View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13273_low_12 (Length: 436)

Name: NF13273_low_12
Description: NF13273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13273_low_12
NF13273_low_12
[»] chr7 (55 HSPs)
chr7 (1-143)||(7345933-7346075)
chr7 (1-143)||(48755503-48755645)
chr7 (1-108)||(33341317-33341424)
chr7 (1-108)||(34558291-34558398)
chr7 (1-108)||(35480227-35480333)
chr7 (1-108)||(41127161-41127268)
chr7 (1-108)||(41616643-41616750)
chr7 (1-99)||(41618498-41618596)
chr7 (1-108)||(34557416-34557523)
chr7 (5-99)||(30222669-30222763)
chr7 (1-99)||(30223975-30224073)
chr7 (1-108)||(2903063-2903170)
chr7 (1-108)||(38002504-38002611)
chr7 (1-91)||(36673843-36673933)
chr7 (1-99)||(41126258-41126356)
chr7 (5-108)||(36672846-36672949)
chr7 (1-108)||(38001523-38001630)
chr7 (1-91)||(19278372-19278462)
chr7 (15-99)||(2904046-2904130)
chr7 (1-63)||(1884259-1884321)
chr7 (1-63)||(1885276-1885338)
chr7 (1-59)||(19848873-19848931)
chr7 (186-248)||(7346127-7346193)
chr7 (1-58)||(48754015-48754072)
chr7 (1-59)||(8439785-8439843)
chr7 (1-63)||(18670538-18670600)
chr7 (1-59)||(18801234-18801292)
chr7 (1-99)||(43936139-43936237)
chr7 (1-99)||(44114655-44114752)
chr7 (1-125)||(4857220-4857344)
chr7 (1-53)||(43935204-43935256)
chr7 (1-68)||(14107851-14107918)
chr7 (1-68)||(14417808-14417875)
chr7 (49-135)||(13286957-13287043)
chr7 (1-59)||(18802428-18802486)
chr7 (1-59)||(19279651-19279709)
chr7 (1-59)||(21171525-21171583)
chr7 (1-59)||(33228866-33228924)
chr7 (1-59)||(33459582-33459640)
chr7 (1-59)||(36702796-36702854)
chr7 (1-59)||(40501403-40501461)
chr7 (1-59)||(40501494-40501552)
chr7 (1-59)||(41516383-41516441)
chr7 (1-99)||(46674933-46675031)
chr7 (5-99)||(47163176-47163270)
chr7 (1-59)||(47809625-47809683)
chr7 (1-58)||(7347260-7347317)
chr7 (2-59)||(8439931-8439988)
chr7 (194-248)||(34557547-34557605)
chr7 (194-248)||(34558209-34558267)
chr7 (194-248)||(38002422-38002480)
chr7 (1-58)||(40926559-40926616)
chr7 (398-430)||(7346336-7346368)
chr7 (1-53)||(29754731-29754783)
chr7 (1-53)||(45721811-45721863)
[»] chr3 (72 HSPs)
chr3 (1-143)||(7821941-7822083)
chr3 (1-143)||(35633246-35633388)
chr3 (1-108)||(5416217-5416324)
chr3 (1-108)||(48035314-48035421)
chr3 (1-108)||(52292613-52292720)
chr3 (2-108)||(52705298-52705404)
chr3 (1-108)||(1301051-1301158)
chr3 (1-108)||(32974213-32974320)
chr3 (1-108)||(53047916-53048023)
chr3 (1-108)||(53342735-53342842)
chr3 (1-108)||(55443540-55443647)
chr3 (1-102)||(40502211-40502312)
chr3 (1-108)||(5417038-5417145)
chr3 (1-125)||(17350075-17350199)
chr3 (1-104)||(7583489-7583592)
chr3 (1-108)||(11482977-11483084)
chr3 (5-108)||(46446392-46446495)
chr3 (1-99)||(32973158-32973256)
chr3 (36-108)||(11481955-11482027)
chr3 (1-108)||(39288429-39288536)
chr3 (5-108)||(40501831-40501934)
chr3 (1-108)||(55442613-55442720)
chr3 (1-99)||(53049036-53049134)
chr3 (1-125)||(39133036-39133160)
chr3 (1-99)||(39287489-39287587)
chr3 (1-99)||(52293522-52293620)
chr3 (1-86)||(19579306-19579391)
chr3 (1-99)||(54653965-54654063)
chr3 (187-248)||(7821822-7821887)
chr3 (1-53)||(47806837-47806889)
chr3 (1-63)||(34901671-34901733)
chr3 (1-63)||(39190759-39190821)
chr3 (1-71)||(53347026-53347095)
chr3 (1-53)||(11219449-11219501)
chr3 (1-53)||(19253047-19253099)
chr3 (8-108)||(35835809-35835909)
chr3 (8-108)||(35892526-35892626)
chr3 (1-108)||(8371239-8371346)
chr3 (1-68)||(26798936-26799003)
chr3 (1-68)||(43101913-43101980)
chr3 (1-59)||(8372655-8372713)
chr3 (1-59)||(10987692-10987750)
chr3 (1-63)||(19579239-19579301)
chr3 (1-123)||(25583133-25583255)
chr3 (1-59)||(30431394-30431452)
chr3 (1-59)||(41387472-41387530)
chr3 (1-99)||(47855337-47855435)
chr3 (1-58)||(11220698-11220755)
chr3 (1-53)||(33563968-33564020)
chr3 (192-248)||(35633446-35633506)
chr3 (13-108)||(48826770-48826865)
chr3 (1-63)||(381974-382036)
chr3 (193-248)||(11482050-11482109)
chr3 (1-59)||(13077990-13078048)
chr3 (1-59)||(19283753-19283811)
chr3 (1-59)||(47766990-47767047)
chr3 (1-59)||(51214205-51214263)
chr3 (1-59)||(51401390-51401448)
chr3 (1-59)||(51825660-51825718)
chr3 (24-125)||(7483498-7483599)
chr3 (16-125)||(12062357-12062466)
chr3 (194-248)||(32974131-32974189)
chr3 (194-248)||(48035232-48035290)
chr3 (1-54)||(55015661-55015714)
chr3 (1-53)||(2225069-2225121)
chr3 (1-53)||(7575523-7575575)
chr3 (3-59)||(29536735-29536791)
chr3 (1-125)||(32979107-32979231)
chr3 (1-53)||(41386149-41386201)
chr3 (1-53)||(47808151-47808203)
chr3 (5-41)||(47854533-47854569)
chr3 (1-53)||(49122047-49122099)
[»] chr4 (53 HSPs)
chr4 (1-143)||(15445455-15445597)
chr4 (1-107)||(44690846-44690952)
chr4 (1-108)||(2310772-2310879)
chr4 (1-99)||(29833391-29833489)
chr4 (1-108)||(30671013-30671120)
chr4 (5-108)||(2309867-2309970)
chr4 (1-107)||(52880832-52880939)
chr4 (1-93)||(53401458-53401548)
chr4 (1-93)||(19049877-19049969)
chr4 (5-108)||(52881920-52882023)
chr4 (186-248)||(53401318-53401384)
chr4 (5-99)||(526718-526812)
chr4 (1-99)||(29686275-29686373)
chr4 (1-91)||(30672071-30672161)
chr4 (1-98)||(43894124-43894221)
chr4 (1-81)||(12396891-12396971)
chr4 (49-108)||(19048942-19049001)
chr4 (1-99)||(936235-936333)
chr4 (5-71)||(937125-937191)
chr4 (1-59)||(28103525-28103583)
chr4 (39-132)||(53151540-53151632)
chr4 (1-58)||(53400204-53400261)
chr4 (1-89)||(29834441-29834529)
chr4 (74-108)||(12391858-12391892)
chr4 (1-63)||(26791460-26791521)
chr4 (1-59)||(37559017-37559075)
chr4 (1-59)||(55953891-55953949)
chr4 (186-240)||(15445649-15445707)
chr4 (194-248)||(19049025-19049083)
chr4 (1-53)||(30682739-30682791)
chr4 (1-53)||(31711111-31711163)
chr4 (24-99)||(36604840-36604915)
chr4 (26-125)||(43419348-43419447)
chr4 (1-71)||(96708-96778)
chr4 (1-59)||(15446709-15446767)
chr4 (1-59)||(26202425-26202483)
chr4 (1-99)||(26788541-26788639)
chr4 (1-59)||(30441628-30441686)
chr4 (5-115)||(30683010-30683120)
chr4 (1-99)||(33377363-33377461)
chr4 (1-59)||(37560338-37560396)
chr4 (1-99)||(44128333-44128431)
chr4 (1-59)||(46796065-46796123)
chr4 (1-62)||(8510874-8510935)
chr4 (1-62)||(8516888-8516949)
chr4 (194-248)||(12391776-12391834)
chr4 (5-58)||(28370485-28370538)
chr4 (1-58)||(56000306-56000363)
chr4 (1-53)||(10403298-10403350)
chr4 (1-53)||(15317721-15317773)
chr4 (18-130)||(17494163-17494275)
chr4 (1-53)||(48207762-48207814)
chr4 (1-53)||(56297724-56297776)
[»] chr8 (31 HSPs)
chr8 (1-143)||(45384259-45384401)
chr8 (1-108)||(6844563-6844670)
chr8 (1-125)||(35943926-35944051)
chr8 (1-99)||(10053743-10053841)
chr8 (1-99)||(31625383-31625481)
chr8 (1-122)||(10052123-10052244)
chr8 (1-41)||(45385851-45385891)
chr8 (16-125)||(13367023-13367132)
chr8 (1-45)||(117067-117111)
chr8 (1-89)||(6843774-6843864)
chr8 (1-59)||(14820212-14820270)
chr8 (1-59)||(24068349-24068407)
chr8 (1-99)||(37274906-37275004)
chr8 (1-59)||(43386741-43386799)
chr8 (1-62)||(24706248-24706309)
chr8 (5-121)||(7486100-7486216)
chr8 (24-108)||(13513462-13513546)
chr8 (24-108)||(13602995-13603079)
chr8 (1-125)||(24069419-24069543)
chr8 (56-126)||(38664443-38664514)
chr8 (1-63)||(13360372-13360434)
chr8 (194-248)||(6844481-6844539)
chr8 (1-62)||(7561818-7561879)
chr8 (2-59)||(21553747-21553804)
chr8 (1-90)||(35945445-35945534)
chr8 (186-248)||(38664583-38664649)
chr8 (5-53)||(7815066-7815114)
chr8 (1-125)||(16363785-16363909)
chr8 (1-29)||(24703228-24703256)
chr8 (5-125)||(36070201-36070321)
chr8 (1-53)||(37324733-37324785)
[»] chr6 (24 HSPs)
chr6 (1-108)||(8447240-8447347)
chr6 (1-108)||(8456044-8456151)
chr6 (1-108)||(19367736-19367843)
chr6 (1-108)||(26584027-26584134)
chr6 (1-108)||(28226408-28226515)
chr6 (1-107)||(26581972-26582077)
chr6 (1-91)||(18773673-18773763)
chr6 (1-108)||(13173056-13173162)
chr6 (5-91)||(2138644-2138730)
chr6 (1-107)||(28225443-28225549)
chr6 (7-108)||(13176323-13176424)
chr6 (1-99)||(19368517-19368615)
chr6 (1-125)||(27440148-27440272)
chr6 (1-121)||(31738382-31738502)
chr6 (22-125)||(14328747-14328850)
chr6 (22-125)||(14421757-14421860)
chr6 (1-53)||(27438809-27438861)
chr6 (1-53)||(33802062-33802114)
chr6 (1-59)||(22299942-22300000)
chr6 (194-248)||(26583945-26584003)
chr6 (194-248)||(28226326-28226384)
chr6 (1-98)||(31740272-31740369)
chr6 (1-53)||(17916514-17916566)
chr6 (1-53)||(33807708-33807760)
[»] chr5 (38 HSPs)
chr5 (1-108)||(22650618-22650725)
chr5 (1-108)||(20991639-20991746)
chr5 (43-143)||(11443568-11443668)
chr5 (1-108)||(32521705-32521812)
chr5 (1-108)||(4567964-4568071)
chr5 (1-107)||(15509214-15509320)
chr5 (1-99)||(20988709-20988807)
chr5 (1-108)||(21387656-21387763)
chr5 (1-91)||(15510270-15510360)
chr5 (5-98)||(32521922-32522015)
chr5 (1-99)||(41905194-41905292)
chr5 (1-63)||(5061047-5061109)
chr5 (1-89)||(4566970-4567058)
chr5 (1-108)||(18693717-18693824)
chr5 (1-63)||(5062221-5062283)
chr5 (1-59)||(19827179-19827237)
chr5 (1-53)||(1273385-1273437)
chr5 (1-125)||(5382961-5383085)
chr5 (1-91)||(7345397-7345487)
chr5 (1-58)||(12936142-12936199)
chr5 (5-59)||(1273112-1273166)
chr5 (1-59)||(15613524-15613582)
chr5 (1-59)||(19050768-19050826)
chr5 (1-59)||(37371076-37371134)
chr5 (1-59)||(37371222-37371280)
chr5 (1-58)||(1663206-1663263)
chr5 (1-34)||(6914734-6914767)
chr5 (1-58)||(12950300-12950357)
chr5 (1-62)||(12952069-12952130)
chr5 (4-53)||(15615005-15615054)
chr5 (1-58)||(26912378-26912435)
chr5 (1-62)||(32411983-32412044)
chr5 (5-98)||(42979471-42979564)
chr5 (1-53)||(12933770-12933822)
chr5 (1-53)||(19524002-19524054)
chr5 (1-41)||(21306610-21306650)
chr5 (1-41)||(21314448-21314488)
chr5 (5-53)||(42980754-42980802)
[»] chr1 (54 HSPs)
chr1 (1-107)||(1061443-1061549)
chr1 (1-108)||(35683074-35683181)
chr1 (1-108)||(48934260-48934367)
chr1 (5-108)||(1872960-1873063)
chr1 (1-108)||(2236832-2236939)
chr1 (1-108)||(14312794-14312901)
chr1 (1-108)||(34532692-34532799)
chr1 (1-99)||(2237977-2238075)
chr1 (1-99)||(48935109-48935207)
chr1 (1-108)||(9119821-9119928)
chr1 (1-105)||(42244523-42244628)
chr1 (1-104)||(1873848-1873951)
chr1 (1-108)||(9123389-9123496)
chr1 (1-108)||(26056137-26056244)
chr1 (1-99)||(3979312-3979410)
chr1 (1-99)||(35684202-35684299)
chr1 (1-97)||(34531682-34531778)
chr1 (1-125)||(44977240-44977364)
chr1 (1-63)||(51424270-51424332)
chr1 (1-121)||(29001099-29001219)
chr1 (2-58)||(42248345-42248401)
chr1 (1-63)||(13567185-13567247)
chr1 (1-99)||(25889491-25889589)
chr1 (97-143)||(42246006-42246052)
chr1 (1-87)||(48973217-48973303)
chr1 (4-63)||(44340098-44340157)
chr1 (1-95)||(1061347-1061441)
chr1 (24-134)||(9415666-9415776)
chr1 (1-63)||(28999859-28999921)
chr1 (1-71)||(48974433-48974503)
chr1 (1-58)||(33941336-33941393)
chr1 (1-53)||(9633794-9633846)
chr1 (1-41)||(26054916-26054956)
chr1 (1-89)||(37623269-37623357)
chr1 (1-53)||(49139820-49139872)
chr1 (1-53)||(50678385-50678437)
chr1 (22-125)||(14169659-14169762)
chr1 (1-99)||(3978063-3978161)
chr1 (1-59)||(13641276-13641334)
chr1 (1-59)||(13929314-13929372)
chr1 (1-59)||(25785987-25786045)
chr1 (1-47)||(30548515-30548561)
chr1 (1-63)||(31859610-31859671)
chr1 (1-47)||(33793798-33793844)
chr1 (1-59)||(47511386-47511444)
chr1 (1-58)||(2973048-2973105)
chr1 (1-58)||(20953307-20953364)
chr1 (1-62)||(29264890-29264951)
chr1 (194-248)||(48934391-48934449)
chr1 (1-53)||(14390277-14390329)
chr1 (1-53)||(25787209-25787261)
chr1 (1-53)||(38458105-38458157)
chr1 (1-53)||(40135382-40135434)
chr1 (1-53)||(47512129-47512181)
[»] chr2 (36 HSPs)
chr2 (1-108)||(3254875-3254982)
chr2 (1-108)||(3666258-3666365)
chr2 (1-108)||(4630074-4630181)
chr2 (1-108)||(33837745-33837852)
chr2 (1-108)||(41313257-41313364)
chr2 (1-99)||(2305559-2305657)
chr2 (1-105)||(3255871-3255975)
chr2 (1-108)||(4628901-4629008)
chr2 (9-99)||(2306660-2306750)
chr2 (1-86)||(3665243-3665328)
chr2 (1-63)||(5564078-5564140)
chr2 (1-99)||(33836788-33836886)
chr2 (1-99)||(41312519-41312617)
chr2 (1-65)||(5565178-5565242)
chr2 (22-125)||(7490168-7490271)
chr2 (1-59)||(7038371-7038429)
chr2 (1-63)||(10477361-10477423)
chr2 (1-63)||(15268400-15268462)
chr2 (1-69)||(6209093-6209161)
chr2 (1-53)||(6706945-6706997)
chr2 (1-59)||(12852905-12852963)
chr2 (1-59)||(12854143-12854201)
chr2 (1-63)||(15269127-15269189)
chr2 (1-63)||(41295124-41295186)
chr2 (1-47)||(42368359-42368405)
chr2 (1-62)||(21545105-21545166)
chr2 (1-59)||(27264612-27264670)
chr2 (1-59)||(43015558-43015616)
chr2 (1-46)||(14573860-14573905)
chr2 (36-125)||(15850632-15850721)
chr2 (1-62)||(20948421-20948482)
chr2 (1-62)||(21541080-21541141)
chr2 (1-62)||(30202919-30202980)
chr2 (1-125)||(37869013-37869137)
chr2 (1-125)||(7036985-7037109)
chr2 (1-45)||(11575508-11575552)
[»] scaffold0038 (3 HSPs)
scaffold0038 (1-108)||(26906-27013)
scaffold0038 (1-107)||(25941-26047)
scaffold0038 (194-248)||(26824-26882)
[»] scaffold0155 (2 HSPs)
scaffold0155 (1-108)||(5188-5295)
scaffold0155 (194-248)||(5319-5377)
[»] scaffold0177 (1 HSPs)
scaffold0177 (1-99)||(1774-1872)
[»] scaffold0002 (1 HSPs)
scaffold0002 (5-99)||(458459-458553)
[»] scaffold0084 (2 HSPs)
scaffold0084 (1-125)||(13177-13301)
scaffold0084 (1-99)||(11725-11823)
[»] scaffold1827 (2 HSPs)
scaffold1827 (1-108)||(1049-1155)
scaffold1827 (195-248)||(968-1025)
[»] scaffold0178 (2 HSPs)
scaffold0178 (1-99)||(2264-2362)
scaffold0178 (1-41)||(1231-1270)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-125)||(47089-47213)
scaffold0003 (1-53)||(48501-48553)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-59)||(39940-39998)
[»] scaffold0046 (1 HSPs)
scaffold0046 (1-59)||(23425-23483)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-99)||(72985-73083)
[»] scaffold0630 (2 HSPs)
scaffold0630 (1-62)||(3088-3149)
scaffold0630 (3-62)||(2031-2090)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-58)||(56740-56797)
[»] scaffold0007 (1 HSPs)
scaffold0007 (2-59)||(28152-28209)
[»] scaffold0687 (1 HSPs)
scaffold0687 (5-53)||(6609-6657)
[»] scaffold0369 (1 HSPs)
scaffold0369 (1-53)||(12929-12981)


Alignment Details
Target: chr7 (Bit Score: 119; Significance: 1e-60; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 7345933 - 7346075
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||    
T  7345933 taacttatttttggatttcattttggtcccataaatataaactgtcttaatttggtcccttatttcttttgtcgttacctcttttggtcctatccgttac 7346032  T
Q  101 attttaaccataaatgtctaaggtgtaacagcattgcaggtgg 143  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  7346033 attttaatcataaatgtctaaggtgtaacagcattgcaggtgg 7346075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 48755645 - 48755503
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||||| ||||||||||||||| |||| |||||||||||| |||||  |||||||| | |||||| ||||||| |||||||||||||||||||    
T  48755645 taacttatttttgaatttcattttggtcctataactataaaatgtctcaatttgatcccttatgttttttgccgttacctattttggtcctatccgttac 48755546  T
Q  101 attttaaccataaatgtctaaggtgtaacagcattgcaggtgg 143  Q
    ||||||||||||||| |||||||||||||| ||||||||||||    
T  48755545 attttaaccataaatatctaaggtgtaacaacattgcaggtgg 48755503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 33341317 - 33341424
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||||||||| ||||||||| ||||| |||||| ||||| ||||| |||| |||| |||||||| |||||||||||||||||||||||||||    
T  33341317 taacttatttttggattttattttggtctcataactataaattgtctcaatttggtccattatgtcttttgccgttacctcttttggtcctatccgttac 33341416  T
Q  101 attttaac 108  Q
    ||||||||    
T  33341417 attttaac 33341424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 34558398 - 34558291
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||||||||||||||| ||| |||||| | ||| ||||| ||||||||| |||||||| |||||||||||||||||||||||||||    
T  34558398 taacttattttcggatttcattttggtcccctaactataaagtatctcaatttggtcccttatgtcttttgccgttacctcttttggtcctatccgttac 34558299  T
Q  101 attttaac 108  Q
    ||||||||    
T  34558298 attttaac 34558291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 35480227 - 35480333
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  35480227 taacttattttcggatttcattttggtccc-taactataaagtgtctcaatttagtcccttatgtcttttgccgttacctcttttggtcctatcggttac 35480325  T
Q  101 attttaac 108  Q
    ||||||||    
T  35480326 attttaac 35480333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 41127268 - 41127161
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||||||||||||||| ||| |||||| | ||| ||||| |||| |||| |||||||| ||||| |||||||||||||||||||||    
T  41127268 taacttattttcggatttcattttggtcccctaactataaagtatctcaatttggtcctttatgtcttttgccgttacatcttttggtcctatccgttac 41127169  T
Q  101 attttaac 108  Q
    ||||||||    
T  41127168 attttaac 41127161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 41616643 - 41616750
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||| ||||||||| |||||||  |||| |||||||| |||||||| ||||    
T  41616643 taacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgtcgttatctcttttgatcctatcctttac 41616742  T
Q  101 attttaac 108  Q
    ||||||||    
T  41616743 attttaac 41616750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 41618596 - 41618498
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||| ||||| |||| |||| |||| ||  |||||||||||||||||| |||||||    
T  41618596 taacttatttttggatttcattttggtcccctaattataaagtgtctaaatttggtccattatgtcttctgtcgttacctcttttggtcctctccgtta 41618498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 34557416 - 34557523
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||| ||||||||||| ||| |||||| ||||| ||||| ||||||||| |||||||| |||   |||||||||| ||||||||||    
T  34557416 taacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgccgtttattcttttggtcatatccgttac 34557515  T
Q  101 attttaac 108  Q
    ||||||||    
T  34557516 attttaac 34557523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 30222669 - 30222763
Alignment:
Q  5 ttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    |||||||||||||||||||||||||| |||||||||| | ||| ||||| ||||||||| |||| ||  |||||||||||||||||| |||||||    
T  30222669 ttatttttggatttcattttggtcccctaattataaagtatctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctccgtta 30222763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 30224073 - 30223975
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||| ||||||||| |||| ||| ||||| |||||||||||| |||||||    
T  30224073 taacttattttcggatttcattttggtcccctaactataaattgtctcaatttggtcccttatgtcttctgccgttacatcttttggtcctctccgtta 30223975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 2903063 - 2903170
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| ||||||||||||| |  | ||| |||||| ||||| ||||| ||||||||| |||||| |  |||||| |||||||||||||||||||    
T  2903063 taacttattttcggatttcattttgatttcctaactataaagtgtctcaatttggtcccttatgtctttttccattaccttttttggtcctatccgttac 2903162  T
Q  101 attttaac 108  Q
    ||||||||    
T  2903163 attttaac 2903170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 38002611 - 38002504
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||  ||||||||||||||||| ||| |||||| ||||| ||||| ||||||||| | ||| |  ||| |||||||||||||||||| ||||    
T  38002611 taacttattttcagatttcattttggtcccttaactataaagtgtctcaatttggtcccttatctttttggtcgtttcctcttttggtcctatccattac 38002512  T
Q  101 attttaac 108  Q
    ||||||||    
T  38002511 attttaac 38002504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 36673933 - 36673843
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcct 91  Q
    ||||||||||| |||||| ||||||||||| ||| |||||||||||| ||||| ||||||||| |||| ||  ||||||||||||||||||    
T  36673933 taacttattttcggattttattttggtcccctaactataaaatgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcct 36673843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 41126258 - 41126356
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    |||||||||||  ||||||||||||||||| ||| |||||| ||||| ||||| ||||||||| |||| ||  |||||||||||||||||| |||||||    
T  41126258 taacttattttcagatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctccgtta 41126356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 36672846 - 36672949
Alignment:
Q  5 ttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattt 104  Q
    |||||||||||||| ||||||||||| ||| |||||| | | |||| || ||||||| | ||||||||  ||||||||||| ||||||||||||| ||||    
T  36672846 ttatttttggattttattttggtcccctaactataaagtattttaaattggtcccttgtgtcttttgccattacctcttttagtcctatccgttatattt 36672945  T
Q  105 taac 108  Q
    ||||    
T  36672946 taac 36672949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 38001523 - 38001630
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| | |||||||||||||||  ||| |||||| ||| | ||||| ||||||||| |||||||  |||| ||||||||||| |||| |||||    
T  38001523 taacttattttcgaatttcattttggtcctctaactataaagtgtttcaatttggtcccttatgtcttttgtcgttatctcttttggtcatatctgttac 38001622  T
Q  101 attttaac 108  Q
    ||||||||    
T  38001623 attttaac 38001630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 19278372 - 19278462
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcct 91  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||| ||||| ||||| || ||||| ||| |||  || ||||||||||    
T  19278372 taacttatttttggatttcattttggtcccttaattataaagtgtctcaatttggtcccataattcttctgccgtttactattttggtcct 19278462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 2904130 - 2904046
Alignment:
Q  15 atttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    |||||||||||||||| ||| |||||||||||| ||||||||   |||| |||| ||| |||||||||||||||||| |||||||    
T  2904130 atttcattttggtcccctaactataaaatgtctcaatttagtttgttatgtcttctgccgttacctcttttggtcctctccgtta 2904046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 1884259 - 1884321
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttat 63  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||||| ||||| |||||||||    
T  1884259 taacttatttttgaattttattttggtcccttaattataaaatgtctcaatttggtcccttat 1884321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 1885338 - 1885276
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttat 63  Q
    ||||||||||||| |||||||||||||||| |||||||||| | ||| ||||| |||||||||    
T  1885338 taacttatttttgaatttcattttggtcccttaattataaagtatctcaatttggtcccttat 1885276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 19848931 - 19848873
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||||||||||||||||||| ||| |||||| ||||| ||||| |||||    
T  19848931 taacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtccc 19848873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 186 - 248
Target Start/End: Original strand, 7346127 - 7346193
Alignment:
Q  186 caaatagaaaaccgttggatcatgtaggtctattgta----acggtgaataattaacacctaatttt 248  Q
    ||||||||||| ||||||||| |||||||||||||||    ||||||||||||||||| ||||||||    
T  7346127 caaatagaaaatcgttggatcttgtaggtctattgtaacatacggtgaataattaacatctaatttt 7346193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 48754015 - 48754072
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcc 58  Q
    |||||||||||| ||||| |||||||||||||||||||||| ||| | ||||||||||    
T  48754015 taacttatttttagattttattttggtcccataattataaagtgtttcaatttagtcc 48754072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 8439785 - 8439843
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    ||||||||||||| |||||||||||||||| ||||| |||| ||||| ||||| |||||    
T  8439785 taacttatttttgaatttcattttggtcccttaattgtaaactgtctcaatttggtccc 8439843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 18670600 - 18670538
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttat 63  Q
    |||||||||||||||||| ||||||||||| ||| | |||||||||| || || |||||||||    
T  18670600 taacttatttttggattttattttggtcccttaactttaaaatgtctcaaattggtcccttat 18670538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 18801234 - 18801292
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    ||||||||||||| |||||||||||||||| ||| |||||| ||||| ||||| |||||    
T  18801234 taacttatttttgaatttcattttggtcccctaactataaagtgtctcaatttggtccc 18801292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 43936237 - 43936139
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    |||||||||||||||||||||||||||||  ||| |||||| | ||||||||| ||| | || ||||| ||  |||  || |||||||||| |||||||    
T  43936237 taacttatttttggatttcattttggtcctctaactataaagtttcttaatttggtctcataattcttctgtcgtttactattttggtcctctccgtta 43936139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 44114752 - 44114655
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    |||||||||||| | ||||||||||||||| || | ||||||| ||| ||  | ||||||||| |||| | |||| ||||||||||||||| |||||||    
T  44114752 taacttatttttagttttcattttggtcccctact-ataaaatatctcaaactggtcccttatatcttctactgtcacctcttttggtcctctccgtta 44114655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 4857220 - 4857344
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||||| ||||| ||||||||| ||| ||||||||||||  |||| |||||  |  |||| ||| |||  || |||| ||||| |||||||     
T  4857220 taacttatttttggttttcactttggtcccctaactataaaatgtctcgatttggtcccacaaatcttctgccgtttactgttttagtcctctccgttag 4857319  T
Q  101 attttaaccataaatgtctaaggtg 125  Q
     |||||||   ||||||||||||||    
T  4857320 tttttaacatcaaatgtctaaggtg 4857344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 43935204 - 43935256
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||||||||||||||||||||  ||| |||||| ||||| |||||    
T  43935204 taacttatttttggatttcattttggtcctctaactataaagtgtctcaattt 43935256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 14107851 - 14107918
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttctt 68  Q
    |||||||||||||| ||||||||||||||| ||| |||||| ||||| ||  | ||||||||| ||||    
T  14107851 taacttatttttggttttcattttggtcccttaactataaagtgtctcaaagtggtcccttatatctt 14107918  T

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Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 14417808 - 14417875
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttctt 68  Q
    |||||||||||||| ||||||||||||||| ||| |||||| ||||| ||  | ||||||||| ||||    
T  14417808 taacttatttttggttttcattttggtcccttaactataaagtgtctcaaagtggtcccttatatctt 14417875  T

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Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 135
Target Start/End: Complemental strand, 13287043 - 13286957
Alignment:
Q  49 aatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattttaaccataaatgtctaaggtgtaacagcatt 135  Q
    ||||| ||||||||| |||| |||||||  || |||||||||| | |||||  |||||||| |||||||||||| || |||| ||||    
T  13287043 aatttggtcccttatgtcttatgctgtttactattttggtcctcttcgttagtttttaaccttaaatgtctaagatgaaacaacatt 13286957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 18802486 - 18802428
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||| | |||||||||| |||| ||| |||||| ||||| |||||||||||    
T  18802486 taacttattttttgttttcattttgatcccctaactataaagtgtctcaatttagtccc 18802428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 19279709 - 19279651
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||| ||||| ||||||||| ||| |||||| ||||| ||||| |||||    
T  19279709 taacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtccc 19279651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 21171583 - 21171525
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||||||||| ||||||||| ||| | |||| ||||| ||||| |||||    
T  21171583 taacttatttttggatttcaatttggtcccctaactttaaattgtctcaatttggtccc 21171525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 33228866 - 33228924
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    ||||||||||||| |||||||||||||||| ||||| |||| | ||| ||||| |||||    
T  33228866 taacttatttttgaatttcattttggtcccttaattttaaactatctcaatttggtccc 33228924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 33459640 - 33459582
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||| ||||||||||||||  ||| |||||| ||||| ||||| |||||    
T  33459640 taacttatttttggttttcattttggtcctctaactataaagtgtctcaatttggtccc 33459582  T

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Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 36702796 - 36702854
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||| ||||||||||||||||| ||| | |||| ||||| ||||| |||||    
T  36702796 taacttatttttagatttcattttggtcccttaactttaaactgtctcaatttggtccc 36702854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 40501461 - 40501403
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    ||||||||||||| |||||||||||||||| ||||| ||||  |||| ||||| |||||    
T  40501461 taacttatttttgaatttcattttggtcccttaattttaaaccgtctcaatttggtccc 40501403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 40501552 - 40501494
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    ||||||||||||| |||||||||||||||| ||||| ||||  |||| ||||| |||||    
T  40501552 taacttatttttgaatttcattttggtcccttaattttaaaccgtctcaatttggtccc 40501494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 41516441 - 41516383
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||| | ||| ||||||||||| ||| |||||| ||||||||||| |||||    
T  41516441 taacttattttttgttttaattttggtcccctaactataaagtgtcttaatttggtccc 41516383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 46675031 - 46674933
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    |||||||||||||| ||||| |||| |||| ||| |||||| |||||  |||| ||||| ||  |||||||| |||  || |||||||||| |||||||    
T  46675031 taacttatttttggttttcaatttgatcccttaactataaagtgtctcgatttggtcccataaatcttttgccgtttactattttggtcctctccgtta 46674933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 47163176 - 47163270
Alignment:
Q  5 ttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    |||||||||||||| ||||||||||  ||| |||||| || |||||||| ||||| ||  |||||| | |||  || |||||||||| |||||||    
T  47163176 ttatttttggattttattttggtcctctaactataaagtgccttaatttggtcccataaatctttttccgtttactattttggtcctctccgtta 47163270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 47809683 - 47809625
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    ||||||||||||| |||||||||||||||| ||| | |||| ||||| ||||| |||||    
T  47809683 taacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtccc 47809625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7347317 - 7347260
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcc 58  Q
    ||||||| |||| ||||| |||||||| ||||||||||||| ||||| ||||| ||||    
T  7347317 taacttaattttagattttattttggttccataattataaagtgtctcaatttggtcc 7347260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 8439988 - 8439931
Alignment:
Q  2 aacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||| |||||||||||||||| ||| | ||||  |||| |||||||||||    
T  8439988 aacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttagtccc 8439931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 248
Target Start/End: Original strand, 34557547 - 34557605
Alignment:
Q  194 aaaccgttggatcatgtaggtctattgta----acggtgaataattaacacctaatttt 248  Q
    ||||||||||||||||||||| |||||||    ||||||||| |||||||||| |||||    
T  34557547 aaaccgttggatcatgtaggtttattgtagcctacggtgaatgattaacacctgatttt 34557605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 34558267 - 34558209
Alignment:
Q  194 aaaccgttggatcatgtaggtctattgta----acggtgaataattaacacctaatttt 248  Q
    ||||||||||||||||||||| |||||||    ||||||||| |||||||||| |||||    
T  34558267 aaaccgttggatcatgtaggtttattgtagcctacggtgaatgattaacacctgatttt 34558209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 38002480 - 38002422
Alignment:
Q  194 aaaccgttggatcatgtaggtctattgta----acggtgaataattaacacctaatttt 248  Q
    ||||||||||||||||||||| |||||||    ||||||||| |||||||||| |||||    
T  38002480 aaaccgttggatcatgtaggtttattgtagcctacggtgaatgattaacacctgatttt 38002422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 40926616 - 40926559
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcc 58  Q
    |||||||||||||| ||||| ||||||||| ||| |||||| ||||| ||||| ||||    
T  40926616 taacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcc 40926559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 398 - 430
Target Start/End: Original strand, 7346336 - 7346368
Alignment:
Q  398 tccaccactattctatctctctctgctccttct 430  Q
    |||||||||||||||||||||||| ||||||||    
T  7346336 tccaccactattctatctctctcttctccttct 7346368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 29754783 - 29754731
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    ||||||||||||| |||||||||||||||| ||| | |||| ||||| |||||    
T  29754783 taacttatttttgaatttcattttggtcccttaactttaaactgtctcaattt 29754731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 45721863 - 45721811
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||| | ||||||||||||||| ||| |||||| ||||| |||||    
T  45721863 taacttatttttagttttcattttggtcccctaactataaagtgtctcaattt 45721811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 1e-48; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 7822083 - 7821941
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||| |||||||||| ||||||||| | |||||||||| ||||| ||||| ||||||||| |||||||| ||||||||||||||| |||||||||||    
T  7822083 taacttaattttggattttattttggtctcctaattataaagtgtctcaatttggtcccttatgtcttttgccgttacctcttttggtactatccgttac 7821984  T
Q  101 attttaaccataaatgtctaaggtgtaacagcattgcaggtgg 143  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  7821983 attttaaccataaatgtctaaggtgtaacaacattgcaggtgg 7821941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 35633246 - 35633388
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||| |||||  |||||||| | |||||| ||||||| |||| ||||||||||||||    
T  35633246 taacttatttttggatttcattttggtcctataactataaaatgtctcaatttgatcccttatgttttttgccgttacctatttttgtcctatccgttac 35633345  T
Q  101 attttaaccataaatgtctaaggtgtaacagcattgcaggtgg 143  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  35633346 attttaaccataaatgtctaaggtgtaacaacattgcaggtgg 35633388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 5416217 - 5416324
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||||||||||||||| ||| |||||||||||| ||||| ||||||||| |||||||  ||||||||||||||||| |||||||||    
T  5416217 taacttattttcggatttcattttggtcccctaactataaaatgtctcaatttggtcccttatgtcttttgtcgttacctcttttggtcccatccgttac 5416316  T
Q  101 attttaac 108  Q
    ||||||||    
T  5416317 attttaac 5416324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 48035421 - 48035314
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||| ||||||||| |||| ||| |||||||||||||||||| ||||||||    
T  48035421 taacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttatgccgttacctcttttggtcctctccgttac 48035322  T
Q  101 attttaac 108  Q
    ||||||||    
T  48035321 attttaac 48035314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 52292613 - 52292720
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||||||||| ||| |||||||  |||||||||||||||| ||||||||||    
T  52292613 taacttattttcggatttcattttggtcccctaactataaagtgtctcaatttagtcccgtatgtcttttgtcgttacctcttttggtcttatccgttac 52292712  T
Q  101 attttaac 108  Q
    ||||||||    
T  52292713 attttaac 52292720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 52705404 - 52705298
Alignment:
Q  2 aacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttaca 101  Q
    |||||||||| |||||||||||||||||| ||| |||||| ||||| ||||| ||||||||| ||||||| |||||||||||||| || |||||||||||    
T  52705404 aacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgttgttacctcttttgatcatatccgttaca 52705305  T
Q  102 ttttaac 108  Q
    |||||||    
T  52705304 ttttaac 52705298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 1301051 - 1301158
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| | |||| ||||||||||||||| |||||| ||||| ||||| ||||||||| |||||| | ||||||||||||||||||||| |||||    
T  1301051 taacttattttcgaattttattttggtcccataactataaagtgtctcaatttggtcccttatgtcttttaccgttacctcttttggtcctatctgttac 1301150  T
Q  101 attttaac 108  Q
    ||||||||    
T  1301151 attttaac 1301158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 32974320 - 32974213
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||| ||||||||| |||| ||| |||||||||||||||| | ||||||||    
T  32974320 taacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcatctccgttac 32974221  T
Q  101 attttaac 108  Q
    ||||||||    
T  32974220 attttaac 32974213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 53047916 - 53048023
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||| ||||||||| |||| ||  |||||||||||||||||| ||||||||    
T  53047916 taacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctccgttac 53048015  T
Q  101 attttaac 108  Q
    ||||||||    
T  53048016 attttaac 53048023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 53342735 - 53342842
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||| |||| |||| |||||||  ||||||||||||||| |||||||||||    
T  53342735 taacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccattatgtcttttgtcgttacctcttttggtactatccgttac 53342834  T
Q  101 attttaac 108  Q
    ||||||||    
T  53342835 attttaac 53342842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 55443647 - 55443540
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| | |||||||||||||||| ||| |||||| ||||| ||||| ||||||||| |||||||  ||||||||||||||||| |||||||||    
T  55443647 taacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgtcgttacctcttttggtcccatccgttac 55443548  T
Q  101 attttaac 108  Q
    ||||||||    
T  55443547 attttaac 55443540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 40502312 - 40502211
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||||||||| ||||||||||| ||| |||||| | ||| |||||| |||||||| |||||||  |||||||||||||||||||||||||||    
T  40502312 taacttatttttggattttattttggtcccctaactataaagtatctcaatttaatcccttatgtcttttgtcgttacctcttttggtcctatccgttac 40502213  T
Q  101 at 102  Q
    ||    
T  40502212 at 40502211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 5417145 - 5417038
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||| |  || ||||||||| ||||||| ||||||||||||||||| |||||||||     
T  5417145 taacttattttcggatttcattttggtcccctaactataaagtgtctcagattggtcccttatgtcttttgttgttacctcttttggtcttatccgttat 5417046  T
Q  101 attttaac 108  Q
    ||||||||    
T  5417045 attttaac 5417038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 17350199 - 17350075
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||||| ||||| |||| |||| ||| |||||| ||||| ||||| ||||||||| |||| | |||||||||||||||||||| |||||||     
T  17350199 taacttatttttggttttcaatttgttcccctaactataaagtgtctcaatttggtcccttatgtcttctcctgttacctcttttggtcctctccgttag 17350100  T
Q  101 attttaaccataaatgtctaaggtg 125  Q
     |||||||   ||||||||||||||    
T  17350099 tttttaacatcaaatgtctaaggtg 17350075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 7583489 - 7583592
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||||||||||||||  ||| |||||| ||||| ||||| ||| ||||| |||||| | |||||||||||||||| ||||||||||    
T  7583489 taacttattttcggatttcattttggtccactaactataaagtgtctcaatttggtctcttatgtcttttaccgttacctcttttggtcatatccgttac 7583588  T
Q  101 attt 104  Q
    ||||    
T  7583589 attt 7583592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 11483084 - 11482977
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||  ||||||||||||||||| ||| |||||| |||||||||||  || ||||| |||||||  |||| ||||||||||| ||||||||||    
T  11483084 taacttattttcagatttcattttggtcccttaactataaagtgtcttaatttgatctcttatgtcttttgtcgttatctcttttggtcttatccgttac 11482985  T
Q  101 attttaac 108  Q
    ||||||||    
T  11482984 attttaac 11482977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 46446392 - 46446495
Alignment:
Q  5 ttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattt 104  Q
    ||||||| | |||| |||||||| || |||||||||| ||||| ||||  ||||||||| ||||||| ||||| ||||||||||||||||||||||||||    
T  46446392 ttattttcgaattttattttggtgccttaattataaagtgtctcaattcggtcccttatgtcttttgttgttatctcttttggtcctatccgttacattt 46446491  T
Q  105 taac 108  Q
    ||||    
T  46446492 taac 46446495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 32973158 - 32973256
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||| ||||||||| |||| ||| |||||||||||| ||||| |||||||    
T  32973158 taacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctctttttgtcctctccgtta 32973256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 11481955 - 11482027
Alignment:
Q  36 tataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattttaac 108  Q
    |||||| ||||| ||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  11481955 tataaagtgtctcaatttggtcccttatgtcttttgccgttacctcttttggtcctatccgttacattttaac 11482027  T

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Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 39288536 - 39288429
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||| ||||||||| |||| ||  |||| |||||||||| || ||| ||||    
T  39288536 taacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttatgtcgttatctcttttggttctctccattac 39288437  T
Q  101 attttaac 108  Q
    ||||||||    
T  39288436 attttaac 39288429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 40501831 - 40501934
Alignment:
Q  5 ttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattt 104  Q
    |||||||  ||||| ||||||||| | ||| |||||||| ||| ||||| ||||||||| |||||||| |||||||||||||||| ||||||||| ||||    
T  40501831 ttattttcagattttattttggtcacctaactataaaatatctcaatttggtcccttatgtcttttgccgttacctcttttggtcttatccgttaaattt 40501930  T
Q  105 taac 108  Q
    ||||    
T  40501931 taac 40501934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 55442613 - 55442720
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||   |||||||||||||||| ||| |||||| ||||| |||||  |||||||| ||||||| |||||||| ||||||||  |||||||||    
T  55442613 taacttattttcaaatttcattttggtcccctaactataaagtgtctcaatttgatcccttatgtcttttgttgttaccttttttggtctcatccgttac 55442712  T
Q  101 attttaac 108  Q
    ||||||||    
T  55442713 attttaac 55442720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 53049134 - 53049036
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    ||||||||||| |||||| ||||||||||| ||| |||||| ||||| ||||| ||||||||| |||| ||  |||||||||||||||||| |||||||    
T  53049134 taacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctccgtta 53049036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 39133036 - 39133160
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||||| ||||| ||||||||| ||| |||||| ||||| ||||| ||||||||| |||| |   |||||||||||||||||| || ||||     
T  39133036 taacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctctcgttacctcttttggtcctctctgttag 39133135  T
Q  101 attttaaccataaatgtctaaggtg 125  Q
     |||||||   ||||||||||||||    
T  39133136 tttttaacatcaaatgtctaaggtg 39133160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 39287489 - 39287587
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    ||||||||||| |||||||||||||||||  ||| |||||| ||||| ||||| ||||||||| | || ||  |||||||||||||||||| |||||||    
T  39287489 taacttattttcggatttcattttggtcctctaactataaagtgtctcaatttggtcccttatgttttctgtcgttacctcttttggtcctctccgtta 39287587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 52293620 - 52293522
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||| |||| |||| |||| |   |||||||||||||||||| |||||||    
T  52293620 taacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcctttatgtcttctatcgttacctcttttggtcctctccgtta 52293522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 19579391 - 19579306
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttg 86  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||| ||||||||| |||| ||  |||||||||||||    
T  19579391 taacttattttcggatttcattttggtcccttaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttg 19579306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 54654063 - 54653965
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    |||||||||||||||||||||||||||||| ||| |||||| ||||| ||||| ||||| || ||||| ||  |||  || |||||||||| |||||||    
T  54654063 taacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttctgtcgtttactattttggtcctctccgtta 54653965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 7821887 - 7821822
Alignment:
Q  187 aaatagaaaaccgttggatcatgtaggtctattgta----acggtgaataattaacacctaatttt 248  Q
    ||||||||||||||||||||||||||||||||||||    | ||||||| ||||||||||||||||    
T  7821887 aaatagaaaaccgttggatcatgtaggtctattgtagcctagggtgaatgattaacacctaatttt 7821822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 47806837 - 47806889
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||| |||||    
T  47806837 taacttatttttggatttcattttggtcccttaattataaagtgtctcaattt 47806889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 34901671 - 34901733
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttat 63  Q
    |||||||||||||||||||||||| ||||| |||||| |||| ||||||| || |||||||||    
T  34901671 taacttatttttggatttcattttcgtcccttaattaaaaaacgtcttaaattggtcccttat 34901733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 39190821 - 39190759
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttat 63  Q
    |||||||||||| ||||| ||||||||||| |||||||||| ||||| ||||||||| |||||    
T  39190821 taacttatttttagattttattttggtcccctaattataaagtgtctcaatttagtctcttat 39190759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 53347095 - 53347026
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttg 71  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||| ||| |||||||||||||    
T  53347095 taacttattttcggatttcattttggtccc-taaatataaagtgtctcaatttggtctcttatttcttttg 53347026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11219449 - 11219501
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||||||||||||||||||||| ||| |||||| ||||| |||||    
T  11219449 taacttatttttggatttcattttggtcccctaactataaagtgtctcaattt 11219501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 19253099 - 19253047
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||||| ||||| ||||||||| |||||||||||||||| |||||    
T  19253099 taacttatttttggttttcaatttggtcccctaattataaaatgtctcaattt 19253047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 35835909 - 35835809
Alignment:
Q  8 tttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattttaa 107  Q
    |||| |||||| |||||| || | ||| |||||| ||||| |||||  ||| | || |||||||| |||||||||||||||| || ||||||||||||||    
T  35835909 ttttcggattttattttgatctcctaagtataaagtgtctcaatttgatccttaatatcttttgccgttacctcttttggtcatacccgttacattttaa 35835810  T
Q  108 c 108  Q
    |    
T  35835809 c 35835809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 35892626 - 35892526
Alignment:
Q  8 tttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattttaa 107  Q
    |||| |||||| |||||| || | ||| |||||| ||||| |||||  ||| | || |||||||| |||||||||||||||| || ||||||||||||||    
T  35892626 ttttcggattttattttgatctcctaagtataaagtgtctcaatttgatccttaatatcttttgccgttacctcttttggtcatacccgttacattttaa 35892527  T
Q  108 c 108  Q
    |    
T  35892526 c 35892526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 8371239 - 8371346
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||| | ||||||||||||||| ||| |||||||||||| ||||| || || ||  |||| ||| |||  || |||||||||| |||||||     
T  8371239 taacttattttttgttttcattttggtcccctaactataaaatgtctcaatttggttccataaatcttctgcagtttactattttggtcctctccgttag 8371338  T
Q  101 attttaac 108  Q
     |||||||    
T  8371339 tttttaac 8371346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 26799003 - 26798936
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttctt 68  Q
    |||||||||||||| ||| ||||||||||| ||| |||||||||||| ||||| ||||| || |||||    
T  26799003 taacttatttttggtttttattttggtcccctaactataaaatgtctcaatttggtcccataattctt 26798936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 43101913 - 43101980
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttctt 68  Q
    |||||||||||||| ||||||||||||||  |||||||||| ||||| ||||| ||||| || |||||    
T  43101913 taacttatttttggttttcattttggtcctctaattataaagtgtctcaatttggtcccataattctt 43101980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 8372713 - 8372655
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||| ||||||||||||||| ||| |||||| ||||| ||||| |||||    
T  8372713 taacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtccc 8372655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 10987750 - 10987692
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||| ||||||||||||||| ||| |||||| ||||| ||||| |||||    
T  10987750 taacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtccc 10987692  T

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Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 19579239 - 19579301
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttat 63  Q
    |||||||||||  ||||||||||||||||| ||| |||||||||||| ||||| |||| ||||    
T  19579239 taacttattttcagatttcattttggtcccctaactataaaatgtctcaatttggtccgttat 19579301  T

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Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 25583133 - 25583255
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||||  ||||| ||||||||| ||| ||| ||| |||| ||||| ||||| ||  |||| ||| |||  || |||||||||| || ||||     
T  25583133 taacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtcccataagtcttctgccgtttactattttggtcctctctgttaa 25583232  T
Q  101 attttaaccataaatgtctaagg 123  Q
     |||||||| |||||||||||||    
T  25583233 tttttaaccttaaatgtctaagg 25583255  T

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Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 30431394 - 30431452
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    ||||||||||||| |||||||||||||||| ||||| |||| ||||| ||||| |||||    
T  30431394 taacttatttttgaatttcattttggtcccttaattttaaactgtctcaatttggtccc 30431452  T

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Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 41387530 - 41387472
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||| ||||| ||||||||| ||| |||||||||||| ||||| |||||    
T  41387530 taacttatttttggttttcaatttggtcccctaactataaaatgtctcaatttggtccc 41387472  T

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Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 47855435 - 47855337
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    |||||||||||||||||||||||||||||  ||| |||||| ||||| ||||| ||||  ||  |||| ||| |||  || |||||||||| |||||||    
T  47855435 taacttatttttggatttcattttggtccgttaactataaagtgtctcaatttggtcctataaatcttctgccgtttactattttggtcctctccgtta 47855337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 11220755 - 11220698
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcc 58  Q
    ||||||||||||| |||||||||||||||| ||| |||||| ||||| ||||| ||||    
T  11220755 taacttatttttgaatttcattttggtcccctaactataaagtgtctcaatttggtcc 11220698  T

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Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 33563968 - 33564020
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||||||||||||||| ||||| ||| |||||| ||||| |||||    
T  33563968 taacttatttttggatttcattttagtcccctaactataaagtgtctcaattt 33564020  T

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Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 35633446 - 35633506
Alignment:
Q  192 gaaaaccgttggatcatgtaggtctattgta----acggtgaataattaacacctaatttt 248  Q
    |||||| ||||||||| ||||||||||| ||    ||||||||||||||||||||||||||    
T  35633446 gaaaactgttggatcacgtaggtctattatagcctacggtgaataattaacacctaatttt 35633506  T

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Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 48826865 - 48826770
Alignment:
Q  13 ggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattttaac 108  Q
    |||||| ||||||||||| ||  |||||| ||| | || ||  |||||||| ||||||||  ||||||||||| || |||||||||| ||||||||    
T  48826865 ggattttattttggtcccctagctataaagtgtgtcaaattgatcccttatgtcttttgcaattacctcttttagttctatccgttatattttaac 48826770  T

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Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 381974 - 382036
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttat 63  Q
    ||||||||||||||||||||||||| |||| ||| ||||| |  ||| ||||| |||||||||    
T  381974 taacttatttttggatttcattttgatcccttaactataatacatctcaatttggtcccttat 382036  T

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Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 11482050 - 11482109
Alignment:
Q  193 aaaaccgttggatcatgtaggtctattgta----acggtgaataattaacacctaatttt 248  Q
    |||||||||||||||||||||| |||||||    ||||||||| |||||||||| |||||    
T  11482050 aaaaccgttggatcatgtaggtttattgtagcctacggtgaatgattaacacctgatttt 11482109  T

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Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 13078048 - 13077990
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||  ||||| ||||||||  ||| |||||||||||||||||| |||||    
T  13078048 taacttatttttgattttcaatttggtcctctaagtataaaatgtcttaatttggtccc 13077990  T

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Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 19283753 - 19283811
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    ||||||||||||| |||||||||||||||| ||| | ||||  |||| |||||||||||    
T  19283753 taacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttagtccc 19283811  T

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Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 47767047 - 47766990
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||| ||||||||||||||| ||| |||||| ||||| ||||| |||||    
T  47767047 taacttatttttggttttcattttggtccc-taactataaagtgtctcaatttggtccc 47766990  T

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Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 51214263 - 51214205
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    ||||||||||||| |||||||||||||||| ||| | |||| ||||| ||||| |||||    
T  51214263 taacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtccc 51214205  T

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Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 51401448 - 51401390
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||| ||||| ||||||||| ||| |||||| ||||| ||||| |||||    
T  51401448 taacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtccc 51401390  T

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Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 51825718 - 51825660
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||||||||| ||||||||| ||| |||||| ||| | ||||| |||||    
T  51825718 taacttatttttggatttcactttggtcccttaactataaagtgtttcaatttggtccc 51825660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 7483599 - 7483498
Alignment:
Q  24 tggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattttaaccataaatgtctaagg 123  Q
    ||||||| ||| || |||| ||||||| || ||||||||| |||| | | |||||||||||||||| | |||||||  |||||||   |||| |||||||    
T  7483599 tggtcccctaactaaaaaacgtcttaaattggtcccttatgtcttcttccgttacctcttttggtcatctccgttagtttttaacatcaaatatctaagg 7483500  T
Q  124 tg 125  Q
    ||    
T  7483499 tg 7483498  T

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Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 12062466 - 12062357
Alignment:
Q  16 tttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattttaaccataaat 115  Q
    ||||| ||||||||| ||| ||| || ||||| ||||| ||||| |   ||||||||||||  || |||||||| | ||| |||  |||||||| |||||    
T  12062466 tttcagtttggtcccttaactattaagtgtctcaatttggtcccattactcttttgctgtttactattttggtcatttccattagtttttaaccttaaat 12062367  T
Q  116 gtctaaggtg 125  Q
    ||||||||||    
T  12062366 gtctaaggtg 12062357  T

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Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 32974189 - 32974131
Alignment:
Q  194 aaaccgttggatcatgtaggtctattgta----acggtgaataattaacacctaatttt 248  Q
    ||||||||||||||||||||| |||||||    ||||||||| |||||||||| |||||    
T  32974189 aaaccgttggatcatgtaggtttattgtagcctacggtgaatgattaacacctgatttt 32974131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 48035290 - 48035232
Alignment:
Q  194 aaaccgttggatcatgtaggtctattgta----acggtgaataattaacacctaatttt 248  Q
    ||||||||||||||||||||| |||||||    ||||||||| |||||||||| |||||    
T  48035290 aaaccgttggatcatgtaggtttattgtagcctacggtgaatgattaacacctgatttt 48035232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 55015714 - 55015661
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattta 54  Q
    |||||||||||||||||| | ||||||||| ||||| |||| ||||| ||||||    
T  55015714 taacttatttttggattttaatttggtcccctaattttaaactgtctcaattta 55015661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 2225121 - 2225069
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||||||||||| ||||||||| ||| | |||| ||||| |||||    
T  2225121 taacttatttttggatttcaatttggtcccctaactttaaactgtctcaattt 2225069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7575575 - 7575523
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    ||||||||||||| |||||||||||||||| ||| | ||||  ||||||||||    
T  7575575 taacttatttttgaatttcattttggtcccttaactttaaaccgtcttaattt 7575523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 29536735 - 29536791
Alignment:
Q  3 acttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    ||||||||||||||||||||||| |||  ||| |||||| ||||| ||||| |||||    
T  29536735 acttatttttggatttcattttgatcctctaactataaagtgtctcaatttggtccc 29536791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 32979107 - 32979231
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||| ||||||  |||||||||||||||  ||| |||||| ||||| |||||  |||| ||  | || |||  ||||||||||||||||| |||||||     
T  32979107 taactaatttttaaatttcattttggtcctctaactataaagtgtctcaatttgatcccataaattttctgcaattacctcttttggtcctctccgttag 32979206  T
Q  101 attttaaccataaatgtctaaggtg 125  Q
     |||||||  |||| | ||||||||    
T  32979207 tttttaacattaaaagactaaggtg 32979231  T

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Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 41386149 - 41386201
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||||| ||||| ||||||||| ||| |||||| ||||| |||||    
T  41386149 taacttatttttggttttcaatttggtcccctaactataaagtgtctcaattt 41386201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 47808203 - 47808151
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||||||||||| |||||| || ||| |||||| ||||| |||||    
T  47808203 taacttatttttggatttcactttggttccttaactataaagtgtctcaattt 47808151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 47854533 - 47854569
Alignment:
Q  5 ttatttttggatttcattttggtcccataattataaa 41  Q
    |||||||||||||||||||||||||  ||||||||||    
T  47854533 ttatttttggatttcattttggtcctctaattataaa 47854569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 49122099 - 49122047
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||||| ||||||||||||| | ||| |||||| ||||| |||||    
T  49122099 taacttatttttggttttcattttggtctcttaactataaagtgtctcaattt 49122047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 2e-46; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 15445455 - 15445597
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||| ||||| ||| ||||| |||||||| |||| || |||||||||||||||||||    
T  15445455 taacttatttttggatttcattttggtcccctaattataaagtgtctcaatttggtctcttatgtcttttgccgttatcttttttggtcctatccgttac 15445554  T
Q  101 attttaaccataaatgtctaaggtgtaacagcattgcaggtgg 143  Q
    ||||||||||||||||||| | ||||||||||||||| |||||    
T  15445555 attttaaccataaatgtcttatgtgtaacagcattgctggtgg 15445597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 44690952 - 44690846
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| ||||||||||||||| |||||| |||||||||||| ||||||||||||||| ||||||| | ||||||||||||||||||| ||||||    
T  44690952 taacttattttcggatttcattttggttccataactataaaatgtctcaatttagtcccttatgtcttttgttattacctcttttggtcctattcgttac 44690853  T
Q  101 attttaa 107  Q
    |||||||    
T  44690852 attttaa 44690846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 2310879 - 2310772
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| | |||||||||||||||| ||| |||||||||||| ||||| ||||||||| |||||||| ||||||||||||| |||||||||||||    
T  2310879 taacttattttcgaatttcattttggtcccctaactataaaatgtctcaatttggtcccttatgtcttttgccgttacctcttttgatcctatccgttac 2310780  T
Q  101 attttaac 108  Q
    ||||||||    
T  2310779 attttaac 2310772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 29833391 - 29833489
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||| ||||| ||||||||| |||||||  |||||||||||||||||| |||||||    
T  29833391 taacttattttcggatttcattttggtcccctaattataaaatgtctcaatttggtcccttatatcttttgtcgttacctcttttggtcctctccgtta 29833489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 30671013 - 30671120
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||||||| ||||| |||||||  ||||||||||||| |||||||| ||||    
T  30671013 taacttattttcggatttcattttggtcccttaactataaagtgtctcaatttagtctcttatatcttttgtcgttacctcttttgatcctatccattac 30671112  T
Q  101 attttaac 108  Q
    ||||||||    
T  30671113 attttaac 30671120  T

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Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 2309867 - 2309970
Alignment:
Q  5 ttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattt 104  Q
    |||||||||||||||||||||||| |||||||||||| ||| | |||||  |||||||| |||||| | |||||| |||||||||| |||||||||||||    
T  2309867 ttatttttggatttcattttggtctcataattataaagtgtttcaatttgatcccttatgtcttttaccgttaccacttttggtcccatccgttacattt 2309966  T
Q  105 taac 108  Q
    ||||    
T  2309967 taac 2309970  T

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Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 52880832 - 52880939
Alignment:
Q  1 taacttatttttggatttc-attttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    ||||||||||| ||||||  ||||||||||| ||| |||||| ||||| ||||| |||| |||| |||||||| ||||||||||||||||||||||||||    
T  52880832 taacttattttcggatttttattttggtcccctaactataaagtgtctcaatttggtcctttatgtcttttgccgttacctcttttggtcctatccgtta 52880931  T
Q  100 cattttaa 107  Q
    ||||||||    
T  52880932 cattttaa 52880939  T

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Target: chr4; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 53401548 - 53401458
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctat 93  Q
    |||||||||||||||||| ||||| ||||||||| |||||| ||||| ||||| |||||||||||||||||| ||||  ||||||||||||||    
T  53401548 taacttatttttggattttattttagtcccataactataaactgtctcaatttggtcccttatttcttttgccgtta--tcttttggtcctat 53401458  T

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Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 19049969 - 19049877
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctat 93  Q
    ||||||||||||||||||||||||| |||| |||||||||| ||||| ||||| ||||||||| |||||||   |||||||||||||| ||||    
T  19049969 taacttatttttggatttcattttgatcccctaattataaagtgtctcaatttggtcccttatgtcttttgtcattacctcttttggtgctat 19049877  T

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Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 52882023 - 52881920
Alignment:
Q  5 ttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattt 104  Q
    |||||||||||||| ||||||||||| | | |||||| ||||| ||||  ||||||||| || ||||  |||||||||||||||| ||||||||||||||    
T  52882023 ttatttttggattttattttggtcccctgactataaagtgtctcaattaggtcccttatgtcatttgtcgttacctcttttggtcatatccgttacattt 52881924  T
Q  105 taac 108  Q
    ||||    
T  52881923 taac 52881920  T

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Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 248
Target Start/End: Complemental strand, 53401384 - 53401318
Alignment:
Q  186 caaatagaaaaccgttggatcatgtaggtctattgta----acggtgaataattaacacctaatttt 248  Q
    |||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||    
T  53401384 caaatagaaaaccgttggatcatgtaggtctattgtaacatacggtgaataattaacacctaatttt 53401318  T

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Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 526812 - 526718
Alignment:
Q  5 ttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    ||||||| |||||||||||||||||| ||| |||||| ||||| || || ||||||||| || | || ||||||||||||||||||| |||||||    
T  526812 ttattttcggatttcattttggtcccctaactataaagtgtctcaacttggtcccttatgtcatctgatgttacctcttttggtcctctccgtta 526718  T

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Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 29686275 - 29686373
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    |||||||||||||| ||||| ||||||||| ||| |||||| ||||| || || ||||||||| |||| ||  |||||||||||||||||| |||||||    
T  29686275 taacttatttttggttttcactttggtcccttaactataaattgtctcaaattggtcccttatgtcttatgtcgttacctcttttggtcctctccgtta 29686373  T

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Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 30672161 - 30672071
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcct 91  Q
    ||||||||||| |||||||||||||||||| ||| | |||| ||||| ||||| ||||||||| |||| ||| ||||||| ||||||||||    
T  30672161 taacttattttcggatttcattttggtcccgtaactttaaagtgtctcaatttggtcccttatgtcttctgccgttacctgttttggtcct 30672071  T

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Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 43894124 - 43894221
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtt 98  Q
    |||||||||||||| ||||| ||||||||| ||| |||||||||||| ||||| ||| | ||  | |||| |||||||||||||||||| ||||||||    
T  43894124 taacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcacataactatttttctgttacctcttttggtcatatccgtt 43894221  T

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Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 12396971 - 12396891
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctc 81  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||| ||||||||| ||| |||| ||||||||    
T  12396971 taacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtctattgccgttacctc 12396891  T

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Target: chr4; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 49 - 108
Target Start/End: Original strand, 19048942 - 19049001
Alignment:
Q  49 aatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattttaac 108  Q
    ||||| ||||||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  19048942 aatttggtcccttatgtcttttgccgttatctcttttggtcctatccgttacattttaac 19049001  T

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Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 936235 - 936333
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    |||||||||||||||||| ||||||||||| ||| |||||| | | |||||||  |||||||| |||| || |||||||||||||| || | |||||||    
T  936235 taacttatttttggattttattttggtcccttaactataaagtattttaatttgatcccttatgtcttctgttgttacctcttttgatcatctccgtta 936333  T

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Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 937191 - 937125
Alignment:
Q  5 ttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttg 71  Q
    ||||||| |||||||||||||||||| ||| |||||| ||||| ||||||||||||||| |||||||    
T  937191 ttattttcggatttcattttggtcccctaactataaagtgtctcaatttagtcccttatgtcttttg 937125  T

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Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 28103583 - 28103525
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||||||||||||||||||| ||| |||||| ||||| ||||| |||||    
T  28103583 taacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtccc 28103525  T

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Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 53151632 - 53151540
Alignment:
Q  39 aaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattttaaccataaatgtctaaggtgtaacagc 132  Q
    |||| ||||||| || ||||||||| |||||||  ||||||||||| | ||||||| ||||  ||||||||||||||||||||| |||| ||||    
T  53151632 aaaacgtcttaaattggtcccttatctcttttgtcgttacctcttt-gatcctatcggttagtttttaaccataaatgtctaagatgtagcagc 53151540  T

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Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 53400204 - 53400261
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcc 58  Q
    |||||||||||| ||||||||||||||||||||| |||||| ||||| ||||| ||||    
T  53400204 taacttatttttagatttcattttggtcccataactataaagtgtctcaatttggtcc 53400261  T

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Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 29834529 - 29834441
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtc 89  Q
    ||||||||||| ||||||||||||| |||| ||| |||||  | ||| |||||  |||||||| |||| ||| ||||||||||||||||    
T  29834529 taacttattttcggatttcattttgatcccctaactataatgtatctcaatttgatcccttatgtcttctgccgttacctcttttggtc 29834441  T

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Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 108
Target Start/End: Complemental strand, 12391892 - 12391858
Alignment:
Q  74 gttacctcttttggtcctatccgttacattttaac 108  Q
    |||||||||||||||||||||||||||||||||||    
T  12391892 gttacctcttttggtcctatccgttacattttaac 12391858  T

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Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 26791521 - 26791460
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttat 63  Q
    |||||||||||||||||| ||||| ||||| |||||||||| ||||| ||||| |||||||||    
T  26791521 taacttatttttggattttattttagtccc-taattataaagtgtctcaatttggtcccttat 26791460  T

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Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 37559017 - 37559075
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||| ||||| ||||||||| ||| |||||||||||| ||||| |||||    
T  37559017 taacttatttttggttttcaatttggtcccctaactataaaatgtctcaatttggtccc 37559075  T

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Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 55953949 - 55953891
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||  ||||| ||||||||||||| |||||||||||| ||||| |||||    
T  55953949 taacttatttttgattttcaatttggtcccataactataaaatgtctcaatttggtccc 55953891  T

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Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 15445649 - 15445707
Alignment:
Q  186 caaatagaaaaccgttggatcatgtaggtctattgta----acggtgaataattaacac 240  Q
    ||||||||||||||||||||||||||||| |||||||    ||||||||| ||||||||    
T  15445649 caaatagaaaaccgttggatcatgtaggtttattgtagcatacggtgaatgattaacac 15445707  T

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Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 248
Target Start/End: Original strand, 19049025 - 19049083
Alignment:
Q  194 aaaccgttggatcatgtaggtctattgta----acggtgaataattaacacctaatttt 248  Q
    ||||||||||||||||||||| |||||||    ||||||||| ||||||||||||||||    
T  19049025 aaaccgttggatcatgtaggtttattgtagcctacggtgaatgattaacacctaatttt 19049083  T

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Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 30682739 - 30682791
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||| | ||||||||||||||| ||| |||||| |||||||||||    
T  30682739 taacttatttttagttttcattttggtcccttaactataaagtgtcttaattt 30682791  T

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Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 31711111 - 31711163
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||||||||||||||||||||  ||| |||||| ||||| |||||    
T  31711111 taacttatttttggatttcattttggtcctttaactataaagtgtctcaattt 31711163  T

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Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 36604915 - 36604840
Alignment:
Q  24 tggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    ||||||| ||| || |||| ||||||| || ||||||||| |||| | | |||||||||||||||||| |||||||    
T  36604915 tggtcccctaactaaaaaacgtcttaaattggtcccttatgtcttcttccgttacctcttttggtcctctccgtta 36604840  T

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Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 43419447 - 43419348
Alignment:
Q  26 gtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattttaaccataaatgtctaaggtg 125  Q
    ||||| ||| |||||| ||||| ||||| ||||||||  |||| ||| ||||||| ||||||||   | |||||  |||||||||||||||| |||||||    
T  43419447 gtcccttaactataaagtgtctcaatttggtcccttaactcttctgccgttacctattttggtctatttcgttagtttttaaccataaatgtataaggtg 43419348  T

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Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 96778 - 96708
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttg 71  Q
    |||||||||||  | ||||| ||||||||| ||| |||||| |||||||| || ||||||||| |||||||    
T  96778 taacttattttatgttttcactttggtcccctaactataaagtgtcttaaattggtcccttatgtcttttg 96708  T

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Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 15446767 - 15446709
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    ||||||||||||||||||||||||||||   |||||||||| ||| | ||||| |||||    
T  15446767 taacttatttttggatttcattttggtcatctaattataaagtgtttcaatttggtccc 15446709  T

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Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 26202483 - 26202425
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    ||||||||||||| |||||||||||||||| ||| | |||| ||||| ||||| |||||    
T  26202483 taacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtccc 26202425  T

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Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 26788541 - 26788639
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    |||||||||||| | ||||| |||||||| |||| |||||||| ||| ||||| ||||| ||  |||| ||| |||  || |||||||||| |||||||    
T  26788541 taacttatttttagttttcactttggtcctataagtataaaatatctcaatttcgtcccataaatcttctgccgtttactattttggtcctctccgtta 26788639  T

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Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 30441628 - 30441686
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    ||||||||||||| |||||| ||||||||| ||| | |||| ||||| |||||||||||    
T  30441628 taacttatttttgaatttcaatttggtcccctaaatttaaactgtctcaatttagtccc 30441686  T

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Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 30683120 - 30683010
Alignment:
Q  5 ttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattt 104  Q
    |||||||||  ||||||||||||||| ||| |||||| ||||| ||||| ||||| ||  ||||  || ||||  |||||||||| | |||||||  |||    
T  30683120 ttatttttgattttcattttggtcccttaactataaagtgtctcaatttggtcccataaatcttcggccgttaattcttttggtcttctccgttagtttt 30683021  T
Q  105 taaccataaat 115  Q
    |||| ||||||    
T  30683020 taacaataaat 30683010  T

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Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 33377461 - 33377363
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    |||||||||||||  ||||| ||||||||| ||| |||||| ||||| ||||| ||||| ||  |||| ||| |||  || |||||||||| |||||||    
T  33377461 taacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcctctccgtta 33377363  T

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Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 37560396 - 37560338
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||| ||||| ||||||||| ||| |||||| ||||| ||||| |||||    
T  37560396 taacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtccc 37560338  T

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Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 44128431 - 44128333
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    ||||||||||||   ||||| ||||||||| ||| |||||| ||||| |||||||||| |||  |||| ||| |||  || |||||||||| |||||||    
T  44128431 taacttatttttcattttcaatttggtcccctaactataaagtgtctcaatttagtcctttaaatcttatgccgtttactattttggtcctctccgtta 44128333  T

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Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 46796123 - 46796065
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||| ||| ||||||||||| ||| |||||| ||||| ||||| |||||    
T  46796123 taacttatttttggttttaattttggtcccctaactataaagtgtctcaatttggtccc 46796065  T

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Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8510874 - 8510935
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccctta 62  Q
    ||||||||||||| |||||| ||||||||| ||| | |||| ||||| ||||| ||||||||    
T  8510874 taacttatttttgaatttcaatttggtcccttaactttaaattgtctcaatttggtccctta 8510935  T

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Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 8516949 - 8516888
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccctta 62  Q
    ||||||||||||| |||||| ||||||||| ||| | |||| ||||| ||||| ||||||||    
T  8516949 taacttatttttgaatttcaatttggtcccttaactttaaattgtctcaatttggtccctta 8516888  T

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Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 12391834 - 12391776
Alignment:
Q  194 aaaccgttggatcatgtaggtctattgta----acggtgaataattaacacctaatttt 248  Q
    ||||||||||||||||||||| |||||||    ||||||||| |||||||||| |||||    
T  12391834 aaaccgttggatcatgtaggtttattgtagcctacggtgaatgattaacacctgatttt 12391776  T

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Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 28370485 - 28370538
Alignment:
Q  5 ttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcc 58  Q
    ||||||||| |||||| ||||||||| ||||| |||| ||||||||||| ||||    
T  28370485 ttatttttgaatttcaatttggtcccttaattttaaactgtcttaatttggtcc 28370538  T

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Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 56000306 - 56000363
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcc 58  Q
    |||||||||||||  |||||||||| |||| ||| |||||| ||||| ||||||||||    
T  56000306 taacttatttttgattttcattttgatcccctaactataaagtgtctcaatttagtcc 56000363  T

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Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 10403298 - 10403350
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||||| ||| | ||||||||| ||| |||||| |||||||||||    
T  10403298 taacttatttttggtttttactttggtcccctaactataaagtgtcttaattt 10403350  T

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Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 15317721 - 15317773
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    ||||||||||||| |||||||||||||||| ||| | |||| ||||| |||||    
T  15317721 taacttatttttgaatttcattttggtcccttaactttaaactgtctcaattt 15317773  T

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Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 17494163 - 17494275
Alignment:
Q  18 tcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattttaaccataaatgt 117  Q
    ||||||||||||| ||| ||| || ||| ||||||| ||| ||||| |||| ||| |||  || | |||||  | |||||||| |||||||| |||||||    
T  17494163 tcattttggtcccttaactattaagtgttttaatttggtctcttatgtcttatgccgtttactatattggttatctccgttactttttaaccttaaatgt 17494262  T
Q  118 ctaaggtgtaaca 130  Q
    |||| ||| ||||    
T  17494263 ctaacgtgaaaca 17494275  T

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Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 48207814 - 48207762
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||| | ||||||||||||| | |||||||||| ||||| |||||    
T  48207814 taacttattttttgttttcattttggtctcctaattataaagtgtctcaattt 48207762  T

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Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 56297776 - 56297724
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    ||||||||||||| ||||||||||| |||| ||||| |||| ||||| |||||    
T  56297776 taacttatttttgaatttcattttgatcccttaattttaaactgtctcaattt 56297724  T

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Target: chr8 (Bit Score: 91; Significance: 6e-44; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 45384259 - 45384401
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||||| |||||||||| |||| |||| |||||||||||| |||||  |||||||| | |||||||||||||| |||||||| ||||||||||    
T  45384259 taacttatttttgaatttcattttagtcctataactataaaatgtctcaatttgatcccttatgttttttgctgttacctattttggtcatatccgttac 45384358  T
Q  101 attttaaccataaatgtctaaggtgtaacagcattgcaggtgg 143  Q
    ||||||||||||||| |||||||||||||| ||||||||||||    
T  45384359 attttaaccataaatatctaaggtgtaacaacattgcaggtgg 45384401  T

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Target: chr8; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 6844670 - 6844563
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| ||||||||||||||| || |||  ||||| ||||| ||||| ||||||||| | |||||| |||| ||||||||||||||||| ||||    
T  6844670 taacttattttcggatttcattttggttccctaacaataaagtgtctcaatttggtcccttatgttttttgccgttatctcttttggtcctatccattac 6844571  T
Q  101 attttaac 108  Q
    ||||||||    
T  6844570 attttaac 6844563  T

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Target: chr8; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 35943926 - 35944051
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattat-aaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    |||||||||||||| ||||||||||||||| ||||||| ||||||||| ||||| ||||| ||  |||| ||| |||  || |||||||| | |||||||    
T  35943926 taacttatttttggttttcattttggtcccttaattataaaaatgtctcaatttggtcccataaatcttatgcagtttactattttggtcatctccgtta 35944025  T
Q  100 cattttaaccataaatgtctaaggtg 125  Q
      |||||||  |||||||||||||||    
T  35944026 gtttttaactttaaatgtctaaggtg 35944051  T

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Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 10053841 - 10053743
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    |||||||||||||| ||||| ||||||||| ||| |||||| ||||| || || ||||||||| |||| ||  ||||||||||||||| || |||||||    
T  10053841 taacttatttttggttttcactttggtcccttaactataaagtgtctcaagttggtcccttatgtcttatgtcgttacctcttttggttctctccgtta 10053743  T

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Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 31625481 - 31625383
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    |||||||||||||| ||||| ||||||||| |||||||||| ||||| ||||| ||||| ||  |||||||| |||  || |||||||||| |||||||    
T  31625481 taacttatttttggttttcaatttggtcccctaattataaagtgtctcaatttggtcccataaatcttttgccgtttactattttggtcctctccgtta 31625383  T

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Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 10052123 - 10052244
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||| |||  ||||| ||||||||| |||||||||| ||||| || || ||||||||| || | ||| |||||||||||||||| | ||| |||     
T  10052123 taacttattcttgattttcactttggtcccctaattataaagtgtctcaaattggtcccttatgtcatctgccgttacctcttttggtcatctcctttag 10052222  T
Q  101 attttaaccataaatgtctaag 122  Q
     |||||||  ||||||||||||    
T  10052223 tttttaacattaaatgtctaag 10052244  T

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Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 45385891 - 45385851
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  45385891 taacttatttttggatttcattttggtcccataattataaa 45385851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 13367132 - 13367023
Alignment:
Q  16 tttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattttaaccataaat 115  Q
    ||||| ||||||||| ||| |||||| ||| ||||||| ||||| ||  |||| ||| |||  || |||||||||| |||||||  |||||||| |||||    
T  13367132 tttcactttggtcccttaactataaagtgttttaatttggtcccataaatcttctgccgtttactattttggtcctctccgttagtttttaaccttaaat 13367033  T
Q  116 gtctaaggtg 125  Q
    ||||||||||    
T  13367032 gtctaaggtg 13367023  T

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Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 117067 - 117111
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgt 45  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||    
T  117067 taacttatttttggttttcattttggtcccctaattataaaatgt 117111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 6843774 - 6843864
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttg--ctgttacctcttttggtc 89  Q
    ||||||||||| |||||| ||||||||||| ||| |||||| ||||| ||||| ||||| ||| |||| ||   |||||||||||||||||    
T  6843774 taacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtcccctatatcttctgtcgtgttacctcttttggtc 6843864  T

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Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 14820212 - 14820270
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||||||| | ||||||||| ||| |||||| ||||| |||||||||||    
T  14820212 taacttatttttggattttaatttggtcccctaactataaagtgtctcaatttagtccc 14820270  T

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Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 24068349 - 24068407
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||| ||||||||||||||| ||| |||||| ||||| ||||| |||||    
T  24068349 taacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtccc 24068407  T

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Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 37274906 - 37275004
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    |||||||||||||||||||||||||||||  ||| |||||| ||||| |||||  |||| ||  |||| ||| |||  || |||||||||| |||||||    
T  37274906 taacttatttttggatttcattttggtcctctaactataaagtgtctcaatttgttcccataaatcttctgccgtttactattttggtcctctccgtta 37275004  T

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Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 43386799 - 43386741
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||| ||||| ||||||||| ||| |||||||||||| ||||| |||||    
T  43386799 taacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtccc 43386741  T

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Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 24706309 - 24706248
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccctta 62  Q
    |||||||||||||||||||||||||||| | ||| | |||| |||||||| || ||||||||    
T  24706309 taacttatttttggatttcattttggtctcttaactttaaattgtcttaaattggtccctta 24706248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 7486100 - 7486216
Alignment:
Q  5 ttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattt 104  Q
    |||||||||| |||||||||| |||| ||| |||||| ||  | ||||| ||||| ||  ||||||||||||  || |||||||||| |||||||  |||    
T  7486100 ttatttttggttttcattttgatcccttaactataaagtgcttcaatttggtcccataaatcttttgctgtttactattttggtcctctccgttagtttt 7486199  T
Q  105 taaccataaatgtctaa 121  Q
    ||||   ||||||||||    
T  7486200 taacatcaaatgtctaa 7486216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 13513462 - 13513546
Alignment:
Q  24 tggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattttaac 108  Q
    ||||||| ||| || |||| |||| || || ||||||||| |||| | |||||||||||||||||||| |||||||  |||||||    
T  13513462 tggtcccctaactaaaaaacgtctcaaattggtcccttatgtcttcttctgttacctcttttggtcctctccgttagcttttaac 13513546  T

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Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 13602995 - 13603079
Alignment:
Q  24 tggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattttaac 108  Q
    ||||||| ||| || |||| |||| || || ||||||||| |||| | |||||||||||||||||||| |||||||  |||||||    
T  13602995 tggtcccctaactaaaaaacgtctcaaattggtcccttatgtcttcttctgttacctcttttggtcctctccgttagcttttaac 13603079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 24069543 - 24069419
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||||| |||||||||| |||| ||| |||||| ||||| ||||| ||||| ||  |||| ||| |||  |  |||||||||| |||||       
T  24069543 taacttatttttggttttcattttgatcccttaactataaagtgtctcaatttggtcccataactcttctgccgtttaccattttggtcctttccgtctg 24069444  T
Q  101 attttaaccataaatgtctaaggtg 125  Q
     |||||||  |||||||||||||||    
T  24069443 tttttaacactaaatgtctaaggtg 24069419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 38664443 - 38664514
Alignment:
Q  56 tcccttatttcttttgctgttacctcttttggtcctatccgtta-cattttaaccataaatgtctaaggtgt 126  Q
    |||||||| |||||| | ||||||||||||| || |||||||||   |||||||||||||||| ||||||||    
T  38664443 tcccttatgtcttttaccgttacctcttttgttcatatccgttagttttttaaccataaatgtataaggtgt 38664514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 13360372 - 13360434
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttat 63  Q
    |||||||||||| ||||||||||| ||||| |||||| |||| |||| || || |||||||||    
T  13360372 taacttatttttagatttcattttcgtcccctaattaaaaaacgtctcaaattggtcccttat 13360434  T

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Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 6844539 - 6844481
Alignment:
Q  194 aaaccgttggatcatgtaggtctattgta----acggtgaataattaacacctaatttt 248  Q
    ||||| ||||||||||||||| |||||||    ||||||||| ||||||||||||||||    
T  6844539 aaaccattggatcatgtaggtgtattgtagcctacggtgaatgattaacacctaatttt 6844481  T

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Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 7561818 - 7561879
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccctta 62  Q
    |||||||||||||||||||| ||||||||| ||| | |||| ||||| || || ||||||||    
T  7561818 taacttatttttggatttcaatttggtcccttaactttaaattgtctcaaattggtccctta 7561879  T

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Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 21553804 - 21553747
Alignment:
Q  2 aacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||| |||||||||||||||||||| | ||||  |||| ||||| |||||    
T  21553804 aacttatttttgaatttcattttggtcccataactttaaatcgtctcaatttggtccc 21553747  T

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Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 35945534 - 35945445
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcc 90  Q
    |||||||||||| | ||||||||| ||||| ||| |||||||||||| | ||| ||||| ||| |||| ||| |||  || |||||||||    
T  35945534 taacttattttttgttttcattttagtcccttaactataaaatgtctcactttggtcccatatatcttctgcagtttactattttggtcc 35945445  T

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Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 248
Target Start/End: Original strand, 38664583 - 38664649
Alignment:
Q  186 caaatagaaaaccgttggatcatgtaggtctattgta----acggtgaataattaacacctaatttt 248  Q
    ||||||||||| | ||||||||| || ||||||||||    ||||||||| ||||||||||||||||    
T  38664583 caaatagaaaatcattggatcatataagtctattgtagcctacggtgaatgattaacacctaatttt 38664649  T

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Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 7815066 - 7815114
Alignment:
Q  5 ttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||  ||||||||||||||  |||||||||||||||| |||||    
T  7815066 ttatttttgattttcattttggtcctctaattataaaatgtctcaattt 7815114  T

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Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 16363909 - 16363785
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||||| ||||| ||||||||  ||| |||||| | ||| |||||  |||| ||  || | |||||||  || |||||||||| |||||||     
T  16363909 taacttatttttggttttcactttggtcctctaactataaagtatctcaatttgatcccataaatcgtctgctgtttactattttggtcctctccgttag 16363810  T
Q  101 attttaaccataaatgtctaaggtg 125  Q
     | |||||  |||||||||||||||    
T  16363809 ttattaactttaaatgtctaaggtg 16363785  T

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Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 24703228 - 24703256
Alignment:
Q  1 taacttatttttggatttcattttggtcc 29  Q
    |||||||||||||||||||||||||||||    
T  24703228 taacttatttttggatttcattttggtcc 24703256  T

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Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 36070201 - 36070321
Alignment:
Q  5 ttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattt 104  Q
    |||||||||| ||||| ||||||||| ||| |||||| ||||| |||||  |||| ||  |||| ||| |||  || ||||||||||  ||||||   ||    
T  36070201 ttatttttggttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaatcttctgccgtttactattttggtcctccccgttagtctt 36070300  T
Q  105 taaccataaatgtctaaggtg 125  Q
    | ||| |||||||||||||||    
T  36070301 tgaccttaaatgtctaaggtg 36070321  T

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Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 37324785 - 37324733
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||||| ||| | ||||||||| ||| |||||||||||| |||||    
T  37324785 taacttatttttggtttttaatttggtcccctaactataaaatgtctcaattt 37324733  T

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Target: chr6 (Bit Score: 76; Significance: 5e-35; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 8447240 - 8447347
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||| ||||||||| |||||||| |||||||||||||||||||||||||||    
T  8447240 taacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgccgttacctcttttggtcctatccgttac 8447339  T
Q  101 attttaac 108  Q
    ||||||||    
T  8447340 attttaac 8447347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 8456044 - 8456151
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||| ||||||||| |||||||| |||||||||||||||||||||||||||    
T  8456044 taacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgccgttacctcttttggtcctatccgttac 8456143  T
Q  101 attttaac 108  Q
    ||||||||    
T  8456144 attttaac 8456151  T

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Target: chr6; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 19367736 - 19367843
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| | |||||||||||||||| ||| |||||| ||||| ||||| ||||||||| ||||||| |||||||| |||||||| ||||||||||    
T  19367736 taacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgttgttaccttttttggtcatatccgttac 19367835  T
Q  101 attttaac 108  Q
    ||||||||    
T  19367836 attttaac 19367843  T

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Target: chr6; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 26584134 - 26584027
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||| ||||||||||| ||| |||||| ||||| ||||| || |||||| |||||||| |||||||||||||||| ||||||||||    
T  26584134 taacttattttcggattttattttggtcccctaactataaagtgtctcaatttggttccttatgtcttttgccgttacctcttttggtcgtatccgttac 26584035  T
Q  101 attttaac 108  Q
    ||||||||    
T  26584034 attttaac 26584027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 28226515 - 28226408
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||| |||||  ||||| || |||||||| ||||||||||||||||| |||||||||    
T  28226515 taacttattttcggatttcattttggtcccctaactataaagtgtctcaatttgatccctaatgtcttttgccgttacctcttttggtcccatccgttac 28226416  T
Q  101 attttaac 108  Q
    ||||||||    
T  28226415 attttaac 28226408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 26581972 - 26582077
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||||||||| ||||||||||| ||| |||||| || || ||||| ||||||||| |||||||  |||| ||||||||||||||||||||||    
T  26581972 taacttatttttggattttattttggtcccttaactataaagtgactcaatttggtcccttatatcttttgtcgtta-ctcttttggtcctatccgttac 26582070  T
Q  101 attttaa 107  Q
    |||||||    
T  26582071 attttaa 26582077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 18773673 - 18773763
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcct 91  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||| || | |  |||||||| ||||||||||    
T  18773673 taacttatttttggatttcattttggtcccctaattataaaatgtctcaatttggtcccttatgtcctctcgtgttaccttttttggtcct 18773763  T

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Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 13173056 - 13173162
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||| ||||||||||| ||| |||||| ||||| ||||| ||| ||||| | ||||  ||||||||||||||||| ||||||||||    
T  13173056 taacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtctcttatgttttttt-tgttacctcttttggtcgtatccgttac 13173154  T
Q  101 attttaac 108  Q
    ||||||||    
T  13173155 attttaac 13173162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 2138730 - 2138644
Alignment:
Q  5 ttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcct 91  Q
    |||||||||||||| ||||||||||| ||| |||||| ||||| ||||||||||||||| |||| ||  ||||||||||||||||||    
T  2138730 ttatttttggattttattttggtcccctaactataaagtgtctcaatttagtcccttatgtcttctgtcgttacctcttttggtcct 2138644  T

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Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 28225443 - 28225549
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| | |||||||||||||||| ||| |||||| ||||| ||||| ||||||||| |||||||  ||||  ||||||||||| ||||||| |    
T  28225443 taacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgtcgttatatcttttggtcccatccgttgc 28225542  T
Q  101 attttaa 107  Q
    |||||||    
T  28225543 attttaa 28225549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 13176424 - 13176323
Alignment:
Q  7 atttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacatttta 106  Q
    ||||| |||||| ||||| ||||| ||| |||||||||||| ||||| |||  |||| |||||||  |||||||||||||||| ||||| ||||||||||    
T  13176424 attttcggattttattttagtcccctaactataaaatgtctcaatttggtcttttatgtcttttgtcgttacctcttttggtcatatcccttacatttta 13176325  T
Q  107 ac 108  Q
    ||    
T  13176324 ac 13176323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 19368615 - 19368517
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    ||||||||||| |||||||||||||||||  ||| |||||| ||||| ||||| ||| ||||| |||| ||  |||||||||||| ||||| |||||||    
T  19368615 taacttattttcggatttcattttggtcctctaactataaagtgtctcaatttggtctcttatgtcttctgtcgttacctcttttagtcctctccgtta 19368517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 27440272 - 27440148
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||||| ||||||||||| |||| ||| | |||| ||||| ||||| ||||| ||  |||| | | |||  || |||||||||| |||||||     
T  27440272 taacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgtttactattttggtcctctccgttaa 27440173  T
Q  101 attttaaccataaatgtctaaggtg 125  Q
     |||||||  |||||||||||||||    
T  27440172 tttttaactttaaatgtctaaggtg 27440148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 31738382 - 31738502
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||||| ||||| ||||||||| ||| |||||| ||| | ||||| ||||| ||  |||| ||| |||  |  |||||||||| |||||||     
T  31738382 taacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataagtcttctgcggtttaccattttggtcctctccgttag 31738481  T
Q  101 attttaaccataaatgtctaa 121  Q
     |||||||| |||||||||||    
T  31738482 tttttaaccttaaatgtctaa 31738502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 14328850 - 14328747
Alignment:
Q  22 tttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattttaaccataaatgtctaa 121  Q
    |||| |||| ||| ||| || ||||||||||| ||| | || ||||||||  |||  || |||||||||| |||||||| |||||||| |||||||||||    
T  14328850 tttgatcccttaactattaagtgtcttaatttggtctcataattcttttgtcgtttactattttggtcctctccgttactttttaaccttaaatgtctaa 14328751  T
Q  122 ggtg 125  Q
    ||||    
T  14328750 ggtg 14328747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 14421860 - 14421757
Alignment:
Q  22 tttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattttaaccataaatgtctaa 121  Q
    |||| |||| ||| ||| || ||||||||||| ||| | || ||||||||  |||  || |||||||||| |||||||| |||||||| |||||||||||    
T  14421860 tttgatcccttaactattaagtgtcttaatttggtctcataattcttttgtcgtttactattttggtcctctccgttactttttaaccttaaatgtctaa 14421761  T
Q  122 ggtg 125  Q
    ||||    
T  14421760 ggtg 14421757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 27438809 - 27438861
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||||||||||||||||||||  ||| |||||| ||||| |||||    
T  27438809 taacttatttttggatttcattttggtcctttaactataaagtgtctcaattt 27438861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 33802114 - 33802062
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||||| ||||| ||||||||| ||| |||||| |||||||||||    
T  33802114 taacttatttttggttttcactttggtcccctaactataaagtgtcttaattt 33802062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 22300000 - 22299942
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||| ||||| ||||||||| ||| |||||| ||||| ||||| |||||    
T  22300000 taacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtccc 22299942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 26584003 - 26583945
Alignment:
Q  194 aaaccgttggatcatgtaggtctattgta----acggtgaataattaacacctaatttt 248  Q
    ||||||||||||||||||||| |||||||    ||||||||| |||||||||| |||||    
T  26584003 aaaccgttggatcatgtaggtttattgtagcctacggtgaatgattaacacctgatttt 26583945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 28226384 - 28226326
Alignment:
Q  194 aaaccgttggatcatgtaggtctattgta----acggtgaataattaacacctaatttt 248  Q
    ||||||||||||||||||||| |||||||    ||||||||| |||||||||| |||||    
T  28226384 aaaccgttggatcatgtaggtttattgtagcctacggtgaatgattaacacctgatttt 28226326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 31740369 - 31740272
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtt 98  Q
    |||||||||||| | ||||| ||||||||| ||| |||||| ||||| ||||| ||||| ||  |||| ||| |||  |  |||||||||||||||||    
T  31740369 taacttattttttgttttcaatttggtcccttaactataaagtgtctcaatttggtcccataaatcttatgccgtttaccattttggtcctatccgtt 31740272  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 17916566 - 17916514
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    ||||||||||||| |||||||||||||||| ||| | |||| ||||| |||||    
T  17916566 taacttatttttgaatttcattttggtcccttaactttaaactgtctcaattt 17916514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 33807708 - 33807760
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||||| ||||| ||||||||| ||| |||||| ||||| |||||    
T  33807708 taacttatttttggttttcactttggtcccttaactataaagtgtctcaattt 33807760  T

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Target: chr5 (Bit Score: 76; Significance: 5e-35; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 22650725 - 22650618
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||| ||||||||| |||||||| |||||||||||||||||||||||||||    
T  22650725 taacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgccgttacctcttttggtcctatccgttac 22650626  T
Q  101 attttaac 108  Q
    ||||||||    
T  22650625 attttaac 22650618  T

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Target: chr5; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 20991746 - 20991639
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||||||||||| ||| ||| |||||||||||| ||||| ||||||||| |||||||  |||||||||||||||||||||||||||    
T  20991746 taacttattttcggatttcattttggccccctaactataaaatgtctcaatttggtcccttatgtcttttgtcgttacctcttttggtcctatccgttac 20991647  T
Q  101 attttaac 108  Q
    ||||||||    
T  20991646 attttaac 20991639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 43 - 143
Target Start/End: Complemental strand, 11443668 - 11443568
Alignment:
Q  43 tgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattttaaccataaatgtctaaggtgtaacagcattgcaggtg 142  Q
    ||||| ||||| |||  |||| |||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||| |||    
T  11443668 tgtctcaatttggtcatttatgtcttttgccgttacctcttttgatcatatccgttacattttaaccataaatgtctaaggtgtaacaacattgcatgtg 11443569  T
Q  143 g 143  Q
    |    
T  11443568 g 11443568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 32521705 - 32521812
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||| ||||| ||||||||||| ||| |||||| ||||| |||||  ||| |||| |||||||| |||||||||||||||| ||||||||||    
T  32521705 taacttatttttagattttattttggtcccctaactataaagtgtctcaatttgatccattatgtcttttgccgttacctcttttggtcatatccgttac 32521804  T
Q  101 attttaac 108  Q
    ||||||||    
T  32521805 attttaac 32521812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 4568071 - 4567964
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||| ||||||||| |||| |||  |||||| |||||||| | ||||||||    
T  4568071 taacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgcctttacctattttggtcatctccgttac 4567972  T
Q  101 attttaac 108  Q
    ||||||||    
T  4567971 attttaac 4567964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 15509214 - 15509320
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||| ||||||||||| ||| |||||| ||||| ||||| ||||||||| |||| ||| ||||||| |||||||||| |||||||     
T  15509214 taacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctattttggtcctctccgttat 15509313  T
Q  101 attttaa 107  Q
    |||||||    
T  15509314 attttaa 15509320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 20988709 - 20988807
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    ||||||||||| | |||||||||||||||| ||| |||||| ||||| ||||||||| ||||| |||| ||| |||||||||||||||||| |||||||    
T  20988709 taacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttagtctcttatgtcttgtgccgttacctcttttggtcctctccgtta 20988807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 21387656 - 21387763
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||||| |||||||||||||||| ||| |||||||||||| ||||| ||||| ||  |||| ||| |||||||||||||||||| || ||||     
T  21387656 taacttatttttgaatttcattttggtcccctaactataaaatgtctcaatttggtcccataaatcttctgccgttacctcttttggtcctgtctgttag 21387755  T
Q  101 attttaac 108  Q
     |||||||    
T  21387756 tttttaac 21387763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 15510360 - 15510270
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcct 91  Q
    ||||||||||| ||||||||||||| |||| ||| |||||| ||||| ||||| ||||||||| |||| ||| ||||||||||||||||||    
T  15510360 taacttattttcggatttcattttgatcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcct 15510270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 32522015 - 32521922
Alignment:
Q  5 ttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtt 98  Q
    ||||||| |||||||||||||||||| ||| |||| | ||||| ||||| ||||||| | |||||||  |||||||||||||||||||||||||    
T  32522015 ttattttcggatttcattttggtcccctaactatagagtgtctcaatttggtcccttgtgtcttttgtcgttacctcttttggtcctatccgtt 32521922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 41905194 - 41905292
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    |||||||||||||| ||||||||||||||| ||| |||||||||||||||  | ||||||||| |||| | | || |||||||||| |||| |||||||    
T  41905194 taacttatttttggttttcattttggtcccctaactataaaatgtcttaaactggtcccttatgtcttctaccgtcacctcttttgatcctctccgtta 41905292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 5061047 - 5061109
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttat 63  Q
    |||||||||||||||||||||||||||||| |||| ||||| ||||| ||||| |||||||||    
T  5061047 taacttatttttggatttcattttggtcccctaatgataaagtgtctcaatttggtcccttat 5061109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 4566970 - 4567058
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtc 89  Q
    |||| |||||| ||||||||||||| |||| ||| |||||| ||||| ||||| ||||||||| |||| ||  ||||||||||||||||    
T  4566970 taacatattttcggatttcattttgatcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtc 4567058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 18693717 - 18693824
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||||| |||| ||||||||||| ||| |||||||||||| ||| | ||||| ||  |||| ||  |||||||||||||||||| || ||||     
T  18693717 taacttatttttgaattttattttggtcccttaactataaaatgtctcaatctggtcccataaatcttctgtcgttacctcttttggtcctctctgttag 18693816  T
Q  101 attttaac 108  Q
     |||||||    
T  18693817 tttttaac 18693824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 5062283 - 5062221
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttat 63  Q
    ||||||||||||| |||||||||||||||| |||| ||||| ||||| ||||| |||||||||    
T  5062283 taacttatttttgaatttcattttggtcccctaatgataaagtgtctcaatttggtcccttat 5062221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 19827237 - 19827179
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||| ||||| |||||||||||||||||||| ||||| ||||| |||||    
T  19827237 taacttatttttggttttcaatttggtcccataattataaagtgtctcaatttggtccc 19827179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1273437 - 1273385
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||||| ||||||||||||||| |||||||||| ||||| |||||    
T  1273437 taacttatttttggttttcattttggtcccttaattataaagtgtctcaattt 1273385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 5382961 - 5383085
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||||| ||||  ||||||| | |||||||||| ||||| ||||| ||||| ||  ||||| |  |||  || ||||| |||| |||||||     
T  5382961 taacttatttttggttttctatttggtctcctaattataaagtgtctcaatttggtcccataaatctttggtcgtttactattttgatcctctccgttag 5383060  T
Q  101 attttaaccataaatgtctaaggtg 125  Q
     |||||||| |||||||||||||||    
T  5383061 tttttaaccttaaatgtctaaggtg 5383085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 7345487 - 7345397
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcct 91  Q
    ||||||||||||| |||||||||||||||  ||| |||||| ||||| ||||| ||||| ||  | |||||  |||| |||||||||||||    
T  7345487 taacttatttttgaatttcattttggtcctctaactataaagtgtctcaatttggtcccataaatattttgtcgttatctcttttggtcct 7345397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 12936199 - 12936142
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcc 58  Q
    |||||||||||||| ||||||||||||||| ||| |||||| ||||| ||||| ||||    
T  12936199 taacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcc 12936142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 1273112 - 1273166
Alignment:
Q  5 ttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||| ||||||||||||||  ||| |||||||||||| ||||| |||||    
T  1273112 ttatttttggttttcattttggtcctttaactataaaatgtctcaatttggtccc 1273166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 15613524 - 15613582
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    ||||||||||||||||||||||||||||   ||| |||||| ||||| ||||| |||||    
T  15613524 taacttatttttggatttcattttggtcttctaactataaagtgtctcaatttggtccc 15613582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 19050768 - 19050826
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||||||||| ||||||||| ||| | |||| ||||| ||||| |||||    
T  19050768 taacttatttttggatttcaatttggtcccctaactttaaactgtctcaatttggtccc 19050826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 37371076 - 37371134
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    ||||||||||||| |||||||||||||||| ||| | |||| ||||| ||||| |||||    
T  37371076 taacttatttttgaatttcattttggtcccttaactttaaattgtctcaatttggtccc 37371134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 37371280 - 37371222
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    ||||||||||||| |||||||||||||||| ||| ||||||  |||| ||||| |||||    
T  37371280 taacttatttttgaatttcattttggtcccttaactataaaccgtctcaatttggtccc 37371222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 1663206 - 1663263
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcc 58  Q
    |||||||||||||||||||| |||| |||  ||| |||||| ||||||||||| ||||    
T  1663206 taacttatttttggatttcactttgatccattaactataaagtgtcttaatttggtcc 1663263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 6914734 - 6914767
Alignment:
Q  1 taacttatttttggatttcattttggtcccataa 34  Q
    ||||||||||||| ||||||||||||||||||||    
T  6914734 taacttatttttgaatttcattttggtcccataa 6914767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 12950357 - 12950300
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcc 58  Q
    |||||||||| ||| ||||||||||||||| ||| |||||| ||||| ||||| ||||    
T  12950357 taacttatttatggttttcattttggtcccctaactataaagtgtctcaatttggtcc 12950300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12952130 - 12952069
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccctta 62  Q
    ||||||||||||| |||||||||||||||| ||| | ||||  |||| ||||| ||||||||    
T  12952130 taacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtccctta 12952069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 15615054 - 15615005
Alignment:
Q  4 cttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    ||||||||||||||||||||||||||  ||| |||||| ||||| |||||    
T  15615054 cttatttttggatttcattttggtccgctaactataaagtgtctcaattt 15615005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 26912435 - 26912378
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcc 58  Q
    |||||||||||| | ||||||||||||  | |||||||||| || |||||||||||||    
T  26912435 taacttattttttgttttcattttggtttcctaattataaagtgacttaatttagtcc 26912378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32411983 - 32412044
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccctta 62  Q
    |||||||||||||||||||| ||||||||| ||| | |||| ||||| || || ||||||||    
T  32411983 taacttatttttggatttcaatttggtcccttaactttaaattgtctcaaattggtccctta 32412044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 42979471 - 42979564
Alignment:
Q  5 ttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtt 98  Q
    |||||||||||||||||||||||||  ||| |||||| ||| | ||||| ||||  || ||||| ||| |||  || |||||||||| ||||||    
T  42979471 ttatttttggatttcattttggtcctctaactataaagtgtttcaatttggtccaataattcttctgccgtttactattttggtcctctccgtt 42979564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12933770 - 12933822
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||||| |||||||||| |||| ||| |||||| ||||| |||||    
T  12933770 taacttatttttggttttcattttgatcccctaactataaagtgtctcaattt 12933822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19524002 - 19524054
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||||| ||||| ||||||||| ||| |||||| ||||| |||||    
T  19524002 taacttatttttggttttcaatttggtcccttaactataaagtgtctcaattt 19524054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21306610 - 21306650
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaa 41  Q
    ||||||||||||| |||||||||||||| ||||||| ||||    
T  21306610 taacttatttttgaatttcattttggtctcataattttaaa 21306650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21314448 - 21314488
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaa 41  Q
    ||||||||||||| |||||||||||||| ||||||| ||||    
T  21314448 taacttatttttgaatttcattttggtctcataattttaaa 21314488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 42980802 - 42980754
Alignment:
Q  5 ttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||| |||||||||||||||| |||| |||||| ||||| |||||    
T  42980802 ttatttttagatttcattttggtcctataactataaagtgtctcaattt 42980754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 2e-34; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 1061549 - 1061443
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||||||||||||||| ||||| ||| |||||| ||||||||||| ||| ||||| |||||||| |||||||||||||||||||||||||||    
T  1061549 taacttatttttggatttcattttagtcccctaactataaagtgtcttaatttggtcacttatgtcttttgccgttacctcttttggtcctatccgttac 1061450  T
Q  101 attttaa 107  Q
    |||||||    
T  1061449 attttaa 1061443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 35683074 - 35683181
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||| ||||||||| |||| ||| |||||||||||||||||| ||||||||    
T  35683074 taacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcctctccgttac 35683173  T
Q  101 attttaac 108  Q
    ||||||||    
T  35683174 attttaac 35683181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 48934260 - 48934367
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||| ||||||||| ||| |||  |||||||||||||||||||||||||||    
T  48934260 taacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtctattgacgttacctcttttggtcctatccgttac 48934359  T
Q  101 attttaac 108  Q
    ||||||||    
T  48934360 attttaac 48934367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 1872960 - 1873063
Alignment:
Q  5 ttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattt 104  Q
    ||||||| |||||||||||||||| | |||||| ||| ||||||||||| ||||||||| |||||||| ||||||||||||||||| ||| |||| ||||    
T  1872960 ttattttcggatttcattttggtctcctaattaaaaagtgtcttaatttggtcccttatgtcttttgccgttacctcttttggtcccatctgttatattt 1873059  T
Q  105 taac 108  Q
    ||||    
T  1873060 taac 1873063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 2236832 - 2236939
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||| ||||||||| |||| ||  ||||||||||||| |||| ||||||||    
T  2236832 taacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttgatcctctccgttac 2236931  T
Q  101 attttaac 108  Q
    ||||||||    
T  2236932 attttaac 2236939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 14312794 - 14312901
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||||||||| ||||||||| | ||  |||||| ||||| ||||| ||||||||| |||||||   ||||||||||||||||||||||||||    
T  14312794 taacttatttttggattttattttggtctcctagctataaagtgtctcaatttggtcccttatgtcttttgtcattacctcttttggtcctatccgttac 14312893  T
Q  101 attttaac 108  Q
    ||||||||    
T  14312894 attttaac 14312901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 34532799 - 34532692
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| | |||| ||||||||||| ||| |||||| ||||| ||||| ||||||||| |||||||| ||||||||||||||  |||||||||||    
T  34532799 taacttattttcgaattttattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgccgttacctcttttgggtctatccgttac 34532700  T
Q  101 attttaac 108  Q
    ||||||||    
T  34532699 attttaac 34532692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 2238075 - 2237977
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    ||||||||||| |||||||||||||||||||||| |||||| ||||| ||||| ||||||||| |||| ||  |||||||||||||||||| |||||||    
T  2238075 taacttattttcggatttcattttggtcccataactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctccgtta 2237977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 48935207 - 48935109
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||| ||||||||| |||| ||| |||||||||||||||| | |||||||    
T  48935207 taacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcatctccgtta 48935109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 9119821 - 9119928
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||| | ||||||||  ||| |||||| ||||| ||||| |||| |||| |||||||  |||||||||||||||||||||| ||||    
T  9119821 taacttattttcggattttaatttggtcctctaactataaagtgtctcaatttggtccgttatgtcttttgtcgttacctcttttggtcctatcctttac 9119920  T
Q  101 attttaac 108  Q
    ||||||||    
T  9119921 attttaac 9119928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 42244523 - 42244628
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttat-ttcttttgctgttacctcttttggtcctatccgtta 99  Q
    ||||||||||||||||||||||||||||  |||| |||||||||||| |||||  |||||||| || |||||| ||||||| ||||| || ||||| |||    
T  42244523 taacttatttttggatttcattttggtcatataactataaaatgtctcaatttgatcccttatgtttttttgccgttacctattttgatcttatccatta 42244622  T
Q  100 catttt 105  Q
    ||||||    
T  42244623 catttt 42244628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 1873951 - 1873848
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||   |||| ||||||||||| ||| |||||| ||||| |||||  |||||||| |||||||| ||||||| ||||||||| |||||||||    
T  1873951 taacttattttcaaattttattttggtcccctaactataaagtgtctcaatttgatcccttatgtcttttgccgttaccttttttggtcccatccgttac 1873852  T
Q  101 attt 104  Q
    ||||    
T  1873851 attt 1873848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 9123496 - 9123389
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||| ||||||||||| ||| |||||| ||| | ||||| | || |||| |||||||  |||||||||||| ||||||| ||||||    
T  9123496 taacttattttcggattttattttggtcccttaactataaagtgtttcaatttggaccgttatgtcttttgtcgttacctctttttgtcctattcgttac 9123397  T
Q  101 attttaac 108  Q
    ||||||||    
T  9123396 attttaac 9123389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 26056244 - 26056137
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||||||||||||||||||||| ||| |||||| ||||| ||||| ||||| ||  |||||||  |||  || |||||||||| |||||||     
T  26056244 taacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatcttttgtcgtttactattttggtcctctccgttag 26056145  T
Q  101 attttaac 108  Q
    ||||||||    
T  26056144 attttaac 26056137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 3979410 - 3979312
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    |||||||||||||||||||||||||||||| ||| |||||| ||||| ||||| ||||| || ||||| ||| |||  || |||||||||| |||||||    
T  3979410 taacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttctgccgtttactattttggtcctctccgtta 3979312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 35684299 - 35684202
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    ||||||||||| |||||| ||||||||||| ||| |||||| ||||| ||||| ||||||||| |||| ||  |||||||||||||||||| |||||||    
T  35684299 taacttattttcggattttattttggtcccctaactataaa-tgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctccgtta 35684202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 34531682 - 34531778
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgt 97  Q
    ||||||||||| |||||||||||||||||  ||| |||||||||||| ||||| ||| ||||| |||| ||  |||| ||||||||||||| |||||    
T  34531682 taacttattttcggatttcattttggtcctctaactataaaatgtctcaatttggtctcttatgtcttctgtcgttatctcttttggtcctctccgt 34531778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 44977240 - 44977364
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||||| ||||| ||||||||| ||| |||||| ||||||||  | ||||||||| |||| ||| |||||||| ||||||| | || ||||     
T  44977240 taacttatttttggttttcactttggtcccctaactataaagtgtcttaaactggtcccttatgtcttctgccgttacctcatttggtcatctctgttag 44977339  T
Q  101 attttaaccataaatgtctaaggtg 125  Q
     |||||||   ||||||||||||||    
T  44977340 tttttaacatcaaatgtctaaggtg 44977364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 51424270 - 51424332
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttat 63  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||| ||||| ||| |||||    
T  51424270 taacttatttttggatttcattttggtcccttaattataaagtgtctcaatttggtctcttat 51424332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 29001219 - 29001099
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||||||||||||||||||||||  || | ||||| |||| || || ||||||||| | || ||  ||||| | | |||||||| |||||||     
T  29001219 taacttatttttggatttcattttggtccccaaactttaaaacgtctcaaattggtcccttatgtattctgtcgttacttatcttggtcctttccgttaa 29001120  T
Q  101 attttaaccataaatgtctaa 121  Q
     |||||||||||||| |||||    
T  29001119 tttttaaccataaatatctaa 29001099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 42248401 - 42248345
Alignment:
Q  2 aacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcc 58  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||| ||||| ||||    
T  42248401 aacttatttttggatttcattttggtcccataactataaagtgtctcaatttggtcc 42248345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 13567185 - 13567247
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttat 63  Q
    ||||||||||||||||||||||||  | || |||||||||| ||||| |||||||||||||||    
T  13567185 taacttatttttggatttcattttaattccctaattataaagtgtctcaatttagtcccttat 13567247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 25889589 - 25889491
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    ||||||||||| ||||||||||||| |||| | | |||||  ||||| ||||| ||| ||||| |||| | | |||||||||||||||||| |||||||    
T  25889589 taacttattttcggatttcattttgatccccttactataatgtgtctcaatttggtcacttatgtcttcttccgttacctcttttggtcctctccgtta 25889491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 97 - 143
Target Start/End: Original strand, 42246006 - 42246052
Alignment:
Q  97 ttacattttaaccataaatgtctaaggtgtaacagcattgcaggtgg 143  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||    
T  42246006 ttacattttaaccataaatgtccaaggtgtaacaacattgcaggtgg 42246052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 48973217 - 48973303
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttgg 87  Q
    ||||||||||| |||||||||||| ||||| ||| |||||| ||||| |||||  |||||||| |||| ||  ||||||||||||||    
T  48973217 taacttattttcggatttcattttagtcccctaactataaagtgtctcaatttgatcccttatgtcttctgtcgttacctcttttgg 48973303  T

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Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 44340157 - 44340098
Alignment:
Q  4 cttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttat 63  Q
    |||||||||||||||||||||| |||| |||||||||| ||||| | ||| |||||||||    
T  44340157 cttatttttggatttcattttgatcccctaattataaagtgtctcattttggtcccttat 44340098  T

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Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 1061347 - 1061441
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatcc 95  Q
    |||||||||||  ||||| |||||||||||  || |||||| ||||| ||||| ||||||||| | |||||  ||||||||||||| ||| ||||    
T  1061347 taacttattttcagattttattttggtccccaaactataaagtgtctcaatttggtcccttatgttttttgtcgttacctcttttgatcccatcc 1061441  T

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Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 9415666 - 9415776
Alignment:
Q  24 tggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattttaaccataaatgtctaagg 123  Q
    ||||||| ||| || |||| ||||||| || ||||||||| | || ||| ||||||| |||||||||  | |||||  |||||||||||||| |||||||    
T  9415666 tggtcccttaactaaaaaacgtcttaaattggtcccttatgtattatgccgttacctattttggtccacttcgttagtttttaaccataaatatctaagg 9415765  T
Q  124 tgtaacagcat 134  Q
    || | ||||||    
T  9415766 tgaaccagcat 9415776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 28999859 - 28999921
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttat 63  Q
    ||||||||||||| |||||||||||||||| ||| | |||||||| | || ||||||||||||    
T  28999859 taacttatttttgaatttcattttggtcccttaactttaaaatgtttcaaattagtcccttat 28999921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 48974503 - 48974433
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttg 71  Q
    ||||||||||| ||||||||||||||| || ||| |||||| ||||| || || ||||||||| |||||||    
T  48974503 taacttattttcggatttcattttggttccctaactataaagtgtctcaacttggtcccttatgtcttttg 48974433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 33941336 - 33941393
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcc 58  Q
    ||||||||||||| |||| ||||||||||  |||||||||||||||| ||||| ||||    
T  33941336 taacttatttttgaattttattttggtcctttaattataaaatgtctcaatttggtcc 33941393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 9633794 - 9633846
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||||| ||||||||||||||| ||| |||||| ||||| |||||    
T  9633794 taacttatttttggttttcattttggtcccttaactataaagtgtctcaattt 9633846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26054916 - 26054956
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaa 41  Q
    |||||||||||||||||||||||||||||| ||| ||||||    
T  26054916 taacttatttttggatttcattttggtcccctaactataaa 26054956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 37623269 - 37623357
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtc 89  Q
    ||||||||||||||||||  |||| ||||| |||||| |||| ||||||| || ||||||||| | |||| | |||| || ||||||||    
T  37623269 taacttatttttggattttgttttcgtcccctaattaaaaaacgtcttaaattggtcccttatatattttaccgttatctattttggtc 37623357  T

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Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 49139820 - 49139872
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||||| |||| |||||||||||||| |||||| ||||| |||||    
T  49139820 taacttatttttggttttcgttttggtcccataactataaagtgtctcaattt 49139872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 50678385 - 50678437
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    ||||||||||||| ||||||||||| |||| ||| |||||||||||| |||||    
T  50678385 taacttatttttgaatttcattttgatcccttaactataaaatgtctcaattt 50678437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 14169659 - 14169762
Alignment:
Q  22 tttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattttaaccataaatgtctaa 121  Q
    ||||||||  ||| |||||||||||| ||||| ||||| ||  |||||||  |||  || |||||||| |||| ||||  |||||||| |||||||||||    
T  14169659 tttggtcctttaactataaaatgtctcaatttggtcccataaatcttttgtcgtttactattttggtcttatctgttagtttttaaccttaaatgtctaa 14169758  T
Q  122 ggtg 125  Q
    ||||    
T  14169759 ggtg 14169762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 3978063 - 3978161
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    ||||||||||||| |||||||||||||||  ||| |||||| ||||| |||||  |||| || ||||| ||  |||  || |||||||||| |||||||    
T  3978063 taacttatttttgaatttcattttggtcctttaactataaagtgtctcaatttgatcccataattcttctgtcgtttactattttggtcctctccgtta 3978161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 13641276 - 13641334
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||| ||||| ||||||||| ||| |||||| ||||| ||||| |||||    
T  13641276 taacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtccc 13641334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 13929314 - 13929372
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||| ||||| ||||||||| ||| |||||| ||||| ||||| |||||    
T  13929314 taacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggtccc 13929372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 25785987 - 25786045
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||| ||||| ||||||||| ||| |||||| ||||| ||||| |||||    
T  25785987 taacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtccc 25786045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 30548515 - 30548561
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtct 47  Q
    |||||||||||||||||||||||| ||||| |||||| |||| ||||    
T  30548515 taacttatttttggatttcattttcgtcccctaattaaaaaacgtct 30548561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 31859610 - 31859671
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttat 63  Q
    ||||||||||||||||||||||||| |||| ||| |||||| | ||||||||| ||| |||||    
T  31859610 taacttatttttggatttcattttgatccc-taactataaagtatcttaatttggtctcttat 31859671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33793798 - 33793844
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtct 47  Q
    |||||||||||||| ||||| ||||||||| |||||||||| |||||    
T  33793798 taacttatttttggttttcactttggtcccctaattataaagtgtct 33793844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 47511386 - 47511444
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    ||||||||||||| ||||||||||| |||| ||||| |||| ||||| ||||| |||||    
T  47511386 taacttatttttgaatttcattttgatcccttaattttaaactgtctcaatttggtccc 47511444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2973105 - 2973048
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcc 58  Q
    |||||||||||| | ||||||||| ||||| |||||||||| ||||| ||||| ||||    
T  2973105 taacttattttttgttttcattttagtcccttaattataaagtgtctcaatttggtcc 2973048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 20953307 - 20953364
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcc 58  Q
    |||||||||||||||||||||||| || | |||| |||||| ||||| ||||| ||||    
T  20953307 taacttatttttggatttcattttagttctataactataaagtgtctcaatttggtcc 20953364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29264890 - 29264951
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccctta 62  Q
    |||||||||||||  ||||| |||| |||  ||| |||||||||||||||||| ||||||||    
T  29264890 taacttatttttgattttcaatttgatcctctaactataaaatgtcttaatttggtccctta 29264951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 248
Target Start/End: Original strand, 48934391 - 48934449
Alignment:
Q  194 aaaccgttggatcatgtaggtctattgta----acggtgaataattaacacctaatttt 248  Q
    ||||||||||||||||||||| |||||||    ||||||||| |||||||||| |||||    
T  48934391 aaaccgttggatcatgtaggtttattgtagcctacggtgaatgattaacacctgatttt 48934449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14390277 - 14390329
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    ||||||||||||  |||||||||||||||  ||| |||||||||||| |||||    
T  14390277 taacttattttttaatttcattttggtcctctaactataaaatgtctcaattt 14390329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 25787261 - 25787209
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||||| ||||| ||||||||| ||| |||||| ||||| |||||    
T  25787261 taacttatttttggttttcaatttggtcccctaactataaagtgtctcaattt 25787209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 38458105 - 38458157
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||||||||||| ||||||||| ||| | |||| ||||| |||||    
T  38458105 taacttatttttggatttcaatttggtcccctaactttaaattgtctcaattt 38458157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 40135434 - 40135382
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||| ||||||||||||||||  ||| | |||||||||| |||||    
T  40135434 taacttatttttagatttcattttggtcctctaactttaaaatgtctcaattt 40135382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 47512181 - 47512129
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    ||||||||||||| |||||||||||||||| ||| | |||| ||||| |||||    
T  47512181 taacttatttttgaatttcattttggtcccttaactttaaactgtctcaattt 47512129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 3e-30; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 3254875 - 3254982
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| ||||||||||||||| || |||||||| | ||||| ||||| ||||||||| |||||||  |||||||||||||||||||||||||||    
T  3254875 taacttattttcggatttcattttggttccctaattatagagtgtctcaatttggtcccttatgtcttttgtcgttacctcttttggtcctatccgttac 3254974  T
Q  101 attttaac 108  Q
    ||||||||    
T  3254975 attttaac 3254982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 3666365 - 3666258
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||||||||||||||||||| |||||| ||||| ||||| ||||||||| |||||  | |||||||||||||||| ||||||||||    
T  3666365 taacttattttcggatttcattttggtcccataactataaagtgtctcaatttggtcccttatgtctttaaccgttacctcttttggtcatatccgttac 3666266  T
Q  101 attttaac 108  Q
    ||||||||    
T  3666265 attttaac 3666258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 4630181 - 4630074
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||  ||||||||||||||||| ||| |||||| ||||| ||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||    
T  4630181 taacttattttcagatttcattttggtcccctaactataaagtgtctcaatttggtctcttatgtcttttgttgttacctcttttggtcctatccgttac 4630082  T
Q  101 attttaac 108  Q
    ||||||||    
T  4630081 attttaac 4630074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 33837852 - 33837745
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||  ||||| ||||||||||| ||| |||||| ||||| |||||| |||||||| |||||||  |||||||||||||||||||||||||||    
T  33837852 taacttattttcagattttattttggtcccctaactataaagtgtctcaatttaatcccttatgtcttttgtcgttacctcttttggtcctatccgttac 33837753  T
Q  101 attttaac 108  Q
    ||||||||    
T  33837752 attttaac 33837745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 41313364 - 41313257
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| | |||| ||||||||||| ||| |||||| ||||| |||||  |||||||| |||||||| |||||||||||||||| ||||||||||    
T  41313364 taacttattttcgaattttattttggtcccctaactataaagtgtctgaatttgatcccttatgtcttttgccgttacctcttttggtcttatccgttac 41313265  T
Q  101 attttaac 108  Q
    ||||||||    
T  41313264 attttaac 41313257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 2305559 - 2305657
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    ||||||||||||||||||||||||| |||| ||| |||||| ||||| ||||| ||||||||| |||| ||| |||||||||||||||||| |||||||    
T  2305559 taacttatttttggatttcattttgatcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcctctccgtta 2305657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 3255975 - 3255871
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||| | ||||| ||| ||||| |||||||| |||| ||| |||||||||| |||||||    
T  3255975 taacttattttcggatttcattttggtcccctaactataaagtgtttcaatttggtctcttatgtcttttgccgttatctcatttggtcctacccgttac 3255876  T
Q  101 atttt 105  Q
    |||||    
T  3255875 atttt 3255871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 4628901 - 4629008
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||||||||| ||||||||||  ||  |||||| | ||| |||||  |||| ||| |||||||| |||||||||||||||| ||||||||||    
T  4628901 taacttatttttggattttattttggtcctctatatataaagtatctcaatttgatcccatatgtcttttgccgttacctcttttggtcatatccgttac 4629000  T
Q  101 attttaac 108  Q
    ||||||||    
T  4629001 attttaac 4629008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 2306750 - 2306660
Alignment:
Q  9 ttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    |||||||||||||||||||||| ||| | |||| ||||| ||||| |||| |||| |||| ||| |||||||||||||||||| |||||||    
T  2306750 ttttggatttcattttggtcccctaactgtaaagtgtctcaatttggtccattatgtcttctgccgttacctcttttggtcctctccgtta 2306660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 3665243 - 3665328
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttg 86  Q
    ||||||||||| |||||||||||||||||  ||| |||||||||| | ||||| ||||||||| |||| ||| |||||||||||||    
T  3665243 taacttattttcggatttcattttggtcctctaactataaaatgtttcaatttggtcccttatgtcttctgccgttacctcttttg 3665328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 5564078 - 5564140
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttat 63  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||| ||||| |||||||||    
T  5564078 taacttatttttgaatttcattttggtcccttaattataaagtgtctcaatttggtcccttat 5564140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 33836788 - 33836886
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||| ||||| |||  |||| |||| |   |||||||||||||||||| |||||||    
T  33836788 taacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcatttatgtcttctatcgttacctcttttggtcctctccgtta 33836886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 41312519 - 41312617
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    ||||||||||| ||||||||||||| |||  ||| |||||| | ||| ||||| ||| ||||| |||| ||| |||||||||||||||||| |||||||    
T  41312519 taacttattttcggatttcattttgttcctctaactataaagtatctcaatttggtctcttatgtcttatgccgttacctcttttggtcctctccgtta 41312617  T

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Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 5565242 - 5565178
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttattt 65  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||| ||||| |||||| ||||    
T  5565242 taacttatttttgaatttcattttggtcccttaattataaagtgtctcaatttggtccctcattt 5565178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 7490271 - 7490168
Alignment:
Q  22 tttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattttaaccataaatgtctaa 121  Q
    ||||||||  |||||||||||||||| ||||| ||||| ||  ||||||  ||||  || |||||||| |||||||||  |||||||| |||||||||||    
T  7490271 tttggtcctttaattataaaatgtctcaatttggtcccataaatcttttattgtttactattttggtcttatccgttagtttttaaccttaaatgtctaa 7490172  T
Q  122 ggtg 125  Q
    ||||    
T  7490171 ggtg 7490168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 7038429 - 7038371
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||||||||||||||||||| ||| |||||| ||||| ||||| |||||    
T  7038429 taacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtccc 7038371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 10477361 - 10477423
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttat 63  Q
    |||||||||||||||||||||||||||| | |||||||||| ||||| ||||| ||| |||||    
T  10477361 taacttatttttggatttcattttggtctcttaattataaagtgtctcaatttggtctcttat 10477423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 15268400 - 15268462
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttat 63  Q
    |||||||||||||||||| |||||| |||| ||| |||||||||||| ||||| |||||||||    
T  15268400 taacttatttttggatttgattttgatcccttaactataaaatgtctcaatttggtcccttat 15268462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 6209161 - 6209093
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttt 69  Q
    ||||||||||||||||||||||||||||   ||| |||||| ||||||||||| ||||| || ||||||    
T  6209161 taacttatttttggatttcattttggtcatctaactataaagtgtcttaatttggtcccataattcttt 6209093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 6706945 - 6706997
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||||||||||||||||||||| ||| |||||| ||||| |||||    
T  6706945 taacttatttttggatttcattttggtcccctaactataaagtgtctcaattt 6706997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 12852905 - 12852963
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    ||||||| |||||||||||||||||||||| ||| |||||| ||||| ||||| |||||    
T  12852905 taacttacttttggatttcattttggtcccctaactataaagtgtctcaatttggtccc 12852963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 12854201 - 12854143
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||| ||||||||||||||||| ||| |||||| ||||| ||||| |||||    
T  12854201 taacttatttttagatttcattttggtcccttaactataaagtgtctcaatttggtccc 12854143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 15269189 - 15269127
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttat 63  Q
    ||||||||||||| ||| ||||||||||| |||| ||||||| |||| ||||| |||||||||    
T  15269189 taacttatttttgaattacattttggtccaataactataaaacgtctcaatttggtcccttat 15269127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 41295124 - 41295186
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttat 63  Q
    |||||||||||||||||||||||| ||||| |||||| |||| |||| || || |||||||||    
T  41295124 taacttatttttggatttcattttcgtcccctaattaaaaaacgtctcaaattggtcccttat 41295186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 42368405 - 42368359
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtct 47  Q
    |||||||||||||||||||||||||||||| ||| |||||| |||||    
T  42368405 taacttatttttggatttcattttggtcccctaactataaagtgtct 42368359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21545166 - 21545105
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccctta 62  Q
    |||||||||||||||||||||||||||||| ||| | |||| ||||| || || ||||||||    
T  21545166 taacttatttttggatttcattttggtcccttaactttaaattgtctcaaattggtccctta 21545105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 27264670 - 27264612
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    ||||||||||||| |||||||||||||||| ||| | |||| ||||| ||||| |||||    
T  27264670 taacttatttttgaatttcattttggtcccttaactttaaattgtctcaatttggtccc 27264612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 43015558 - 43015616
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    ||||||||||||| |||||||||||||||| ||| | |||| ||||| ||||| |||||    
T  43015558 taacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtccc 43015616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 14573905 - 14573860
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtc 46  Q
    |||| ||||||||||||||||||||||||| ||| |||||| ||||    
T  14573905 taacatatttttggatttcattttggtcccctaactataaagtgtc 14573860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 15850721 - 15850632
Alignment:
Q  36 tataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttacattttaaccataaatgtctaaggtg 125  Q
    |||||||||| | ||||| ||| | ||  |||| ||||||||||| |||||||||  | |||||  |||||||| |||||||||||||||    
T  15850721 tataaaatgtttcaatttggtctcataactcttctgctgttacctattttggtccacttcgttagtttttaaccctaaatgtctaaggtg 15850632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 20948421 - 20948482
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccctta 62  Q
    ||||||||||||| |||||| ||||||||| ||| | |||| ||||| ||||| ||||||||    
T  20948421 taacttatttttgaatttcaatttggtcccttaactttaaattgtctcaatttggtccctta 20948482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 21541080 - 21541141
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccctta 62  Q
    ||||| |||||||||||||||||||||||| ||| | |||| ||||| || || ||||||||    
T  21541080 taactaatttttggatttcattttggtcccttaactttaaattgtctcaaattggtccctta 21541141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 30202980 - 30202919
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccctta 62  Q
    |||||||||||||||||||| ||||||||| ||| | |||| ||||| |||||  |||||||    
T  30202980 taacttatttttggatttcaatttggtcccctaactttaaactgtctcaatttgatccctta 30202919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 37869137 - 37869013
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttg-ctgttacctcttttggtcctatccgtta 99  Q
    |||||||||||||  ||||| ||||||||| ||| |||||| ||||| ||||||||| | ||  |||| || |  |||||| |||||||| | ||||||     
T  37869137 taacttatttttgattttcaatttggtcccttaactataaagtgtctcaatttagtctcataagtcttctgtcgtttacct-ttttggtcttctccgttt 37869039  T
Q  100 cattttaaccataaatgtctaaggtg 125  Q
      |||||||| |||||||||||||||    
T  37869038 gtttttaaccttaaatgtctaaggtg 37869013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 7036985 - 7037109
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||||||||||| ||| ||||| ||| |||||| ||| | ||||| ||||| ||  |||| ||| |||  |  |||||||| | ||||||      
T  7036985 taacttatttttggatttcactttagtcccttaactataaagtgtttcaatttggtcccataagtcttctgccgtttaccattttggtcatttccgttta 7037084  T
Q  101 attttaaccataaatgtctaaggtg 125  Q
     |||||||| ||||| |||||||||    
T  7037085 tttttaaccttaaatatctaaggtg 7037109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11575552 - 11575508
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgt 45  Q
    |||||||||||||| ||| ||||||||||| ||| ||||||||||    
T  11575552 taacttatttttggttttaattttggtcccctaactataaaatgt 11575508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 64; Significance: 8e-28; HSPs: 3)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 27013 - 26906
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||||||||||||||| ||| |||||| ||||| |||||  ||||| || |||||||| ||||||||||||||||| |||||||||    
T  27013 taacttattttcggatttcattttggtcccctaactataaagtgtctcaatttgatccctaatgtcttttgccgttacctcttttggtcccatccgttac 26914  T
Q  101 attttaac 108  Q
    ||||||||    
T  26913 attttaac 26906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 25941 - 26047
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| | |||||||||||||||| ||| |||||| ||||| ||||| ||||||||| |||||||  ||||  ||||||||||| ||||||| |    
T  25941 taacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgtcgttatatcttttggtcccatccgttgc 26040  T
Q  101 attttaa 107  Q
    |||||||    
T  26041 attttaa 26047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 26882 - 26824
Alignment:
Q  194 aaaccgttggatcatgtaggtctattgta----acggtgaataattaacacctaatttt 248  Q
    ||||||||||||||||||||| |||||||    ||||||||| |||||||||| |||||    
T  26882 aaaccgttggatcatgtaggtttattgtagcctacggtgaatgattaacacctgatttt 26824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 5188 - 5295
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||||||||||  |||||||||| ||| |||||| ||||| ||||| |||  | || |||||||| |||||||||||||||||||||||||||    
T  5188 taacttatttttggattttcttttggtcccctaactataaagtgtctcaatttggtctataatgtcttttgccgttacctcttttggtcctatccgttac 5287  T
Q  101 attttaac 108  Q
    ||||||||    
T  5288 attttaac 5295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 248
Target Start/End: Original strand, 5319 - 5377
Alignment:
Q  194 aaaccgttggatcatgtaggtctattgta----acggtgaataattaacacctaatttt 248  Q
    ||||||||||||||||||||| |||||||    ||||||||| |||||||||| |||||    
T  5319 aaaccgttggatcatgtaggtgtattgtagcctacggtgaatgattaacacctgatttt 5377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 1774 - 1872
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    ||||||||||| |||||||||||||||||| |||||||||| ||||| ||||| ||||||||| |||| ||  |||||||||||||||||| |||||||    
T  1774 taacttattttcggatttcattttggtcccctaattataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctccgtta 1872  T

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Target: scaffold0002 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 458553 - 458459
Alignment:
Q  5 ttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    ||||||| |||||| ||||||||||| |||||||||| ||||||||||| ||||||||| |||| |||||||| ||||||||||||| |||||||    
T  458553 ttattttcggattttattttggtcccctaattataaagtgtcttaatttggtcccttatgtcttctgctgttatctcttttggtcctctccgtta 458459  T

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Target: scaffold0084 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 13301 - 13177
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    |||||||||||||| ||||| ||||||||| ||| |||||||||||| ||||| ||||| ||  |||| | | |||||||||||||||||||||| |||     
T  13301 taacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttcgtcccataactcttcttccgttacctcttttggtcctatccattag 13202  T
Q  101 attttaaccataaatgtctaaggtg 125  Q
     |||||||   ||||||||||||||    
T  13201 gttttaacatcaaatgtctaaggtg 13177  T

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Target: scaffold0084; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 11725 - 11823
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    ||||||||||||   ||||| ||| ||||| |||||||||| ||| | ||||| ||||||||| |||| | | ||||||| |||||||||| |||||||    
T  11725 taacttattttttattttcagtttagtcccctaattataaagtgtttcaatttggtcccttatgtcttctccagttacctattttggtcctctccgtta 11823  T

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Target: scaffold1827 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold1827
Description:

Target: scaffold1827; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 1155 - 1049
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||| |||||| |||| |||||  ||| |||||| ||||| ||||| ||||||||| ||||||  |||||||||||||| |||||||||||||    
T  1155 taacttattttcggattttattt-ggtcctctaactataaagtgtctcaatttggtcccttatgtcttttattgttacctcttttgctcctatccgttac 1057  T
Q  101 attttaac 108  Q
    ||||||||    
T  1056 attttaac 1049  T

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Target: scaffold1827; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 1025 - 968
Alignment:
Q  195 aaccgttggatcatgtaggtctattgta----acggtgaataattaacacctaatttt 248  Q
    |||||||||||||||||||| ||||| |    ||||||||| ||||||||||||||||    
T  1025 aaccgttggatcatgtaggtttattgcagcctacggtgaatgattaacacctaatttt 968  T

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Target: scaffold0178 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 2362 - 2264
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    |||||||||||||| ||||||||||||||| |||||||||| ||| | ||||| ||||| ||  |||| | |||||  || |||||||||| |||||||    
T  2362 taacttatttttggttttcattttggtcccctaattataaagtgtttcaatttggtcccataactcttctactgtttactattttggtcctttccgtta 2264  T

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Target: scaffold0178; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1231 - 1270
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaa 41  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  1231 taacttatttttgg-tttcattttggtcccctaattataaa 1270  T

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Target: scaffold0003 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 47089 - 47213
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgttac 100  Q
    ||||||||||||| ||||||||||| |||| ||| | |||| ||||| ||||| ||||| ||  |||| | | |||  || |||||||||| |||||||     
T  47089 taacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgtttactattttggtcctctccgttaa 47188  T
Q  101 attttaaccataaatgtctaaggtg 125  Q
     |||||||  |||||||||||||||    
T  47189 tttttaactttaaatgtctaaggtg 47213  T

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Target: scaffold0003; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 48553 - 48501
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||||||||||||||||||||  ||| |||||| ||||| |||||    
T  48553 taacttatttttggatttcattttggtcctttaactataaagtgtctcaattt 48501  T

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Target: scaffold0051 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 39998 - 39940
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||||||||| ||||||||| ||| |||||| ||||| ||||| |||||    
T  39998 taacttatttttggatttcactttggtcccctaagtataaagtgtctcaatttggtccc 39940  T

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Target: scaffold0046 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 23425 - 23483
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||||| ||||| ||||||||| ||| |||||||||||| ||||| |||||    
T  23425 taacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtccc 23483  T

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Target: scaffold0024 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 73083 - 72985
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcccttatttcttttgctgttacctcttttggtcctatccgtta 99  Q
    |||||||||||||| ||||| ||||||||| |||  ||||| ||||  || || ||| ||||| |||| ||  |||||||||||||||||| |||||||    
T  73083 taacttatttttggttttcactttggtcccctaacaataaagtgtcacaaattggtctcttatgtcttctgtcgttacctcttttggtcctctccgtta 72985  T

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Target: scaffold0630 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3149 - 3088
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccctta 62  Q
    ||||||||||||| |||||||||||||||| ||| | |||| ||||| ||||| ||||||||    
T  3149 taacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtccctta 3088  T

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Target: scaffold0630; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 2031 - 2090
Alignment:
Q  3 acttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccctta 62  Q
    |||||||||| ||||||||||||||||| ||| | |||| ||||| ||||| ||||||||    
T  2031 acttatttttagatttcattttggtcccttaactttaaattgtctcaatttggtccctta 2090  T

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Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 56797 - 56740
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtcc 58  Q
    |||||||||||| ||||||| ||||||||| |||||||||| ||||| ||||| ||||    
T  56797 taacttattttttgatttcactttggtcccctaattataaagtgtctcaatttggtcc 56740  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 28152 - 28209
Alignment:
Q  2 aacttatttttggatttcattttggtcccataattataaaatgtcttaatttagtccc 59  Q
    |||||||||||| |||||||||||||||| ||| | ||||| |||| ||||| |||||    
T  28152 aacttatttttgaatttcattttggtcccttaactttaaaacgtctcaatttggtccc 28209  T

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Target: scaffold0687 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 6657 - 6609
Alignment:
Q  5 ttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||  ||||||||||||||  |||||||||||||||| |||||    
T  6657 ttatttttgattttcattttggtcctctaattataaaatgtctcaattt 6609  T

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Target: scaffold0369 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12929 - 12981
Alignment:
Q  1 taacttatttttggatttcattttggtcccataattataaaatgtcttaattt 53  Q
    |||||||||||||  ||| | |||||||||||||||||||| ||||| |||||    
T  12929 taacttatttttgatttttactttggtcccataattataaagtgtctcaattt 12981  T

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