View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1326_high_3 (Length: 692)

Name: NF1326_high_3
Description: NF1326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1326_high_3
NF1326_high_3
[»] chr4 (5 HSPs)
chr4 (174-515)||(34824110-34824449)
chr4 (566-637)||(34823955-34824023)
chr4 (11-113)||(21261019-21261116)
chr4 (13-113)||(35292730-35292835)
chr4 (447-507)||(34826473-34826533)
[»] chr8 (4 HSPs)
chr8 (195-515)||(28946747-28947067)
chr8 (566-637)||(28946592-28946660)
chr8 (14-55)||(11355524-11355565)
chr8 (15-67)||(34924018-34924070)
[»] chr3 (7 HSPs)
chr3 (174-523)||(42231693-42232025)
chr3 (11-113)||(42028570-42028667)
chr3 (603-663)||(42232049-42232109)
chr3 (13-113)||(39439206-39439311)
chr3 (14-60)||(14568546-14568592)
chr3 (41-122)||(32279173-32279254)
chr3 (41-113)||(24372963-24373035)
[»] chr2 (2 HSPs)
chr2 (11-65)||(28219771-28219825)
chr2 (13-114)||(10354936-10355042)
[»] chr5 (5 HSPs)
chr5 (6-113)||(4944512-4944613)
chr5 (75-121)||(11617987-11618033)
chr5 (11-60)||(21521523-21521572)
chr5 (11-60)||(21532089-21532138)
chr5 (14-55)||(32233763-32233804)
[»] chr1 (5 HSPs)
chr1 (12-60)||(8099763-8099811)
chr1 (12-50)||(8102100-8102138)
chr1 (15-65)||(15582344-15582394)
chr1 (14-55)||(42116481-42116522)
chr1 (14-55)||(49742069-49742110)
[»] scaffold0039 (1 HSPs)
scaffold0039 (15-67)||(57716-57768)
[»] chr7 (1 HSPs)
chr7 (13-65)||(36656799-36656851)


Alignment Details
Target: chr4 (Bit Score: 231; Significance: 1e-127; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 174 - 515
Target Start/End: Complemental strand, 34824449 - 34824110
Alignment:
Q  174 tccaaactcactctctcactatcactaaaatggaagaacaacaagaggctccatctctcacacttcaaatcctcgccggtccacgcaacggcgaaaccca 273  Q
    ||||||||||||| ||| ||  ||||||||||||||||||||||||  | ||  |||| ||||| |||||||||||||||||||||||||| ||||||||    
T  34824449 tccaaactcactcactctct--cactaaaatggaagaacaacaagactcacccactcttacactccaaatcctcgccggtccacgcaacggagaaaccca 34824352  T
Q  274 ccaatttgaacccggatccaccatcaaaatcggtcgggtaatccgcggcaacaacctccccatcaaagatccaggtatttccaccaaacacctcactatc 373  Q
    |||||| ||||| ||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34824351 ccaattcgaacctggatccaccgtcaaaatcggtcgtgtcatccgcggcaacaacctccccatcaaagatccaggtatttccaccaaacacctcactatc 34824252  T
Q  374 catttcgattccggtaattggattctcacagatctcgattcctcaaacggtaccgttttagacaacatacccgttcctccaaataccccttttcatctca 473  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||  ||| |||||||||||||| |||||||||||||    
T  34824251 catttcgattccggtaattggattctcacagatctcgattcctctaacggcaccgttttggacaacgaacctgttcctccaaatactccttttcatctca 34824152  T
Q  474 ccgatgcttccaccattaagatcggtgaagtcacttccatcc 515  Q
     ||||| |||||||||||||||||||||||| ||||||||||    
T  34824151 gcgatggttccaccattaagatcggtgaagttacttccatcc 34824110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 566 - 637
Target Start/End: Complemental strand, 34824023 - 34823955
Alignment:
Q  566 aaaactgttaaatttagggttccggttcagagtagtattcatgaagatggaatgttgaatggtgatgatgaa 637  Q
    |||| ||||||||||||||||||||| |||||||   || ||||||||||||||||||||||||||||||||    
T  34824023 aaaagtgttaaatttagggttccggtacagagta---ttgatgaagatggaatgttgaatggtgatgatgaa 34823955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 11 - 113
Target Start/End: Complemental strand, 21261116 - 21261019
Alignment:
Q  11 ataatatccaaacaatggaatgaaatttttgttccactccattccattccattccatgctgcttcattctgttccgctcctttagttttagattatccaa 110  Q
    |||||||| ||||||||||||| ||| ||||||||||||||||||||||||| ||     ||| ||||| | |||||| | |||||||||| ||||||||    
T  21261116 ataatatcaaaacaatggaatggaatctttgttccactccattccattccatccc-----gctccattccgctccgcttcgttagttttaggttatccaa 21261022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 35292730 - 35292835
Alignment:
Q  13 aatatccaaacaatggaatgaaatttttgttccactccattccattccattcc-----atgctgcttcattctgttccgctcctttagttttagattatc 107  Q
    ||||||||||||||| |||||||||||| |||||  || ||||||||| | ||     || |  || ||||| |||||||||| ||||||||||||||||    
T  35292730 aatatccaaacaatgtaatgaaatttttattccatgccgttccattccgtcccgtcccattccactccattccgttccgctccgttagttttagattatc 35292829  T
Q  108 caaaca 113  Q
    ||||||    
T  35292830 caaaca 35292835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 447 - 507
Target Start/End: Complemental strand, 34826533 - 34826473
Alignment:
Q  447 ttcctccaaataccccttttcatctcaccgatgcttccaccattaagatcggtgaagtcac 507  Q
    |||||||||||||  ||||| |||||   ||||  ||||||||||||||||||||||||||    
T  34826533 ttcctccaaatacttctttttatctccgtgatggatccaccattaagatcggtgaagtcac 34826473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 225; Significance: 1e-123; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 195 - 515
Target Start/End: Complemental strand, 28947067 - 28946747
Alignment:
Q  195 tcactaaaatggaagaacaacaagaggctccatctctcacacttcaaatcctcgccggtccacgcaacggcgaaacccaccaatttgaacccggatccac 294  Q
    |||||||||||||||||||||||||  | ||  |||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  28947067 tcactaaaatggaagaacaacaagacccacccactctcacactccaaatcctcgccggtccacgcaacggagaaacccaccaattcgaacctggatccac 28946968  T
Q  295 catcaaaatcggtcgggtaatccgcggcaacaacctccccatcaaagatccaggtatttccaccaaacacctcactatccatttcgattccggtaattgg 394  Q
    | ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28946967 cgtcaaaatcggtcgtgtcatccgcggcaacaacctccccatcaaagatccaggtatttccaccaaacacctcactatccatttcgattccggtaattgg 28946868  T
Q  395 attctcacagatctcgattcctcaaacggtaccgttttagacaacatacccgttcctccaaataccccttttcatctcaccgatgcttccaccattaaga 494  Q
    ||||||||||||||||||||||| ||||| |||||||| ||||||  ||| |||||||| ||||| ||||||||||||  ||||| ||||||||||||||    
T  28946867 attctcacagatctcgattcctctaacggcaccgttttggacaacgaacctgttcctccgaatactccttttcatctctgcgatggttccaccattaaga 28946768  T
Q  495 tcggtgaagtcacttccatcc 515  Q
    |||||||||| ||||||||||    
T  28946767 tcggtgaagttacttccatcc 28946747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 566 - 637
Target Start/End: Complemental strand, 28946660 - 28946592
Alignment:
Q  566 aaaactgttaaatttagggttccggttcagagtagtattcatgaagatggaatgttgaatggtgatgatgaa 637  Q
    |||| ||||||||||||||||||||| |||||||   || ||||||||||||||||||||||||||||||||    
T  28946660 aaaagtgttaaatttagggttccggtacagagta---ttgatgaagatggaatgttgaatggtgatgatgaa 28946592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 11355524 - 11355565
Alignment:
Q  14 atatccaaacaatggaatgaaatttttgttccactccattcc 55  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||    
T  11355524 atatccaaacaatggaatggaatctttgttccattccattcc 11355565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 34924070 - 34924018
Alignment:
Q  15 tatccaaacaatggaatgaaatttttgttccactccattccattccattccat 67  Q
    |||||||||||||||||||||| ||| ||||| || ||||  |||||||||||    
T  34924070 tatccaaacaatggaatgaaatctttattccattcaattctgttccattccat 34924018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 221; Significance: 1e-121; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 174 - 523
Target Start/End: Original strand, 42231693 - 42232025
Alignment:
Q  174 tccaaactcactctctcactatcactaaaatggaagaacaacaagaggctccatctctcacacttcaaatcctcgccggtccacgcaacggcgaaaccca 273  Q
    |||||||||||||||||||||||| ||||||||||||||||||||          |||||||||| ||||||||||          ||||||||||||||    
T  42231693 tccaaactcactctctcactatcagtaaaatggaagaacaacaag----------tctcacacttgaaatcctcgc----------aacggcgaaaccca 42231772  T
Q  274 ccaatttgaacccggatccaccatcaaaatcggtcgggtaatccgcggcaacaacctccccatcaaagatccaggtatttccaccaaacacctcactatc 373  Q
    |||||| ||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42231773 ccaattcgaacctggatccaccatcaaaatcggtcgggtcatacgcggcaacaacctccccatcaaagatccaggtatttccaccaaacacctcactatc 42231872  T
Q  374 catttcgattc---cggtaattggattctcacagatctcgattcctcaaacggtaccgttttagacaacatacccgttcctccaaataccccttttcatc 470  Q
    |||||||||||   | ||||||||||||||||| ||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||    
T  42231873 catttcgattcgtcctgtaattggattctcacatatctcgattcctcaaacggcaccgttttagataacaaacccgttcctccaaataccccttttcatc 42231972  T
Q  471 tcaccgatgcttccaccattaagatcggtgaagtcacttccatccgagtcaat 523  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  42231973 tcacctatgcttccaccattaagatcggtgaagtcacttccatccgagtcaat 42232025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 11 - 113
Target Start/End: Complemental strand, 42028667 - 42028570
Alignment:
Q  11 ataatatccaaacaatggaatgaaatttttgttccactccattccattccattccatgctgcttcattctgttccgctcctttagttttagattatccaa 110  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||     ||| ||||| |||||||||| |||||||||| ||||||||    
T  42028667 ataatatccaaacaatggaatgaaatctttgttccactccattccattccattcc-----gctccattcggttccgctccgttagttttaggttatccaa 42028573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 603 - 663
Target Start/End: Original strand, 42232049 - 42232109
Alignment:
Q  603 ttcatgaagatggaatgttgaatggtgatgatgaatctggtgtaattgtagatcgacctca 663  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  42232049 ttcatgaagatggaatgttgaatggtgattatgaatctggtggaattgtagatcgacctca 42232109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 13 - 113
Target Start/End: Complemental strand, 39439311 - 39439206
Alignment:
Q  13 aatatccaaacaatggaatgaaatttttgttcca-----ctccattccattccattccatgctgcttcattctgttccgctcctttagttttagattatc 107  Q
    |||||||||||||||||||||||||||| |||||      ||||||| || || | |||| | ||| |||||  ||||||||| ||||||||||||||||    
T  39439311 aatatccaaacaatggaatgaaatttttattccatgtcgttccattctatcccgtcccattccgctccattccattccgctccgttagttttagattatc 39439212  T
Q  108 caaaca 113  Q
    ||||||    
T  39439211 caaaca 39439206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 14568546 - 14568592
Alignment:
Q  14 atatccaaacaatggaatgaaatttttgttccactccattccattcc 60  Q
    ||||||||||||||||||  ||| ||||||||| |||||||||||||    
T  14568546 atatccaaacaatggaattgaatctttgttccattccattccattcc 14568592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 122
Target Start/End: Original strand, 32279173 - 32279254
Alignment:
Q  41 gttccactccattccattccattccatgctgcttcattctgttccgctcctttagttttagattatccaaacaaagtcttaa 122  Q
    |||||| ||||||||||||| |||||  | ||| ||||| |||||||||| ||||||| |  ||||||||||| || |||||    
T  32279173 gttccattccattccattccgttccactccgctccattccgttccgctccgttagtttcatgttatccaaacagagccttaa 32279254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 24373035 - 24372963
Alignment:
Q  41 gttccactccattccattccattccatgctgcttcattctgttccgctcctttagttttagattatccaaaca 113  Q
    ||||| ||||||||||||||||||||| | ||| |||||  |||| |||| |||||||||  ||||| |||||    
T  24373035 gttccgctccattccattccattccattccgctccattccattccactccgttagttttaagttatcgaaaca 24372963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 7e-20; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 28219771 - 28219825
Alignment:
Q  11 ataatatccaaacaatggaatgaaatttttgttccactccattccattccattcc 65  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  28219771 ataatatccaaacaatggaatgaaatctttgttccactccattccattccattcc 28219825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 10354936 - 10355042
Alignment:
Q  13 aatatccaaacaatggaatgaaatttttgttcca-----ctccattccattccattccatgctgcttcattctgttccgctcctttagttttagattatc 107  Q
    |||||||||||||||||||||||||||| |||||      |||||||| | ||||  ||| |  || ||||| |||||| ||| ||||||||||||||||    
T  10354936 aatatccaaacaatggaatgaaatttttattccatgacgttccattccgtcccatctcattccactccattccgttccgatccgttagttttagattatc 10355035  T
Q  108 caaacaa 114  Q
    |||||||    
T  10355036 caaacaa 10355042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 4e-18; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 4944512 - 4944613
Alignment:
Q  6 gtcgaataatatccaaacaatggaatgaaatttttgttccactccattccattccattccatgctgcttcattctgttccgctcctttagttttagatta 105  Q
    |||| |||||||||||||||||||||| ||| ||||||||||||| ||||||| ||||||  ||    |||||| |||||||||| |||||||||| |||    
T  4944512 gtcgtataatatccaaacaatggaatggaatctttgttccactccgttccatttcattcc--gc----tcattccgttccgctccgttagttttaggtta 4944605  T
Q  106 tccaaaca 113  Q
    ||||||||    
T  4944606 tccaaaca 4944613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 121
Target Start/End: Original strand, 11617987 - 11618033
Alignment:
Q  75 cattctgttccgctcctttagttttagattatccaaacaaagtctta 121  Q
    ||||||||| |||||| ||||||||||||||||||||||||| ||||    
T  11617987 cattctgtttcgctccgttagttttagattatccaaacaaagcctta 11618033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 21521523 - 21521572
Alignment:
Q  11 ataatatccaaacaatggaatgaaatttttgttccactccattccattcc 60  Q
    |||||||||||||||||||||||||| ||| ||||| ||| |||| ||||    
T  21521523 ataatatccaaacaatggaatgaaatatttattccattccgttccgttcc 21521572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 21532089 - 21532138
Alignment:
Q  11 ataatatccaaacaatggaatgaaatttttgttccactccattccattcc 60  Q
    |||||||||||||||||||||||||| ||| ||||| ||| |||| ||||    
T  21532089 ataatatccaaacaatggaatgaaatatttattccattccgttccgttcc 21532138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 32233763 - 32233804
Alignment:
Q  14 atatccaaacaatggaatgaaatttttgttccactccattcc 55  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||    
T  32233763 atatccaaacaatggaatggaatctttgttccattccattcc 32233804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000002; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 8099763 - 8099811
Alignment:
Q  12 taatatccaaacaatggaatgaaatttttgttccactccattccattcc 60  Q
    ||||||||||||||||||||||||| ||||||||||||| |||| ||||    
T  8099763 taatatccaaacaatggaatgaaatctttgttccactccgttccgttcc 8099811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 12 - 50
Target Start/End: Complemental strand, 8102138 - 8102100
Alignment:
Q  12 taatatccaaacaatggaatgaaatttttgttccactcc 50  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  8102138 taatattcaaacaatggaatgaaatctttgttccactcc 8102100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 15582344 - 15582394
Alignment:
Q  15 tatccaaacaatggaatgaaatttttgttccactccattccattccattcc 65  Q
    |||||||||||||||||| ||||||| ||||  ||||||||||||| ||||    
T  15582344 tatccaaacaatggaatggaatttttattccgttccattccattcccttcc 15582394  T

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Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 42116522 - 42116481
Alignment:
Q  14 atatccaaacaatggaatgaaatttttgttccactccattcc 55  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||    
T  42116522 atatccaaacaatggaatggaatctttgttccattccattcc 42116481  T

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Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 49742069 - 49742110
Alignment:
Q  14 atatccaaacaatggaatgaaatttttgttccactccattcc 55  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||    
T  49742069 atatccaaacaatggaatggaatctttgttccattccattcc 49742110  T

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Target: scaffold0039 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 57716 - 57768
Alignment:
Q  15 tatccaaacaatggaatgaaatttttgttccactccattccattccattccat 67  Q
    |||||||||||||||||||||| ||| ||||| || ||||| |||||||||||    
T  57716 tatccaaacaatggaatgaaatctttattccattcaattccgttccattccat 57768  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 36656851 - 36656799
Alignment:
Q  13 aatatccaaacaatggaatgaaatttttgttccactccattccattccattcc 65  Q
    ||||||||| |||||||||| ||||||||||||| |||||||| || ||||||    
T  36656851 aatatccaagcaatggaatgtaatttttgttccattccattccgttacattcc 36656799  T

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