View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1326R-Insertion-4 (Length: 285)
Name: NF1326R-Insertion-4
Description: NF1326R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1326R-Insertion-4 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 15 - 285
Target Start/End: Original strand, 14325190 - 14325460
Alignment:
| Q |
15 |
ctccatgtggtctctaataatgaaactcaaattaaggatcaataaaataaaattaatctaatccactaatcacttcaagccaaagcaaacactacagtct |
114 |
Q |
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| T |
14325190 |
ctccatgtggtctgtaataatgaaactcaaattaaggatcaataaaaaaaaattaatttaatccactaatcactgcaagccaaagcaaacactacagtat |
14325289 |
T |
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| Q |
115 |
catcctcttttctttatatagta-aaaatcattattcttttagacgtgttagaatgtcattcctcaatcactggctccaatccctagaatcatacattgt |
213 |
Q |
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| T |
14325290 |
catcctcttttctt--tatagtacaaaatcattattcttttagacgtgttagaatgtcattcctcaatcactggctccaatccctagaatcatacattgt |
14325387 |
T |
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| Q |
214 |
ttatatgattcccaaaca-cagatgaattccccctgaccagtgaccactatactattgataacatttgttttg |
285 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14325388 |
ttatatgattcccaaacaccagatgaattccccctgaccagtgaccactatactattgataacatttgttttg |
14325460 |
T |
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