View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13273_low_37 (Length: 241)
Name: NF13273_low_37
Description: NF13273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13273_low_37 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 2 - 241
Target Start/End: Complemental strand, 26474707 - 26474468
Alignment:
| Q |
2 |
acaaatttcatagtagttaacaagtggaatagtagcacaaatcatagttgtatgttaggagtttagactcgttttttgtattgagtttttgtcatttgat |
101 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
26474707 |
acaaatttcatagtagttaacaagtggaatagtagcgcaaatcatagttgtatgttaggagtttagactagttttttgtattgagtttttgtcatttgat |
26474608 |
T |
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| Q |
102 |
taaatctttacataaatttgttcaaatttccatagtcctctcataattactatgcatgtctattttgtgtaaaaaattgattttagaaactaattatctc |
201 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26474607 |
taaatctttacataaatttgttcaaatttccatagtcctttcataattactatgcatgtctattttgtgtaaaaaattgattttagaaactaattatctc |
26474508 |
T |
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| Q |
202 |
acaagttgagtagaatcacaagaaatgtcaaaacatttcc |
241 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
26474507 |
acaagttgagtagaatcacaagaaatgtcaaaacatttcc |
26474468 |
T |
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