View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1326_low_32 (Length: 264)
Name: NF1326_low_32
Description: NF1326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1326_low_32 |
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Alignment Details
Target: chr5 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 13867625 - 13867392
Alignment:
| Q |
1 |
tctttttgggaaacggatgtatggagaagaaaaaa-tgagaacgaggacagttatgtttttatttataatgcccttcttacattcactcatttccgatat |
99 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13867625 |
tctttttgggaaacggatgtatggagaagaaaaaaatgagaacgaggacagttatgcttttatttataatgcccttcttacattcactcatttccgatat |
13867526 |
T |
|
| Q |
100 |
cgnnnnnnnnnnnaattttatttgttaaattactaattaaagaaatagaaatcaaaatcgagatatatgactaattaaagagatataataagaaaggagt |
199 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
13867525 |
cgttttttttt--aattttatttgttaaattactaattaaagaaatagaaatcaaaatcgagatatatgacttattaaagagatataataagaaaggagt |
13867428 |
T |
|
| Q |
200 |
gatggttgaaatttggacaaaacttactattacagg |
235 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
13867427 |
gatggttgaaatttggacaaaacttactattacagg |
13867392 |
T |
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