View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13271_low_8 (Length: 397)
Name: NF13271_low_8
Description: NF13271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13271_low_8 |
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Alignment Details
Target: chr1 (Bit Score: 358; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 21 - 390
Target Start/End: Complemental strand, 32460535 - 32460166
Alignment:
| Q |
21 |
attgggtttgttggtgaaacaacgacgccaatggagagcaatgcgaagtagaggattggaacctgaacgaggtttggggaaagaatgaatgcggtgtggt |
120 |
Q |
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| T |
32460535 |
attgggtttgttggtgaaacaacgacgccaatggagagcaatgcgaagtagaggattggaacctgaacgaggtttggggaaagaatgaatgaggtgtggt |
32460436 |
T |
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| Q |
121 |
gtttggtgagtccgcggagagtgaggtttttcgcgagggttttgtagcgttggatgaaggtggagtaagagagtttgtgagatgttgttgagtcgacgag |
220 |
Q |
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| T |
32460435 |
gtttggtgagtccgcggagagtgaggtttttcgcgagggttttgtagcgttggatgaaggtggagtaagagagtttgtgagatgttgttgagtcgatgag |
32460336 |
T |
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| Q |
221 |
gagagtgtttgagtcggagttgaagtcggagtggtggagggagaaggtgtatgttgcggcggagatattggcgtgtggtggaggaaggttgagtgggggt |
320 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32460335 |
gagagtgtttgagtcggagttgaagtcagagtggtggagggagaaggtgtatgttgcggcggagatattggcgtgtggtggaggaaggttgagtgggggt |
32460236 |
T |
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| Q |
321 |
ctgagactgtggaaggttttggaaatggaattgaagccggttttgggatccattgagttggtgatgatgt |
390 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32460235 |
ctgagactgtggaaggttttggaaatggaattgaagccggttttgggatccattgagttggtgatgatgt |
32460166 |
T |
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