View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13279_high_6 (Length: 538)
Name: NF13279_high_6
Description: NF13279
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13279_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 489; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 489; E-Value: 0
Query Start/End: Original strand, 18 - 531
Target Start/End: Complemental strand, 46105581 - 46105068
Alignment:
| Q |
18 |
tcaatatccttgatgcagctaagaaaatatcaggagcaggtttcaaattatcaaaagcatctgcagaaactattgcatcgaacctgataaaaatataaat |
117 |
Q |
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| T |
46105581 |
tcaatatccttgatgcagctaagaaaatatcaggagcaggtttcaaattctcaaaagcatctgcagaaactattgcatcgaacctgataaaaatataaat |
46105482 |
T |
|
| Q |
118 |
acaactgcaaaattttaacaaccttgatagacaacagattacaattgaagtcaatcttatgaagccatgcgtaaaatgtaataggtgctgttagcacttc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46105481 |
acaactgcaaaattttaacaaccttgatagacaacagattacaattgaagtcaatcttatgaagccatgcgtaaaatgtaataggtgctgttagcacttc |
46105382 |
T |
|
| Q |
218 |
atttaaaataaacatctaacagtttagtatataatatgcagcggacttacaactcgtcttggattattttgttttaatgtctcagtgtcgtcatgattaa |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46105381 |
atttaaaataaacatctaacagtttagtatataatatgcagcggacttacaactcgtcttggattattttgttttaatgtctcagtgtcgtcatgattaa |
46105282 |
T |
|
| Q |
318 |
atgaagaaattgcatnnnnnnnttcaaaagaaaatgccaataatatatagtgcgtattatcaataacaattaaaggtccatatcttcatgcacattcaac |
417 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46105281 |
atgaagaaattgcataaaaaaattcaaaagaaaatgccaataatatatagtgcgtattatcaataacaattaaaggtccatatcttcatgcacattcaac |
46105182 |
T |
|
| Q |
418 |
aagtcactcagaatgttaacttacattgacaatggcaaaccagcggcagctagatttgcatcaacctttatacgatcagcactagatgcaacagcgactt |
517 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46105181 |
aagtcactcagaatgttaacttacattgacaatggcaaaccagcggcagctagatttgcatcaacctttatacgatcagcactagatgcaacagcgactt |
46105082 |
T |
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| Q |
518 |
taagccctttgctt |
531 |
Q |
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|||||||||||||| |
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| T |
46105081 |
taagccctttgctt |
46105068 |
T |
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