View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1326R-Insertion-5 (Length: 328)
Name: NF1326R-Insertion-5
Description: NF1326R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1326R-Insertion-5 |
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| [»] chr7 (2 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 313; Significance: 1e-176; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 8 - 328
Target Start/End: Complemental strand, 14748525 - 14748205
Alignment:
| Q |
8 |
atatacaggaaaattggtttcaacattggaaagtatatacaggaaaatttgtttcagcattagaggaaatttgtttcaattgtttgctacatttggttat |
107 |
Q |
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| T |
14748525 |
atatacaggaaaattggtttcaacattggaaagtatatacaggaaaatttgtttcaacattagaggaaatttgtttcaattgtttgctacatttggttat |
14748426 |
T |
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| Q |
108 |
ccacatagggtaactgttctctcccgaagacgcatcattcgactgaactctgtcatcaatattttgtatgtcctctctcaatattatttttaatatctat |
207 |
Q |
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| T |
14748425 |
ccacatagggtaactattctctcccgaagacgcatcattcgactgaactctgtcatcaatattttgtatgtcctctctcaatattatttttaatatctat |
14748326 |
T |
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| Q |
208 |
gttaatttccgatactgctgcgattaagtcagttttatgatgcagttatgttttaataattaattagccctctaaactttgtaaaaccatgaatgttttt |
307 |
Q |
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| T |
14748325 |
gttaatttccgatactgctgcgattaagtcagttttatgatgcagttatgttttaataattaattagccctctaaactttgtaaaaccatgaatgttttt |
14748226 |
T |
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| Q |
308 |
cccttctatgcagttatgtgt |
328 |
Q |
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| T |
14748225 |
cccttctatgcagttatgtgt |
14748205 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 14748548 - 14748499
Alignment:
| Q |
19 |
aattggtttcaacattggaaagtatatacaggaaaatttgtttcagcatt |
68 |
Q |
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| T |
14748548 |
aattgttttcaacattagaaagtatatacaggaaaattggtttcaacatt |
14748499 |
T |
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