View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13271_low_17 (Length: 240)
Name: NF13271_low_17
Description: NF13271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13271_low_17 |
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Alignment Details
Target: chr1 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 9 - 218
Target Start/End: Original strand, 36376837 - 36377046
Alignment:
| Q |
9 |
ataaccattaatatacatatataaggtagctaactactaaggtagcaactagttgttattcttttgattaagcctagctgcggctgccattgatgcagac |
108 |
Q |
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| T |
36376837 |
ataaccattaatatacatatataaggtagctaactacttaggtagcaactagttgttattcttttggttaagcctagctgcggctgccattgatgctgac |
36376936 |
T |
|
| Q |
109 |
actcctccaggatgagtagtgagatatggatcatttctcatttctgcacccgtcaccccttcagcgtctctccttgtcgctgctctatctgccggtaact |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |
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| T |
36376937 |
actcctccaggatgagtagtgagatatggatcatttctcatttctgcacccgtcaccccttcggcatctctccttgtcgctgctctatctgccggtaact |
36377036 |
T |
|
| Q |
209 |
ttgtagtcgc |
218 |
Q |
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|||||||||| |
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| T |
36377037 |
ttgtagtcgc |
36377046 |
T |
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