15106441 gtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagtccctgt 15106387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 20498749 - 20498803
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||  ||| | ||||| ||||| ||||||||||||||||    
T  20498749 gtaaatacctcttttcgtctatgtaatattagcgaattacggttttagtccctgt 20498803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 26236129 - 26236183
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||| |||||||||||| ||| | ||||| |||||| |||||||||||||||    
T  26236129 gtaaatatctcttttcgtccttgtaatattagcgaattctggttttagtccctgt 26236183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 525
Target Start/End: Complemental strand, 12419095 - 12419046
Alignment:
Q  476 aatacctcttttcgtccctgtgacattagtgaattccggttttagtccct 525  Q
    |||||| ||||| |||||||| | ||||| ||||||||||||||||||||    
T  12419095 aataccacttttggtccctgtaatattagcgaattccggttttagtccct 12419046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 525
Target Start/End: Complemental strand, 12431155 - 12431106
Alignment:
Q  476 aatacctcttttcgtccctgtgacattagtgaattccggttttagtccct 525  Q
    |||||| ||||| |||||||| | ||||| ||||||||||||||||||||    
T  12431155 aataccacttttggtccctgtaatattagcgaattccggttttagtccct 12431106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 527
Target Start/End: Original strand, 26135828 - 26135873
Alignment:
Q  482 tcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||| | ||||| |||||||| |||||||||||||    
T  26135828 tcttttcgtccctgtaatattagcgaattccgattttagtccctgt 26135873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 18462288 - 18462342
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  18462288 gtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 18462342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 527
Target Start/End: Complemental strand, 17606679 - 17606628
Alignment:
Q  476 aatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  17606679 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 17606628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 4906964 - 4907018
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||||||||||  ||||||||||||||    
T  4906964 gtaaatacctcttttcgtccctgtaatattagtgaattctagttttagtccctgt 4907018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 39711448 - 39711394
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| |||||| |||||||||||||||    
T  39711448 gtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccctgt 39711394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 474 - 527
Target Start/End: Original strand, 17606307 - 17606360
Alignment:
Q  474 taaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||||||||||| | ||||| |||||||| |||||||||||||    
T  17606307 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgt 17606360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 473 - 524
Target Start/End: Original strand, 33628692 - 33628743
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccc 524  Q
    |||||||||||||||||||||||| | ||||| |||||| ||||||||||||    
T  33628692 gtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccc 33628743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 476 - 527
Target Start/End: Complemental strand, 33629063 - 33629012
Alignment:
Q  476 aatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||| |||||||| | ||||| ||||||||||||||||||||||    
T  33629063 aatacctctttttgtccctgtaatattagcgaattccggttttagtccctgt 33629012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 18342393 - 18342339
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||| ||||||||||||| | ||||| ||||| ||||||||||||||||    
T  18342393 gtaaataccttttttcgtccctgtaatattagcgaatttcggttttagtccctgt 18342339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 20995700 - 20995754
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||| || |||| | ||||| ||||||||||||||||||||||    
T  20995700 gtaaatacctcttttcatctctgtaatattagcgaattccggttttagtccctgt 20995754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 29696567 - 29696621
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| ||||| ||||||||||| ||||    
T  29696567 gtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtctctgt 29696621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 39826422 - 39826368
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||| ||| | ||||| ||||| ||||||||||||||||    
T  39826422 gtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgt 39826368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 523
Target Start/End: Complemental strand, 48072337 - 48072287
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtcc 523  Q
    |||||||||||||||||||  ||| | ||||||||||||||||||||||||    
T  48072337 gtaaatacctcttttcgtcattgtaatattagtgaattccggttttagtcc 48072287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 606 - 674
Target Start/End: Complemental strand, 29682846 - 29682778
Alignment:
Q  606 taaattgctacattggagtaagggtacatcgtttatgacttatcgaggtttgaaactcatgctagtttc 674  Q
    ||||||| | |||||| |||||| ||| |||||||||| || ||||||||||||||| |||||| ||||    
T  29682846 taaattgatccattggtgtaaggttacttcgtttatgaattctcgaggtttgaaactaatgctaatttc 29682778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 8292806 - 8292860
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||| ||||||||||||||||   ||||| |||| |||||||||||||||||    
T  8292806 gtaaataactcttttcgtccctgtactattagcgaatcccggttttagtccctgt 8292860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 24467631 - 24467685
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||| ||||||||||||||| | ||||| |||||||  |||||||||||||    
T  24467631 gtaaatacatcttttcgtccctgtaatattagcgaattccaattttagtccctgt 24467685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 39711076 - 39711129
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||  ||| | ||||| ||||||||||||||||||||||    
T  39711076 gtaaatacctcttttcgtct-tgtaatattagcgaattccggttttagtccctgt 39711129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 39971022 - 39970968
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||| ||| | ||||  ||||| ||||||||||||||||    
T  39971022 gtaaatacctcttttcgtccatgtaatattaacgaatttcggttttagtccctgt 39970968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 52058384 - 52058330
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | ||||| |||||  ||||||||| |||||    
T  52058384 gtaaatacctcttttcgtccctgtaatattagcgaattttggttttagttcctgt 52058330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 24468000 - 24467949
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||||   | ||| | ||||||||||||||||||||||||||||    
T  24468000 gtaaatacctcttttc---catgtaatattagtgaattccggttttagtccctgt 24467949  T

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Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 473 - 521
Target Start/End: Original strand, 52058013 - 52058061
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagt 521  Q
    |||||||||||||||||||| ||| | ||||  ||||||||||||||||    
T  52058013 gtaaatacctcttttcgtccttgtaatattaacgaattccggttttagt 52058061  T

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Target: scaffold0449 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 7576 - 7522
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||| ||||||||||||| | ||||| ||||||||||||||||||||||    
T  7576 gtaaatacctattttcgtccctgtaatattagcgaattccggttttagtccctgt 7522  T

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Target: scaffold0185 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 3871 - 3925
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||| |||||||||||||||| | ||||| ||||||||||||||||||||||    
T  3871 gtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 3925  T

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Target: scaffold0117 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 525
Target Start/End: Complemental strand, 12355 - 12306
Alignment:
Q  476 aatacctcttttcgtccctgtgacattagtgaattccggttttagtccct 525  Q
    ||||||||||||||||||||| | ||||| ||||||||||||||||||||    
T  12355 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccct 12306  T

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Target: scaffold0141 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 473 - 524
Target Start/End: Original strand, 8327 - 8378
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccc 524  Q
    |||||||||||||||||||||||| | ||||| ||||| |||||||||||||    
T  8327 gtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccc 8378  T

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Target: scaffold0361 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Original strand, 4564 - 4618
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||| ||| | ||||| |||||||| |||||||||||||    
T  4564 gtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgt 4618  T

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Target: scaffold0361; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 4938 - 4884
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    |||||||||||||||||||||||| | |||||  ||||||||||||| |||||||    
T  4938 gtaaatacctcttttcgtccctgtaatattagcaaattccggttttaatccctgt 4884  T

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Target: scaffold0809 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 473 - 525
Target Start/End: Complemental strand, 1782 - 1730
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccct 525  Q
    |||||| ||||||||||||||||| | ||||  ||||||||||||||||||||    
T  1782 gtaaatccctcttttcgtccctgtaatattaacgaattccggttttagtccct 1730  T

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Target: scaffold0352 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 6055 - 6001
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||||||||||| |||||||  | ||||| |||||||| |||||||||||||    
T  6055 gtaaatacctcttttggtccctgcaatattagcgaattccgattttagtccctgt 6001  T

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Target: scaffold0352; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 473 - 525
Target Start/End: Original strand, 4669 - 4721
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccct 525  Q
    ||||||||||||||| |||||||  | ||||| ||||||| ||||||||||||    
T  4669 gtaaatacctcttttagtccctgcaatattagcgaattccagttttagtccct 4721  T

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Target: scaffold0176 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 16004 - 15950
Alignment:
Q  473 gtaaatacctcttttcgtccctgtgacattagtgaattccggttttagtccctgt 527  Q
    ||||||| |||||||||||| ||| | ||||| ||||||||||||||||| ||||    
T  16004 gtaaatatctcttttcgtccatgtaatattagcgaattccggttttagtctctgt 15950  T

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