View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13273_high_45 (Length: 203)
Name: NF13273_high_45
Description: NF13273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13273_high_45 |
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Alignment Details
Target: chr1 (Bit Score: 111; Significance: 3e-56; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 68 - 186
Target Start/End: Original strand, 760389 - 760507
Alignment:
| Q |
68 |
aaatgcaggaattaaggatcgttacctttaacgtcacacagtatgtaacagtctgaccctaccctaccaatcgacggtgtttcttgtggtcttctcgctg |
167 |
Q |
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| T |
760389 |
aaatgcaggaattatggatcgttacctttaacgtcacacagtatgtaacagtctgaccctaccctaccagtcgacggtgtttcttgtggtcttctcgctg |
760488 |
T |
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| Q |
168 |
catatctctaggataatgt |
186 |
Q |
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||||||||||||||||||| |
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| T |
760489 |
catatctctaggataatgt |
760507 |
T |
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