View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13277_high_3 (Length: 422)

Name: NF13277_high_3
Description: NF13277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13277_high_3
NF13277_high_3
[»] chr5 (35 HSPs)
chr5 (19-242)||(32838807-32839040)
chr5 (272-422)||(22936115-22936265)
chr5 (274-416)||(6091435-6091577)
chr5 (276-422)||(18411931-18412077)
chr5 (276-422)||(29543218-29543364)
chr5 (271-422)||(8406611-8406762)
chr5 (276-422)||(4765763-4765909)
chr5 (276-422)||(12970733-12970879)
chr5 (279-416)||(27481082-27481219)
chr5 (278-422)||(555909-556053)
chr5 (279-422)||(11855858-11856001)
chr5 (276-422)||(14207024-14207170)
chr5 (273-422)||(28602275-28602424)
chr5 (278-422)||(36703506-36703650)
chr5 (280-422)||(19065708-19065850)
chr5 (275-416)||(32535658-32535799)
chr5 (280-422)||(8646594-8646735)
chr5 (276-422)||(26637223-26637370)
chr5 (279-422)||(1664456-1664599)
chr5 (274-407)||(6930362-6930495)
chr5 (278-416)||(27480735-27480873)
chr5 (334-422)||(36703654-36703742)
chr5 (272-422)||(17251532-17251681)
chr5 (276-417)||(28429450-28429592)
chr5 (276-422)||(43347097-43347243)
chr5 (280-350)||(20962286-20962356)
chr5 (280-398)||(36978358-36978478)
chr5 (282-353)||(16720958-16721029)
chr5 (274-419)||(35602982-35603124)
chr5 (292-418)||(35348730-35348858)
chr5 (336-416)||(20962373-20962453)
chr5 (280-422)||(31583263-31583404)
chr5 (279-376)||(42012433-42012530)
chr5 (270-416)||(30899317-30899463)
chr5 (278-342)||(40276524-40276587)
[»] chr7 (47 HSPs)
chr7 (269-422)||(44565760-44565913)
chr7 (274-422)||(45265251-45265399)
chr7 (272-422)||(33378552-33378702)
chr7 (277-422)||(35488392-35488537)
chr7 (273-422)||(43948964-43949113)
chr7 (274-422)||(11329713-11329861)
chr7 (274-422)||(25924840-25924988)
chr7 (274-422)||(28904389-28904537)
chr7 (278-422)||(34930670-34930814)
chr7 (277-414)||(27214066-27214203)
chr7 (277-422)||(48160776-48160921)
chr7 (280-422)||(45045352-45045494)
chr7 (277-422)||(45448665-45448810)
chr7 (274-422)||(27248013-27248161)
chr7 (274-422)||(48313842-48313990)
chr7 (276-422)||(48341086-48341231)
chr7 (276-422)||(38396569-38396714)
chr7 (274-422)||(41632567-41632710)
chr7 (273-422)||(9947193-9947343)
chr7 (282-422)||(39553910-39554051)
chr7 (280-416)||(30686200-30686336)
chr7 (278-416)||(27419433-27419571)
chr7 (280-422)||(37534305-37534447)
chr7 (281-422)||(38543920-38544062)
chr7 (281-416)||(44819981-44820116)
chr7 (314-422)||(8419792-8419900)
chr7 (282-422)||(25097796-25097937)
chr7 (304-416)||(9814423-9814535)
chr7 (273-416)||(31921933-31922078)
chr7 (282-403)||(18823890-18824011)
chr7 (322-422)||(40212657-40212757)
chr7 (270-422)||(40385830-40385982)
chr7 (272-422)||(17276361-17276512)
chr7 (277-422)||(6656673-6656819)
chr7 (280-416)||(31598449-31598585)
chr7 (276-422)||(5543334-5543479)
chr7 (274-422)||(45722879-45723018)
chr7 (277-398)||(43446109-43446229)
chr7 (273-328)||(16916182-16916237)
chr7 (283-422)||(22156382-22156520)
chr7 (283-422)||(22212297-22212435)
chr7 (326-418)||(10902879-10902971)
chr7 (276-319)||(40212626-40212669)
chr7 (386-422)||(16825557-16825593)
chr7 (368-416)||(41684230-41684278)
chr7 (279-422)||(45440637-45440776)
chr7 (316-398)||(38528931-38529012)
[»] chr6 (19 HSPs)
chr6 (274-416)||(18897641-18897783)
chr6 (270-422)||(10246319-10246471)
chr6 (276-422)||(2657422-2657568)
chr6 (279-422)||(14170740-14170883)
chr6 (276-422)||(1316741-1316887)
chr6 (276-422)||(7053781-7053927)
chr6 (276-422)||(8029025-8029171)
chr6 (278-422)||(16968649-16968793)
chr6 (292-396)||(7344723-7344827)
chr6 (273-414)||(6705963-6706104)
chr6 (282-396)||(21008208-21008322)
chr6 (279-413)||(14781822-14781955)
chr6 (273-416)||(9762248-9762392)
chr6 (278-338)||(11570071-11570131)
chr6 (273-422)||(8314613-8314762)
chr6 (274-407)||(12328063-12328194)
chr6 (327-416)||(346039-346130)
chr6 (276-355)||(3869218-3869297)
chr6 (388-422)||(7344286-7344320)
[»] chr1 (59 HSPs)
chr1 (272-422)||(8331733-8331883)
chr1 (276-422)||(5806479-5806625)
chr1 (274-422)||(12190380-12190528)
chr1 (272-422)||(9115556-9115706)
chr1 (276-422)||(47031582-47031728)
chr1 (277-422)||(25789487-25789632)
chr1 (274-422)||(14788444-14788592)
chr1 (279-422)||(9832073-9832216)
chr1 (276-422)||(6911208-6911354)
chr1 (276-422)||(36361506-36361652)
chr1 (276-422)||(46666431-46666577)
chr1 (274-416)||(52630494-52630636)
chr1 (277-422)||(20260289-20260434)
chr1 (277-422)||(39930181-39930326)
chr1 (276-422)||(32824644-32824790)
chr1 (278-422)||(32202516-32202660)
chr1 (276-422)||(50190967-50191113)
chr1 (280-422)||(51445282-51445424)
chr1 (278-422)||(1597545-1597689)
chr1 (275-405)||(25473977-25474107)
chr1 (279-422)||(2430223-2430365)
chr1 (280-422)||(4683576-4683718)
chr1 (277-422)||(38964882-38965027)
chr1 (278-422)||(37436822-37436966)
chr1 (276-422)||(5518706-5518852)
chr1 (283-422)||(13653581-13653721)
chr1 (276-416)||(29091395-29091535)
chr1 (279-422)||(48916224-48916368)
chr1 (276-422)||(2632576-2632722)
chr1 (318-422)||(49823099-49823203)
chr1 (279-422)||(35187181-35187325)
chr1 (291-416)||(52699674-52699799)
chr1 (274-416)||(46960349-46960492)
chr1 (278-422)||(39329347-39329477)
chr1 (279-422)||(1228080-1228225)
chr1 (333-422)||(6978550-6978639)
chr1 (277-422)||(47677368-47677513)
chr1 (349-422)||(3572768-3572841)
chr1 (276-416)||(24116543-24116683)
chr1 (279-422)||(48462258-48462400)
chr1 (275-416)||(17475517-17475659)
chr1 (273-422)||(49627294-49627444)
chr1 (279-384)||(13932111-13932218)
chr1 (274-422)||(37261540-37261688)
chr1 (280-422)||(38519263-38519405)
chr1 (292-417)||(45813602-45813727)
chr1 (279-415)||(31806957-31807093)
chr1 (348-422)||(1007566-1007640)
chr1 (277-397)||(3939225-3939345)
chr1 (276-372)||(45771815-45771911)
chr1 (278-394)||(19923694-19923810)
chr1 (273-353)||(52186269-52186349)
chr1 (322-422)||(30240782-30240880)
chr1 (281-326)||(49824022-49824067)
chr1 (276-342)||(9011445-9011511)
chr1 (276-330)||(37726805-37726859)
chr1 (316-407)||(29769272-29769366)
chr1 (282-358)||(13521053-13521129)
chr1 (277-311)||(1007539-1007573)
[»] chr8 (40 HSPs)
chr8 (277-422)||(38363804-38363949)
chr8 (274-422)||(37392749-37392897)
chr8 (274-422)||(35818627-35818775)
chr8 (278-422)||(18297836-18297980)
chr8 (274-422)||(38132941-38133089)
chr8 (279-422)||(42755592-42755735)
chr8 (273-422)||(12710364-12710513)
chr8 (274-422)||(16313710-16313858)
chr8 (274-422)||(25837631-25837779)
chr8 (276-422)||(7930961-7931107)
chr8 (276-422)||(32661137-32661283)
chr8 (281-422)||(10896419-10896560)
chr8 (274-422)||(26061864-26062012)
chr8 (276-422)||(3049731-3049877)
chr8 (276-422)||(26602140-26602286)
chr8 (272-422)||(40197256-40197406)
chr8 (278-422)||(18726823-18726967)
chr8 (288-422)||(1554557-1554692)
chr8 (279-422)||(5020695-5020837)
chr8 (278-422)||(19160943-19161088)
chr8 (277-416)||(31117732-31117874)
chr8 (279-422)||(21137334-21137476)
chr8 (276-422)||(15226688-15226834)
chr8 (276-415)||(16219151-16219290)
chr8 (278-416)||(33444831-33444969)
chr8 (319-422)||(35394156-35394259)
chr8 (276-420)||(25899381-25899523)
chr8 (274-422)||(43872168-43872316)
chr8 (315-416)||(6805831-6805936)
chr8 (273-416)||(33533601-33533744)
chr8 (348-422)||(41228916-41228990)
chr8 (279-416)||(41432464-41432603)
chr8 (333-422)||(7317156-7317244)
chr8 (277-422)||(29421691-29421839)
chr8 (276-398)||(34672083-34672207)
chr8 (278-422)||(37981988-37982134)
chr8 (274-335)||(35394078-35394139)
chr8 (278-357)||(12649859-12649938)
chr8 (278-353)||(37124073-37124148)
chr8 (277-318)||(41228976-41229017)
[»] chr4 (55 HSPs)
chr4 (274-422)||(41859249-41859397)
chr4 (276-422)||(13230192-13230338)
chr4 (278-422)||(27763102-27763246)
chr4 (274-422)||(45595992-45596140)
chr4 (273-422)||(47670085-47670234)
chr4 (273-422)||(55968203-55968352)
chr4 (274-422)||(43722988-43723136)
chr4 (276-416)||(45748004-45748144)
chr4 (276-422)||(39730496-39730642)
chr4 (276-422)||(48873747-48873893)
chr4 (276-422)||(48879051-48879197)
chr4 (273-422)||(42773671-42773820)
chr4 (274-422)||(25932165-25932313)
chr4 (274-422)||(27555151-27555298)
chr4 (276-418)||(23686513-23686655)
chr4 (276-422)||(35999412-35999558)
chr4 (283-416)||(48519100-48519233)
chr4 (274-422)||(18405436-18405584)
chr4 (278-422)||(41744424-41744568)
chr4 (278-416)||(40435628-40435766)
chr4 (284-413)||(50673116-50673245)
chr4 (272-422)||(935848-935998)
chr4 (276-422)||(8321971-8322117)
chr4 (276-422)||(39835510-39835656)
chr4 (277-422)||(31938072-31938217)
chr4 (278-422)||(27942465-27942609)
chr4 (276-422)||(6280124-6280270)
chr4 (284-422)||(34238157-34238295)
chr4 (279-422)||(18931482-18931625)
chr4 (276-422)||(32953249-32953395)
chr4 (318-422)||(34049800-34049904)
chr4 (315-422)||(39498590-39498697)
chr4 (315-422)||(39501929-39502036)
chr4 (277-415)||(7258691-7258829)
chr4 (277-422)||(36858135-36858279)
chr4 (276-422)||(51968505-51968651)
chr4 (277-416)||(30790275-30790413)
chr4 (280-412)||(52469427-52469561)
chr4 (276-389)||(38413902-38414015)
chr4 (279-422)||(10400984-10401126)
chr4 (277-353)||(36860028-36860104)
chr4 (277-416)||(38394634-38394773)
chr4 (272-372)||(18405125-18405224)
chr4 (282-384)||(52413959-52414061)
chr4 (284-397)||(37014611-37014724)
chr4 (363-422)||(25916236-25916295)
chr4 (319-412)||(24805304-24805397)
chr4 (276-335)||(25916302-25916362)
chr4 (339-407)||(47426452-47426520)
chr4 (282-416)||(14796295-14796429)
chr4 (275-398)||(12276137-12276260)
chr4 (286-398)||(44309497-44309609)
chr4 (314-361)||(37296473-37296520)
chr4 (313-384)||(54478366-54478437)
chr4 (303-416)||(48059808-48059922)
[»] chr2 (50 HSPs)
chr2 (276-422)||(346548-346694)
chr2 (276-422)||(6171513-6171659)
chr2 (276-422)||(14777701-14777847)
chr2 (272-422)||(4559277-4559427)
chr2 (273-422)||(37192241-37192390)
chr2 (278-422)||(17965707-17965851)
chr2 (274-422)||(42674864-42675012)
chr2 (274-416)||(2050586-2050728)
chr2 (276-422)||(11071327-11071473)
chr2 (276-422)||(41729333-41729479)
chr2 (277-422)||(5770313-5770458)
chr2 (278-422)||(638318-638462)
chr2 (274-422)||(21737611-21737759)
chr2 (279-422)||(13760692-13760835)
chr2 (279-422)||(37233155-37233298)
chr2 (281-422)||(9734049-9734190)
chr2 (276-416)||(23943885-23944025)
chr2 (279-422)||(28311899-28312042)
chr2 (280-422)||(26309993-26310135)
chr2 (276-422)||(40951062-40951208)
chr2 (277-416)||(20426691-20426830)
chr2 (271-422)||(37533670-37533820)
chr2 (303-422)||(41750278-41750397)
chr2 (313-422)||(2521434-2521543)
chr2 (279-422)||(3902182-3902325)
chr2 (284-422)||(27358165-27358303)
chr2 (276-416)||(18713865-18714005)
chr2 (278-422)||(39819414-39819558)
chr2 (288-422)||(11763603-11763737)
chr2 (284-422)||(45408981-45409119)
chr2 (303-416)||(34356908-34357020)
chr2 (279-422)||(14832536-14832679)
chr2 (273-416)||(45693908-45694051)
chr2 (280-416)||(3254301-3254437)
chr2 (276-416)||(7007307-7007447)
chr2 (276-422)||(40569740-40569886)
chr2 (329-422)||(39995342-39995435)
chr2 (273-422)||(5003038-5003187)
chr2 (284-422)||(4875506-4875645)
chr2 (280-391)||(1623078-1623188)
chr2 (315-422)||(1988073-1988180)
chr2 (282-422)||(13790018-13790159)
chr2 (284-416)||(41298126-41298255)
chr2 (284-337)||(2521381-2521434)
chr2 (276-398)||(14403431-14403555)
chr2 (284-422)||(13539399-13539537)
chr2 (340-413)||(14253340-14253413)
chr2 (282-354)||(14253254-14253326)
chr2 (276-353)||(25444922-25444999)
chr2 (282-353)||(25724753-25724825)
[»] chr3 (47 HSPs)
chr3 (273-422)||(11239323-11239472)
chr3 (275-422)||(46359673-46359820)
chr3 (280-422)||(47115060-47115202)
chr3 (274-422)||(48339960-48340108)
chr3 (276-422)||(6231704-6231850)
chr3 (276-422)||(8476511-8476657)
chr3 (276-422)||(26848744-26848890)
chr3 (276-422)||(33218116-33218262)
chr3 (274-422)||(40907986-40908133)
chr3 (273-422)||(20297512-20297661)
chr3 (278-422)||(1098923-1099067)
chr3 (278-422)||(20414668-20414812)
chr3 (279-422)||(43719128-43719271)
chr3 (276-422)||(24574289-24574435)
chr3 (280-422)||(31611188-31611330)
chr3 (277-421)||(9320652-9320797)
chr3 (278-422)||(29512324-29512468)
chr3 (276-422)||(44952030-44952176)
chr3 (279-422)||(43132359-43132502)
chr3 (274-422)||(10822920-10823068)
chr3 (282-422)||(28124639-28124779)
chr3 (270-416)||(53165933-53166079)
chr3 (278-416)||(26849354-26849492)
chr3 (273-422)||(6832125-6832274)
chr3 (279-416)||(40584336-40584473)
chr3 (278-422)||(31436125-31436269)
chr3 (279-416)||(24783934-24784072)
chr3 (278-416)||(12228463-12228601)
chr3 (281-422)||(49216027-49216168)
chr3 (283-422)||(38140571-38140710)
chr3 (277-422)||(28770412-28770557)
chr3 (280-372)||(6927817-6927909)
chr3 (277-422)||(27822994-27823143)
chr3 (283-414)||(18460582-18460712)
chr3 (348-422)||(19532939-19533013)
chr3 (278-364)||(32070994-32071080)
chr3 (288-416)||(27093763-27093890)
chr3 (278-397)||(31267575-31267694)
chr3 (363-416)||(32071256-32071309)
chr3 (273-416)||(28693640-28693783)
chr3 (326-410)||(2565666-2565749)
chr3 (282-416)||(33650223-33650357)
chr3 (281-353)||(45826064-45826136)
chr3 (312-422)||(1247102-1247212)
chr3 (281-353)||(55435654-55435726)
chr3 (272-311)||(19532907-19532946)
chr3 (280-333)||(2566471-2566524)
[»] scaffold0006 (3 HSPs)
scaffold0006 (274-422)||(201646-201793)
scaffold0006 (283-422)||(143342-143482)
scaffold0006 (282-422)||(119051-119190)
[»] scaffold0189 (1 HSPs)
scaffold0189 (279-422)||(29155-29298)
[»] scaffold0702 (1 HSPs)
scaffold0702 (274-416)||(3773-3916)
[»] scaffold0662 (1 HSPs)
scaffold0662 (274-416)||(4186-4329)
[»] scaffold0005 (1 HSPs)
scaffold0005 (282-416)||(43302-43436)


Alignment Details
Target: chr5 (Bit Score: 150; Significance: 4e-79; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 19 - 242
Target Start/End: Complemental strand, 32839040 - 32838807
Alignment:
Q  19 ttccccaccaaacaatggattcaacgtatacagaatatatctgtccagagacatattggcccctccaacattgaattcaatttcaatgtagactgcaacc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32839040 ttccccaccaaacaatggattcaacgtatacagaatatatctgtccagagacatattggcccctccaacattgaattcaatttcaatgtagactgcaacc 32838941  T
Q  119 tttccacgttctactacaatattcccacacctgcctctgtcaaatactctatcttca---nnnnnnnnnnnnaaggaaatactctatcttcataaagttc 215  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||||||||||    
T  32838940 tttccacgttctcctacattattcccacacctgcctctgtcaaatactctatcttcatttttattttttttgaaggaaatactctatcttcataaagttc 32838841  T
Q  216 a-------attaagatttttaaatcctatacata 242  Q
    |       ||||||||||||||||||||||||||    
T  32838840 aatatttcattaagatttttaaatcctatacata 32838807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 272 - 422
Target Start/End: Complemental strand, 22936265 - 22936115
Alignment:
Q  272 tctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaa 371  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22936265 tctaagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaa 22936166  T
Q  372 atatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22936165 atatgtttggttagctttataatattcctaggaaccataaaaatagggatt 22936115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 274 - 416
Target Start/End: Original strand, 6091435 - 6091577
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  6091435 taagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaat 6091534  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaata 416  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6091535 atgtttggttagctttataatattcctaggaaccataaaaata 6091577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 276 - 422
Target Start/End: Original strand, 18411931 - 18412077
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  18411931 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatat 18412030  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  18412031 gtttggttagctttataatattcctaggaaccataaaaatagggatt 18412077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 276 - 422
Target Start/End: Complemental strand, 29543364 - 29543218
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  29543364 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttagaaaaaatat 29543265  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  29543264 gtttggttagctttataatattcctaggaaccataaaaatagggatt 29543218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 271 - 422
Target Start/End: Original strand, 8406611 - 8406762
Alignment:
Q  271 atctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaa 370  Q
    |||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8406611 atcttagggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaa 8406710  T
Q  371 aatatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||| |||||    
T  8406711 aatatgtttggttagctttataatattccaaggaaccaaaaaaatagggatt 8406762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 276 - 422
Target Start/End: Complemental strand, 4765909 - 4765763
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  4765909 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattctaaggaatttaggaaaaatat 4765810  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  4765809 gtttggttagctttataatattcctaggaaccataaaaatagggatt 4765763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 276 - 422
Target Start/End: Complemental strand, 12970879 - 12970733
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  12970879 agggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatat 12970780  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||    
T  12970779 gtttggttagctttataatattcataggaaccataaaaatagggatt 12970733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 279 - 416
Target Start/End: Original strand, 27481082 - 27481219
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtt 378  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  27481082 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtt 27481181  T
Q  379 tggttagctttataatattcctaggaaccataaaaata 416  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27481182 tggttagctttataatattcctaggaaccataaaaata 27481219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 278 - 422
Target Start/End: Complemental strand, 556053 - 555909
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  556053 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgt 555954  T
Q  378 ttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||||||||| ||| || |||||    
T  555953 ttggttagctttataatattcctaggaaccatcaaattagggatt 555909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 279 - 422
Target Start/End: Complemental strand, 11856001 - 11855858
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtt 378  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  11856001 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtt 11855902  T
Q  379 tggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||| ||||||||||||||||||||||||||||||| |||||    
T  11855901 tggttaactttataatattcctaggaaccataaaaatagggatt 11855858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 276 - 422
Target Start/End: Complemental strand, 14207170 - 14207024
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14207170 agggtgtgtttgtttcaagtttacaaaatttattcctaggaataacattcattggaatataaagatgagaattttatttcaaggaatttaggaaaaatat 14207071  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||    
T  14207070 gtttggttaactttataatattcctaggaaccataaaaatagggatt 14207024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 273 - 422
Target Start/End: Original strand, 28602275 - 28602424
Alignment:
Q  273 ctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaa 372  Q
    |||||||||||||||||||||||||| || |||||||  |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  28602275 ctaagggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttggaatataaagataggaattttattccaaggaatttaggaaaaa 28602374  T
Q  373 tatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  28602375 tatgtttggttagctttataatattcctaggaaccatacaaatagggatt 28602424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 278 - 422
Target Start/End: Original strand, 36703506 - 36703650
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    |||||||||||||||| |||| || |||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  36703506 ggtgtgtttgtttcaaatttaccaaatttattcataggaataacattccttggaatttaaagatgagaattttatttcaaggaatttaggaaaaatatgt 36703605  T
Q  378 ttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  36703606 ttggttagctttataatattcctaggaaccataaaaatagggatt 36703650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 280 - 422
Target Start/End: Complemental strand, 19065850 - 19065708
Alignment:
Q  280 tgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgttt 379  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||    
T  19065850 tgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttagaaaatatatgttt 19065751  T
Q  380 ggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||| ||| |||||    
T  19065750 ggttagctttataatattcctaggaaccataaatatagggatt 19065708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 275 - 416
Target Start/End: Original strand, 32535658 - 32535799
Alignment:
Q  275 aagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaata 374  Q
    |||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  32535658 aagggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttaatccaaggaatttaggaaaaata 32535757  T
Q  375 tgtttggttagctttataatattcctaggaaccataaaaata 416  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  32535758 tgtttggttagctttataatattctcaggaaccataaaaata 32535799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 280 - 422
Target Start/End: Complemental strand, 8646735 - 8646594
Alignment:
Q  280 tgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgttt 379  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||    
T  8646735 tgtgtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagataggaattttattccaaggaatttaggaaaattatgttt 8646636  T
Q  380 ggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||| |||||||||||||||||||||||| |||||    
T  8646635 ggttagctttat-atattcctaggaaccataaaaatagggatt 8646594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 276 - 422
Target Start/End: Complemental strand, 26637370 - 26637223
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||| |||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| |    
T  26637370 agggtgtgtttatttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgggaattttattccaaggtatttagaaaaaatgt 26637271  T
Q  376 gtttggttagctttataatattcctaggaaccata-aaaatatggatt 422  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  26637270 gtttggttaactttataatattcctaggaaccataaaaaatatggatt 26637223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 279 - 422
Target Start/End: Original strand, 1664456 - 1664599
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtt 378  Q
    |||||||||||||||||||| || ||||||||||  |||||| ||| |||| |||||||||||| |||||||||||||||| |||||| |||||||||||    
T  1664456 gtgtgtttgtttcaagtttaccaaatttattcctgagaataatatttcttgaaatataaagatgagaattttatttcaaggtatttagaaaaaatatgtt 1664555  T
Q  379 tggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||| ||||||||||||| || |||||||||||||| |||||    
T  1664556 tggttaactttataatattcttatgaaccataaaaatagggatt 1664599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 274 - 407
Target Start/End: Original strand, 6930362 - 6930495
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||||||||||||| |||||||||| |||||||| || ||||||||||||||| ||||| |||||| ||||||||||| |||| |||||  ||||||    
T  6930362 taagggtgtgtttgttttaagtttatcaaatttattcatatgaataacattccttgaaatatcaagatgagaattttattttaaggtatttaaaaaaaat 6930461  T
Q  374 atgtttggttagctttataatattcctaggaacc 407  Q
    ||||||||||| ||||||||||||||||| ||||    
T  6930462 atgtttggttaactttataatattcctagaaacc 6930495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 278 - 416
Target Start/End: Original strand, 27480735 - 27480873
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    ||||||||| ||| ||||||| || |||||||  ||||||||| ||| |||| |||||||||||| |||||||||||||||| |||||| |||||||||     
T  27480735 ggtgtgtttattttaagtttaccaaatttatttttaggaataatatttcttgaaatataaagatgagaattttatttcaaggtatttagaaaaaatatgc 27480834  T
Q  378 ttggttagctttataatattcctaggaaccataaaaata 416  Q
    ||||||| |||||||||||| ||| ||||||||||||||    
T  27480835 ttggttaactttataatatttctatgaaccataaaaata 27480873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 334 - 422
Target Start/End: Original strand, 36703654 - 36703742
Alignment:
Q  334 ataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  36703654 ataaagatgagaattttattccaaagaatttaggaaaaatatgtttggttagctttataatattcctaggaaccatcaaaatagggatt 36703742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 272 - 422
Target Start/End: Original strand, 17251532 - 17251681
Alignment:
Q  272 tctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttag-gaaa 370  Q
    |||||||||||||||||||||| |||| || |||||||||||  ||||||||| |||||||||||| ||| |||||||| || ||||| ||||||  |||    
T  17251532 tctaagggtgtgtttgtttcaaatttaccaaatttattccta-caataacatttcttggaatataaggataggaatttttttccaaggtatttagataaa 17251630  T
Q  371 aatatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    || ||||||||||| | || ||||||||||| |||||||||||||| |||||    
T  17251631 aagatgtttggttaacattttaatattccta-gaaccataaaaatagggatt 17251681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 276 - 417
Target Start/End: Original strand, 28429450 - 28429592
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaattt-aggaaaaata 374  Q
    ||||||||||||||||||||||| || ||||||| |||| |||||||||||||| |||||||||||| |||||||||| ||| | |||| |  ||||| |    
T  28429450 agggtgtgtttgtttcaagtttaccaaatttatttctagaaataacattccttgaaatataaagatgtgaattttattccaaagtatttaaaaaaaaaga 28429549  T
Q  375 tgtttggttagctttataatattcctaggaaccataaaaatat 417  Q
    |||||||||| | |||||||||||  || |||| |||||||||    
T  28429550 tgtttggttaacattataatattctcagaaaccttaaaaatat 28429592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 276 - 422
Target Start/End: Complemental strand, 43347243 - 43347097
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||   | |||||||| |||||||||||||  |||||||||||||||| ||| ||||||  |||| |||||| ||||| |     
T  43347243 agggtgtgtttgtttcaagttttcgaaatttattcttaggaataacatttattggaatataaagatgagaagtttattctaaggtatttagaaaaaaaaa 43347144  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||| |  | ||||||||  ||||||| |||||||| |||||    
T  43347143 gtttggttaacaatgtaatattcgaaggaaccttaaaaatagggatt 43347097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 280 - 350
Target Start/End: Original strand, 20962286 - 20962356
Alignment:
Q  280 tgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaatttt 350  Q
    ||||||||||| |||||||||| |||||||| ||||||||||||||||||||| |||||||||| ||||||    
T  20962286 tgtgtttgttttaagtttatcaaatttattcataggaataacattccttggaacataaagatggaaatttt 20962356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 280 - 398
Target Start/End: Complemental strand, 36978478 - 36978358
Alignment:
Q  280 tgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaattt--aggaaaaatatgt 377  Q
    |||||||||||||||||||| | |||||||  |||||||||||||| || ||||||||| ||| ||||||||||| |||| ||||  |  ||||| ||||    
T  36978478 tgtgtttgtttcaagtttattaaatttatttataggaataacattctttagaatataaatatgagaattttattttaaggtatttaaaaaaaaaacatgt 36978379  T
Q  378 ttggttagctttataatattc 398  Q
    || |||||| |||||||||||    
T  36978378 ttagttagcattataatattc 36978358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 282 - 353
Target Start/End: Complemental strand, 16721029 - 16720958
Alignment:
Q  282 tgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatt 353  Q
    |||||||||||||||||  | ||||||||||||||||||||||| |||||||||||| ||| ||||||||||    
T  16721029 tgtttgtttcaagtttactaaatttattcctaggaataacattcattggaatataaaaatgtgaattttatt 16720958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 274 - 419
Target Start/End: Complemental strand, 35603124 - 35602982
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    |||||||||||||| ||||||| || || ||| |||  |||||||||||||  ||||||||||||||| | |||||||||  || | |||||  |||||     
T  35603124 taagggtgtgtttggttcaagtgtaccaaatt-atttttaggaataacattttttggaatataaagatagaaattttattctaaagtattta--aaaaaa 35603028  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatgg 419  Q
    ||||||||||| | || ||||||||| ||||||| |||||||||||    
T  35603027 atgtttggttaacattttaatattccaaggaaccttaaaaatatgg 35602982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 292 - 418
Target Start/End: Complemental strand, 35348858 - 35348730
Alignment:
Q  292 aagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttag--gaaaaatatgtttggttagcttt 389  Q
    |||||||||| |||||||| || ||||||||||| |||||| ||||||||| ||||||||||| |||| ||  ||   ||||| ||||||  ||| | ||    
T  35348858 aagtttatcaaatttattcttaagaataacattcattggaacataaagatgagaattttattttaaggtatacagaaaaaaaaaatgtttttttaacatt 35348759  T
Q  390 ataatattcctaggaaccataaaaatatg 418  Q
    ||||||||||  |||||||||||||||||    
T  35348758 ataatattcccgggaaccataaaaatatg 35348730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 20962373 - 20962453
Alignment:
Q  336 aaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataaaaata 416  Q
    |||||||||||||||||| ||||| |||||  ||||||||||||| ||| | |||||||||| || |||||||||||||||    
T  20962373 aaagatgggaattttattccaaggcatttaaaaaaaatatgtttgcttaacattataatatttctgggaaccataaaaata 20962453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 422
Target Start/End: Complemental strand, 31583404 - 31583263
Alignment:
Q  280 tgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgttt 379  Q
    ||||||||||| |||||||  | ||||||| ||| ||||||||||| ||| || |||||||||| ||| ||||||||||  ||||| |||||| || ||     
T  31583404 tgtgtttgttttaagtttactaaatttatttctacgaataacattctttgaaacataaagatggaaatattatttcaagatattta-gaaaaaaatattg 31583306  T
Q  380 ggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    | ||| | |||||||||||  ||||||| |||||||| |||||    
T  31583305 gtttaacattataatattctcaggaaccgtaaaaatagggatt 31583263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 376
Target Start/End: Complemental strand, 42012530 - 42012433
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatg 376  Q
    ||||||||||||||||||||  | |||||||  |||||||||||||  |||||||| ||||||||||||||| ||  |||| |||| | |||||||||    
T  42012530 gtgtgtttgtttcaagtttactaaatttatttttaggaataacattttttggaataaaaagatgggaattttgttctaaggtatttggaaaaaatatg 42012433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 416
Target Start/End: Original strand, 30899317 - 30899463
Alignment:
Q  270 aatctaagggtgtgtttgtttcaagtttatcacatttattcctaggaa-taacattccttggaatataaagatgggaattttatttcaaggaatttagga 368  Q
    ||||| ||| |||||||||||||||||||  | |||||||  || ||| |||||||  ||| |||||||||||| ||| |||||| ||| | |||||| |    
T  30899317 aatcttaggatgtgtttgtttcaagtttacaaaatttattgttaagaaataacattttttgaaatataaagatgagaaatttatt-caatgtatttagaa 30899415  T
Q  369 aaaatatgtttggttagctttataatattcctaggaaccataaaaata 416  Q
    |||| ||||||||||| |||||| ||||||  | ||||| ||||||||    
T  30899416 aaaagatgtttggttaactttattatattctcacgaaccttaaaaata 30899463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 342
Target Start/End: Complemental strand, 40276587 - 40276524
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatg 342  Q
    |||||||||||||||||||||  | |||||||| | | ||||||||||||| |||||||||||||    
T  40276587 ggtgtgtttgtttcaagtttactaaatttattcttggtaataacattcctt-gaatataaagatg 40276524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 5e-72; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 269 - 422
Target Start/End: Original strand, 44565760 - 44565913
Alignment:
Q  269 taatctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttagga 368  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  44565760 taatcttagggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatggaaattttattccaaggaatttagga 44565859  T
Q  369 aaaatatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44565860 aaaatatgtttggttagctttataatattcctaggaaccataaaaatatggatt 44565913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 274 - 422
Target Start/End: Complemental strand, 45265399 - 45265251
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  45265399 taagggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaat 45265300  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  45265299 atgtttggttagctttataatattcctaggaaccataaaaatagggatt 45265251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 272 - 422
Target Start/End: Original strand, 33378552 - 33378702
Alignment:
Q  272 tctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaa 371  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  33378552 tctaagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttatgaaaa 33378651  T
Q  372 atatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33378652 atatgtttggttagctttataatattcctaggaaccataaaaatagggatt 33378702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 277 - 422
Target Start/End: Complemental strand, 35488537 - 35488392
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatg 376  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  35488537 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatg 35488438  T
Q  377 tttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  35488437 tttggttagctttataatattcctaggaaccataaaaatagggatt 35488392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 273 - 422
Target Start/End: Original strand, 43948964 - 43949113
Alignment:
Q  273 ctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaa 372  Q
    |||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43948964 ctaagggtgtatttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaa 43949063  T
Q  373 tatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  43949064 tatgtttggttagctttataatattcctaggaaccataaaaatagggatt 43949113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 274 - 422
Target Start/End: Original strand, 11329713 - 11329861
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  11329713 taagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaat 11329812  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11329813 atgtttggttagctttataatattcctaggaaccataaaaatagggatt 11329861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 274 - 422
Target Start/End: Complemental strand, 25924988 - 25924840
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  25924988 taagggtgtgtttgtttcatgtttaccaaatttattcctaagaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaat 25924889  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25924888 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 25924840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 274 - 422
Target Start/End: Complemental strand, 28904537 - 28904389
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  28904537 taagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattctaaggaatttaggaaaaat 28904438  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28904437 atgtttggttaactttataatattcctaggaaccataaaaatatggatt 28904389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 278 - 422
Target Start/End: Complemental strand, 34930814 - 34930670
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  34930814 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttatgaaaaatatgt 34930715  T
Q  378 ttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  34930714 ttggttagctttataatattcctaggaaccataaaaatagggatt 34930670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 277 - 414
Target Start/End: Complemental strand, 27214203 - 27214066
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatg 376  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  27214203 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttatgaaaaatatg 27214104  T
Q  377 tttggttagctttataatattcctaggaaccataaaaa 414  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27214103 tttggttagctttataatattcctaggaaccataaaaa 27214066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 277 - 422
Target Start/End: Complemental strand, 48160921 - 48160776
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatg 376  Q
    ||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  48160921 gggtgtgtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttatgaaaaatatg 48160822  T
Q  377 tttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  48160821 tttggttagctttataatattcctaggaaccataaaaatagggatt 48160776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 280 - 422
Target Start/End: Original strand, 45045352 - 45045494
Alignment:
Q  280 tgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgttt 379  Q
    ||||||||||||||||||| || |||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  45045352 tgtgtttgtttcaagtttaccaaatttattcttaggaataatattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgttt 45045451  T
Q  380 ggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  45045452 ggttagctttataatattcctaggaaccataaaaatagggatt 45045494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 277 - 422
Target Start/End: Original strand, 45448665 - 45448810
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatg 376  Q
    |||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||    
T  45448665 gggtgtgtttgtttcaagtttaccaaatttattcctatgaataacattccttggaatataaagatgggaattttattctaaagaatttaggaaaaatatg 45448764  T
Q  377 tttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  45448765 tttggttagctttataatattcctaggaaccataaaaataaggatt 45448810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 274 - 422
Target Start/End: Original strand, 27248013 - 27248161
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||| ||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  27248013 taaggatgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttagaatataaagatgggaattttattccaaggaatttaggaaaaat 27248112  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||||| |||| ||||||||| |||||    
T  27248113 atgtttggttagctttataatattcctatgaactataaaaatagggatt 27248161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 274 - 422
Target Start/End: Original strand, 48313842 - 48313990
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  48313842 taagggtgtgtttgtttcaagtttatcaaatttatttctaggaataacatttcttggaatataaagatgagaattttattctaaggaatttaggaaaaat 48313941  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||    
T  48313942 atgtttggttagctttataatattccaaggaaccataaaaatagggatt 48313990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 276 - 422
Target Start/End: Original strand, 48341086 - 48341231
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||    
T  48341086 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaaga-gggaattttattccaaggaatttatgaaaaatat 48341184  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||    
T  48341185 gtttggttaactttataatattcctaggaaccataaaaatagggatt 48341231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 276 - 422
Target Start/End: Complemental strand, 38396714 - 38396569
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||| ||| ||||||||||| ||||||||||| |||||||||    
T  38396714 agggtgtgtttgtttcaagtttatcaaatttattcctaggaatagcattcattggaatataa-gataggaattttattccaaggaatttaagaaaaatat 38396616  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  38396615 gtttggttagctttataatattcctaggaaccataaaaatagggatt 38396569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 274 - 422
Target Start/End: Complemental strand, 41632710 - 41632567
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||||||||||||||||||||| || ||||||||     ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  41632710 taagggtgtgtttgtttcaagtttaccaaatttattc-----aataacattcctttgaatataaagatgggaattttattccaaggaatttaggaaaaat 41632616  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41632615 atgtttggttagctttataatattcctatgaaccataaaaatatggatt 41632567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 273 - 422
Target Start/End: Complemental strand, 9947343 - 9947193
Alignment:
Q  273 ctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttag-gaaaa 371  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||  ||||    
T  9947343 ctaagggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttgtaatataaagatgggaattttattccaaggaatgtagaaaaaa 9947244  T
Q  372 atatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  9947243 atatgtttggttagctttataatattcataggaaccataaaaatagggatt 9947193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 282 - 422
Target Start/End: Original strand, 39553910 - 39554051
Alignment:
Q  282 tgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttagg-aaaaatatgtttg 380  Q
    ||||||||| |||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||    
T  39553910 tgtttgtttgaagtttatcaaatttattcttagtaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaaatatttttg 39554009  T
Q  381 gttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  39554010 gttagctttataatattcctaggaaccataaaaatagggatt 39554051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 280 - 416
Target Start/End: Complemental strand, 30686336 - 30686200
Alignment:
Q  280 tgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgttt 379  Q
    ||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||  ||||||||| ||||| |||||||||||||||||||    
T  30686336 tgtgtttgttttaagtttatcaaatttatttctaggaataacattccttggaatataaagatgaaaattttattgcaaggtatttaggaaaaatatgttt 30686237  T
Q  380 ggttagctttataatattcctaggaaccataaaaata 416  Q
    ||||| |||||||||||||||||||||||||||||||    
T  30686236 ggttaactttataatattcctaggaaccataaaaata 30686200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 278 - 416
Target Start/End: Complemental strand, 27419571 - 27419433
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    ||||||||||||||||||||| || |||||||  ||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  27419571 ggtgtgtttgtttcaagtttaccaaatttatttttaggaataacatttcttggaatataaagatgggaattttattccaaagaatttagaaaaaatatgt 27419472  T
Q  378 ttggttagctttataatattcctaggaaccataaaaata 416  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  27419471 ttggttagctttataatattcctagggaccataaaaata 27419433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 280 - 422
Target Start/End: Complemental strand, 37534447 - 37534305
Alignment:
Q  280 tgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgttt 379  Q
    |||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  37534447 tgtgtttgtttcaagtttatcaaatttatttctagaaataacattccttggaatataaagatgagaattttatttcaaggtatttaggaaaaatatgttt 37534348  T
Q  380 ggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||| ||||||||||||| ||||||| |||| |||| |||||    
T  37534347 ggttaactttataatattcttaggaactataataatagggatt 37534305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 281 - 422
Target Start/End: Original strand, 38543920 - 38544062
Alignment:
Q  281 gtgtttgtttcaa-gtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgttt 379  Q
    ||||||||||||| |||||  | |||||||| ||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||    
T  38543920 gtgtttgtttcaaagtttactaaatttattcttaggaataacattccttggaatataaagatgagaattttattccaagaaatttaggaaaaatatgttt 38544019  T
Q  380 ggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  38544020 ggttagctttataatattcctaggaaccataaaaatagggatt 38544062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 281 - 416
Target Start/End: Original strand, 44819981 - 44820116
Alignment:
Q  281 gtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttg 380  Q
    |||||||||||||||||| || |||||||  |||||||||||||||||  |||||||||||| |||||||||| ||||||||||||||||||||| ||||    
T  44819981 gtgtttgtttcaagtttaccaaatttatttttaggaataacattccttaaaatataaagatgagaattttattccaaggaatttaggaaaaatatatttg 44820080  T
Q  381 gttagctttataatattcctaggaaccataaaaata 416  Q
    ||||||||||||||||||||||||||||||||||||    
T  44820081 gttagctttataatattcctaggaaccataaaaata 44820116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 314 - 422
Target Start/End: Complemental strand, 8419900 - 8419792
Alignment:
Q  314 ggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataaaa 413  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8419900 ggaataacattccttggaatataaagatgggaattttattccaagaaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataaaa 8419801  T
Q  414 atatggatt 422  Q
    ||| |||||    
T  8419800 atagggatt 8419792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 282 - 422
Target Start/End: Original strand, 25097796 - 25097937
Alignment:
Q  282 tgtttgtttcaagtttatcacatttattcctaggaataacattcctt-ggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttg 380  Q
    ||||||||| ||||||| || |||||||||||||||||| |||  || |||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  25097796 tgtttgttttaagtttaccaaatttattcctaggaataatatttttttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 25097895  T
Q  381 gttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||||||||| ||| |||||    
T  25097896 gttagctttataatattcctaggaaccataaatatagggatt 25097937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 304 - 416
Target Start/End: Complemental strand, 9814535 - 9814423
Alignment:
Q  304 tttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctagg 403  Q
    ||||||||||||||||||||| |||||||||||||||||  |||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9814535 tttattcctaggaataacatttcttggaatataaagatgacaattttattctaaggaatttaggaaaaatatgtttgattagctttataatattcctagg 9814436  T
Q  404 aaccataaaaata 416  Q
    |||||||||||||    
T  9814435 aaccataaaaata 9814423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 273 - 416
Target Start/End: Complemental strand, 31922078 - 31921933
Alignment:
Q  273 ctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatggga--attttatttcaaggaatttaggaaa 370  Q
    ||||||||||||||||||||||||||||| ||||||| | | ||||||||||| |||||||||||| ||||||  |||||||| ||||| |||||| |||    
T  31922078 ctaagggtgtgtttgtttcaagtttatcaaatttattaccatgaataacattctttggaatataaatatgggagaattttattccaaggtatttagaaaa 31921979  T
Q  371 aatatgtttggttagctttataatattcctaggaaccataaaaata 416  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||||    
T  31921978 aatatgtatggttaactttataatatttctaggaaccataaaaata 31921933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 282 - 403
Target Start/End: Original strand, 18823890 - 18824011
Alignment:
Q  282 tgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttgg 381  Q
    ||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||| |||||||||||||||||||||    
T  18823890 tgtttgtttcaagtttaccaaatttattcctaggaataacattctttggaatataaagatgagaattttattctaaggtatttaggaaaaatatgtttgg 18823989  T
Q  382 ttagctttataatattcctagg 403  Q
    ||| ||||||||||||| ||||    
T  18823990 ttaactttataatattcatagg 18824011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 322 - 422
Target Start/End: Original strand, 40212657 - 40212757
Alignment:
Q  322 attccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataaaaatatggat 421  Q
    |||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40212657 attcctaggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataaaaatagggat 40212756  T
Q  422 t 422  Q
    |    
T  40212757 t 40212757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 270 - 422
Target Start/End: Complemental strand, 40385982 - 40385830
Alignment:
Q  270 aatctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaa 369  Q
    ||||||| ||||||| | |||||||| ||||| |||||||| ||| |||||||||  |||||||||||||||| ||||||||||| |||| |||||  ||    
T  40385982 aatctaaaggtgtgtctctttcaagtgtatcaaatttattcttagtaataacattttttggaatataaagatgagaattttattttaaggtatttaaaaa 40385883  T
Q  370 aaatatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||| || |||||||| | |||||||||||||| ||||||||||||||||||||    
T  40385882 aaagatatttggttaacattataatattcctaagaaccataaaaatatggatt 40385830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 272 - 422
Target Start/End: Complemental strand, 17276512 - 17276361
Alignment:
Q  272 tctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaa 371  Q
    |||||||||||||||||||||| ||||  | ||||||| |||||||||||||||||||||||||| |||||  ||||||||| ||||  |||||| ||||    
T  17276512 tctaagggtgtgtttgtttcaattttacaaaatttatttctaggaataacattccttggaatatatagatgtaaattttattccaagatatttagaaaaa 17276413  T
Q  372 atatgtttgg-ttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    | |||||||| ||| | |||||||||||| || |||| |||||||| |||||    
T  17276412 agatgtttggtttaacattataatattccaagaaaccttaaaaataaggatt 17276361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 277 - 422
Target Start/End: Complemental strand, 6656819 - 6656673
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcctaggaataa-cattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    |||||||||| |||||||||||  | |||||||| ||||||||| |||||||||||||| ||| ||| |||||||||| ||||| |||| | ||||||||    
T  6656819 gggtgtgtttctttcaagtttactaaatttattcttaggaataaacattccttggaatagaaatatgagaattttattccaaggtatttggaaaaaatat 6656720  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||| |||| |||||||||||| ||| |||||| |||||||| ||||    
T  6656719 gttttgttaactttataatatttctaagaaccaaaaaaatatagatt 6656673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 280 - 416
Target Start/End: Original strand, 31598449 - 31598585
Alignment:
Q  280 tgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgttt 379  Q
    ||||||||||| ||||||| || |||||||  | ||||||||||| |||||||||||||||| ||||||||||||||||| |||||  ||||| ||||||    
T  31598449 tgtgtttgttttaagtttaccaaatttatttttgggaataacatttcttggaatataaagataggaattttatttcaaggtatttaaaaaaaagatgttt 31598548  T
Q  380 ggttagctttataatattcctaggaaccataaaaata 416  Q
    | ||| | ||||||||| ||| |||| ||||||||||    
T  31598549 gtttaacattataatatacctgggaatcataaaaata 31598585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 276 - 422
Target Start/End: Complemental strand, 5543479 - 5543334
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||| ||||||| || ||||||| ||| ||||| ||||  ||| || ||||||||| |||||||||| ||||| |||||| ||||| ||    
T  5543479 agggtgtgtttgttttaagtttaccaaatttatttctaagaatatcattatttgaaacataaagatgagaattttatt-caaggtatttagaaaaaagat 5543381  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||| ||| | ||||||| ||||  |||||||||||||||||||||    
T  5543380 gtttgcttaacattataatgttcccgggaaccataaaaatatggatt 5543334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 274 - 422
Target Start/End: Original strand, 45722879 - 45723018
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||||| ||| ||||||||||| || |||||||  |||||||||||||||||| ||||||||||||| ||||||||| |         || ||||||    
T  45722879 taagggtgtctttatttcaagtttaccaaatttatttttaggaataacattccttgaaatataaagatggaaattttattcc---------agaaaaaat 45722969  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||  ||| ||||||||||||||||| || ||||||||||||||||    
T  45722970 atgtttaattaactttataatattcctagaaatcataaaaatatggatt 45723018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 398
Target Start/End: Complemental strand, 43446229 - 43446109
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatg 376  Q
    |||| ||||||||| |||| || || ||| ||| ||| ||||||||||  | ||||||||||||| |||||||||||| |||| ||||| ||||||||||    
T  43446229 gggtttgtttgtttaaagtgtaccaaattgatttctatgaataacatttatcggaatataaagataggaattttattttaaggtattta-gaaaaatatg 43446131  T
Q  377 tttggttagctttataatattc 398  Q
    |||||||| | |||||||||||    
T  43446130 tttggttaacattataatattc 43446109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 16916237 - 16916182
Alignment:
Q  273 ctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattcctt 328  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  16916237 ctaagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattcctt 16916182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 283 - 422
Target Start/End: Complemental strand, 22156520 - 22156382
Alignment:
Q  283 gtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggt 382  Q
    ||||||||||| ||||||| |||||||  |||||||||||||  |||||||||||||||  ||||||||||  |||| || || |||||| ||||||| |    
T  22156520 gtttgtttcaaatttatcaaatttatttttaggaataacattttttggaatataaagataagaattttattctaaggtatata-gaaaaaaatgtttgtt 22156422  T
Q  383 tagctttataatattcctaggaaccataaaaatatggatt 422  Q
    || |  ||||||||||    ||||||||||||||||||||    
T  22156421 taacagtataatattcacgagaaccataaaaatatggatt 22156382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 283 - 422
Target Start/End: Complemental strand, 22212435 - 22212297
Alignment:
Q  283 gtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggt 382  Q
    ||||||||||| ||||||| |||||||  |||||||||||||  |||||||||||||||  ||||||||||  |||| || || |||||| ||||||| |    
T  22212435 gtttgtttcaaatttatcaaatttatttttaggaataacattttttggaatataaagataagaattttattctaaggtatata-gaaaaaaatgtttgtt 22212337  T
Q  383 tagctttataatattcctaggaaccataaaaatatggatt 422  Q
    || |  ||||||||||    ||||||||||||||||||||    
T  22212336 taacagtataatattcacgagaaccataaaaatatggatt 22212297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 418
Target Start/End: Complemental strand, 10902971 - 10902879
Alignment:
Q  326 cttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataaaaatatg 418  Q
    ||||| ||||||||||| ||||||||   ||||| ||||| |||||| ||||||||||| | ||||||||||| | |||||| ||||||||||    
T  10902971 cttgggatataaagatgtgaattttagcccaaggtatttatgaaaaagatgtttggttaacattataatattcattggaaccttaaaaatatg 10902879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 276 - 319
Target Start/End: Original strand, 40212626 - 40212669
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaata 319  Q
    ||||||||||||||||||||||| || |||||||||||||||||    
T  40212626 agggtgtgtttgtttcaagtttaccaaatttattcctaggaata 40212669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 386 - 422
Target Start/End: Complemental strand, 16825593 - 16825557
Alignment:
Q  386 ctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||| |||||    
T  16825593 ctttataatattcctaggaaccataaaaatagggatt 16825557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 368 - 416
Target Start/End: Complemental strand, 41684278 - 41684230
Alignment:
Q  368 aaaaatatgtttggttagctttataatattcctaggaaccataaaaata 416  Q
    |||||||||||||||||  |||||||||||  |||||||||||||||||    
T  41684278 aaaaatatgtttggttaattttataatatttataggaaccataaaaata 41684230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 422
Target Start/End: Original strand, 45440637 - 45440776
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtt 378  Q
    |||||||||||||| ||||| || |||||||| ||| ||||||||| ||| |||||||  ||||  ||||||||| ||||  |||||  ||||| |||||    
T  45440637 gtgtgtttgtttca-gtttaccaaatttattcatagtaataacatttcttagaatata--gatgtaaattttattccaagatatttaa-aaaaagatgtt 45440732  T
Q  379 tggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    || ||| | |||||||||||| || |||| ||||| || |||||    
T  45440733 tgattaacattataatattccaagtaaccttaaaactagggatt 45440776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 398
Target Start/End: Complemental strand, 38529012 - 38528931
Alignment:
Q  316 aataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttataatattc 398  Q
    ||||||||| ||||||||||||| |||  |||||||||||||   |||||  ||||| ||||||||||| | |||||||||||    
T  38529012 aataacatttcttggaatataaaaatgtaaattttatttcaacttattta-aaaaaaaatgtttggttaacattataatattc 38528931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 135; Significance: 3e-70; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 274 - 416
Target Start/End: Original strand, 18897641 - 18897783
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18897641 taagggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaat 18897740  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaata 416  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18897741 atgtttggttagctttataatattcctaggaaccataaaaata 18897783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 270 - 422
Target Start/End: Complemental strand, 10246471 - 10246319
Alignment:
Q  270 aatctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaa 369  Q
    ||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10246471 aatcttagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaa 10246372  T
Q  370 aaatatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  10246371 aaatatgtttggttagctttataatattcctaggaaccataaaattagggatt 10246319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 276 - 422
Target Start/End: Original strand, 2657422 - 2657568
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  2657422 agggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatat 2657521  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||| ||||||||||||||||| || ||||||||||||||||    
T  2657522 gtttggttaactttataatattcctagtaatcataaaaatatggatt 2657568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 279 - 422
Target Start/End: Original strand, 14170740 - 14170883
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtt 378  Q
    |||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14170740 gtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtt 14170839  T
Q  379 tggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  14170840 tggttagctttataatattcctaggaaccataaaaatagggatt 14170883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 276 - 422
Target Start/End: Original strand, 1316741 - 1316887
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||    
T  1316741 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattctttggaatataaagatgagaattttattccaaggaatttaggaaaaatat 1316840  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  1316841 gtttggttagctttataatattcctaggaaccataaaaatagggatt 1316887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 276 - 422
Target Start/End: Complemental strand, 7053927 - 7053781
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||    
T  7053927 agggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaatatgggaattttattccaaggaatttatgaaaaatat 7053828  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  7053827 gtttggttagctttataatattcctaggaaccataaaaatagggatt 7053781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 276 - 422
Target Start/End: Original strand, 8029025 - 8029171
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  8029025 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatggaaattttattccaagaaatttaggaaaaatat 8029124  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||    
T  8029125 gtttggttggctttataatattcctaggaaccataaaaatagggatt 8029171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 278 - 422
Target Start/End: Original strand, 16968649 - 16968793
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  16968649 ggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattctttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgt 16968748  T
Q  378 ttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||    
T  16968749 ttggttagctttataatattcttaggaaccataaaaatagggatt 16968793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 292 - 396
Target Start/End: Complemental strand, 7344827 - 7344723
Alignment:
Q  292 aagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttat 391  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||  ||||||||||||||||||||||||||||||||||||    
T  7344827 aagtttatcaaatttattcctaggaataacattccttggaatataaatatgagaattttattctaaggaatttaggaaaaatatgtttggttagctttat 7344728  T
Q  392 aatat 396  Q
    |||||    
T  7344727 aatat 7344723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 273 - 414
Target Start/End: Complemental strand, 6706104 - 6705963
Alignment:
Q  273 ctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaa 372  Q
    |||||||| ||||||||||||||||| ||  |||||| ||||||||||||||||||| |||||||||||| ||||||||||  |||| |||||| |||||    
T  6706104 ctaagggtatgtttgtttcaagtttaccaattttatttctaggaataacattccttgaaatataaagatgagaattttattctaaggtatttagaaaaaa 6706005  T
Q  373 tatgtttggttagctttataatattcctaggaaccataaaaa 414  Q
    ||| |||||||| |||||||||||||||| |||| |||||||    
T  6706004 tatatttggttaactttataatattcctaagaactataaaaa 6705963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 282 - 396
Target Start/End: Complemental strand, 21008322 - 21008208
Alignment:
Q  282 tgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttgg 381  Q
    |||||||||||||||||| | |||||||  || |||||||||| ||||||||||||||||| |||||||||| ||||| |||||| ||||||||||||||    
T  21008322 tgtttgtttcaagtttattaaatttatttttatgaataacatttcttggaatataaagatgagaattttattccaaggcatttagaaaaaatatgtttgg 21008223  T
Q  382 ttagctttataatat 396  Q
    ||| |||||||||||    
T  21008222 ttaactttataatat 21008208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 279 - 413
Target Start/End: Complemental strand, 14781955 - 14781822
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtt 378  Q
    ||||||||||||||  |||| || |||||||||| |||||||||||| |||||| ||||||||| |||||||||| ||||| |||||| ||||| |||||    
T  14781955 gtgtgtttgtttcat-tttaccaaatttattcctgggaataacattcattggaacataaagatgagaattttattccaaggtatttagaaaaaagatgtt 14781857  T
Q  379 tggttagctttataatattcctaggaaccataaaa 413  Q
    || ||| | ||||||||||||| ||||||||||||    
T  14781856 tgcttaacattataatattcctgggaaccataaaa 14781822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 273 - 416
Target Start/End: Complemental strand, 9762392 - 9762248
Alignment:
Q  273 ctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttag-gaaaa 371  Q
    |||| ||||||||||||||||||||| ||  ||||||  |||||||||||||||||||| |||||| ||| ||||||||||  |||| ||||||  ||||    
T  9762392 ctaacggtgtgtttgtttcaagtttaccaagtttattattaggaataacattccttggattataaatatgtgaattttattcaaaggtatttagataaaa 9762293  T
Q  372 atatgtttggttagctttataatattcctaggaaccataaaaata 416  Q
    | ||| |||| || | |||||||||||  | ||||| ||||||||    
T  9762292 agatgattgggtaacattataatattctcatgaaccttaaaaata 9762248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 278 - 338
Target Start/End: Complemental strand, 11570131 - 11570071
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaa 338  Q
    ||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  11570131 ggtgtctttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaa 11570071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 273 - 422
Target Start/End: Original strand, 8314613 - 8314762
Alignment:
Q  273 ctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaa 372  Q
    ||||||||  |||||||| |||||||||| |||||||||||| | ||||||| |||| |||||| | |||  |||||||||  |||  |||||| |||||    
T  8314613 ctaagggtacgtttgttttaagtttatcaaatttattcctagaattaacattacttgcaatatacacatgtaaattttattctaagatatttagaaaaaa 8314712  T
Q  373 tatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
     |||||| |||| | |||||||| | | ||||||| |||||||| |||||    
T  8314713 aatgtttagttaacattataataattcaaggaaccttaaaaatagggatt 8314762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 407
Target Start/End: Original strand, 12328063 - 12328194
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||| ||| |||||||| |||| || ||||||| |||| |||||||||| ||| |||||||||||| |||||| | ||||| | |||||| ||| |     
T  12328063 taagggtctgtctgtttcaaatttaccaaatttatttctagtaataacattctttg-aatataaagatgtgaatttca-ttcaatgtatttagaaaagag 12328160  T
Q  374 atgtttggttagctttataatattcctaggaacc 407  Q
    ||||||| ||| | |||||||||||  |||||||    
T  12328161 atgtttgattaacgttataatattctaaggaacc 12328194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 416
Target Start/End: Complemental strand, 346130 - 346039
Alignment:
Q  327 ttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcct-agg-aaccataaaaata 416  Q
    |||||||||||||||| ||||||||||  |||  |||||| ||||| ||||||| ||| | |||||| |||||| ||| |||||||||||||    
T  346130 ttggaatataaagatgagaattttattctaagacatttagaaaaaagatgtttgcttaacattataacattcctgaggaaaccataaaaata 346039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 355
Target Start/End: Original strand, 3869218 - 3869297
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttc 355  Q
    |||| ||||||||||||||||||  | ||||||||| | ||||||| ||||| | ||||||| |||| || |||||||||    
T  3869218 agggggtgtttgtttcaagtttagtagatttattcccaagaataactttcctggaaatataaggatgagagttttatttc 3869297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 422
Target Start/End: Complemental strand, 7344320 - 7344286
Alignment:
Q  388 ttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||| |||||    
T  7344320 ttataatattcctaggaaccataaaaatagggatt 7344286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 135; Significance: 3e-70; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 272 - 422
Target Start/End: Original strand, 8331733 - 8331883
Alignment:
Q  272 tctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaa 371  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  8331733 tctaagggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaagaatttaggaaaa 8331832  T
Q  372 atatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8331833 atatgtttggttagctttataatattcctaggaaccataaaaatagggatt 8331883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 276 - 422
Target Start/End: Complemental strand, 5806625 - 5806479
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5806625 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatat 5806526  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  5806525 gtttggttagctttataatattcctaggaaccataaaaatagggatt 5806479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 274 - 422
Target Start/End: Complemental strand, 12190528 - 12190380
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12190528 taagggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaat 12190429  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||    
T  12190428 atgtttggttagctttataatattccaaggaaccataaaaatagggatt 12190380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 272 - 422
Target Start/End: Original strand, 9115556 - 9115706
Alignment:
Q  272 tctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaa 371  Q
    |||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  9115556 tctaggggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaa 9115655  T
Q  372 atatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9115656 atatgtttggttagctttataatattcctaggaaccataaaaatagggatt 9115706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 276 - 422
Target Start/End: Original strand, 47031582 - 47031728
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  47031582 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatat 47031681  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  47031682 gtttggttagctttataatattcctaggaaccataaaaatagggatt 47031728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 277 - 422
Target Start/End: Original strand, 25789487 - 25789632
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatg 376  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  25789487 gggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatatg 25789586  T
Q  377 tttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  25789587 tttggttagctttataatattcctaggaaccataaaaatagggatt 25789632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 274 - 422
Target Start/End: Original strand, 14788444 - 14788592
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||||||||||||| ||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14788444 taagggtgtgtttgttttaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggcaaaat 14788543  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14788544 atgtttggttagctttataatattcctaggaaccataaaaatagggatt 14788592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 279 - 422
Target Start/End: Complemental strand, 9832216 - 9832073
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtt 378  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  9832216 gtgtgtttgtttcaagtttatcaaatttattcctaggaataacattcctcggaatataaagatgggaattttattccaaggaatttaagaaaaatatgtt 9832117  T
Q  379 tggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  9832116 tggttagctttataatattcctaggaaccataaaaatagggatt 9832073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 276 - 422
Target Start/End: Original strand, 6911208 - 6911354
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  6911208 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttatgaaaaatat 6911307  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||    
T  6911308 gtttggttagctttttaatattcctaggaaccataaaaatagggatt 6911354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 276 - 422
Target Start/End: Original strand, 36361506 - 36361652
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  36361506 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaaaatgggaattttattccaaggaatttaggaaaaatat 36361605  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||    
T  36361606 gtttggttagctttataatattcctatgaaccataaaaatagggatt 36361652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 276 - 422
Target Start/End: Original strand, 46666431 - 46666577
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  46666431 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattctaaggaatttaggaaaaatat 46666530  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  46666531 gtttggttagctttataatattcctaggaaccataaaaatagggatt 46666577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 274 - 416
Target Start/End: Original strand, 52630494 - 52630636
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  52630494 taagggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaat 52630593  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaata 416  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  52630594 atgtttggttagctttataatattcctaggaaccataaaaata 52630636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 277 - 422
Target Start/End: Complemental strand, 20260434 - 20260289
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatg 376  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  20260434 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagaaatttaggaaaaatatg 20260335  T
Q  377 tttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||    
T  20260334 tttgcttagctttataatattcctaggaaccataaaaatagggatt 20260289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 277 - 422
Target Start/End: Original strand, 39930181 - 39930326
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatg 376  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  39930181 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattctttggaatataaagatgggaattttattccaaggaatttaagaaaaatatg 39930280  T
Q  377 tttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  39930281 tttggttagctttataatattcctaggaaccataaaaatagggatt 39930326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 276 - 422
Target Start/End: Original strand, 32824644 - 32824790
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    |||||||||||||||||| ||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  32824644 agggtgtgtttgtttcaaatttacgaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaagaaaaatat 32824743  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  32824744 gtttggttagctttataatattcctaggaaccataaaaatagggatt 32824790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 278 - 422
Target Start/End: Complemental strand, 32202660 - 32202516
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    |||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||    
T  32202660 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgagaattttattccaagaaatttaggaaaaatatgt 32202561  T
Q  378 ttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  32202560 ttggttagctttataatattcctaggaaccataaaaatagggatt 32202516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 276 - 422
Target Start/End: Complemental strand, 50191113 - 50190967
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||    
T  50191113 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttagaatataaagatgagaattttatttcgaggaatttaggaaaaatat 50191014  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||| |||||||||||||||||||||||| |||||||||| |||||    
T  50191013 gtttgattagctttataatattcctaggaatcataaaaatagggatt 50190967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 280 - 422
Target Start/End: Complemental strand, 51445424 - 51445282
Alignment:
Q  280 tgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgttt 379  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||    
T  51445424 tgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatatatagatgagaattttattccaaggaatttaggaaaaatatgttt 51445325  T
Q  380 ggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||| ||||||||||||||||||||||||||||||| |||||    
T  51445324 ggttacctttataatattcctaggaaccataaaaatagggatt 51445282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 278 - 422
Target Start/End: Complemental strand, 1597689 - 1597545
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    ||||||||||||||||||||| || |||||||  |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  1597689 ggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttgaaatataaagatgggaattttattccaaggaatttaggaaaaatatgt 1597590  T
Q  378 ttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||    
T  1597589 ttggttaactttataatattcttaggaaccataaaaatatggatt 1597545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 275 - 405
Target Start/End: Original strand, 25473977 - 25474107
Alignment:
Q  275 aagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaata 374  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||    
T  25473977 aagggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaagaatttaggaaaaata 25474076  T
Q  375 tgtttggttagctttataatattcctaggaa 405  Q
    ||||||||||||||||||||||||| |||||    
T  25474077 tgtttggttagctttataatattccaaggaa 25474107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 279 - 422
Target Start/End: Original strand, 2430223 - 2430365
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtt 378  Q
    ||||||||||||||||||||  | ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  2430223 gtgtgtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttattccaaggaatttaggaaaattatgtt 2430322  T
Q  379 tggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||| |||||||||||||||||||||||| |||||    
T  2430323 tggttagctttat-atattcctaggaaccataaaaatagggatt 2430365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 280 - 422
Target Start/End: Complemental strand, 4683718 - 4683576
Alignment:
Q  280 tgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgttt 379  Q
    |||| ||||||||||||||||| ||||||| ||| ||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4683718 tgtgattgtttcaagtttatcaaatttatttctaagaataacattttttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgttt 4683619  T
Q  380 ggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||| ||||||||||||||||| |||||    
T  4683618 ggttagctttataatattcttaggaaccataaaaatagggatt 4683576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 277 - 422
Target Start/End: Complemental strand, 38965027 - 38964882
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatg 376  Q
    |||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||     
T  38965027 gggtgtgtttgttttaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaatatatc 38964928  T
Q  377 tttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||| |||||||||||||||||||  ||||||||||||| |||||    
T  38964927 tttggatagctttataatattcctaataaccataaaaatagggatt 38964882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 278 - 422
Target Start/End: Complemental strand, 37436966 - 37436822
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    ||||||||||||||||||||| || |||||||| || |||||||||||||||||||||||| |||| |||||||||||||||  ||||||||||||||||    
T  37436966 ggtgtgtttgtttcaagtttaccaaatttattcttaagaataacattccttggaatataaatatggaaattttatttcaaggtgtttaggaaaaatatgt 37436867  T
Q  378 ttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||| ||||||||||||| ||||||||||||||||| |||||    
T  37436866 ttggttaactttataatattcttaggaaccataaaaataaggatt 37436822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 276 - 422
Target Start/End: Complemental strand, 5518852 - 5518706
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||| ||||||||| ||||||| || |||||||| | |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  5518852 agggtctgtttgtttgaagtttaccaaatttattcattggaataacattccttggaatataaagatgggaattttattccaaggtatttaggaaaaatat 5518753  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||| ||||| |||||||| |||||||||||||||||||||| |||||    
T  5518752 gttcggttaactttataacattcctaggaaccataaaaatagggatt 5518706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 283 - 422
Target Start/End: Original strand, 13653581 - 13653721
Alignment:
Q  283 gtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaa-ttttatttcaaggaatttaggaaaaatatgtttgg 381  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| | ||||||||||||||    
T  13653581 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaatttttatttcaaggtatttggaaaaaatatgtttgg 13653680  T
Q  382 ttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||| |||||||||||||||||||||||||||| || |||||    
T  13653681 ttaactttataatattcctaggaaccataaaattagggatt 13653721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 276 - 416
Target Start/End: Original strand, 29091395 - 29091535
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || |||||||| |||||||||||||||||  ||||||||||||||||||||||| ||||| |||||  ||||||||    
T  29091395 agggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttaaaatataaagatgggaattttattccaaggtatttataaaaaatat 29091494  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaata 416  Q
    ||||||||| |||||||||||| ||||||||||||||||||    
T  29091495 gtttggttaactttataatattactaggaaccataaaaata 29091535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 279 - 422
Target Start/End: Complemental strand, 48916368 - 48916224
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttag-gaaaaatatgt 377  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| |||||||||| ||||| ||||||  ||||||||||    
T  48916368 gtgtgtttgtttcaagtttatcaaatttattcttaggaataacattccttagaatataaagatgagaattttattccaaggtatttagaaaaaaatatgt 48916269  T
Q  378 ttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||| ||||||||||||||||| ||||||||||||| |||||    
T  48916268 ttggttaactttataatattcctagaaaccataaaaatagggatt 48916224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 276 - 422
Target Start/End: Original strand, 2632576 - 2632722
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||| |||||||||||||||  | ||||||| |||||||||||||||||| ||||||||| |||||||||||||| ||  |||||||||||||||||    
T  2632576 agggtgtatttgtttcaagtttactaaatttatttctaggaataacattccttagaatataaatatgggaattttattccagcgaatttaggaaaaatat 2632675  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||| |||||||||||| |||||||||||||||||| |||||    
T  2632676 gtttggttaactttataatatttctaggaaccataaaaatagggatt 2632722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 318 - 422
Target Start/End: Complemental strand, 49823203 - 49823099
Alignment:
Q  318 taacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataaaaatat 417  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||     
T  49823203 taacattccttggaatataaagatgggaattttattccatggaatttagaaaaaatatgtttggttaggtttataatattcctaggaaccataaaaatag 49823104  T
Q  418 ggatt 422  Q
    |||||    
T  49823103 ggatt 49823099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 279 - 422
Target Start/End: Original strand, 35187181 - 35187325
Alignment:
Q  279 gtgtgtttgtttcaa-gtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    ||||||||||||||| ||||| || |||||||| ||||||||| ||| |||| ||||||||||||| |||||||||  || |||||||||||| ||||||    
T  35187181 gtgtgtttgtttcaaagtttaccaaatttattcttaggaataatatttcttgaaatataaagatggaaattttattctaaagaatttaggaaatatatgt 35187280  T
Q  378 ttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||| |||||||||||||||| ||||||||||||| |||||    
T  35187281 ttggttagttttataatattcctagaaaccataaaaatagggatt 35187325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 291 - 416
Target Start/End: Complemental strand, 52699799 - 52699674
Alignment:
Q  291 caagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagcttta 390  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||| ||||||| ||||| ||| | |||    
T  52699799 caagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggtatttagaaaaaataagtttgcttaacatta 52699700  T
Q  391 taatattcctaggaaccataaaaata 416  Q
    |||||||||| |||||||| ||||||    
T  52699699 taatattcctgggaaccatgaaaata 52699674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 274 - 416
Target Start/End: Original strand, 46960349 - 46960492
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttag-gaaaaa 372  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| ||| |||||| ||||  ||||||  |||||    
T  46960349 taagggtgtgtttgtttcaaatttatcaaatttattcctaggaataacattctttggaatataaagatgagaaatttattccaagatatttagaaaaaaa 46960448  T
Q  373 tatgtttggttagctttataatattcctaggaaccataaaaata 416  Q
     ||||||||||| | |||||||||||| | ||||| ||||||||    
T  46960449 gatgtttggttaacattataatattccaatgaaccttaaaaata 46960492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 278 - 422
Target Start/End: Original strand, 39329347 - 39329477
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||              || |||||||||||| ||||||||||    
T  39329347 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaataaaa--------------ttccaaggaatttagaaaaaatatgt 39329432  T
Q  378 ttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  39329433 ttggttagctttataatattcctaggaaccataaaaatagggatt 39329477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 279 - 422
Target Start/End: Complemental strand, 1228225 - 1228080
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttag--gaaaaatatg 376  Q
    |||||||||||| ||||||| || ||||||| ||| ||||||| |||||||||||||||||||| |||||||||| ||| ||||||||   |||||||||    
T  1228225 gtgtgtttgttttaagtttaccaaatttatttctatgaataaccttccttggaatataaagatgagaattttattccaaagaatttagaaaaaaaatatg 1228126  T
Q  377 tttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||| | |||||||||||| | ||||||| |||||||| |||||    
T  1228125 tttggtgaactttataatatttcaaggaaccttaaaaatagggatt 1228080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 333 - 422
Target Start/End: Original strand, 6978550 - 6978639
Alignment:
Q  333 tataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  6978550 tataaagatgagaattttattccaagaaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataaaattagggatt 6978639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 277 - 422
Target Start/End: Original strand, 47677368 - 47677513
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatg 376  Q
    |||||||||| ||| |||||||| | |||||||| ||||||||| ||| ||||||||||||||||| |||||||||| ||||  |||||  |||||||||    
T  47677368 gggtgtgtttatttaaagtttatgaaatttattcttaggaataaaatttcttggaatataaagatgagaattttattccaagatatttaaaaaaaatatg 47677467  T
Q  377 tttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||| |||| ||||||||  ||||||| |||||||| |||||    
T  47677468 tttggttaactttgtaatattctaaggaaccttaaaaatagggatt 47677513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 349 - 422
Target Start/End: Complemental strand, 3572841 - 3572768
Alignment:
Q  349 ttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3572841 ttattccaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataaaaatagggatt 3572768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 276 - 416
Target Start/End: Complemental strand, 24116683 - 24116543
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||| ||||||| || |||||||| || |||||||||||||| ||||||||||||| |||||||||||||||| || ||| ||||| ||    
T  24116683 agggtgtgtttgttttaagtttaacaaatttattcttaagaataacattccttagaatataaagatgagaattttatttcaaggtatatagaaaaaagat 24116584  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaata 416  Q
    ||||| ||| | ||| ||||||  | | |||||||||||||    
T  24116583 gtttgcttaacattaaaatatttttggaaaccataaaaata 24116543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 279 - 422
Target Start/End: Original strand, 48462258 - 48462400
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtt 378  Q
    |||| ||||||| |||||||||| |||||||  || ||||||||||| ||||| |||||||||| ||||| |||| |||  | ||||| |||||||||||    
T  48462258 gtgtatttgttttaagtttatcaaatttatttttatgaataacattctttggagtataaagatgagaattatattccaaata-tttagaaaaaatatgtt 48462356  T
Q  379 tggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||| ||||||||||||  ||||||||||||||||| |||||    
T  48462357 tggttaactttataatatttgtaggaaccataaaaataaggatt 48462400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 275 - 416
Target Start/End: Complemental strand, 17475659 - 17475517
Alignment:
Q  275 aagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttag-gaaaaat 373  Q
    ||||||||||| ||||||||||||||| ||||||||||| |||||||||||  ||||| ||||| |||| ||||||||| ||||| ||||||  |||||     
T  17475659 aagggtgtgttcgtttcaagtttatcaaatttattcctaagaataacattctatggaaaataaaaatggaaattttattccaaggtatttagaaaaaaag 17475560  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaata 416  Q
    ||||||| ||| | |||| |||||||  ||||| |||||||||    
T  17475559 atgtttgcttaacattatgatattcccgggaactataaaaata 17475517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 273 - 422
Target Start/End: Original strand, 49627294 - 49627444
Alignment:
Q  273 ctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttagga-aaa 371  Q
    |||||| |||||||||||||| |||| || |||||||  || |||||||||| ||||||||||||||||||||||||||||  |  | |||||  | |||    
T  49627294 ctaaggatgtgtttgtttcaaatttaccaaatttatttttaagaataacatttcttggaatataaagatgggaattttattgtagagtatttaaaagaaa 49627393  T
Q  372 atatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    | ||||||||||| | |||||||||| | | ||||||||||||||||||||    
T  49627394 aaatgtttggttaacattataatatttcaaagaaccataaaaatatggatt 49627444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 279 - 384
Target Start/End: Complemental strand, 13932218 - 13932111
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttag--gaaaaatatg 376  Q
    ||||||||||||||||||||||| ||||||| | ||||||||||||| ||| ||||||||||||| || |||||||||||| ||| ||   |||||||||    
T  13932218 gtgtgtttgtttcaagtttatcaaatttatttcaaggaataacattcattgaaatataaagatggaaactttatttcaaggtattcagaaaaaaaatatg 13932119  T
Q  377 tttggtta 384  Q
    ||||||||    
T  13932118 tttggtta 13932111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 274 - 422
Target Start/End: Original strand, 37261540 - 37261688
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||| |||||||||||||||||||||| |||||||  || || |||||||| |||||||||||| ||| ||||||||||   ||  |||||| |||||     
T  37261540 taaggatgtgtttgtttcaagtttatcaaatttatttttatgattaacattcattggaatataaatatgtgaattttattcttagatatttagaaaaaag 37261639  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||   |||||||||||| | ||||  ||||||||||||||    
T  37261640 atgtttggttaatattataatattccaaagaacgttaaaaatatggatt 37261688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 280 - 422
Target Start/End: Complemental strand, 38519405 - 38519263
Alignment:
Q  280 tgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgttt 379  Q
    |||||||||||||| |||| || |||||||| |||||||||||||  |||||| ||||| |||  ||||||||| ||| | |||||| ||||| ||||||    
T  38519405 tgtgtttgtttcaaatttaccaaatttattcgtaggaataacattttttggaacataaaaatgaaaattttattccaatgtatttagaaaaaagatgttt 38519306  T
Q  380 ggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    | ||| | ||||||||||| | | ||||||||||||| |||||    
T  38519305 gtttaacattataatattcttggaaaccataaaaatagggatt 38519263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 292 - 417
Target Start/End: Complemental strand, 45813727 - 45813602
Alignment:
Q  292 aagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttat 391  Q
    |||||||||| |||||||| |||||||||||||| ||| |||||||||||| ||||||||||| |||| |||||| ||||| || ||| ||||   ||||    
T  45813727 aagtttatcaaatttattcttaggaataacattcattgaaatataaagatgtgaattttattttaaggtatttagaaaaaagatattttgttaagattat 45813628  T
Q  392 aatattcctaggaaccataaaaatat 417  Q
    |||||||| | ||||| ||| |||||    
T  45813627 aatattccaaagaaccttaagaatat 45813602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 279 - 415
Target Start/End: Complemental strand, 31807093 - 31806957
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtt 378  Q
    |||||||| ||||||||| |||| ||||||| ||| |||||| ||| ||||||| |||||||||  |||||||||  |||| |||||| |||||||||||    
T  31807093 gtgtgtttatttcaagttgatcaaatttatttctaagaataatatttcttggaacataaagatgaaaattttattctaaggtatttagaaaaaatatgtt 31806994  T
Q  379 tggttagctttataatattcctaggaaccataaaaat 415  Q
    || ||| | ||||||||||    ||||||||||||||    
T  31806993 tgcttaacattataatatttgcgggaaccataaaaat 31806957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 348 - 422
Target Start/End: Original strand, 1007566 - 1007640
Alignment:
Q  348 tttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||| ||| | |||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||    
T  1007566 tttattccaaagtatttaggaaaaatatgtttgattaactttataatattcttaggaaccataaaaatatggatt 1007640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 277 - 397
Target Start/End: Original strand, 3939225 - 3939345
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatg 376  Q
    |||||||||||||| |||||||||| || ||||  |||||||||||||| |||||||||||| | | ||||||||||| |||  |||||  ||||| |||    
T  3939225 gggtgtgtttgttttaagtttatcaaatatatttttaggaataacattctttggaatataaaaaagtgaattttattttaagatatttaaaaaaaacatg 3939324  T
Q  377 tttggttagctttataatatt 397  Q
    |||| ||| | ||||||||||    
T  3939325 tttgattaacattataatatt 3939345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 276 - 372
Target Start/End: Original strand, 45771815 - 45771911
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaa 372  Q
    ||||||||||||||||||||||| || ||||||||| | ||||||| || ||||||| |||||| || |||||||||| ||||| |||||| |||||    
T  45771815 agggtgtgtttgtttcaagtttaccaaatttattcccatgaataacctttcttggaacataaaggtgagaattttattccaaggtatttagaaaaaa 45771911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 278 - 394
Target Start/End: Complemental strand, 19923810 - 19923694
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    ||||||||||||| ||||| |||| |||||||  ||| ||||||||| ||| ||| ||||||||| ||||||||||  |||  |||||| ||||||||||    
T  19923810 ggtgtgtttgttttaagttcatcaaatttatttttagaaataacatttcttagaacataaagatgagaattttattctaagatatttagaaaaaatatgt 19923711  T
Q  378 ttggttagctttataat 394  Q
    ||| ||| | |||||||    
T  19923710 ttgtttaacattataat 19923694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 273 - 353
Target Start/End: Complemental strand, 52186349 - 52186269
Alignment:
Q  273 ctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatt 353  Q
    |||| ||||| ||||||| ||||||| || |||||||   |||||||||||||||||||||||||||||| ||||||||||    
T  52186349 ctaatggtgtatttgttttaagtttaccaaatttattttaaggaataacattccttggaatataaagatgagaattttatt 52186269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 422
Target Start/End: Original strand, 30240782 - 30240880
Alignment:
Q  322 attccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataaaaatatggat 421  Q
    |||||||| |||||||| |||| ||||||||| |||  | || |  ||||||||||||||||| |||||||||||||||| ||||||||||| || ||||    
T  30240782 attccttgaaatataaaaatggaaattttattccaaatatttaa--aaaaatatgtttggttaactttataatattcctaagaaccataaaagtagggat 30240879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 281 - 326
Target Start/End: Complemental strand, 49824067 - 49824022
Alignment:
Q  281 gtgtttgtttcaagtttatcacatttattcctaggaataacattcc 326  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  49824067 gtgtttgtttcaagtttatcaaatttattcctaggaataacattcc 49824022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 276 - 342
Target Start/End: Complemental strand, 9011511 - 9011445
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatg 342  Q
    ||||||||||||||| |||||||||| |||||||  ||||||||| |||||| |||| |||||||||    
T  9011511 agggtgtgtttgttttaagtttatcaaatttatttttaggaataatattcctcggaacataaagatg 9011445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 276 - 330
Target Start/End: Original strand, 37726805 - 37726859
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttgg 330  Q
    ||||||||||||||||||||| |  | ||||||||||||||||||||||||||||    
T  37726805 agggtgtgtttgtttcaagttcactaaatttattcctaggaataacattccttgg 37726859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 407
Target Start/End: Original strand, 29769272 - 29769366
Alignment:
Q  316 aataacattccttggaatataaagatgggaattttatttcaaggaattt---aggaaaaatatgtttggttagctttataatattcctaggaacc 407  Q
    |||||||||| |||||||||||||||| |||||||||||||||  ||||   || ||||| |||||| |||| | |||||||||| | |||||||    
T  29769272 aataacattctttggaatataaagatgtgaattttatttcaagatatttagaagaaaaaaaatgtttagttaacattataatatttcaaggaacc 29769366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 358
Target Start/End: Original strand, 13521053 - 13521129
Alignment:
Q  282 tgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaag 358  Q
    |||||| || ||||||| || |||||||| ||  ||||||||||  | ||||||||||||| |||||||||||||||    
T  13521053 tgtttgatttaagtttaccaaatttattcttaaaaataacattcactagaatataaagatgtgaattttatttcaag 13521129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 311
Target Start/End: Original strand, 1007539 - 1007573
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcc 311  Q
    ||||||||||||||||||||||||| |||||||||    
T  1007539 gggtgtgtttgtttcaagtttatcaaatttattcc 1007573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 134; Significance: 1e-69; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 277 - 422
Target Start/End: Original strand, 38363804 - 38363949
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatg 376  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38363804 gggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatg 38363903  T
Q  377 tttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  38363904 tttggttagctttataatattcctaggaaccataaaaatagggatt 38363949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 274 - 422
Target Start/End: Complemental strand, 37392897 - 37392749
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  37392897 taagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaat 37392798  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  37392797 atgtttggttagctttataatattcctaggaaccataaaaatagggatt 37392749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 274 - 422
Target Start/End: Complemental strand, 35818775 - 35818627
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  35818775 taagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaat 35818676  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35818675 atgtttggttagctttataatattcctaggaaccataaaaatagggatt 35818627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 278 - 422
Target Start/End: Original strand, 18297836 - 18297980
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18297836 ggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgt 18297935  T
Q  378 ttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||| |||||||||||||||||| |||||    
T  18297936 ttggttagctttataatatttctaggaaccataaaaatagggatt 18297980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 274 - 422
Target Start/End: Complemental strand, 38133089 - 38132941
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  38133089 taagggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaat 38132990  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38132989 atgtttggttagctttataatattcctaggaaccataaaaatagggatt 38132941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 279 - 422
Target Start/End: Original strand, 42755592 - 42755735
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtt 378  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||    
T  42755592 gtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatatgaagatgggaattttattccaaggaatttaggaaaaatatatt 42755691  T
Q  379 tggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  42755692 tggttagctttataatattcctaggaaccataaaaatagggatt 42755735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 273 - 422
Target Start/End: Original strand, 12710364 - 12710513
Alignment:
Q  273 ctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaa 372  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||    
T  12710364 ctaagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagaaatgtaggaaaaa 12710463  T
Q  373 tatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  12710464 tatgtttcgttagctttataatattcctaggaaccataaaaataaggatt 12710513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 274 - 422
Target Start/End: Complemental strand, 16313858 - 16313710
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    |||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  16313858 taagggtgtgtttgtttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaat 16313759  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||    
T  16313758 atgtttggttagctttataatattcctaggaatcataaaaatagggatt 16313710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 274 - 422
Target Start/End: Original strand, 25837631 - 25837779
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||||||||||||||||||||| || |||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25837631 taagggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaat 25837730  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||    
T  25837731 atgtttggttagctttataatattcctatgaaccataaaaatagggatt 25837779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 276 - 422
Target Start/End: Original strand, 7930961 - 7931107
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || ||||||| ||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||    
T  7930961 agggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattctttggaatataaagatgagaattttattccaaggaatttaggaaaaatat 7931060  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  7931061 gtttggttagctttataatattcctaggaaccataaaaatagggatt 7931107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 276 - 422
Target Start/End: Complemental strand, 32661283 - 32661137
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  32661283 agggtgtgtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttatgaaaaatat 32661184  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||    
T  32661183 gtttggttagctttataatattcctaagaaccataaaaatagggatt 32661137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 281 - 422
Target Start/End: Complemental strand, 10896560 - 10896419
Alignment:
Q  281 gtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttg 380  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  10896560 gtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttg 10896461  T
Q  381 gttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||| ||||||||||||||||| |||||    
T  10896460 gttagctttataatattcttaggaaccataaaaatagggatt 10896419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 274 - 422
Target Start/End: Original strand, 26061864 - 26062012
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||||||||||||| ||||||| || ||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||    
T  26061864 taagggtgtgtttgttttaagtttaccaaatttattcctaggaataacattccttgtaatataaagatgagaattttattccaaggaatttaggaaaaat 26061963  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  26061964 atgtttggttaactttataatattcctaggaaccataaaaatagggatt 26062012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 276 - 422
Target Start/End: Original strand, 3049731 - 3049877
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||  ||||||||||| ||||||||    
T  3049731 agggtgtgtttgtttcaagtttatcaaatttattcataggaataacattccttgaaatataaagatgggaattttattcgaaggaatttagaaaaaatat 3049830  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||| |||||||||||||||||||| |||||||||| |||||    
T  3049831 gtttggttatctttataatattcctaggaatcataaaaatagggatt 3049877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 276 - 422
Target Start/End: Complemental strand, 26602286 - 26602140
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || ||||||| |||| |||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||    
T  26602286 agggtgtgtttgtttcaagtttaccaaatttattgctagaaataacattccttgaaacataaagatgggaattttattccaaggaatttaggaaaaatat 26602187  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||    
T  26602186 gtttggttagctttataatattccttggaaccataaaaatagggatt 26602140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 272 - 422
Target Start/End: Complemental strand, 40197406 - 40197256
Alignment:
Q  272 tctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaa 371  Q
    ||||||||| |||||| |||||||||| || |||||||||||||||||| |||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  40197406 tctaagggtttgtttgcttcaagtttaccaaatttattcctaggaataatattctttggaatataaagatgggaattttattctaaggaatttaggaaaa 40197307  T
Q  372 atatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  40197306 atatgtttggttaactttataatattcctaggaaccataaaaatagggatt 40197256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 278 - 422
Target Start/End: Complemental strand, 18726967 - 18726823
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||||  ||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  18726967 ggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattaattggaatataaagatgaaaattttattccaaggaatttaggaaaaatatgt 18726868  T
Q  378 ttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  18726867 ttggttagctttataatattcctaggaaccataaaaatagggatt 18726823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 288 - 422
Target Start/End: Complemental strand, 1554692 - 1554557
Alignment:
Q  288 tttcaagtttatcacatttattcctaggaataacattccttggaatataaa-gatgggaattttatttcaaggaatttaggaaaaatatgtttggttagc 386  Q
    ||||||||||| || |||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||     
T  1554692 tttcaagtttaccaaatttattcttaggaataacattccttggaatataaaagatgggaattttattccaaggaatttaggaaaaatatggttggttagt 1554593  T
Q  387 tttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||| || |||||    
T  1554592 tttataatattcctaggaaccataaaattagggatt 1554557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 279 - 422
Target Start/End: Complemental strand, 5020837 - 5020695
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtt 378  Q
    ||||||||||||||||||||||| |||||||  |||||||||||||| ||||||||||||||||  |||||||||  |||| ||||||||||||||||||    
T  5020837 gtgtgtttgtttcaagtttatcaaatttatttttaggaataacattctttggaatataaagatgataattttattctaaggtatttaggaaaaatatgtt 5020738  T
Q  379 tggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||| |||||||||||| || |||| ||||||||||||||||    
T  5020737 tggttaactttataatatt-ctgggaatcataaaaatatggatt 5020695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 278 - 422
Target Start/End: Complemental strand, 19161088 - 19160943
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttag-gaaaaatatg 376  Q
    |||||||||||||||||||||||| ||||||||  | ||||||||||| |||||||||||||||| ||| ||||||||| || ||||||  |||||||||    
T  19161088 ggtgtgtttgtttcaagtttatcaaatttattctcaagaataacattctttggaatataaagatgagaaatttatttcagggtatttagaaaaaaatatg 19160989  T
Q  377 tttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||| ||||||||||| ||||||||||||||||| |||||    
T  19160988 tttggttagcattataatattcttaggaaccataaaaatagggatt 19160943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 277 - 416
Target Start/End: Complemental strand, 31117874 - 31117732
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaa---at 373  Q
    ||||||||||||||||||||||||| ||||||   |||||||||||||| |||||||||||||||| |||||||||||||| | |||||| ||||   ||    
T  31117874 gggtgtgtttgtttcaagtttatcaaatttatatttaggaataacattcattggaatataaagatgagaattttatttcaaagtatttagaaaaaaatat 31117775  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaata 416  Q
    ||| ||||||| |||||||||||||||||||||||||||||||    
T  31117774 atgcttggttaactttataatattcctaggaaccataaaaata 31117732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 279 - 422
Target Start/End: Complemental strand, 21137476 - 21137334
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtt 378  Q
    ||||||||||||  ||||||||| ||||||| |||| |||||||||  |||||||||||||||| ||||||||||| |||| |||||  |||||||||||    
T  21137476 gtgtgtttgtttttagtttatcaaatttattactag-aataacattttttggaatataaagatgagaattttattttaaggtatttaaaaaaaatatgtt 21137378  T
Q  379 tggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||| ||||||||||||||||||||||||||||||| |||||    
T  21137377 tggttaactttataatattcctaggaaccataaaaatacggatt 21137334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 276 - 422
Target Start/End: Original strand, 15226688 - 15226834
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    |||||| ||||||||||| |||| || |||||||  |||||||||| |||||||||||||||||||| |||||||||||||||| |||||| ||||||||    
T  15226688 agggtgcgtttgtttcaattttaccaaatttattattaggaataactttccttggaatataaagatgagaattttatttcaaggtatttagaaaaaatat 15226787  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||| |||||||| | ||| ||||||| |||||||| |||||    
T  15226788 gtttggttaactttataaaaatccaaggaaccttaaaaatagggatt 15226834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 276 - 415
Target Start/End: Complemental strand, 16219290 - 16219151
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||  |||||||| |||||||||| ||||| |||||| ||||| ||    
T  16219290 agggtgtgtttgttttaagtttatccaatttattcctaggaataacgttccttggaacttaaagatgagaattttattccaaggtatttagaaaaaagat 16219191  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaat 415  Q
    ||||||||| | ||||||||||| | |||||||| |||||    
T  16219190 gtttggttaacattataatattcttgggaaccatgaaaat 16219151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 278 - 416
Target Start/End: Complemental strand, 33444969 - 33444831
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    |||||||||||||||||||||    |||||||| || |||||||||| | |||||||||||||||  ||||||||||||||| |||||| ||||||||||    
T  33444969 ggtgtgtttgtttcaagtttactgaatttattcataagaataacatttcatggaatataaagatgaaaattttatttcaaggtatttagaaaaaatatgt 33444870  T
Q  378 ttggttagctttataatattcctaggaaccataaaaata 416  Q
    ||||||| ||||||||||||||||| || |||| |||||    
T  33444869 ttggttaactttataatattcctagcaatcatacaaata 33444831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 319 - 422
Target Start/End: Original strand, 35394156 - 35394259
Alignment:
Q  319 aacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataaaaatatg 418  Q
    ||||||||||| |||||||||||| |||||||||| ||||| ||||| |||||||||||||||||| |||||||||||||||| |||||||||||||| |    
T  35394156 aacattccttgaaatataaagatgagaattttattccaaggtatttaagaaaaatatgtttggttaactttataatattcctatgaaccataaaaataag 35394255  T
Q  419 gatt 422  Q
    ||||    
T  35394256 gatt 35394259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 276 - 420
Target Start/End: Original strand, 25899381 - 25899523
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    |||||||||||||||||||| || || |||||||  |||||||||||||||||||||||||||||| |||||||||||  |||| |||||| ||||| ||    
T  25899381 agggtgtgtttgtttcaagtgtaacaaatttatttttaggaataacattccttggaatataaagataggaattttattctaaggtatttagaaaaaagat 25899480  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatgga 420  Q
    ||||||||  | |||||  ||||| ||||||| ||||||||||||    
T  25899481 gtttggttgacattata--attccaaggaaccttaaaaatatgga 25899523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 274 - 422
Target Start/End: Complemental strand, 43872316 - 43872168
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||||||||||||||||||||  || ||||||| ||||||||||||||||||| |||||| |||||  ||||||||| ||||| |||||| |||||     
T  43872316 taagggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaaggtatttagaaaaaag 43872217  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||| | ||||||| || | |||||||  ||||||| |||||    
T  43872216 atgtttggttaacattataatgtttcaaggaacctcaaaaatagggatt 43872168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 315 - 416
Target Start/End: Complemental strand, 6805936 - 6805831
Alignment:
Q  315 gaataacattccttggaatataaagatgggaattttatttcaagg----aatttaggaaaaatatgtttggttagctttataatattcctaggaaccata 410  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||     |||||||||||||||||||||||| |||||||||||||| |||||||||     
T  6805936 gaataacattccttgaaatataaagatgggaattttattccaaggtatatatttaggaaaaatatgtttggttaactttataatattcccaggaaccatg 6805837  T
Q  411 aaaata 416  Q
    ||||||    
T  6805836 aaaata 6805831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 273 - 416
Target Start/End: Complemental strand, 33533744 - 33533601
Alignment:
Q  273 ctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaa 372  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||  ||||||| ||||||||||||| |||||||||| ||| | |||||| | |||    
T  33533744 ctaagggtgtgtttgtttcaagtttgtcaaatttattcctaggaatattattcctttgaatataaagatgtgaattttattccaatgtatttagaataaa 33533645  T
Q  373 tatgtttggttagctttataatattcctaggaaccataaaaata 416  Q
     ||||||| ||| | |||| ||||||  | ||||| ||||||||    
T  33533644 gatgtttgattaacattatgatattctcaagaaccttaaaaata 33533601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 348 - 422
Target Start/End: Complemental strand, 41228990 - 41228916
Alignment:
Q  348 tttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  41228990 tttattccaaggaatttaggaaaaatatgtttggttagctttataatattcctagaaaccataaaaatagggatt 41228916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 279 - 416
Target Start/End: Original strand, 41432464 - 41432603
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaa--atatg 376  Q
    |||||||||||| |||||||||| |||||||  ||||||||||||| |||| || |||||||||| ||||||||| ||||| |||||  ||||  |||||    
T  41432464 gtgtgtttgttttaagtttatcaaatttatttttaggaataacatttcttgaaacataaagatggaaattttattccaaggcatttaaaaaaaatatatg 41432563  T
Q  377 tttggttagctttataatattcctaggaaccataaaaata 416  Q
    |||| ||| | ||||||||||| | ||| |||||||||||    
T  41432564 tttgcttaacattataatattcttgggagccataaaaata 41432603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 333 - 422
Target Start/End: Original strand, 7317156 - 7317244
Alignment:
Q  333 tataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||| ||||||||||  |||| |||||||||||||||||||||||| |||||||||||||||| ||||||| |||||| |||||    
T  7317156 tataaagatgtgaattttattctaaggtatttaggaaaaatatgtttggttaactttataatattccta-gaaccatgaaaatagggatt 7317244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 422
Target Start/End: Complemental strand, 29421839 - 29421691
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaa-tataaagatgggaatt---ttatttcaaggaatttaggaaaaa 372  Q
    |||||||||||||| || ||||  | ||||||||||| ||||||||||  |||||| ||||||||||  ||||   |||||  |||| |||||| |||||    
T  29421839 gggtgtgtttgttttaa-tttacgaaatttattcctatgaataacattatttggaaatataaagatgaaaattgttttattctaaggtatttagaaaaaa 29421741  T
Q  373 tatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||| |||| ||| ||||||||||||||||||||||||||||||| |||||    
T  29421740 tatatttgattaactttataatattcctaggaaccataaaaatagggatt 29421691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 398
Target Start/End: Original strand, 34672083 - 34672207
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatat--aaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||||||||||| |||||||||| |||||||  ||| ||||||| |||||| |||||  |||||||| ||||||||   ||||  ||||| ||||||    
T  34672083 agggtgtgtttgttttaagtttatcaaatttatttttagaaataacagtccttgaaatataaaaagatggaaattttatactaaggtttttagaaaaaat 34672182  T
Q  374 atgtttggttagctttataatattc 398  Q
    || |||||||| |||||||||||||    
T  34672183 atttttggttaactttataatattc 34672207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 278 - 422
Target Start/End: Complemental strand, 37982134 - 37981988
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaa-ttttatttcaaggaattt--aggaaaaata 374  Q
    ||||||||||||||||||||| || |||||||  ||||||||||||||||| ||| ||||||||| ||| ||||||| ||||| ||||  |  ||||| |    
T  37982134 ggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattcctt-gaacataaagatgagaatttttattccaaggtatttaaaaaaaaaaga 37982036  T
Q  375 tgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||| ||| | ||||||||||  | ||||||||||||||| |||||    
T  37982035 tgtttgcttaacattataatatttatgggaaccataaaaatagggatt 37981988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 335
Target Start/End: Original strand, 35394078 - 35394139
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatat 335  Q
    |||||||||||||||||||||||||||| |||||||| ||| |||||||||| |||||||||    
T  35394078 taagggtgtgtttgtttcaagtttatcaaatttattcttagtaataacattctttggaatat 35394139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 278 - 357
Target Start/End: Original strand, 12649859 - 12649938
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaa 357  Q
    ||||||||||||||||||||| || ||||||| ||| |||||||| |||||| |||| || |||| ||||||||||||||    
T  12649859 ggtgtgtttgtttcaagtttaccaaatttatttctacgaataacaatccttgtaatacaatgatgtgaattttatttcaa 12649938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 278 - 353
Target Start/End: Original strand, 37124073 - 37124148
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatt 353  Q
    ||||||||| ||| |||||||||| |||||||  ||  ||||||| |  |||||||||||||||| ||||||||||    
T  37124073 ggtgtgtttattttaagtttatcaaatttattgttaaaaataacaatatttggaatataaagatgagaattttatt 37124148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 318
Target Start/End: Complemental strand, 41229017 - 41228976
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcctaggaat 318  Q
    |||||||||||||||||||||| || ||||||||| ||||||    
T  41229017 gggtgtgtttgtttcaagtttaccaaatttattccaaggaat 41228976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 133; Significance: 5e-69; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 274 - 422
Target Start/End: Complemental strand, 41859397 - 41859249
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41859397 taagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttatttcaaggaatttaggaaaaat 41859298  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41859297 atgtttggttagctttataatattcctaggaaccataaaaatagggatt 41859249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 276 - 422
Target Start/End: Complemental strand, 13230338 - 13230192
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  13230338 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatat 13230239  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  13230238 gtttggttagctttataatattcctaggaaccataaaaatagggatt 13230192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 278 - 422
Target Start/End: Complemental strand, 27763246 - 27763102
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  27763246 ggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagataggaattttattccaaggaatttaggaaaaatatgt 27763147  T
Q  378 ttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  27763146 ttggttagctttataatattcctaggaaccataaaaatagggatt 27763102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 274 - 422
Target Start/End: Original strand, 45595992 - 45596140
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  45595992 taagggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaat 45596091  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  45596092 atgtttggttagctttataatattcctaggaaccataaaaatagggatt 45596140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 273 - 422
Target Start/End: Original strand, 47670085 - 47670234
Alignment:
Q  273 ctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaa 372  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  47670085 ctaagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaa 47670184  T
Q  373 tatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||| |||||||| ||||||||||||||||||||||||||||||| |||||    
T  47670185 tatatttggttatctttataatattcctaggaaccataaaaatagggatt 47670234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 273 - 422
Target Start/End: Complemental strand, 55968352 - 55968203
Alignment:
Q  273 ctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaa 372  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  55968352 ctaagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttagaaaaaa 55968253  T
Q  373 tatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  55968252 tatgtttggttaactttataatattcctaggaaccataaaaatagggatt 55968203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 274 - 422
Target Start/End: Original strand, 43722988 - 43723136
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  43722988 taagggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaaagaatttaggaaaaat 43723087  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  43723088 atgtttggttagctttataatattcctaggaaccataaaaatagggatt 43723136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 276 - 416
Target Start/End: Complemental strand, 45748144 - 45748004
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  45748144 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttagaaaaaatat 45748045  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaata 416  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  45748044 gtttggttagctttataatattcctaggaaccataaaaata 45748004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 276 - 422
Target Start/End: Complemental strand, 39730642 - 39730496
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  39730642 agggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatat 39730543  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||| |||||||||||||||||||||||| |||||| |||||    
T  39730542 gtttggttaactttataatattcctaggaaccatgaaaatagggatt 39730496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 276 - 422
Target Start/End: Original strand, 48873747 - 48873893
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  48873747 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaatattattccaaggaatgtaggaaaaatat 48873846  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  48873847 gtttggttagctttataatattcctaggaaccataaaaatagggatt 48873893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 276 - 422
Target Start/End: Original strand, 48879051 - 48879197
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  48879051 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaatattattccaaggaatgtaggaaaaatat 48879150  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  48879151 gtttggttagctttataatattcctaggaaccataaaaatagggatt 48879197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 273 - 422
Target Start/End: Original strand, 42773671 - 42773820
Alignment:
Q  273 ctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaa 372  Q
    ||||||| |||||||||||||||||| || |||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  42773671 ctaagggcgtgtttgtttcaagtttaccaaatttattcctagaaataacattccttggagtataaagatgggaattttattccaaggaatttaggaaaaa 42773770  T
Q  373 tatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42773771 tatgtttggttagctttataatattcctaggaaccataaaaatagggatt 42773820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 274 - 422
Target Start/End: Original strand, 25932165 - 25932313
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||||||||||||||||||||  || ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  25932165 taagggtgtgtttgtttcaagtttcccaaatttattcctaggaataacattccttgaaatataaagatgggaattttattccaaggaatttaggaaaaat 25932264  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  25932265 atgtttggttaactttataatattcctaggaaccataaaaatagggatt 25932313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 274 - 422
Target Start/End: Original strand, 27555151 - 27555298
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    |||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27555151 taagggtgtgtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaat 27555250  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||    
T  27555251 atgtttggttagctttat-atattcctaggaaccataaaaatagggatt 27555298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 276 - 418
Target Start/End: Original strand, 23686513 - 23686655
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || |||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  23686513 agggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttgaaatataaagatgggaattttattccaaggaatttaggaaaaatat 23686612  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatg 418  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  23686613 gtttggttagttttataatattcctaggaaccataaaaatatg 23686655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 276 - 422
Target Start/End: Original strand, 35999412 - 35999558
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||| ||||||||||||||||| || |||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  35999412 agggtttgtttgtttcaagtttaccaaatttattcttaagaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatat 35999511  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  35999512 gtttggttagctttataatattcctaggaaccataaaaatagggatt 35999558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 283 - 416
Target Start/End: Complemental strand, 48519233 - 48519100
Alignment:
Q  283 gtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggt 382  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  48519233 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgtgaattttattccaaggaatttaggaaaaatatgtttggt 48519134  T
Q  383 tagctttataatattcctaggaaccataaaaata 416  Q
    ||||||||||||||||||||||||||||||||||    
T  48519133 tagctttataatattcctaggaaccataaaaata 48519100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 274 - 422
Target Start/End: Complemental strand, 18405584 - 18405436
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||| |||||||||   |||||||||||||||||    
T  18405584 taagggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatggaaattttattctcaggaatttaggaaaaat 18405485  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18405484 atgtttggttagctttataatattcctaggaaccataaaaatagggatt 18405436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 278 - 422
Target Start/End: Complemental strand, 41744568 - 41744424
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  41744568 ggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattcattggaatataaagatgagaattttattccaaggaatttaggaaaaatatgt 41744469  T
Q  378 ttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  41744468 ttggttagctttataatattcctaggaaccataaaaatagggatt 41744424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 278 - 416
Target Start/End: Original strand, 40435628 - 40435766
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    ||||||||||||||||||||| || |||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  40435628 ggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgt 40435727  T
Q  378 ttggttagctttataatattcctaggaaccataaaaata 416  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  40435728 ttggttaactttataatattcctaggaaccataaaaata 40435766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 284 - 413
Target Start/End: Complemental strand, 50673245 - 50673116
Alignment:
Q  284 tttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggtt 383  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  50673245 tttgtttcaagtttatcaaatttattcctaggaataacattccttgaaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttggtt 50673146  T
Q  384 agctttataatattcctaggaaccataaaa 413  Q
    ||||||||||||||||||||||||||||||    
T  50673145 agctttataatattcctaggaaccataaaa 50673116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 272 - 422
Target Start/End: Original strand, 935848 - 935998
Alignment:
Q  272 tctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaa 371  Q
    ||||||||||||||||||||||||||| || |||||||| || |||||||||| |||||||||||||||| ||||||||||| ||| |||||||||||||    
T  935848 tctaagggtgtgtttgtttcaagtttaccaaatttattcttaagaataacatttcttggaatataaagataggaattttattccaaagaatttaggaaaa 935947  T
Q  372 atatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  935948 atatgtttggttagctttataatattcctaggaactataaaaatagggatt 935998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 276 - 422
Target Start/End: Original strand, 8321971 - 8322117
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || |||||||  |||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||    
T  8321971 agggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattctttggaatataaagatgagaattttattacaaggaatttaggaaaaatat 8322070  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||    
T  8322071 gtttggttagctttataatattcataggaaccataaaaatagggatt 8322117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 276 - 422
Target Start/End: Complemental strand, 39835656 - 39835510
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  39835656 agggtgtgtttgtttcaagtttaccaaatttatttctatgaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatat 39835557  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||| ||||||||||||||||| || |||||||||| |||||    
T  39835556 gtttggttaactttataatattcctagaaatcataaaaataaggatt 39835510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 277 - 422
Target Start/End: Complemental strand, 31938217 - 31938072
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatg 376  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||  ||||||||| ||||| ||||||||||||||||    
T  31938217 gggtgtgtttgtttcaagtttatcaaatttattcataggaataacattccttggaatttaaagatgaaaattttattccaaggtatttaggaaaaatatg 31938118  T
Q  377 tttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||    
T  31938117 tttggttaactttataatattcctaggaaccataaaaataaggatt 31938072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 278 - 422
Target Start/End: Original strand, 27942465 - 27942609
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||  | |||||||||| ||| ||||||||||||||||||||||| ||||||||||    
T  27942465 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacatttttaggaatataaatatgagaattttatttcaaggaatttagaaaaaatatgt 27942564  T
Q  378 ttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  27942565 ttggttagctttataatattcctaggaaccataaaaataaggatt 27942609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 276 - 422
Target Start/End: Complemental strand, 6280270 - 6280124
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||| || ||||||||||| ||||||||||| |||||||||    
T  6280270 agggtgtgtttgtttcaagtttaccaaatttattcataggaataacattccttggaatataaaaataggaattttattccaaggaatttatgaaaaatat 6280171  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
     |||||||| ||||||||||||||||||||||||||||||| |||||    
T  6280170 atttggttaactttataatattcctaggaaccataaaaatagggatt 6280124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 284 - 422
Target Start/End: Complemental strand, 34238295 - 34238157
Alignment:
Q  284 tttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggtt 383  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||    
T  34238295 tttgtttcaagtttatcaaatttattcataggaataacattccttggaatataaagatgagaattttattccaaggaatttaagaaaaatatgtttggtt 34238196  T
Q  384 agctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||| | ||||||| |||||    
T  34238195 agctttataatattcctaggaacaaaaaaaatagggatt 34238157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 279 - 422
Target Start/End: Original strand, 18931482 - 18931625
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtt 378  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||| | ||||||||| ||||||||||| ||||||||||||    
T  18931482 gtgtgtttgttttaagtttatcaaatttattcttaggaataacattccttggaatataaagatagaaattttattccaaggaatttaagaaaaatatgtt 18931581  T
Q  379 tggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||| |||| ||||||||| |||||    
T  18931582 tggttagctttataatattcctatgaactataaaaatagggatt 18931625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 276 - 422
Target Start/End: Original strand, 32953249 - 32953395
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||| |||||||||||||||||||  ||||||| |||| ||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  32953249 agggtatgtttgtttcaagtttatctaatttatttctagaaataatattcattggaatataaagatgggaattttattccaaggaatttaggaaaaatat 32953348  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||| | |||||||||||||||| |||||    
T  32953349 gtttggttagctttataatatttcaaggaaccataaaaatagggatt 32953395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 318 - 422
Target Start/End: Complemental strand, 34049904 - 34049800
Alignment:
Q  318 taacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataaaaatat 417  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||     
T  34049904 taacattccttggaatataaagatgggaattttattccaaggaatttagaaaaaatatgtttggttagctttataatattccaaggaaccataaaaatag 34049805  T
Q  418 ggatt 422  Q
    |||||    
T  34049804 ggatt 34049800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 315 - 422
Target Start/End: Original strand, 39498590 - 39498697
Alignment:
Q  315 gaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataaaaa 414  Q
    |||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  39498590 gaataacattccttggaatataaagatgagaattttattctaaggaatttaggaaaaatatatttggttagctttataatattcctaggaaccataaaaa 39498689  T
Q  415 tatggatt 422  Q
    || |||||    
T  39498690 tagggatt 39498697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 315 - 422
Target Start/End: Original strand, 39501929 - 39502036
Alignment:
Q  315 gaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataaaaa 414  Q
    |||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  39501929 gaataacattccttggaatataaagatgagaattttattctaaggaatttaggaaaaatatatttggttagctttataatattcctaggaaccataaaaa 39502028  T
Q  415 tatggatt 422  Q
    || |||||    
T  39502029 tagggatt 39502036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 277 - 415
Target Start/End: Original strand, 7258691 - 7258829
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatg 376  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||||||||| ||||| ||||    |||| |||    
T  7258691 gggtgtgtttgtttcaagtttatcaaatttattctcaggaataacattccttggaatataaatatgggaattttattccaaggtatttgaataaaagatg 7258790  T
Q  377 tttggttagctttataatattcctaggaaccataaaaat 415  Q
    |||||||| | || ||||||||| |||||||||||||||    
T  7258791 tttggttaacattttaatattccaaggaaccataaaaat 7258829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 277 - 422
Target Start/End: Original strand, 36858135 - 36858279
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatg 376  Q
    ||||||| ||||| ||||||||| | |||||||| || ||||||||||||||| |||| | |||||||||||| ||| ||||| ||||| ||||||||||    
T  36858135 gggtgtgcttgttacaagtttataaaatttattcttaagaataacattccttgtaatacacagatgggaatttcatt-caaggtatttaagaaaaatatg 36858233  T
Q  377 tttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||| || |||| |||||||||||||||||||||||||| |||||    
T  36858234 tttggataactttgtaatattcctaggaaccataaaaataaggatt 36858279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 276 - 422
Target Start/End: Original strand, 51968505 - 51968651
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||| | |  |||||||| |||||||||| ||||| || ||| ||||| ||    
T  51968505 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttcgtacgtaaagatgagaattttattccaaggtatatagaaaaaagat 51968604  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||| ||| | |||||||||| ||  |||||||||||||| |||||    
T  51968605 gtttgtttaacattataatatttctgagaaccataaaaataaggatt 51968651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 277 - 416
Target Start/End: Original strand, 30790275 - 30790413
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatg 376  Q
    |||||||||||||||||||||| || ||||||| |||||| |||||||| |||||||||||||||| ||| |||||| ||| | |||||  ||||| |||    
T  30790275 gggtgtgtttgtttcaagtttagcaaatttatttctaggagtaacattc-ttggaatataaagatgagaaatttattccaaagtatttaaaaaaaagatg 30790373  T
Q  377 tttggttagctttataatattcctaggaaccataaaaata 416  Q
    |||||||| | |||||||||||| ||||||| ||||||||    
T  30790374 tttggttaacattataatattccaaggaaccttaaaaata 30790413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 280 - 412
Target Start/End: Original strand, 52469427 - 52469561
Alignment:
Q  280 tgtgtttgtttcaagtttatcacatttattcctaggaataacattcc-ttggaatataaagatgggaattttatttcaaggaatttag-gaaaaatatgt 377  Q
    ||||||||||| ||||| |||| |||||||| ||||||||||||||| ||||||||||||||| | ||||||||  |||   ||||||  ||||| ||||    
T  52469427 tgtgtttgttttaagttaatcaaatttattcttaggaataacattcctttggaatataaagattgaaattttataccaaaatatttagaaaaaaacatgt 52469526  T
Q  378 ttggttagctttataatattcctaggaaccataaa 412  Q
    |||||||||||||||||||||||| ||||||||||    
T  52469527 ttggttagctttataatattcctatgaaccataaa 52469561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 276 - 389
Target Start/End: Original strand, 38413902 - 38414015
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    |||| |||||||||||||||||| || ||||| |  ||| ||||||||||||||||||||||||||| |||||| ||| ||||| |||||| ||||||||    
T  38413902 agggcgtgtttgtttcaagtttaccaaatttaattttagaaataacattccttggaatataaagatgagaatttaattccaaggtatttagaaaaaatat 38414001  T
Q  376 gtttggttagcttt 389  Q
    ||||||||| ||||    
T  38414002 gtttggttaacttt 38414015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 279 - 422
Target Start/End: Complemental strand, 10401126 - 10400984
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtt 378  Q
    |||||||||||| ||||||| || ||||||| || | |||||||||| ||| | |||||| ||| |||||||||| ||||  || ||| ||||| |||||    
T  10401126 gtgtgtttgttttaagtttaccaaatttatttctggaaataacattctttgaagtataaaaatgagaattttattccaagatatatagaaaaaacatgtt 10401027  T
Q  379 tggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||| |||||||||||||| ||||||||||||||| |||||    
T  10401026 tggttag-tttataatattcctcggaaccataaaaataaggatt 10400984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 277 - 353
Target Start/End: Complemental strand, 36860104 - 36860028
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatt 353  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  36860104 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaacataaaaatggaaattttatt 36860028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 277 - 416
Target Start/End: Original strand, 38394634 - 38394773
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatg 376  Q
    |||||||||||||||||||||| || ||||||| ||| || ||| ||| ||| ||| ||||| ||| |||||||||||||||| |||||| ||||| |||    
T  38394634 gggtgtgtttgtttcaagtttaccaaatttatttctaagactaatatttcttagaacataaatatgagaattttatttcaaggtatttagaaaaaagatg 38394733  T
Q  377 tttggttagctttataatattcctaggaaccataaaaata 416  Q
    |||| |||   ||||||||||  | |||||||||||||||    
T  38394734 tttgcttaatattataatatttttgggaaccataaaaata 38394773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 272 - 372
Target Start/End: Original strand, 18405125 - 18405224
Alignment:
Q  272 tctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaa 371  Q
    ||||||||||||||||||| ||||||  || |||||||| |||||||||||||||||| |||||||||||||||| | |||| ||||| |||||| ||||    
T  18405125 tctaagggtgtgtttgttttaagtttgccaaatttattcttaggaataacattccttgaaatataaagatgggaa-tgtattccaaggtatttagaaaaa 18405223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 282 - 384
Target Start/End: Original strand, 52413959 - 52414061
Alignment:
Q  282 tgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttgg 381  Q
    |||||| ||||| |||| || |||||||| ||| |||||||  |||||||||||||||||| |||||||||||||||  | |||| ||||||||||||||    
T  52413959 tgtttgcttcaaatttaccaaatttattcttagaaataacaacccttggaatataaagatgtgaattttatttcaagcgaattagaaaaaatatgtttgg 52414058  T
Q  382 tta 384  Q
    |||    
T  52414059 tta 52414061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 37014724 - 37014611
Alignment:
Q  284 tttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggtt 383  Q
    |||||||||||||||  | ||||||||||| |||||| |||  |||||||||||||||| ||||||||||  |||  |||||| ||||| ||||||||||    
T  37014724 tttgtttcaagtttacaaaatttattcctaagaataatattttttggaatataaagatgcgaattttattcgaagatatttagaaaaaagatgtttggtt 37014625  T
Q  384 agctttataatatt 397  Q
    | | ||||||||||    
T  37014624 aacattataatatt 37014611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 363 - 422
Target Start/End: Complemental strand, 25916295 - 25916236
Alignment:
Q  363 ttaggaaaaatatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  25916295 ttagaaaaaatatgtttgattagctttataatattcctaggaaccataaaaatagggatt 25916236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 319 - 412
Target Start/End: Complemental strand, 24805397 - 24805304
Alignment:
Q  319 aacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataaa 412  Q
    |||||||||||||| ||||||||| |||||||| || |||| |||||| ||||| ||||||| ||| | |||||||||| || |||||||||||    
T  24805397 aacattccttggaacataaagatgtgaattttactttaaggtatttagaaaaaagatgtttgcttaacattataatattactgggaaccataaa 24805304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 276 - 335
Target Start/End: Complemental strand, 25916362 - 25916302
Alignment:
Q  276 agggtgtgtttgtttc-aagtttatcacatttattcctaggaataacattccttggaatat 335  Q
    |||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||    
T  25916362 agggtgtgtttgtttctaagtttaccaaatttattcctaggaataacattccttggaatat 25916302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 407
Target Start/End: Complemental strand, 47426520 - 47426452
Alignment:
Q  339 gatgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaacc 407  Q
    |||||||||||||||  |||| |||||| |||||||| |||||||| ||||||||||||||||||||||    
T  47426520 gatgggaattttattcaaaggtatttagaaaaaatatatttggttaactttataatattcctaggaacc 47426452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 282 - 416
Target Start/End: Original strand, 14796295 - 14796429
Alignment:
Q  282 tgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttgg 381  Q
    ||||| ||| |||||| ||| |||||||  ||||||||| |||  || ||||||||||||| ||||||||||| || | |||||| ||||| |||||||     
T  14796295 tgtttattttaagtttgtcaaatttatttttaggaataatattttttagaatataaagatgtgaattttattttaaagtatttagaaaaaagatgtttgt 14796394  T
Q  382 ttagctttataatattcctaggaaccataaaaata 416  Q
    ||| | |||| |||||  |||||||| ||||||||    
T  14796395 ttaacattatgatatttttaggaaccttaaaaata 14796429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 398
Target Start/End: Complemental strand, 12276260 - 12276137
Alignment:
Q  275 aagggtgtg-tttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||||| |||||||||||||||  | |||||||  |||||||||||||  ||| |||||||||||| ||||||||||||||   |||||| ||  ||    
T  12276260 aagggtgtgatttgtttcaagtttactaaatttatttataggaataacattttttg-aatataaagatgtgaattttatttcaaaatatttagaaagcat 12276162  T
Q  374 atgtttggttagctttataatattc 398  Q
    ||||| ||||| | ||| |||||||    
T  12276161 atgttcggttaacattaaaatattc 12276137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 398
Target Start/End: Original strand, 44309497 - 44309609
Alignment:
Q  286 tgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttag 385  Q
    ||||| |||||||  | |||||||  || |||||| ||| ||| ||| ||||||||| |||||| ||||||| |  |||||||||||||||| ||||||     
T  44309497 tgtttgaagtttactaaatttatttttaagaataatatttcttagaacataaagatgagaatttaatttcaaagtgtttaggaaaaatatgtatggttaa 44309596  T
Q  386 ctttataatattc 398  Q
    | |||||||||||    
T  44309597 cattataatattc 44309609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 361
Target Start/End: Original strand, 37296473 - 37296520
Alignment:
Q  314 ggaataacattccttggaatataaagatgggaattttatttcaaggaa 361  Q
    ||||||||||||||||||||||||| ||| |||||||||| |||||||    
T  37296473 ggaataacattccttggaatataaatatgtgaattttattccaaggaa 37296520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 384
Target Start/End: Original strand, 54478366 - 54478437
Alignment:
Q  313 aggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggtta 384  Q
    ||||||| |||| |||| |||||||| ||| ||||||||||  |||| |||||| ||||| |||||||||||    
T  54478366 aggaatagcatttcttgaaatataaatatgtgaattttattctaaggtatttagaaaaaagatgtttggtta 54478437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 416
Target Start/End: Original strand, 48059808 - 48059922
Alignment:
Q  303 atttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttag-gaaaaatatgtttggttagctttataatattccta 401  Q
    |||||||| || |||||| |||  || |||||||| |||| |||||||||||| | | ||||||  ||||||||||||  |||  ||||||||||| |||    
T  48059808 atttattcttacgaataatattttttagaatataatgatgagaattttatttcgatgtatttagaaaaaaatatgtttaattaattttataatatttcta 48059907  T
Q  402 ggaaccataaaaata 416  Q
    ||||  |||||||||    
T  48059908 ggaattataaaaata 48059922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 8e-68; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 276 - 422
Target Start/End: Complemental strand, 346694 - 346548
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  346694 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatat 346595  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  346594 gtttggttagctttataatattcctaggaaccataaaaatagggatt 346548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 276 - 422
Target Start/End: Original strand, 6171513 - 6171659
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6171513 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatat 6171612  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  6171613 gtttggttagctttataatattcctaggaaccataaaaatagggatt 6171659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 276 - 422
Target Start/End: Complemental strand, 14777847 - 14777701
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14777847 agggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatat 14777748  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||    
T  14777747 gtttggttagctttataatattcctaggaactataaaaatagggatt 14777701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 272 - 422
Target Start/End: Original strand, 4559277 - 4559427
Alignment:
Q  272 tctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaa 371  Q
    ||||||||||||||||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  4559277 tctaagggtgtgtttgtttcaagtttaccaaatttatttctaagaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaa 4559376  T
Q  372 atatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4559377 atatgtttggttagctttataatattcctaggaaccataaaaatagggatt 4559427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 273 - 422
Target Start/End: Original strand, 37192241 - 37192390
Alignment:
Q  273 ctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaa 372  Q
    |||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  37192241 ctaagggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaa 37192340  T
Q  373 tatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  37192341 tatgtttggttagctttataatattcctaggaaccataaaaatagggatt 37192390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 278 - 422
Target Start/End: Original strand, 17965707 - 17965851
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17965707 ggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgt 17965806  T
Q  378 ttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  17965807 ttggttagctttataatattcctaggaaccataaaaatagggatt 17965851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 274 - 422
Target Start/End: Complemental strand, 42675012 - 42674864
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  42675012 taagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacatttcttggaatataaagataggaattttattccaaggaatttaggaaaaat 42674913  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42674912 atgtttggttagctttataatattcctaggaaccataaaaatagggatt 42674864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 274 - 416
Target Start/End: Original strand, 2050586 - 2050728
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    |||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2050586 taagggtgtgtttgtttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaat 2050685  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaata 416  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  2050686 atgtttggttagctttataatattcctaggaatcataaaaata 2050728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 276 - 422
Target Start/End: Original strand, 11071327 - 11071473
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || |||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  11071327 agggtgtgtttgtttcaagtttaccaaatttattcataggaataacattccttgaaatataaagatgggaattttattccaaggaatttaggaaaaatat 11071426  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  11071427 gtttggttaactttataatattcctaggaaccataaaaatatggatt 11071473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 276 - 422
Target Start/End: Complemental strand, 41729479 - 41729333
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41729479 agggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatat 41729380  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||    
T  41729379 gtttggttagctttataatattcctagtaaccataaaaatagggatt 41729333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 277 - 422
Target Start/End: Complemental strand, 5770458 - 5770313
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatg 376  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  5770458 gggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagataggaattttattccaaggaatttaagaaaaatatg 5770359  T
Q  377 tttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||    
T  5770358 tttggttagctttataatattcctagcaaccataaaaatagggatt 5770313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 278 - 422
Target Start/End: Original strand, 638318 - 638462
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    |||||||||| || ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  638318 ggtgtgtttgatttaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaagaaaaatatgt 638417  T
Q  378 ttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  638418 ttggttagctttataatattcctaggaaccataaaaatagggatt 638462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 274 - 422
Target Start/End: Complemental strand, 21737759 - 21737611
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||| ||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||    
T  21737759 taaggatgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaatatgggaattttattccaaggaatttatgaaaaat 21737660  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21737659 atgtttggttagctttataatattcctaggaaccataaaaatagggatt 21737611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 279 - 422
Target Start/End: Original strand, 13760692 - 13760835
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtt 378  Q
    |||||||||||||||||||  || ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  13760692 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaaggaatttagaaaaaatatgtt 13760791  T
Q  379 tggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  13760792 tggttagctttataatattcctaggaaccataaaaatagggatt 13760835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 279 - 422
Target Start/End: Original strand, 37233155 - 37233298
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtt 378  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  37233155 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggtatttaggaaaaatatgtt 37233254  T
Q  379 tggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||| |||||||||||||||||||||||| |||||| |||||    
T  37233255 tggttaactttataatattcctaggaaccatgaaaataaggatt 37233298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 281 - 422
Target Start/End: Complemental strand, 9734190 - 9734049
Alignment:
Q  281 gtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttg 380  Q
    |||||||||| ||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9734190 gtgtttgttttaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttg 9734091  T
Q  381 gttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||| |||||||||||||||||||||||||||||||| |||||    
T  9734090 gttggctttataatattcctaggaaccataaaaatagggatt 9734049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 276 - 416
Target Start/End: Original strand, 23943885 - 23944025
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||| ||||||||    
T  23943885 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattgtaaagaatttagaaaaaatat 23943984  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaata 416  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  23943985 gtttggttacctttataatattcctaggaaccataaaaata 23944025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 279 - 422
Target Start/End: Complemental strand, 28312042 - 28311899
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtt 378  Q
    |||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  28312042 gtgtgtttgtttcaagtttaccaaatttattcataggaataacattccttggaatataaagatgggaattttattccaaggtatttaggaaaaatatgtt 28311943  T
Q  379 tggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||| |||||||||||||||||||||||| |||||| |||||    
T  28311942 tggttaactttataatattcctaggaaccatgaaaatagggatt 28311899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 280 - 422
Target Start/End: Original strand, 26309993 - 26310135
Alignment:
Q  280 tgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgttt 379  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||    
T  26309993 tgtgtttgtttcaagtttaccaaatttattcctaggaatagcattccttggaatataaagatgggaattttattacaagaaatttaggaaaaatatggtt 26310092  T
Q  380 ggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||| ||||||||||||||||| |||||    
T  26310093 ggttagctttataatattcttaggaaccataaaaatagggatt 26310135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 276 - 422
Target Start/End: Complemental strand, 40951208 - 40951062
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||| |||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||| ||| |||||||||||||||||    
T  40951208 agggtatgtttgtttcaaatttaccaaatttattcctaggaataacattccttggaatataaagatgaaaattttattccaaagaatttaggaaaaatat 40951109  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||    
T  40951108 gtttggttagctttataatattcctaagaaccataaaaatagggatt 40951062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 277 - 416
Target Start/End: Complemental strand, 20426830 - 20426691
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatg 376  Q
    |||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||    
T  20426830 gggtgtgtttgtttaaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatttcaatgtatttagaaaaaatatg 20426731  T
Q  377 tttggttagctttataatattcctaggaaccataaaaata 416  Q
    |||||||| ||||||||||||||||  |||||||||||||    
T  20426730 tttggttaactttataatattcctaccaaccataaaaata 20426691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 271 - 422
Target Start/End: Original strand, 37533670 - 37533820
Alignment:
Q  271 atctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaa 370  Q
    |||| |||||||||||||||||||||||  | ||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  37533670 atcttagggtgtgtttgtttcaagtttactaaatttatttctaggaataacattccttggaataaaaagatgggaattttattccaaggaatttaggaaa 37533769  T
Q  371 aatatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    | ||||||||||||||||||| |||||||| ||||||||||||||| |||||    
T  37533770 attatgtttggttagctttat-atattcctgggaaccataaaaatagggatt 37533820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 303 - 422
Target Start/End: Original strand, 41750278 - 41750397
Alignment:
Q  303 atttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctag 402  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  41750278 atttattcctaggaataacattccttgaaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttaactttataatattcctaa 41750377  T
Q  403 gaaccataaaaatatggatt 422  Q
    |||||||||||||| |||||    
T  41750378 gaaccataaaaatagggatt 41750397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 313 - 422
Target Start/End: Original strand, 2521434 - 2521543
Alignment:
Q  313 aggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataaa 412  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2521434 aggaataacattccttggaatataaagatggaaattttattccaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataaa 2521533  T
Q  413 aatatggatt 422  Q
    |||| |||||    
T  2521534 aatagggatt 2521543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 279 - 422
Target Start/End: Original strand, 3902182 - 3902325
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtt 378  Q
    |||||||||||||||||||| || |||||||  |||||||||||||||||| ||||||||||||||||||||||| ||||  |||||| |||||||||||    
T  3902182 gtgtgtttgtttcaagtttaccatatttatttttaggaataacattccttgaaatataaagatgggaattttattccaagatatttagaaaaaatatgtt 3902281  T
Q  379 tggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||| |||||||||||||  |||||||||||||||| |||||    
T  3902282 tggttaactttataatattcacaggaaccataaaaatagggatt 3902325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 284 - 422
Target Start/End: Complemental strand, 27358303 - 27358165
Alignment:
Q  284 tttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggtt 383  Q
    ||||||| ||||||| || ||||||||||||||||||||||  |||||||||||||||| |||||||||||||||| |||||| ||||||||||||| ||    
T  27358303 tttgttttaagtttaccaaatttattcctaggaataacatttattggaatataaagatgagaattttatttcaaggtatttagcaaaaatatgtttgatt 27358204  T
Q  384 agctttataatattcctaggaaccataaaaatatggatt 422  Q
    |  |||||||||||||||||||||||||||||| |||||    
T  27358203 aaatttataatattcctaggaaccataaaaataaggatt 27358165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 276 - 416
Target Start/End: Complemental strand, 18714005 - 18713865
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    |||||||||||| |||||| ||| || |||||||  ||||||||||||||||||||||||||||||| |||| ||||| ||||  |||||| ||||||||    
T  18714005 agggtgtgtttgattcaagcttaccaaatttatttataggaataacattccttggaatataaagatgagaatattattccaagatatttagaaaaaatat 18713906  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaata 416  Q
    ||||||||| |||||||||||||||| ||||||||||||||    
T  18713905 gtttggttaactttataatattcctatgaaccataaaaata 18713865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 278 - 422
Target Start/End: Original strand, 39819414 - 39819558
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    |||||||||||||||| |||| || |||||||| |||||||||||||| ||||||||||||||||| ||||||||| | ||| |||||| ||||||||||    
T  39819414 ggtgtgtttgtttcaaatttaccaaatttattcataggaataacattctttggaatataaagatggaaattttattcccaggtatttagaaaaaatatgt 39819513  T
Q  378 ttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||  |||||||||||||| ||||||| |||||||| |||||    
T  39819514 ttggttgactttataatattccaaggaaccttaaaaataaggatt 39819558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 288 - 422
Target Start/End: Complemental strand, 11763737 - 11763603
Alignment:
Q  288 tttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagct 387  Q
    ||||||||||| || |||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||| || ||| ||||||||||||| |||  |    
T  11763737 tttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgagaattttattccaaggtatctagaaaaaatatgtttgattaatt 11763638  T
Q  388 ttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||| |||||||||||||| |||||    
T  11763637 ttataatattcctaagaaccataaaaatagggatt 11763603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 284 - 422
Target Start/End: Original strand, 45408981 - 45409119
Alignment:
Q  284 tttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggtt 383  Q
    ||||||| ||||||| || ||||||||||||||||||||||  |||||||||||||||| |||||||||| ||||| |||||| ||||||||||||| ||    
T  45408981 tttgttttaagtttaccaaatttattcctaggaataacatttattggaatataaagatgagaattttattccaaggtatttagcaaaaatatgtttgatt 45409080  T
Q  384 agctttataatattcctaggaaccataaaaatatggatt 422  Q
    |  ||||||||||| |||||||||||||||||| |||||    
T  45409081 aaatttataatatttctaggaaccataaaaataaggatt 45409119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 303 - 416
Target Start/End: Complemental strand, 34357020 - 34356908
Alignment:
Q  303 atttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctag 402  Q
    |||||||| |||||||| ||||||||||||||||| ||| ||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||    
T  34357020 atttattcttaggaatagcattccttggaatataa-gataggaattttattccaagaaatttaagaaaaatatgtttggttagctttataatattcctag 34356922  T
Q  403 gaaccataaaaata 416  Q
    ||||||||||||||    
T  34356921 gaaccataaaaata 34356908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 279 - 422
Target Start/End: Original strand, 14832536 - 14832679
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtt 378  Q
    |||||||||||||||||||| || ||||||| | | ||||||||||||||  ||||||||||||  ||||||||| | ||  |||||| |||||||||||    
T  14832536 gtgtgtttgtttcaagtttaccaaatttatttccaagaataacattccttaaaatataaagatgataattttattcctagatatttagaaaaaatatgtt 14832635  T
Q  379 tggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||| |||||||||||||| |||||    
T  14832636 tggttagctttataatattcctatgaaccataaaaataaggatt 14832679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 273 - 416
Target Start/End: Original strand, 45693908 - 45694051
Alignment:
Q  273 ctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaa 372  Q
    |||||| ||||||||||||||||||| || |||||||| ||||||||||||||||||||| ||||||||| |||||||||| ||||| ||||   |||||    
T  45693908 ctaaggatgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaacataaagatgagaattttattccaaggcattttaaaaaaa 45694007  T
Q  373 tatgtttggttagctttataatattcctaggaaccataaaaata 416  Q
     ||||||| ||| | ||||||||||||| |||||||||||||||    
T  45694008 aatgtttgcttaacattataatattcctgggaaccataaaaata 45694051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 280 - 416
Target Start/End: Complemental strand, 3254437 - 3254301
Alignment:
Q  280 tgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgttt 379  Q
    ||||||||||| ||||||| || |||||||  |||||||||||||| |||||||||||| ||| ||||||||||  |||| |||||| ||||||||||||    
T  3254437 tgtgtttgttttaagtttaccaaatttatttttaggaataacattctttggaatataaaaatgagaattttattctaaggtatttagaaaaaatatgttt 3254338  T
Q  380 ggttagctttataatattcctaggaaccataaaaata 416  Q
    ||||| ||| ||||||||||||| |||||||||||||    
T  3254337 ggttaacttcataatattcctagaaaccataaaaata 3254301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 276 - 416
Target Start/End: Original strand, 7007307 - 7007447
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||| ||||||| || |||||||  ||||||||||||| |||| |||||||||||| ||||||||||  || | |||||| ||||||||    
T  7007307 agggtgtgtttgttttaagtttaccaaatttattattaggaataacatttcttgaaatataaagatgagaattttattctaaagtatttagaaaaaatat 7007406  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaata 416  Q
    ||||||||| |||||||||||||||| ||||||| ||||||    
T  7007407 gtttggttaactttataatattcctaagaaccattaaaata 7007447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 276 - 422
Target Start/End: Original strand, 40569740 - 40569886
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||| | |||  ||||||||| ||||| |||||| ||||| ||    
T  40569740 agggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatatatatatgtaaattttattccaaggtatttagaaaaaagat 40569839  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||| | ||||||| |||| |||||||  ||||||| |||||    
T  40569840 gtttggttaacattataatgttccaaggaacctcaaaaatagggatt 40569886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 329 - 422
Target Start/End: Complemental strand, 39995435 - 39995342
Alignment:
Q  329 ggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  39995435 ggaatataaagatggaaattttattccaaggaatttatgaaaaatatgtttggttaactttataatattcctaggaaccataaaaatagggatt 39995342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 273 - 422
Target Start/End: Complemental strand, 5003187 - 5003038
Alignment:
Q  273 ctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaa 372  Q
    |||| ||||||||||||| || |||| || |||||||  ||||||||||||||||||||||||||||||| |||||||||| ||||| |||| |  ||||    
T  5003187 ctaaaggtgtgtttgtttaaaatttaccaaatttatttataggaataacattccttggaatataaagatgcgaattttattccaaggtatttggataaaa 5003088  T
Q  373 tatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
     ||||||||||| | || |||||||   ||||||||||||||||||||||    
T  5003087 gatgtttggttaacattttaatattttcaggaaccataaaaatatggatt 5003038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 284 - 422
Target Start/End: Original strand, 4875506 - 4875645
Alignment:
Q  284 tttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttag-gaaaaatatgtttggt 382  Q
    |||||||||||||| ||| |||||||| ||||||||| |||| |||||||||||||||| |||||||||| ||| | ||||||  ||||||||||||  |    
T  4875506 tttgtttcaagtttgtcaaatttattcttaggaataatattctttggaatataaagatgtgaattttattccaatgtatttagaaaaaaatatgttttct 4875605  T
Q  383 tagctttataatattcctaggaaccataaaaatatggatt 422  Q
    || | ||||||||| || |||||||||||||||| |||||    
T  4875606 taacattataatatgccgaggaaccataaaaatagggatt 4875645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 280 - 391
Target Start/End: Original strand, 1623078 - 1623188
Alignment:
Q  280 tgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgttt 379  Q
    |||||||||||||| ||||  | |||||||||||| ||||||||| ||||||||||||||||| |||||||||||||| | |||||| ||| ||||||||    
T  1623078 tgtgtttgtttcaattttactaaatttattcctagtaataacatttcttggaatataaagatgagaattttatttcaa-gtatttagaaaatatatgttt 1623176  T
Q  380 ggttagctttat 391  Q
    ||||| ||||||    
T  1623177 ggttaactttat 1623188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 315 - 422
Target Start/End: Original strand, 1988073 - 1988180
Alignment:
Q  315 gaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataaaaa 414  Q
    |||||||||||||| ||||||||| ||| |||||||||| ||||   ||| ||||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  1988073 gaataacattccttagaatataaatatgagaattttattccaagatttttgggaaaaatatgtttggttaactttataatattccttggaaccaaaaaaa 1988172  T
Q  415 tatggatt 422  Q
    || |||||    
T  1988173 tagggatt 1988180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 282 - 422
Target Start/End: Original strand, 13790018 - 13790159
Alignment:
Q  282 tgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaattt-aggaaaaatatgtttg 380  Q
    |||||||||||||||||||| |||||||  |||||||||||||||||| |||||| |||||  |||||||||  |||| |||| |  ||||| |||||||    
T  13790018 tgtttgtttcaagtttatcaaatttatttgtaggaataacattccttgaaatatatagatgtaaattttattctaaggtatttaaaaaaaaagatgtttg 13790117  T
Q  381 gttagctttataatattcctaggaaccataaaaatatggatt 422  Q
     ||| | |||||||||||| ||||||| |||||||| |||||    
T  13790118 attaacattataatattccaaggaaccttaaaaatagggatt 13790159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 284 - 416
Target Start/End: Complemental strand, 41298255 - 41298126
Alignment:
Q  284 tttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggtt 383  Q
    ||||||| |||| ||||| |||||||  |||||||||||||| |||||||||||||||| |||||||||||    | |||||  ||||| ||||||| ||    
T  41298255 tttgttttaagtatatcaaatttatttttaggaataacattcattggaatataaagatgagaattttattt---tgtatttaaaaaaaagatgtttgttt 41298159  T
Q  384 agctttataatattcctaggaaccataaaaata 416  Q
    | | |||||||||||| ||||||||||| ||||    
T  41298158 aacattataatattccaaggaaccataagaata 41298126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 284 - 337
Target Start/End: Original strand, 2521381 - 2521434
Alignment:
Q  284 tttgtttcaagtttatcacatttattcctaggaataacattccttggaatataa 337  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  2521381 tttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataa 2521434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 276 - 398
Target Start/End: Complemental strand, 14403555 - 14403431
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaa--gatgggaattttatttcaaggaatttaggaaaaat 373  Q
    |||||| |||||||| |||||||||| |||||||  ||| ||||||| | |||| ||||||||  ||||| ||||||||   ||||  ||||| ||||||    
T  14403555 agggtgagtttgttttaagtttatcaaatttatttttagaaataacagttcttgaaatataaaaagatggaaattttatactaaggtttttagaaaaaat 14403456  T
Q  374 atgtttggttagctttataatattc 398  Q
    || |||||||| |||||||||||||    
T  14403455 atttttggttaactttataatattc 14403431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 284 - 422
Target Start/End: Original strand, 13539399 - 13539537
Alignment:
Q  284 tttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggtt 383  Q
    ||||||||||||||| || |||||||  | |  |||||||| ||||||| ||||||||| ||||||||||  ||   |||||| ||||| ||||||| ||    
T  13539399 tttgtttcaagtttaccaaatttatttttggtgataacatttcttggaacataaagatgagaattttattctaaaatatttagaaaaaagatgtttgctt 13539498  T
Q  384 agctttataatattcctaggaaccataaaaatatggatt 422  Q
    | | ||||| |||||  || ||||||||||||| |||||    
T  13539499 aacattatagtattctcagaaaccataaaaataaggatt 13539537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 340 - 413
Target Start/End: Original strand, 14253340 - 14253413
Alignment:
Q  340 atgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataaaa 413  Q
    |||| ||||||||| |||   |||||||||||||||||||||||| ||||||||||||  |||||| |||||||    
T  14253340 atggaaattttattccaaaatatttaggaaaaatatgtttggttaactttataatatttttaggaaacataaaa 14253413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 354
Target Start/End: Original strand, 14253254 - 14253326
Alignment:
Q  282 tgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttattt 354  Q
    ||||||||| || |||| || |||||||  |||||||||||||| ||||||||||| |||| |||||||||||    
T  14253254 tgtttgttttaaatttaccaaatttatttttaggaataacattctttggaatataaggatgagaattttattt 14253326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 276 - 353
Target Start/End: Original strand, 25444922 - 25444999
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatt 353  Q
    ||||||||| ||||| |||||| ||| |||||||   ||||||||||||  ||||||||||||||||  |||||||||    
T  25444922 agggtgtgtatgttttaagtttgtcaaatttattttaaggaataacattttttggaatataaagatgataattttatt 25444999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 353
Target Start/End: Original strand, 25724753 - 25724825
Alignment:
Q  282 tgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaag-atgggaattttatt 353  Q
    |||||||||||||||||  | ||||||||| | ||||||| ||||||||||| ||| | |||||| |||||||    
T  25724753 tgtttgtttcaagtttactagatttattcccaagaataactttccttggaatttaaggaatgggagttttatt 25724825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 130; Significance: 3e-67; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 273 - 422
Target Start/End: Complemental strand, 11239472 - 11239323
Alignment:
Q  273 ctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaa 372  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  11239472 ctaagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaa 11239373  T
Q  373 tatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11239372 tatgtttggttagctttataatattcctaggaaccataaaaatagggatt 11239323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 275 - 422
Target Start/End: Original strand, 46359673 - 46359820
Alignment:
Q  275 aagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaata 374  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  46359673 aagggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttatgaaaaata 46359772  T
Q  375 tgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||    
T  46359773 tgtttggttagctttataatattcctaggaatcataaaaatagggatt 46359820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 280 - 422
Target Start/End: Complemental strand, 47115202 - 47115060
Alignment:
Q  280 tgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgttt 379  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  47115202 tgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgttt 47115103  T
Q  380 ggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  47115102 ggttagctttataatattcctaggaaccataaaaatagggatt 47115060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 274 - 422
Target Start/End: Complemental strand, 48340108 - 48339960
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||    
T  48340108 taagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttagaatataaagatgagaattttattccaaggaatttaggaaaaat 48340009  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  48340008 atgtttggttagctttataatattcctaggaaccataaaaatagggatt 48339960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 276 - 422
Target Start/End: Complemental strand, 6231850 - 6231704
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||| |||||||||    
T  6231850 agggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttgaaatataaagataggaattttattccaaggaatttaagaaaaatat 6231751  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  6231750 gtttggttagctttataatattcctaggaaccataaaaatagggatt 6231704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 276 - 422
Target Start/End: Complemental strand, 8476657 - 8476511
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  8476657 agggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatggaaattttattccaaggaatttaggaaaaatat 8476558  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  8476557 gtttggttagctttataatattcctaggaaccataaaaatagggatt 8476511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 276 - 422
Target Start/End: Original strand, 26848744 - 26848890
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  26848744 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatat 26848843  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||    
T  26848844 gtttggttaactttataatattcctaggaaccataaaaatagggatt 26848890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 276 - 422
Target Start/End: Complemental strand, 33218262 - 33218116
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  33218262 agggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaatttaggaaaaatat 33218163  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||    
T  33218162 gtttggttaactttataatattcctaggaaccataaaaatagggatt 33218116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 274 - 422
Target Start/End: Original strand, 40907986 - 40908133
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  40907986 taagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgaaatataaagatgggaattttattccaaggaatttaggaaaaat 40908085  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||    
T  40908086 atgtttggttagctttat-atattcctaggaaccataaaaatagggatt 40908133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 273 - 422
Target Start/End: Original strand, 20297512 - 20297661
Alignment:
Q  273 ctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaa 372  Q
    |||||||||||||||||| ||||||| || |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20297512 ctaagggtgtgtttgttttaagtttaccaaatttattcttaggaataacattctttggaatataaagatgggaattttatttcaaggaatttaggaaaaa 20297611  T
Q  373 tatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||  ||||||||||||||||||||||||||||||| |||||    
T  20297612 tatgtttggttgactttataatattcctaggaaccataaaaatagggatt 20297661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 278 - 422
Target Start/End: Original strand, 1098923 - 1099067
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    ||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1098923 ggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgt 1099022  T
Q  378 ttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||| ||||||||||||||| |||||||||||||||||| |||||    
T  1099023 ttggctagctttataatatttctaggaaccataaaaatagggatt 1099067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 278 - 422
Target Start/End: Complemental strand, 20414812 - 20414668
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  20414812 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaagaatttaggaaaaatatgt 20414713  T
Q  378 ttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||| |||||||||||||||||||| |||||||||||||| |||||    
T  20414712 ttgattagctttataatattcctaagaaccataaaaatagggatt 20414668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 279 - 422
Target Start/End: Complemental strand, 43719271 - 43719128
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtt 378  Q
    |||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||    
T  43719271 gtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagttgagaattttattccaaggaatttaggaaaaatatgtt 43719172  T
Q  379 tggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  43719171 tggttagctttataatattcttaggaaccataaaaatatggatt 43719128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 276 - 422
Target Start/End: Original strand, 24574289 - 24574435
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || |||||||| |||||||||||||||||| |||||||||||| |||||||||| ||||||||||| |||||||||    
T  24574289 agggtgtgtttgtttcaagtttaccaaatttattcataggaataacattccttgaaatataaagatgagaattttattccaaggaatttatgaaaaatat 24574388  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  24574389 gtttggttagctttataatattcctaggaaccataaaaataaggatt 24574435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 280 - 422
Target Start/End: Complemental strand, 31611330 - 31611188
Alignment:
Q  280 tgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgttt 379  Q
    ||||||||||||||||||| || |||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  31611330 tgtgtttgtttcaagtttaccaaatttattcttatgaataacattccttggaatataaagatgggaattttattccaaggaatttagaaaaaatatgttt 31611231  T
Q  380 ggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  31611230 ggttagctttataatattcctaggaaccataaaaatagggatt 31611188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 277 - 421
Target Start/End: Complemental strand, 9320797 - 9320652
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttc-aaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||    
T  9320797 gggtgtgtttgtttcaagtttatgaaatttattcataggaataacattccttggaatataaagatgagaattttattcctaaggaatttaggaaaaatat 9320698  T
Q  376 gtttggttagctttataatattcctaggaaccataaaaatatggat 421  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  9320697 gtttggttagctttataatattcctaggaaccataaaaatagggat 9320652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 278 - 422
Target Start/End: Original strand, 29512324 - 29512468
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    |||||||||||||||| |||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  29512324 ggtgtgtttgtttcaaatttaccaaatttattcctaggaataacattccttagaatataaagatgggaattttatttcaagaaatttaggaaaaatacgt 29512423  T
Q  378 ttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||    
T  29512424 ttggttagctttataatattcataggaaccataaaaatagggatt 29512468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 276 - 422
Target Start/End: Original strand, 44952030 - 44952176
Alignment:
Q  276 agggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatat 375  Q
    ||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  44952030 agggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttattccaaggaatttaggaaaaatat 44952129  T
Q  376 gtttggttagctttataatattcc-taggaaccataaaaatatggatt 422  Q
    ||||||||| |||||||||||||| |||||| |||||||||| |||||    
T  44952130 gtttggttaactttataatattccttaggaa-cataaaaatagggatt 44952176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 279 - 422
Target Start/End: Complemental strand, 43132502 - 43132359
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtt 378  Q
    ||||||||||||||||||||  | |||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||    
T  43132502 gtgtgtttgtttcaagtttactaaatttattcttaggaataacattccttggaatataaagatgagaattttattccaaggtatttaggaaaaatatgtt 43132403  T
Q  379 tggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||| |||||||||||||||||||||||| |||||| |||||    
T  43132402 tggttaactttataatattcctaggaaccatgaaaatagggatt 43132359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 274 - 422
Target Start/End: Complemental strand, 10823068 - 10822920
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||||||||||||  |||||||||||| |||||||||| ||||| |||||||||||||    
T  10823068 taagggtgtgtttgtttcaagtttagcaaatttatttctaggaataacattccttacaatataaagatgagaattttattccaaggtatttaggaaaaat 10822969  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||||||||||| ||||||||||||| ||||||||||| ||||| |||||    
T  10822968 atgtttggttaactttataatattcttaggaaccatacaaatagggatt 10822920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 282 - 422
Target Start/End: Complemental strand, 28124779 - 28124639
Alignment:
Q  282 tgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttgg 381  Q
    ||||||||||||||||| || |||||||  ||||| ||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||    
T  28124779 tgtttgtttcaagtttaccaaatttatttttaggattaacattccttggaatataaatatgagaattttattccaaggaatttaggaaaaatatgtttgg 28124680  T
Q  382 ttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||| |||||||||||||| |||||    
T  28124679 ttagctttataatattcctaagaaccataaaaatagggatt 28124639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 270 - 416
Target Start/End: Complemental strand, 53166079 - 53165933
Alignment:
Q  270 aatctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaa 369  Q
    ||||| |||||||||||||||||||||||||  ||||||| ||| ||||||||||||||| |||||||||||||| |||||||| ||||| |||||||||    
T  53166079 aatcttagggtgtgtttgtttcaagtttatccaatttatttctaagaataacattccttgaaatataaagatgggtattttattccaaggtatttaggaa 53165980  T
Q  370 aaatatgtttggttagctttataatattcctaggaaccataaaaata 416  Q
    ||||||||||||||| | |||||||||||||||||| ||||||||||    
T  53165979 aaatatgtttggttaaccttataatattcctaggaatcataaaaata 53165933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 278 - 416
Target Start/End: Complemental strand, 26849492 - 26849354
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    ||||||||||||| ||||||| || |||||||  ||||||||| ||| |||||||||||||||||| ||||||||||||||| |||||| ||||||||||    
T  26849492 ggtgtgtttgttttaagtttaccaaatttatttttaggaataatatttcttggaatataaagatggaaattttatttcaaggtatttagaaaaaatatgt 26849393  T
Q  378 ttggttagctttataatattcctaggaaccataaaaata 416  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  26849392 ttggttaactttataatattcataggaaccataaaaata 26849354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 273 - 422
Target Start/End: Complemental strand, 6832274 - 6832125
Alignment:
Q  273 ctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaa 372  Q
    ||||||||||||||||||||| |||| || ||||||||||| |||||||||| ||||||||||||||||| |||||||||| ||||| |||||| |||||    
T  6832274 ctaagggtgtgtttgtttcaaatttaccaaatttattcctaagaataacattacttggaatataaagatgagaattttattccaaggtatttagaaaaaa 6832175  T
Q  373 tatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||| ||| ||| |||||| | ||||| |||||||| |||||    
T  6832174 tatgtttggttaacttcatagtattccaaagaaccttaaaaataaggatt 6832125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 279 - 416
Target Start/End: Original strand, 40584336 - 40584473
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtt 378  Q
    ||||||||||||||||| || || ||||||||||| ||||||||||||||  ||||||||||| ||||||||||||||||| |||||  ||||| |||||    
T  40584336 gtgtgtttgtttcaagtgtaacaaatttattcctaagaataacattccttcaaatataaagataggaattttatttcaaggtatttaaaaaaaagatgtt 40584435  T
Q  379 tggttagctttataatattcctaggaaccataaaaata 416  Q
    |||||| | |||||||||||| ||||||| ||||||||    
T  40584436 tggttaacattataatattccaaggaaccttaaaaata 40584473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 278 - 422
Target Start/End: Complemental strand, 31436269 - 31436125
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    ||||||||||||||||||||| || |||||||||| | |||||||||| || |||||||||||| ||||||||||| ||||| || ||| ||||| ||||    
T  31436269 ggtgtgtttgtttcaagtttaccaaatttattcctggaaataacattctttagaatataaagataggaattttattccaaggtatatagaaaaaacatgt 31436170  T
Q  378 ttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||| ||||||||||| || |||| |||||||||| |||||    
T  31436169 ttggttagttttataatatttcttggaatcataaaaataaggatt 31436125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 279 - 416
Target Start/End: Original strand, 24783934 - 24784072
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtt 378  Q
    |||||||||||||||||||| || |||||||| || |||||||||||||||||||||||||||| ||||||||||  |||| |||||  |||||||||||    
T  24783934 gtgtgtttgtttcaagtttaccaaatttattcataagaataacattccttggaatataaagatgagaattttattctaaggtatttaaaaaaaatatgtt 24784033  T
Q  379 tggtt-agctttataatattcctaggaaccataaaaata 416  Q
    ||||| | ||||| |||||||| ||||||| ||||||||    
T  24784034 tggttaaactttagaatattccaaggaaccttaaaaata 24784072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 278 - 416
Target Start/End: Complemental strand, 12228601 - 12228463
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    |||||||||||| ||||||||||| |||||||| | |||||||||||  ||| |||||||||||| ||||||||||  |||| |||||  ||||||||||    
T  12228601 ggtgtgtttgttacaagtttatcaaatttattcttgggaataacattatttgaaatataaagatgagaattttattctaaggtatttaaaaaaaatatgt 12228502  T
Q  378 ttggttagctttataatattcctaggaaccataaaaata 416  Q
    |||||||| ||||| |||||| |||||| ||||||||||    
T  12228501 ttggttagttttatgatattcttaggaatcataaaaata 12228463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 281 - 422
Target Start/End: Original strand, 49216027 - 49216168
Alignment:
Q  281 gtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttg 380  Q
    |||||||||| ||||||  || | |||||| |||||||||  ||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||    
T  49216027 gtgtttgttttaagttttccaaaattattcttaggaataatgttccttggaatataaagatgggaattttattccaaggtatttagaaaaaatatgtttg 49216126  T
Q  381 gttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||| | |||||| ||||| | ||||| ||||||||| ||||    
T  49216127 gttaaccttataaaattccaaagaaccttaaaaatatagatt 49216168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 283 - 422
Target Start/End: Complemental strand, 38140710 - 38140571
Alignment:
Q  283 gtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggt 382  Q
    ||||||||||| ||||| | ||||||| ||||||||||||||||||||||||||||| || |||||||||| ||||| || ||| ||||| ||||||| |    
T  38140710 gtttgtttcaattttataaaatttatttctaggaataacattccttggaatataaaggtgtgaattttattccaaggtatatagaaaaaagatgtttgat 38140611  T
Q  383 tagctttataatattcctaggaaccataaaaatatggatt 422  Q
    || | ||||||||||||| ||||||  ||||||| |||||    
T  38140610 taacattataatattcctgggaacctaaaaaataaggatt 38140571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 277 - 422
Target Start/End: Complemental strand, 28770557 - 28770412
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatg 376  Q
    ||||||||||||||||| |||| || |||||||||||||||||||||||||||||| |||| |||| |||||||||| ||||| || ||| ||||  |||    
T  28770557 gggtgtgtttgtttcaaatttaccaaatttattcctaggaataacattccttggaacataatgatgagaattttattccaaggtatatagaaaaatgatg 28770458  T
Q  377 tttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||| ||| | ||||||||||    ||||||||||||||| |||||    
T  28770457 tttgtttaacgttataatattatcgggaaccataaaaatagggatt 28770412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 280 - 372
Target Start/End: Original strand, 6927817 - 6927909
Alignment:
Q  280 tgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaa 372  Q
    ||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||  |||| |||||| |||||    
T  6927817 tgtgtttgttttaagtttatcaaatttattactaggaataacattccttggaatataaagatgagaattttattctaaggtatttagaaaaaa 6927909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 277 - 422
Target Start/End: Original strand, 27822994 - 27823143
Alignment:
Q  277 gggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttag----gaaaaa 372  Q
    |||||||||||||||||||||| || |||||||  |||||||||||||| || ||| ||||| ||| ||||||||||| |||| ||||||     |||||    
T  27822994 gggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattctttcgaacataaatatgagaattttattttaaggtatttagaaaaaaaaaa 27823093  T
Q  373 tatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
     || |||| ||| | ||||||||||||||| || ||||||||||||||||    
T  27823094 aatatttgcttaacattataatattcctagaaatcataaaaatatggatt 27823143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 283 - 414
Target Start/End: Original strand, 18460582 - 18460712
Alignment:
Q  283 gtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggt 382  Q
    ||||||||||||||||||| ||||||| ||| ||||||||||  | | |||||||||||| |||||| ||| ||||| |||||  | |||||| ||||||    
T  18460582 gtttgtttcaagtttatcaaatttatttctacgaataacatttttcgaaatataaagatgagaatttgattacaaggtatttaaaagaaatatatttggt 18460681  T
Q  383 tagctttataatattcctaggaaccataaaaa 414  Q
    || ||||||||||||| || ||||||||||||    
T  18460682 taactttataatattcata-gaaccataaaaa 18460712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 348 - 422
Target Start/End: Original strand, 19532939 - 19533013
Alignment:
Q  348 tttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||    
T  19532939 tttattccaaggtatttaggaaaaatatgtttggttaactttataatattcctaggaaccatgaaaatagggatt 19533013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 278 - 364
Target Start/End: Original strand, 32070994 - 32071080
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaattt 364  Q
    |||| |||||||| || ||||||| ||||||||||| |||||||||| ||||||||||||||||| |||||||||| ||||| ||||    
T  32070994 ggtgggtttgttttaaatttatcaaatttattcctatgaataacatttcttggaatataaagatgagaattttattccaaggtattt 32071080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 288 - 416
Target Start/End: Original strand, 27093763 - 27093890
Alignment:
Q  288 tttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagct 387  Q
    ||||| |||||||| |||||||| ||  ||||| ||||||| ||||||||||||| |||||||||||||||| | ||| |||||| ||||||| ||| |     
T  27093763 tttcatgtttatcaaatttattcttaaaaataatattccttagaatataaagatgtgaattttatttcaaggta-ttaagaaaaagatgtttgattaaca 27093861  T
Q  388 ttataatattcctaggaaccataaaaata 416  Q
     ||||||||||| ||||||  ||||||||    
T  27093862 atataatattccaaggaacattaaaaata 27093890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 278 - 397
Target Start/End: Complemental strand, 31267694 - 31267575
Alignment:
Q  278 ggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgt 377  Q
    ||||||||||||| |||||||||  |||||||  ||||||||||||| |||  |||||||||||| |||||| |||| |||| |||||| ||||| ||||    
T  31267694 ggtgtgtttgttttaagtttatcggatttatttttaggaataacatttcttaaaatataaagatgtgaatttcattttaaggtatttagaaaaaagatgt 31267595  T
Q  378 ttggttagctttataatatt 397  Q
    || || | | ||||||||||    
T  31267594 ttagtcaacattataatatt 31267575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 32071256 - 32071309
Alignment:
Q  363 ttaggaaaaatatgtttggttagctttataatattcctaggaaccataaaaata 416  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32071256 ttagaaaaaatatgtttggttaactttataatattcctaggaaccataaaaata 32071309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 273 - 416
Target Start/End: Complemental strand, 28693783 - 28693640
Alignment:
Q  273 ctaagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaa 372  Q
    ||||||||||||||||||||| ||||  | |||||||||||| |||||  ||||||| ||  | |||||| ||||||||||||||||  | ||| |||||    
T  28693783 ctaagggtgtgtttgtttcaaatttactaaatttattcctagaaataattttccttgaaactttaagatgagaattttatttcaaggtttatagaaaaaa 28693684  T
Q  373 tatgtttggttagctttataatattcctaggaaccataaaaata 416  Q
     ||||||  ||| | |||||||||| |  | |||||||||||||    
T  28693683 gatgtttatttaacattataatatttccggaaaccataaaaata 28693640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 410
Target Start/End: Complemental strand, 2565749 - 2565666
Alignment:
Q  326 cttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaaccata 410  Q
    |||| |||| ||||||| |||||||||||||||| |||||  |||||||||||| |||| ||||||||||||| || ||||||||    
T  2565749 cttgaaatacaaagatgagaattttatttcaaggtatttaa-aaaaatatgtttagttaactttataatattcatatgaaccata 2565666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 416
Target Start/End: Complemental strand, 33650357 - 33650223
Alignment:
Q  282 tgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttgg 381  Q
    ||||||||||||||||| || |||||||  || ||||||||||  ||| ||| |||||||| ||||||||||  |||| ||| |  ||||| |||||||     
T  33650357 tgtttgtttcaagtttaccaaatttatttttatgaataacattatttgaaatctaaagatgagaattttattctaaggtattgaataaaaaaatgtttgc 33650258  T
Q  382 ttagctttataatattcctaggaaccataaaaata 416  Q
    ||| | |||||||||||   | |||||||||||||    
T  33650257 ttaacattataatattctcggaaaccataaaaata 33650223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 281 - 353
Target Start/End: Original strand, 45826064 - 45826136
Alignment:
Q  281 gtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatt 353  Q
    ||||||||||| ||||||  | ||||||||||||||||||| ||||| |||||||||  |||||| |||||||    
T  45826064 gtgtttgtttccagtttactagatttattcctaggaataactttcctgggaatataagaatgggagttttatt 45826136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 422
Target Start/End: Complemental strand, 1247212 - 1247102
Alignment:
Q  312 taggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttggttagctttataatattcctaggaaccataa 411  Q
    |||||||||||||  || ||||| | ||||| ||||||||||  || | |||   |||||||||||||||||| || ||||||| |||| || || ||||    
T  1247212 taggaataacattttttagaataaatagatgagaattttattctaaagtattcgagaaaaatatgtttggttaactctataatactccttggtactataa 1247113  T
Q  412 aaatatggatt 422  Q
    |||||||||||    
T  1247112 aaatatggatt 1247102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 353
Target Start/End: Complemental strand, 55435726 - 55435654
Alignment:
Q  281 gtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatt 353  Q
    ||||||||||||||||||  | |||||||| |  ||||||| ||||  ||||||||||||||||| |||||||    
T  55435726 gtgtttgtttcaagtttactagatttattcttgtgaataactttcccgggaatataaagatgggagttttatt 55435654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 311
Target Start/End: Original strand, 19532907 - 19532946
Alignment:
Q  272 tctaagggtgtgtttgtttcaagtttatcacatttattcc 311  Q
    ||||||||||||||||||||||||||| || |||||||||    
T  19532907 tctaagggtgtgtttgtttcaagtttaccaaatttattcc 19532946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 333
Target Start/End: Complemental strand, 2566524 - 2566471
Alignment:
Q  280 tgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaat 333  Q
    ||||||||||||||||||| || ||||||| || | ||||| ||||||||||||    
T  2566524 tgtgtttgtttcaagtttaccaaatttatttcttgaaataatattccttggaat 2566471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 121; Significance: 7e-62; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 274 - 422
Target Start/End: Original strand, 201646 - 201793
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaat 373  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  201646 taagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattctaaggaatttaggaaaaat 201745  T
Q  374 atgtttggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||    
T  201746 atgtttggttagctttat-atattcctaggaaccataaaaatagggatt 201793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 283 - 422
Target Start/End: Original strand, 143342 - 143482
Alignment:
Q  283 gtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaa-ttttatttcaaggaatttaggaaaaatatgtttgg 381  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| | ||||||||||||||    
T  143342 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaatttttatttcaaggtatttggaaaaaatatgtttgg 143441  T
Q  382 ttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    ||| |||||||||||||||||||||||||||| || |||||    
T  143442 ttaactttataatattcctaggaaccataaaattagggatt 143482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 282 - 422
Target Start/End: Original strand, 119051 - 119190
Alignment:
Q  282 tgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttgg 381  Q
    |||||| || ||||||| || |||||||| ||  |||||||||| |||||||||||||||| |||||||||||| ||  |||||| |||||  |||||||    
T  119051 tgtttgctttaagtttaccaaatttattcttaaaaataacattcattggaatataaagatgtgaattttatttc-agatatttagaaaaaaggtgtttgg 119149  T
Q  382 ttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    | | |  |||||||||||  |||||| ||| |||| |||||    
T  119150 tgaacactataatattccccggaaccttaagaatagggatt 119190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 96; Significance: 6e-47; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 279 - 422
Target Start/End: Complemental strand, 29298 - 29155
Alignment:
Q  279 gtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtt 378  Q
    |||||||| ||| |||||||||| ||||||||||| ||||||||||  ||||||||||||||| ||||||||||| |||||||||||| |||||||||||    
T  29298 gtgtgtttattttaagtttatcaaatttattcctatgaataacattttttggaatataaagataggaattttattccaaggaatttagaaaaaatatgtt 29199  T
Q  379 tggttagctttataatattcctaggaaccataaaaatatggatt 422  Q
    |||||||||||||||||||||||||||  ||||||||| |||||    
T  29198 tggttagctttataatattcctaggaattataaaaatagggatt 29155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 274 - 416
Target Start/End: Complemental strand, 3916 - 3773
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttagga-aaaa 372  Q
    ||||||||||||||||||||||  | || ||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| ||||    
T  3916 taagggtgtgtttgtttcaagtgcaccaaatttattcctatgaataacattccttggaatataaagataggaattttattccaaggtatttaggaaaaaa 3817  T
Q  373 tatgtttggttagctttataatattcctaggaaccataaaaata 416  Q
     |||||| |||| | |||||||||||| ||||||| ||||||||    
T  3816 aatgtttcgttaacattataatattccaaggaaccttaaaaata 3773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 274 - 416
Target Start/End: Original strand, 4186 - 4329
Alignment:
Q  274 taagggtgtgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttagg-aaaaa 372  Q
    ||||||||||||||||||||||  | || ||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||| ||||||| |||||    
T  4186 taagggtgtgtttgtttcaagtgcaccaaatttattcctatgaataacattccttggaatataaagataggaattttattccaaggtatttaggaaaaaa 4285  T
Q  373 tatgtttggttagctttataatattcctaggaaccataaaaata 416  Q
     |||||| |||| | |||||||||||| ||||||| ||||||||    
T  4286 aatgtttcgttaacattataatattccaaggaaccttaaaaata 4329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 282 - 416
Target Start/End: Complemental strand, 43436 - 43302
Alignment:
Q  282 tgtttgtttcaagtttatcacatttattcctaggaataacattccttggaatataaagatgggaattttatttcaaggaatttaggaaaaatatgtttgg 381  Q
    ||||| ||| |||||| ||| |||||||  ||||||||| |||  || ||||||||||||| ||||||||||| || | |||||| ||||| |||||||     
T  43436 tgtttattttaagtttgtcaaatttatttttaggaataatattttttagaatataaagatgtgaattttattttaaagtatttagaaaaaagatgtttgt 43337  T
Q  382 ttagctttataatattcctaggaaccataaaaata 416  Q
    ||| | |||| |||||  |||||||| ||||||||    
T  43336 ttaacattatgatatttttaggaaccttaaaaata 43302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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