View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13270_high_9 (Length: 435)

Name: NF13270_high_9
Description: NF13270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13270_high_9
NF13270_high_9
[»] chr2 (12 HSPs)
chr2 (15-419)||(8378905-8379309)
chr2 (15-391)||(30395577-30395953)
chr2 (15-221)||(30476520-30476726)
chr2 (15-274)||(30384942-30385201)
chr2 (15-222)||(23783261-23783468)
chr2 (15-252)||(30484667-30484904)
chr2 (15-222)||(23768614-23768821)
chr2 (23-266)||(30425235-30425478)
chr2 (15-274)||(30431260-30431519)
chr2 (23-266)||(30469334-30469577)
chr2 (15-221)||(30437568-30437774)
chr2 (330-386)||(30484533-30484589)
[»] chr5 (1 HSPs)
chr5 (15-271)||(41626754-41627010)
[»] chr8 (4 HSPs)
chr8 (23-223)||(15858459-15858659)
chr8 (70-223)||(15865574-15865727)
chr8 (25-218)||(15844326-15844519)
chr8 (70-218)||(15851606-15851754)


Alignment Details
Target: chr2 (Bit Score: 389; Significance: 0; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 15 - 419
Target Start/End: Original strand, 8378905 - 8379309
Alignment:
Q  15 agcataggttggagaaagttcaaaatagaaattttgtaaaatcattgacactgccatctttgcttccaatagggaaaaattttgtcccatgcaaactcta 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  8378905 agcataggttggagaaagttcaaaatagaaattttgtaaaatcattgacactgccatctttgcttccaatagggaaaagttttgtcccatgcaaactcta 8379004  T
Q  115 ggaccccctccaaatgggaaatatataaatctaccatttgttgctttggaaattccttcagcaaatctctcaggattgaacatctttgcatcatcacccc 214  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8379005 ggaccccctccaaatggaaaatatataaatctaccatttgttgctttggaaattccttcagcaaatctctcaggattgaacatctttgcatcatcacccc 8379104  T
Q  215 atagttcattgttatgttgaagcaaaataattggtaagaaaacttccactccagcaggtacttccatgtttccaaactttatgtctttgccaacatatcg 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8379105 atagttcattgttatgttgaagcaaaataattggtaagaaaacttccactccagcaggtacttccatgtttccaaactttatgtctttgccaacatatcg 8379204  T
Q  315 agtaacaccaaatgctggtggatacaaccttagaacctcatacaaaatcatagggagctgtcacaataagatatatgctatcaataagtgagtccaataa 414  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  8379205 agtaacaccaaatgctggtggatacaaccttagaacctcatacaaaatcatagggagctgtcacaaaaagatttatgctatcaataagtgagtccaataa 8379304  T
Q  415 agttt 419  Q
    |||||    
T  8379305 agttt 8379309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 15 - 391
Target Start/End: Complemental strand, 30395953 - 30395577
Alignment:
Q  15 agcataggttggagaaagttcaaaatagaaattttgtaaaatcattgacactgccatctttgcttccaatagggaaaaattttgtcccatgcaaactcta 114  Q
    |||||||||||  |||||||||||  | |||| ||| ||||||||||||| ||||||||||||||||| ||||||||| |||||||| ||||||| |||     
T  30395953 agcataggttgaggaaagttcaaatgaaaaatgttgcaaaatcattgacaatgccatctttgcttccattagggaaaagttttgtccaatgcaaattctt 30395854  T
Q  115 ggaccccctccaaatgggaaatatataaatctaccatttgttgctttggaaattccttcagcaaatctctcaggattgaacatctttgcatcatcacccc 214  Q
    ||||||| ||||||||| ||| ||  || |||||||||||||||||| ||||||||| | | ||||||||||||||||||||| || |||||||| ||||    
T  30395853 ggaccccatccaaatggaaaaaatgaaactctaccatttgttgctttagaaattcctccggaaaatctctcaggattgaacattttagcatcatcgcccc 30395754  T
Q  215 atagttcattgttatgttgaagcaaaataattggtaagaaaacttccactccagcaggtacttccatgtttccaaactttatgtctttgccaacatatcg 314  Q
    ||||||    || ||| |||| ||||| ||||||||||||||| |||||||||||||||| |  || ||||||||  || || |||||  |||||| ||     
T  30395753 atagtttgcagtcatgatgaatcaaaagaattggtaagaaaacctccactccagcaggtaatgtcaggtttccaagtttcatatctttcacaacatttct 30395654  T
Q  315 agtaacaccaaatgctggtggatacaaccttagaacctcatacaaaatcatagggagctgtcacaataagatatatg 391  Q
    || ||  || | | |||| || || || || |||||||||||||||||||| | || |||| |||| ||||| ||||    
T  30395653 agcaagtcccattactggagggtataatctaagaacctcatacaaaatcatggtgacctgttacaaaaagatttatg 30395577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 30476726 - 30476520
Alignment:
Q  15 agcataggttggagaaagttcaaaatagaaattttgtaaaatcattgacactgccatctttgcttccaatagggaaaaattttgtcccatgcaaactcta 114  Q
    |||||| | |||||||||||||||  |||| |||| ||||||||||| || |||||||||||||||||| | ||||||||||||||| ||||||| |||     
T  30476726 agcataagatggagaaagttcaaatgagaatttttttaaaatcattgccattgccatctttgcttccaacatggaaaaattttgtccaatgcaaattctt 30476627  T
Q  115 ggaccccctccaaatgggaaatatataaatctaccatttgttgctttggaaattccttcagcaaatctctcaggattgaacatctttgcatcatcacccc 214  Q
    ||||||||||||||||| ||| ||  |||||| |||||||||||||||||||||||| ||| |||||||||||||||||||| ||| ||||| |||||||    
T  30476626 ggaccccctccaaatggaaaaaatgaaaatctcccatttgttgctttggaaattcctccagaaaatctctcaggattgaacaccttagcatcttcacccc 30476527  T
Q  215 atagttc 221  Q
    |||||||    
T  30476526 atagttc 30476520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 15 - 274
Target Start/End: Complemental strand, 30385201 - 30384942
Alignment:
Q  15 agcataggttggagaaagttcaaaatagaaattttgtaaaatcattgacactgccatctttgcttccaatagggaaaaattttgtcccatgcaaactcta 114  Q
    ||||||||| || |||||||||||  |||||| ||| ||||||| || || |||||| |||||||||| ||| ||||| |||||||| ||||||| || |    
T  30385201 agcataggtcggtgaaagttcaaatgagaaatgttgcaaaatcaatgtcattgccatttttgcttccattagagaaaagttttgtccaatgcaaattcga 30385102  T
Q  115 ggaccccctccaaatgggaaatatataaatctaccatttgttgctttggaaattccttcagcaaatctctcaggattgaacatctttgcatcatcacccc 214  Q
    ||||||| ||||||||| ||| ||  || ||| |||||||||||||||||||||||| ||  |||||| |||||||||||||| || |||||||||||||    
T  30385101 ggaccccatccaaatggaaaaaatgaaactcttccatttgttgctttggaaattcctccaaaaaatctttcaggattgaacattttagcatcatcacccc 30385002  T
Q  215 atagttcattgttatgttgaagcaaaataattggtaagaaaacttccactccagcaggta 274  Q
    |||||||   || ||| |||| ||||| ||||||||||||||  ||||||||||||||||    
T  30385001 atagttcgcagtcatggtgaatcaaaagaattggtaagaaaatctccactccagcaggta 30384942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 15 - 222
Target Start/End: Original strand, 23783261 - 23783468
Alignment:
Q  15 agcataggttggagaaagttcaaaatagaaattttgtaaaatcattgacactgccatctttgcttccaatagggaaaaattttgtcccatgcaaactcta 114  Q
    |||||| ||| |||||||||||||  | ||||| | |||||||| || || |||||||||||||||||| |||||||| |||||||| ||||| | ||||    
T  23783261 agcatatgtttgagaaagttcaaatgaaaaattctttaaaatcaatgccattgccatctttgcttccaacagggaaaagttttgtccaatgcagattcta 23783360  T
Q  115 ggaccccctccaaatgggaaatatataaatctaccatttgttgctttggaaattccttcagcaaatctctcaggattgaacatctttgcatcatcacccc 214  Q
    |||||| ||||||| || ||||||  ||||||||| ||||||||||||||||||||  ||| |||||||||||||||||| ||||| |||||||||||||    
T  23783361 ggacccgctccaaacggaaaatatgaaaatctaccgtttgttgctttggaaattccaccagaaaatctctcaggattgaaaatcttagcatcatcacccc 23783460  T
Q  215 atagttca 222  Q
    ||||||||    
T  23783461 atagttca 23783468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 15 - 252
Target Start/End: Complemental strand, 30484904 - 30484667
Alignment:
Q  15 agcataggttggagaaagttcaaaatagaaattttgtaaaatcattgacactgccatctttgcttccaatagggaaaaattttgtcccatgcaaactcta 114  Q
    ||||||||||||||||||||||||  ||||||  || ||||||| ||  | |||||||||||||||||| | |||||| |||||||| || |||| ||||    
T  30484904 agcataggttggagaaagttcaaatgagaaatgctgcaaaatcaatgttattgccatctttgcttccaacatggaaaagttttgtccaatacaaattcta 30484805  T
Q  115 ggaccccctccaaatgggaaatatataaatctaccatttgttgctttggaaattccttcagcaaatctctcaggattgaacatctttgcatcatcacccc 214  Q
    ||||||||||||||||| ||| ||  |  |||||||||||||||||| |||| |||||| |||||||||||||||||||||| ||| ||||| |||||||    
T  30484804 ggaccccctccaaatggaaaaaatgaatttctaccatttgttgcttttgaaactccttctgcaaatctctcaggattgaacaccttagcatcttcacccc 30484705  T
Q  215 atagttcattgttatgttgaagcaaaataattggtaag 252  Q
    ||||||||| ||| || |||| | |||  |||||||||    
T  30484704 atagttcatggttgtggtgaatccaaactattggtaag 30484667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 15 - 222
Target Start/End: Complemental strand, 23768821 - 23768614
Alignment:
Q  15 agcataggttggagaaagttcaaaatagaaattttgtaaaatcattgacactgccatctttgcttccaatagggaaaaattttgtcccatgcaaactcta 114  Q
    |||||| ||| |||||||||||||  | ||||| |||||||||| || || ||||||||||||||||||||| |||||  | ||||| ||||| | ||||    
T  23768821 agcatatgtttgagaaagttcaaatgaaaaattctgtaaaatcaatgccattgccatctttgcttccaatagagaaaaggtctgtccaatgcagattcta 23768722  T
Q  115 ggaccccctccaaatgggaaatatataaatctaccatttgttgctttggaaattccttcagcaaatctctcaggattgaacatctttgcatcatcacccc 214  Q
    |||||  ||||||| || ||||||  ||||||||| ||||||||||||||||||||  ||| |||||||||||||||||| ||||| |||||||||||||    
T  23768721 ggacctgctccaaacggaaaatatgaaaatctaccgtttgttgctttggaaattccaccagaaaatctctcaggattgaaaatcttagcatcatcacccc 23768622  T
Q  215 atagttca 222  Q
    ||||||||    
T  23768621 atagttca 23768614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 23 - 266
Target Start/End: Complemental strand, 30425478 - 30425235
Alignment:
Q  23 ttggagaaagttcaaaatagaaattttgtaaaatcattgacactgccatctttgcttccaatagggaaaaattttgtcccatgcaaactctaggaccccc 122  Q
    ||||||||||||| || | ||||  ||||||||||||||  | |||||||||||||||||| |  ||||| |||||||| ||||||| ||||||||||||    
T  30425478 ttggagaaagttcgaagtcgaaacgttgtaaaatcattgctattgccatctttgcttccaacatagaaaagttttgtccaatgcaaattctaggaccccc 30425379  T
Q  123 tccaaatgggaaatatataaatctaccatttgttgctttggaaattccttcagcaaatctctcaggattgaacatctttgcatcatcaccccatagttca 222  Q
    ||||||||| ||| ||  |  ||| ||||||||||||||  |||  ||||| | ||||||||| |||||||||| ||| ||||||||||||||||||||     
T  30425378 tccaaatggaaaaaatgaatttcttccatttgttgcttttaaaacaccttctgaaaatctctcgggattgaacaccttagcatcatcaccccatagttct 30425279  T
Q  223 ttgttatgttgaagcaaaataattggtaagaaaacttccactcc 266  Q
     ||| ||| |||| |||||| || | ||||||||| | ||||||    
T  30425278 atgtcatggtgaaccaaaattatcgataagaaaacctgcactcc 30425235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 274
Target Start/End: Complemental strand, 30431519 - 30431260
Alignment:
Q  15 agcataggttggagaaagttcaaaatagaaattttgtaaaatcattgacactgccatctttgcttccaatagggaaaaattttgtcccatgcaaactcta 114  Q
    |||||| | |||||||||||||||  |||||  ||||||||||||||  | |||||||||||||||||| | |||||| |||||||| || |||| ||||    
T  30431519 agcataagatggagaaagttcaaatgagaaacgttgtaaaatcattgctattgccatctttgcttccaacatggaaaagttttgtccaattcaaattcta 30431420  T
Q  115 ggaccccctccaaatgggaaatatataaatctaccatttgttgctttggaaattccttcagcaaatctctcaggattgaacatctttgcatcatcacccc 214  Q
    ||||||||| ||||||| | | ||  |  ||| ||||||||||||||  |||  ||||| | ||||||||| |||||||||| ||| ||||| |||||||    
T  30431419 ggacccccttcaaatggaataaatgaatttcttccatttgttgcttttaaaacaccttctgaaaatctctcgggattgaacaccttagcatcttcacccc 30431320  T
Q  215 atagttcattgttatgttgaagcaaaataattggtaagaaaacttccactccagcaggta 274  Q
    |||||||  ||| ||| |||| |||||| || | ||||||||| | |||||| |||||||    
T  30431319 atagttctatgtcatggtgaaccaaaattatcgataagaaaacctgcactcctgcaggta 30431260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 23 - 266
Target Start/End: Complemental strand, 30469577 - 30469334
Alignment:
Q  23 ttggagaaagttcaaaatagaaattttgtaaaatcattgacactgccatctttgcttccaatagggaaaaattttgtcccatgcaaactctaggaccccc 122  Q
    ||||||||||||||||  |||||  ||||||||||||||  | |||||||||||||||||| | |||||| || ||||| ||||||| ||||||||||||    
T  30469577 ttggagaaagttcaaatgagaaacgttgtaaaatcattgctattgccatctttgcttccaacatggaaaagttctgtccaatgcaaattctaggaccccc 30469478  T
Q  123 tccaaatgggaaatatataaatctaccatttgttgctttggaaattccttcagcaaatctctcaggattgaacatctttgcatcatcaccccatagttca 222  Q
    | ||||||| ||| ||  |  ||| ||||| ||||||||  |||  ||||||| ||||||||| |||||||||| ||| ||||| ||||||||||||||     
T  30469477 tgcaaatggaaaaaatgaatttcttccattggttgcttttaaaacaccttcagaaaatctctcgggattgaacaccttagcatcttcaccccatagttct 30469378  T
Q  223 ttgttatgttgaagcaaaataattggtaagaaaacttccactcc 266  Q
     ||| ||| |||| || ||| || | ||||||||| | ||||||    
T  30469377 atgtcatggtgaaccataattatcgataagaaaacctgcactcc 30469334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 30437774 - 30437568
Alignment:
Q  15 agcataggttggagaaagttcaaaatagaaattttgtaaaatcattgacactgccatctttgcttccaatagggaaaaattttgtcccatgcaaactcta 114  Q
    |||||| | |||||||||||| ||  |||||  ||||||||||||||  |  ||||||||||||||||| |  ||||| || ||||| ||||||| ||||    
T  30437774 agcataagatggagaaagttcgaatgagaaacgttgtaaaatcattgctatcgccatctttgcttccaacatagaaaagttctgtccaatgcaaattcta 30437675  T
Q  115 ggaccccctccaaatgggaaatatataaatctaccatttgttgctttggaaattccttcagcaaatctctcaggattgaacatctttgcatcatcacccc 214  Q
    ||||||||||||||||| | | ||  |  ||| ||||||||||||||  |||  ||||||| |||||||||||||||||||| ||| ||||| |||||||    
T  30437674 ggaccccctccaaatggaacaaatgaatttcttccatttgttgctttcaaaacaccttcagaaaatctctcaggattgaacaccttagcatcgtcacccc 30437575  T
Q  215 atagttc 221  Q
    |||||||    
T  30437574 atagttc 30437568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 386
Target Start/End: Complemental strand, 30484589 - 30484533
Alignment:
Q  330 tggtggatacaaccttagaacctcatacaaaatcatagggagctgtcacaataagat 386  Q
    |||||| || |||||||||||||||||||||||||| |  | ||||||||| |||||    
T  30484589 tggtgggtataaccttagaacctcatacaaaatcatggtcatctgtcacaaaaagat 30484533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 4e-45; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 15 - 271
Target Start/End: Original strand, 41626754 - 41627010
Alignment:
Q  15 agcataggttggagaaagttcaaaatagaaattttgtaaaatcattgacactgccatctttgcttccaatagggaaaaattttgtcccatgcaaactcta 114  Q
    |||||||| ||||||||||| |||  ||||||  |||||||||| || || ||||||||||||||||||||| ||||| ||||| || ||||| |  |||    
T  41626754 agcataggctggagaaagttgaaatgagaaatgctgtaaaatcaatgtcattgccatctttgcttccaatagagaaaagttttgcccaatgcagatccta 41626853  T
Q  115 ggaccccctccaaatgggaaatatataaatctaccatttgttgctttggaaattccttcagcaaatctctcaggattgaacatctttgcatcatcacccc 214  Q
    ||||||| ||||||||| ||| ||  || |||||| || |||||||||||||||||| ||| |||||| |||||||||||||| || |||||||||||||    
T  41626854 ggaccccatccaaatggaaaaaatgaaactctaccgttcgttgctttggaaattcctccagaaaatctttcaggattgaacattttagcatcatcacccc 41626953  T
Q  215 atagttcattgttatgttgaagcaaaataattggtaagaaaacttccactccagcag 271  Q
    ||| ||||   | ||| || | ||| |||||||| | |||||| |||||||||||||    
T  41626954 ataattcacaatcatggtgcaacaatataattggcatgaaaacctccactccagcag 41627010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 7e-19; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 23 - 223
Target Start/End: Original strand, 15858459 - 15858659
Alignment:
Q  23 ttggagaaagttcaaaatagaaattttgtaaaatcattgacactgccatctttgcttccaatagggaaaaattttgtcccatgcaaactctaggaccccc 122  Q
    ||||||||||||| ||  ||||||| || |  | || ||| ||||| ||||||||||| |||| || ||| |||||||| |  |||| |||||||||||     
T  15858459 ttggagaaagttcgaatgagaaattctgcagcaacaatgatactgctatctttgcttctaataaggcaaagttttgtccaagacaaattctaggacccca 15858558  T
Q  123 tccaaatgggaaatatataaatctaccatttgttgctttggaaattccttcagcaaatctctcaggattgaacatctttgcatcatcaccccatagttca 222  Q
    |||||| ||||||||   || |   || |||||||| || | ||||||||||||||| || ||||| ||||||  ||||||||||||||||||||| |||    
T  15858559 tccaaaagggaaataagaaacttgtccttttgttgccttcgcaattccttcagcaaacctttcaggtttgaactcctttgcatcatcaccccatagatca 15858658  T
Q  223 t 223  Q
    |    
T  15858659 t 15858659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 70 - 223
Target Start/End: Original strand, 15865574 - 15865727
Alignment:
Q  70 atctttgcttccaatagggaaaaattttgtcccatgcaaactctaggaccccctccaaatgggaaatatataaatctaccatttgttgctttggaaattc 169  Q
    ||||||||||| | || || ||| |||||||| |  |||| ||||||||||| |||||| ||||||||   || | | || ||||| || || | |||||    
T  15865574 atctttgcttctagtaaggcaaagttttgtccaagacaaattctaggaccccatccaaaagggaaataagaaacttttccttttgtagcctttgcaattc 15865673  T
Q  170 cttcagcaaatctctcaggattgaacatctttgcatcatcaccccatagttcat 223  Q
    |||||||||| || ||||| ||||||  ||||||||||||||||||||| ||||    
T  15865674 cttcagcaaacctttcaggtttgaactcctttgcatcatcaccccatagatcat 15865727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 218
Target Start/End: Original strand, 15844326 - 15844519
Alignment:
Q  25 ggagaaagttcaaaatagaaattttgtaaaatcattgacactgccatctttgcttccaatagggaaaaattttgtcccatgcaaactctaggaccccctc 124  Q
    ||||||||||||||  ||||||| || |  | || ||| | ||| ||||||||||| |||| || ||| |||||||| |  |||| ||||||||||| ||    
T  15844326 ggagaaagttcaaatgagaaattctgcagcaacaatgatattgctatctttgcttctaataaggtaaagttttgtccaagacaaattctaggaccccatc 15844425  T
Q  125 caaatgggaaatatataaatctaccatttgttgctttggaaattccttcagcaaatctctcaggattgaacatctttgcatcatcaccccatag 218  Q
    |||| ||||||||   || |   || |||||||| || | ||||||||||||||| || || || ||||||  |||||||||||| ||||||||    
T  15844426 caaaggggaaataagaaacttgtccttttgttgccttcgcaattccttcagcaaacctttcgggtttgaactcctttgcatcatccccccatag 15844519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 218
Target Start/End: Original strand, 15851606 - 15851754
Alignment:
Q  70 atctttgcttccaatagggaaaaattttgtcccatgcaaactctaggaccccctccaaatgggaaatatataaatctaccatttgttgctttggaaattc 169  Q
    ||||||||||| |||| || ||| |||||||| |  |||| ||||||||||| |||||| |||| |||   || |   || ||||| || || | |||||    
T  15851606 atctttgcttctaataaggcaaagttttgtccaagacaaattctaggaccccatccaaaagggatatacgaaacttggccttttgtggcctttgcaattc 15851705  T
Q  170 cttcagcaaatctctcaggattgaacatctttgcatcatcaccccatag 218  Q
    |||||| ||| |  |||||||||||| ||||||||||||||||||||||    
T  15851706 cttcagaaaaccgttcaggattgaacttctttgcatcatcaccccatag 15851754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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