View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1327_low_22 (Length: 252)
Name: NF1327_low_22
Description: NF1327
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1327_low_22 |
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Alignment Details
Target: chr1 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 6751752 - 6751547
Alignment:
| Q |
1 |
aagattttagcatgtaaaaaggcatcaaaatacagttaaatattcaatttaatggccattttgagtgtaaaatgcaatagcattctgtgtcaagtatttc |
100 |
Q |
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| T |
6751752 |
aagattttagcatgtaaaaaggcatcaaaatacagttaa-tattcaatttaatggccattttgagtgtaaaatgcaatagcattctgtgtcaagtatttc |
6751654 |
T |
|
| Q |
101 |
acccaacataatcgcannnnnnnnngttgagataatcacacgttttgttaatatgatctacttgccaattcaaattgaacaaataaaaattggcaaccta |
200 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6751653 |
acccaacataatcgca-ttttttttgttgagataatcacacgttttgttaatatgatctacttgccaattcaaattgaacaaataaaaattggcaaccta |
6751555 |
T |
|
| Q |
201 |
taataaca |
208 |
Q |
| |
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|||||||| |
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| T |
6751554 |
taataaca |
6751547 |
T |
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