View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13273_low_32 (Length: 256)
Name: NF13273_low_32
Description: NF13273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13273_low_32 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 2 - 256
Target Start/End: Complemental strand, 286629 - 286375
Alignment:
| Q |
2 |
ctggtgaaagagagacaagaagaaatgtaatcacttccgggaaagcaaagcaagtaggacataagctgtttttgttagtttacctgttgaaaagacaaaa |
101 |
Q |
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| T |
286629 |
ctggtgaaagagagacaagaagaaatgtaatcactgcagggcaagcaaagcaagtaggaaataagatgtttttgaaagtttacctgttgaaaagacaaaa |
286530 |
T |
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| Q |
102 |
catcagacctgaacctggtgcgttcacctttatcacatttgattaatttggaaacatttggtaatgaaactccaccaggtaaaaccacctctcttacatc |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
286529 |
catcagacctgaacctggtgcgttcacctttatcacatttgattaatttggaaacatttggtaatgaaactccaccaggtaaaaccacctctcttaaatc |
286430 |
T |
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| Q |
202 |
attatcttcatctatctcaatcaagcgtgaatgaatagaatcacctttacaaaac |
256 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
286429 |
attatcttcatctatctcaatcaagcgtgaatgaatagaatcacctttacaaaac |
286375 |
T |
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