View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13281_high_3 (Length: 672)

Name: NF13281_high_3
Description: NF13281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13281_high_3
NF13281_high_3
[»] chr4 (54 HSPs)
chr4 (46-657)||(5665253-5665863)
chr4 (534-650)||(20268894-20269011)
chr4 (534-651)||(37724692-37724809)
chr4 (527-614)||(20870892-20870979)
chr4 (527-614)||(49983858-49983945)
chr4 (540-626)||(45170679-45170765)
chr4 (541-651)||(45170819-45170929)
chr4 (533-614)||(18414787-18414868)
chr4 (573-649)||(4416813-4416889)
chr4 (534-614)||(49984066-49984146)
chr4 (527-614)||(4416541-4416628)
chr4 (535-614)||(4592624-4592703)
chr4 (527-614)||(11306514-11306601)
chr4 (527-614)||(18414947-18415034)
chr4 (536-651)||(20871101-20871215)
chr4 (588-647)||(4592706-4592765)
chr4 (527-614)||(37724504-37724591)
chr4 (527-614)||(54702250-54702337)
chr4 (573-651)||(11306589-11306667)
chr4 (535-613)||(31141745-31141823)
chr4 (573-651)||(48845711-48845789)
chr4 (534-603)||(2515765-2515834)
chr4 (573-650)||(45505395-45505472)
chr4 (579-651)||(17524203-17524275)
chr4 (534-613)||(4416745-4416824)
chr4 (527-602)||(17524464-17524539)
chr4 (582-649)||(20269209-20269276)
chr4 (588-650)||(43913394-43913456)
chr4 (540-614)||(48845777-48845851)
chr4 (588-650)||(48846064-48846126)
chr4 (573-651)||(49984134-49984212)
chr4 (534-614)||(45505327-45505407)
chr4 (527-614)||(48845974-48846061)
chr4 (573-651)||(4416475-4416553)
chr4 (579-629)||(4592399-4592449)
chr4 (573-647)||(12292892-12292966)
chr4 (544-614)||(36752924-36752994)
chr4 (573-651)||(37724438-37724516)
chr4 (571-649)||(52485343-52485421)
chr4 (573-630)||(18414742-18414799)
chr4 (535-600)||(45505138-45505203)
chr4 (541-614)||(46397371-46397444)
chr4 (539-599)||(17524284-17524344)
chr4 (535-650)||(43913662-43913775)
chr4 (571-651)||(45505058-45505138)
chr4 (534-613)||(21376115-21376194)
chr4 (588-651)||(31141678-31141741)
chr4 (588-651)||(31143749-31143812)
chr4 (588-651)||(49983792-49983855)
chr4 (588-650)||(52485692-52485755)
chr4 (573-651)||(5688729-5688807)
chr4 (532-650)||(24671952-24672070)
chr4 (588-633)||(16399266-16399311)
chr4 (579-651)||(17524545-17524617)
[»] chr7 (27 HSPs)
chr7 (539-651)||(24188171-24188283)
chr7 (540-649)||(7460844-7460953)
chr7 (588-649)||(10017944-10018005)
chr7 (527-614)||(36469795-36469882)
chr7 (527-609)||(7460641-7460723)
chr7 (573-651)||(17813975-17814053)
chr7 (573-651)||(22566302-22566380)
chr7 (530-614)||(22566368-22566450)
chr7 (527-614)||(34535944-34536031)
chr7 (588-641)||(9997985-9998038)
chr7 (573-649)||(48462128-48462205)
chr7 (573-649)||(7460572-7460648)
chr7 (527-599)||(24185748-24185820)
chr7 (527-614)||(6376431-6376518)
chr7 (536-614)||(8560694-8560772)
chr7 (533-603)||(34535767-34535837)
chr7 (588-649)||(24185670-24185731)
chr7 (540-611)||(7150186-7150257)
chr7 (579-650)||(43510880-43510951)
chr7 (533-571)||(6376626-6376664)
chr7 (588-650)||(48461793-48461854)
chr7 (588-629)||(6376387-6376428)
chr7 (588-629)||(6376710-6376751)
chr7 (596-649)||(34536042-34536095)
chr7 (605-649)||(34535695-34535739)
chr7 (615-651)||(36469911-36469947)
chr7 (534-598)||(38978370-38978434)
[»] chr1 (48 HSPs)
chr1 (529-649)||(31872709-31872829)
chr1 (535-651)||(25622607-25622723)
chr1 (527-614)||(8718457-8718544)
chr1 (535-649)||(18519587-18519701)
chr1 (528-602)||(48171698-48171772)
chr1 (527-630)||(14419840-14419936)
chr1 (533-614)||(18519382-18519463)
chr1 (535-614)||(143082-143161)
chr1 (527-614)||(22792355-22792442)
chr1 (537-614)||(34518225-34518302)
chr1 (530-614)||(19987399-19987483)
chr1 (577-649)||(34517965-34518037)
chr1 (527-614)||(35795577-35795664)
chr1 (579-650)||(48171778-48171849)
chr1 (579-649)||(33460227-33460297)
chr1 (573-650)||(142811-142888)
chr1 (533-598)||(14420046-14420111)
chr1 (573-650)||(48171442-48171519)
chr1 (579-651)||(8718538-8718610)
chr1 (535-614)||(31872868-31872947)
chr1 (605-651)||(8718406-8718452)
chr1 (573-651)||(33459894-33459972)
chr1 (588-650)||(35795667-35795729)
chr1 (579-649)||(36783419-36783489)
chr1 (588-649)||(22792628-22792689)
chr1 (535-614)||(3073043-3073122)
chr1 (527-614)||(33459960-33460047)
chr1 (588-651)||(35795312-35795375)
chr1 (535-614)||(42604695-42604774)
chr1 (535-609)||(142881-142955)
chr1 (605-651)||(6043447-6043493)
chr1 (588-630)||(18519337-18519379)
chr1 (588-650)||(22792290-22792352)
chr1 (537-603)||(34518040-34518106)
chr1 (573-651)||(42604965-42605043)
chr1 (588-649)||(3072979-3073040)
chr1 (536-577)||(33460160-33460201)
chr1 (579-650)||(14420121-14420192)
chr1 (588-651)||(19987333-19987396)
chr1 (535-614)||(22792546-22792625)
chr1 (579-650)||(37245637-37245708)
chr1 (600-650)||(143176-143226)
chr1 (573-651)||(31872935-31873012)
chr1 (605-651)||(37245936-37245982)
chr1 (573-651)||(42604629-42604707)
chr1 (533-571)||(48171542-48171580)
chr1 (541-614)||(3075195-3075268)
chr1 (537-577)||(36783345-36783385)
[»] chr8 (35 HSPs)
chr8 (534-651)||(18429441-18429558)
chr8 (588-651)||(18935052-18935115)
chr8 (541-651)||(7535299-7535400)
chr8 (573-650)||(9710216-9710293)
chr8 (527-614)||(34439484-34439571)
chr8 (536-614)||(16049545-16049623)
chr8 (533-614)||(4623134-4623215)
chr8 (573-646)||(18935384-18935457)
chr8 (533-614)||(25879632-25879713)
chr8 (579-651)||(7644779-7644850)
chr8 (573-649)||(23871002-23871078)
chr8 (573-649)||(34687755-34687831)
chr8 (588-650)||(21445985-21446047)
chr8 (539-609)||(34687824-34687894)
chr8 (588-649)||(16049828-16049889)
chr8 (544-613)||(18935119-18935188)
chr8 (537-577)||(7535524-7535564)
chr8 (527-614)||(4623333-4623419)
chr8 (527-614)||(23871163-23871250)
chr8 (527-614)||(25879815-25879902)
chr8 (534-609)||(34439292-34439367)
chr8 (588-650)||(4623069-4623131)
chr8 (605-651)||(32665914-32665960)
chr8 (573-651)||(34439559-34439637)
chr8 (536-613)||(165197-165274)
chr8 (588-649)||(18548539-18548600)
chr8 (579-651)||(4623442-4623514)
chr8 (579-650)||(7645125-7645196)
chr8 (588-651)||(25879567-25879629)
chr8 (588-651)||(34439221-34439284)
chr8 (599-649)||(3016043-3016093)
chr8 (536-614)||(18548603-18548681)
chr8 (533-602)||(7644856-7644925)
chr8 (542-602)||(7645059-7645119)
chr8 (554-614)||(18429611-18429671)
[»] chr5 (11 HSPs)
chr5 (499-649)||(16642983-16643128)
chr5 (573-651)||(19935433-19935511)
chr5 (540-614)||(33992400-33992474)
chr5 (573-649)||(16642751-16642827)
chr5 (579-649)||(25508146-25508216)
chr5 (589-651)||(33992334-33992396)
chr5 (571-651)||(33992669-33992749)
chr5 (536-614)||(33992605-33992683)
chr5 (582-649)||(19328409-19328476)
chr5 (557-614)||(34065283-34065340)
chr5 (582-626)||(32291139-32291183)
[»] chr2 (34 HSPs)
chr2 (535-649)||(1353100-1353214)
chr2 (527-651)||(14473505-14473629)
chr2 (541-651)||(13140566-13140676)
chr2 (573-647)||(26845517-26845591)
chr2 (529-614)||(29526856-29526941)
chr2 (527-614)||(44995320-44995407)
chr2 (533-651)||(32622217-32622335)
chr2 (535-616)||(3217348-3217429)
chr2 (527-614)||(13490239-13490326)
chr2 (535-651)||(15988012-15988125)
chr2 (588-651)||(39060307-39060370)
chr2 (573-651)||(43971849-43971927)
chr2 (529-614)||(3221089-3221174)
chr2 (530-614)||(15988513-15988597)
chr2 (534-602)||(43513826-43513894)
chr2 (588-651)||(13490173-13490236)
chr2 (527-614)||(27956790-27956877)
chr2 (605-651)||(6412464-6412510)
chr2 (588-649)||(6795522-6795583)
chr2 (529-614)||(13525241-13525326)
chr2 (533-614)||(14473796-14473877)
chr2 (588-649)||(32622539-32622600)
chr2 (534-614)||(24015876-24015956)
chr2 (535-614)||(43971781-43971861)
chr2 (588-651)||(3217284-3217347)
chr2 (588-651)||(13140289-13140352)
chr2 (600-651)||(14424238-14424289)
chr2 (527-614)||(24284060-24284147)
chr2 (597-651)||(1352831-1352885)
chr2 (579-653)||(24065870-24065944)
chr2 (573-643)||(27957056-27957126)
chr2 (536-613)||(1352898-1352975)
chr2 (534-614)||(26845448-26845529)
chr2 (588-653)||(29526944-29527009)
[»] chr6 (24 HSPs)
chr6 (527-651)||(29675130-29675255)
chr6 (536-649)||(22793566-22793679)
chr6 (535-614)||(10567528-10567607)
chr6 (527-614)||(10567722-10567809)
chr6 (588-650)||(34829906-34829968)
chr6 (534-651)||(28613194-28613311)
chr6 (579-651)||(28705851-28705923)
chr6 (530-614)||(32629314-32629398)
chr6 (573-651)||(17342887-17342965)
chr6 (540-629)||(34829602-34829691)
chr6 (539-647)||(6273620-6273728)
chr6 (573-651)||(6611973-6612051)
chr6 (573-651)||(22793300-22793378)
chr6 (573-649)||(32629064-32629140)
chr6 (535-614)||(6611676-6611755)
chr6 (588-634)||(6210300-6210346)
chr6 (544-613)||(32629129-32629198)
chr6 (534-603)||(34829823-34829892)
chr6 (534-614)||(29674942-29675022)
chr6 (588-651)||(11122251-11122314)
chr6 (573-625)||(6611636-6611688)
chr6 (542-594)||(17342973-17343025)
chr6 (534-570)||(19279068-19279104)
chr6 (544-600)||(28705759-28705815)
[»] chr3 (17 HSPs)
chr3 (527-614)||(54341268-54341355)
chr3 (533-614)||(33419605-33419686)
chr3 (527-598)||(37285809-37285879)
chr3 (543-614)||(48618545-48618616)
chr3 (527-599)||(30547992-30548064)
chr3 (579-651)||(33419883-33419955)
chr3 (534-646)||(39639825-39639937)
chr3 (541-614)||(19540889-19540962)
chr3 (541-614)||(51388033-51388106)
chr3 (571-650)||(33241846-33241925)
chr3 (579-650)||(37285889-37285960)
chr3 (589-651)||(19541185-19541247)
chr3 (588-623)||(19540851-19540886)
chr3 (588-630)||(51388109-51388151)
chr3 (527-603)||(33419802-33419878)
chr3 (591-651)||(48618835-48618895)
chr3 (579-651)||(54341438-54341510)
[»] scaffold0400 (2 HSPs)
scaffold0400 (579-651)||(9914-9986)
scaffold0400 (573-651)||(9578-9656)
[»] scaffold0365 (2 HSPs)
scaffold0365 (579-651)||(10557-10629)
scaffold0365 (573-651)||(10221-10299)
[»] scaffold0015 (2 HSPs)
scaffold0015 (579-651)||(47417-47489)
scaffold0015 (594-649)||(47291-47346)
[»] scaffold0548 (2 HSPs)
scaffold0548 (527-614)||(3292-3379)
scaffold0548 (573-651)||(3367-3445)
[»] scaffold0056 (3 HSPs)
scaffold0056 (527-614)||(62984-63071)
scaffold0056 (534-602)||(62803-62871)
scaffold0056 (573-651)||(63059-63137)
[»] scaffold0045 (1 HSPs)
scaffold0045 (579-651)||(29609-29681)
[»] scaffold1484 (1 HSPs)
scaffold1484 (389-444)||(171-226)


Alignment Details
Target: chr4 (Bit Score: 515; Significance: 0; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 515; E-Value: 0
Query Start/End: Original strand, 46 - 657
Target Start/End: Original strand, 5665253 - 5665863
Alignment:
Q  46 gctgaagcagcattgcagtgtttcagaataggcagaaggctagagggtcctttgagaggtttggtataaaggagaggataaggggnnnnnnnncgggagc 145  Q
    ||||||||||| ||||||| || ||||||||||||||| |||||||||| |||||||||||||||| |||| ||||| |||||||        |||||||    
T  5665253 gctgaagcagcgttgcagtcttgcagaataggcagaagcctagagggtcttttgagaggtttggtacaaagaagagggtaaggggttatttt-cgggagc 5665351  T
Q  146 agacgtagatagctgcctaaagggagctatagattgaggaggagggctttgaccagggaaaggaggaggagttcgacaatatcatggtcgaccagcatga 245  Q
    ||||  | ||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  5665352 agacagatatagctgcctaaagggagcaatagattgaggaggaggactttgaccatggaaaggaggaggagtttgacaatatcatggtcgaccagcatga 5665451  T
Q  246 cacttccgggtttggcccaaattttatgtgattatgcacttttcttatcactaatgtagttgtttttattttcatgtagttgttctaaaaataatgtggc 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5665452 cacttccgggtttggcccaaattttatgtgattatgcacttttcttatcactaatgtagttgtttttattttcatgtagttgttctaaaaataatgtggc 5665551  T
Q  346 cacttagtgttttgtaacatcgtgattcccttatccattgcactgcatatgcacttgtttgttattaatgagcttgctttttcttgaaatttatcagtct 445  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5665552 cacttagtgttttgtaacatcgtgattcccttatccattgcactgcatatgcacttgtttgttattaatgagcttgctttttcttgaaatttatcagtct 5665651  T
Q  446 gataacaactatttcaccaattgtatttcgaaagttgaggcatgcatgaatattcaacccaaatctttaaatggtcaagtgaagtgacggaagggactaa 545  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5665652 gataacaactatttcaccaattgtatttcgaaagttgaggcatgcatgaatattcaacccaaatctttaaatggtcaagtgaagtgacggaagggactaa 5665751  T
Q  546 cttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaa 645  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  5665752 cttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttgaaacctaaaataaacataagagatcagacatgcaa 5665851  T
Q  646 ttaagcttgtat 657  Q
    ||||||||||||    
T  5665852 ttaagcttgtat 5665863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 534 - 650
Target Start/End: Complemental strand, 20269011 - 20268894
Alignment:
Q  534 ggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaa-cataagggacaaacttaaaacctaaaataaacataagag 632  Q
    ||||| |||||||||||||||| ||||||||||||||||||||| |||||| | |||||| |||||||||| ||||||||| |||||||||||||| ||     
T  20269011 ggaagagactaacttatttcaatgtgagtaacgttttgaaccaacttgaaacttttaaaaacataagggaccaacttaaaatctaaaataaacatacgaa 20268912  T
Q  633 accagacatgcaattaag 650  Q
    |||| |||||||||||||    
T  20268911 accaaacatgcaattaag 20268894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 534 - 651
Target Start/End: Original strand, 37724692 - 37724809
Alignment:
Q  534 ggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagaga 633  Q
    ||||| |||||||||||| ||||||||||||||||||| ||||| |||||| | ||||||| |||||||  ||||||||| |||||||||||||||||||    
T  37724692 ggaagagactaacttattccaacgtgagtaacgttttggaccaacttgaaacttttaaaacctaagggatcaacttaaaaactaaaataaacataagaga 37724791  T
Q  634 ccagacatgcaattaagc 651  Q
     || ||||||||||||||    
T  37724792 tcaaacatgcaattaagc 37724809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 527 - 614
Target Start/End: Complemental strand, 20870979 - 20870892
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||| || || |||||| | ||||||| |||||||| ||||||||||    
T  20870979 aagtgacggaagggactaacttattccaatgtgagtaacgttttggacaaacttgaaacttttaaaacgtaagggaccaacttaaaac 20870892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 527 - 614
Target Start/End: Complemental strand, 49983945 - 49983858
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||||||||| |||||||||||||  || ||||||||||||||||||||| || ||||| |||||||||||||||| ||||| ||||    
T  49983945 aagtgacggaatggactaacttattcaaatgtgagtaacgttttgaaccaacttaaaatttttaaaacataagggaccaacttcaaac 49983858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 540 - 626
Target Start/End: Complemental strand, 45170765 - 45170679
Alignment:
Q  540 gactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaaca 626  Q
    |||||||||||| ||||||||||||| ||||| ||||| |||||| | ||||||| |||||||| ||||||||| ||||||||||||    
T  45170765 gactaacttattccaacgtgagtaacattttggaccaacttgaaacttttaaaacctaagggaccaacttaaaaactaaaataaaca 45170679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 541 - 651
Target Start/End: Original strand, 45170819 - 45170929
Alignment:
Q  541 actaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagaca 640  Q
    ||||| ||||| ||||||||||||||||||| ||||| || ||| | ||||||||| | |||| || |||||| |||||||||||||||| || || |||    
T  45170819 actaatttattccaacgtgagtaacgttttggaccaacttaaaacttttaaaacatgaaggaccaatttaaaaactaaaataaacataagggatcaaaca 45170918  T
Q  641 tgcaattaagc 651  Q
    |||||||||||    
T  45170919 tgcaattaagc 45170929  T

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Target: chr4; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 533 - 614
Target Start/End: Complemental strand, 18414868 - 18414787
Alignment:
Q  533 cggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||| |||||||||||| ||||||||||||||||||||||||| |||||||| ||||||  |||||||| ||||| ||||    
T  18414868 cggaagagactaacttattccaacgtgagtaacgttttgaaccaacttgaaatttttaaaatgtaagggaccaacttgaaac 18414787  T

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Target: chr4; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 573 - 649
Target Start/End: Original strand, 4416813 - 4416889
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaa 649  Q
    ||||| || ||||| |||||||||||||||| ||||||||| ||||||||||||||||||| || ||||||||||||    
T  4416813 accaacttaaaatttttaaaacataagggaccaacttaaaaactaaaataaacataagagatcaaacatgcaattaa 4416889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 534 - 614
Target Start/End: Original strand, 49984066 - 49984146
Alignment:
Q  534 ggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||||||||||||||| ||||||||||||||||||| ||||| ||||||   |||||||||||||||| ||||| ||||    
T  49984066 ggaagggactaacttattccaacgtgagtaacgttttggaccaacttgaaaactttaaaacataagggaccaacttgaaac 49984146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 527 - 614
Target Start/End: Complemental strand, 4416628 - 4416541
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||||| | ||||||| ||| |||| ||||| ||||    
T  4416628 aagtgactgaagggactaacttattccaacgtgagtaacgttttggaccaacttgaaacttttaaaacgtaaaggaccaacttgaaac 4416541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 535 - 614
Target Start/End: Original strand, 4592624 - 4592703
Alignment:
Q  535 gaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||| |||||| |||||  || ||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||    
T  4592624 gaagagactaatttattctaatgtgagtaacgttttgaaccaacttgaaactgttaaaacataagggaccaacttaaaac 4592703  T

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Target: chr4; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 527 - 614
Target Start/End: Original strand, 11306514 - 11306601
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||||| | ||||||| |||||||| ||||| ||||    
T  11306514 aagtgacagaagggactaacttattccaaagtgagtaacgttttggaccaacttgaaacttttaaaacgtaagggaccaacttgaaac 11306601  T

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Target: chr4; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 527 - 614
Target Start/End: Original strand, 18414947 - 18415034
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||||| |||| |||||||||||||||||||||||||||||||| ||||| |||||| | |||||||  ||||||| ||||| ||||    
T  18414947 aagtgacagaagagactaacttatttcaacgtgagtaacgttttggaccaacttgaaacttttaaaacgcaagggaccaacttgaaac 18415034  T

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Target: chr4; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 536 - 651
Target Start/End: Original strand, 20871101 - 20871215
Alignment:
Q  536 aagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagacc 635  Q
    ||||||| |||||||| ||||||||| |||||||| |||||| |||||| | ||||||||||| |||| ||| ||||| |||||||||||||||| ||      
T  20871101 aagggaccaacttattccaacgtgagcaacgttttaaaccaacttgaaacttttaaaacataaaggaccaac-taaaaactaaaataaacataagggatg 20871199  T
Q  636 agacatgcaattaagc 651  Q
    | || |||||||||||    
T  20871200 aaacgtgcaattaagc 20871215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 588 - 647
Target Start/End: Original strand, 4592706 - 4592765
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaatt 647  Q
    |||||||||||| ||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  4592706 ttaaaacataagagaccaacttaaaacctaaaataaacataagggaccaaacatgcaatt 4592765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 527 - 614
Target Start/End: Complemental strand, 37724591 - 37724504
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||||||||| |||||||||||| |||| |||||||||||||| ||||| |||||| | ||||||  |||||||| ||||| ||||    
T  37724591 aagtgacggaagagactaacttattccaacatgagtaacgttttggaccaatttgaaaattttaaaatgtaagggaccaacttgaaac 37724504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 527 - 614
Target Start/End: Original strand, 54702250 - 54702337
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||||||||| |||| |||||||  || ||||||||| ||||||| ||| || ||| |||||||||||||||||| ||||||||||    
T  54702250 aagtgacggaagagactgacttattctaatgtgagtaacattttgaatcaacttaaaactgttaaaacataagggaccaacttaaaac 54702337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 573 - 651
Target Start/End: Original strand, 11306589 - 11306667
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||| |||||| | |||||||||||||||| ||||| ||| |||||||||||||||| || || ||||||||||||||    
T  11306589 accaacttgaaacttttaaaacataagggaccaacttgaaaactaaaataaacataagggatcaaacatgcaattaagc 11306667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 535 - 613
Target Start/End: Complemental strand, 31141823 - 31141745
Alignment:
Q  535 gaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaa 613  Q
    |||||||||| ||||| ||||||||| |||||||||| || || |||||| | |||||||||||||||| |||||||||    
T  31141823 gaagggactagcttatatcaacgtgattaacgttttggacgaatttgaaacttttaaaacataagggactaacttaaaa 31141745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 573 - 651
Target Start/End: Complemental strand, 48845789 - 48845711
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||| |||||| | |||||||||||||| | |||||| || ||||||||||||||||||| || ||||||||||||||    
T  48845789 accaacttgaaacttttaaaacataaggggccaacttataaactaaaataaacataagagatcaaacatgcaattaagc 48845711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 534 - 603
Target Start/End: Complemental strand, 2515834 - 2515765
Alignment:
Q  534 ggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggac 603  Q
    |||||||||| |||||||  || ||||||||||||||||||||| ||||||||| |||||||||| ||||    
T  2515834 ggaagggactgacttattctaatgtgagtaacgttttgaaccaacttgaaattggtaaaacataaaggac 2515765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 573 - 650
Target Start/End: Original strand, 45505395 - 45505472
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaag 650  Q
    ||||| |||||| | |||||||||||||||| ||||| ||| |||||||||||||||| || || |||||||||||||    
T  45505395 accaacttgaaacttttaaaacataagggaccaacttgaaaactaaaataaacataagggatcaaacatgcaattaag 45505472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 579 - 651
Target Start/End: Complemental strand, 17524275 - 17524203
Alignment:
Q  579 ttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    |||||| | |||||||||||||||| ||||| ||| |||||||||||||||| || || ||||||||||||||    
T  17524275 ttgaaacttttaaaacataagggaccaacttgaaaactaaaataaacataagggatcaaacatgcaattaagc 17524203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 534 - 613
Target Start/End: Original strand, 4416745 - 4416824
Alignment:
Q  534 ggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaa 613  Q
    |||||||||||||||||| ||| ||||||||||||||| ||||| || ||| | ||||||  |||||||| |||||||||    
T  4416745 ggaagggactaacttattccaatgtgagtaacgttttggaccaacttaaaacttttaaaatgtaagggaccaacttaaaa 4416824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 527 - 602
Target Start/End: Original strand, 17524464 - 17524539
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataaggga 602  Q
    ||||||| ||||||||||||||||| |||||| ||||||||||||  |||| || ||| | |||||||||||||||    
T  17524464 aagtgactgaagggactaacttattccaacgtaagtaacgttttggtccaacttaaaacttttaaaacataaggga 17524539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 582 - 649
Target Start/End: Original strand, 20269209 - 20269276
Alignment:
Q  582 aaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaa 649  Q
    ||||| |||||||||||| ||| |||||||||| ||||||||||||| |||| || ||||||||||||    
T  20269209 aaatttttaaaacataagagaccaacttaaaacgtaaaataaacatacgagatcaaacatgcaattaa 20269276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 588 - 650
Target Start/End: Complemental strand, 43913456 - 43913394
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaag 650  Q
    |||||| ||||||||| ||||||||| |||||||||||||||| || || |||||||||||||    
T  43913456 ttaaaatataagggaccaacttaaaaactaaaataaacataagggatcaaacatgcaattaag 43913394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 540 - 614
Target Start/End: Complemental strand, 48845851 - 48845777
Alignment:
Q  540 gactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||||||||||||| ||||||||| ||||| ||||| || ||||| ||||||| |||||||| ||||| ||||    
T  48845851 gactaacttatttcaatgtgagtaacattttggaccaacttaaaatttttaaaacgtaagggaccaacttgaaac 48845777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 588 - 650
Target Start/End: Original strand, 48846064 - 48846126
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaag 650  Q
    |||||||||||||||| |||||||||  ||||||||||||||| || || |||||||||||||    
T  48846064 ttaaaacataagggaccaacttaaaaagtaaaataaacataagggatcaaacatgcaattaag 48846126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 573 - 651
Target Start/End: Original strand, 49984134 - 49984212
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||| |||||| | ||||||||||||| || ||| | |||||||||||||||||||| || || ||||||||||||||    
T  49984134 accaacttgaaacttttaaaacataaggaaccaacatgaaacctaaaataaacataagggatcaaacatgcaattaagc 49984212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 534 - 614
Target Start/End: Original strand, 45505327 - 45505407
Alignment:
Q  534 ggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||| ||||||||||||  || ||||||||||||||| ||||| |||||| | ||||||| |||||||| ||||| ||||    
T  45505327 ggaagagactaacttattctaatgtgagtaacgttttggaccaacttgaaacttttaaaacgtaagggaccaacttgaaac 45505407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 527 - 614
Target Start/End: Original strand, 48845974 - 48846061
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||||| |||| |||||| ||||| ||||||||||||||||||   |||| |||||| | ||||||||||||| || | ||||||||    
T  48845974 aagtgactgaagagactaatttattccaacgtgagtaacgttttagtccaacttgaaacttttaaaacataaggcaccatcttaaaac 48846061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 573 - 651
Target Start/End: Complemental strand, 4416553 - 4416475
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||| |||||| | |||||||||||||||  ||||||||| ||||||||||  |||| || || ||||||||||||||    
T  4416553 accaacttgaaacttttaaaacataagggatcaacttaaaaactaaaataaatgtaagggatcaaacatgcaattaagc 4416475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 579 - 629
Target Start/End: Complemental strand, 4592449 - 4592399
Alignment:
Q  579 ttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataa 629  Q
    |||||| | |||||||||||||||| ||||||||||||||| |||||||||    
T  4592449 ttgaaacttttaaaacataagggaccaacttaaaacctaaattaaacataa 4592399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 573 - 647
Target Start/End: Complemental strand, 12292966 - 12292892
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaatt 647  Q
    ||||| |||||| | |||||||| ||||||| ||||| |||||||||||||||||||| ||  | ||||||||||    
T  12292966 accaacttgaaacttttaaaacaaaagggaccaactttaaacctaaaataaacataagggattaaacatgcaatt 12292892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 544 - 614
Target Start/End: Complemental strand, 36752994 - 36752924
Alignment:
Q  544 aacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||||| ||||||| ||||||||||| ||||| |||||||| |||||||  ||||||| ||||| ||||    
T  36752994 aacttattccaacgtgggtaacgttttggaccaacttgaaatttttaaaacgcaagggaccaacttgaaac 36752924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 573 - 651
Target Start/End: Complemental strand, 37724516 - 37724438
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||| |||||| | ||||| ||| | |||| || |||||| ||||||||||||||||||| || ||||||||||||||    
T  37724516 accaacttgaaacttttaaatcatgaaggaccaatttaaaaactaaaataaacataagagatcatacatgcaattaagc 37724438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 649
Target Start/End: Complemental strand, 52485421 - 52485343
Alignment:
Q  571 gaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaa 649  Q
    ||||||| || ||| | |||||||||||||||  ||||||||| |||||||||||||||  || || ||||||||||||    
T  52485421 gaaccaacttaaaacttttaaaacataagggatcaacttaaaaactaaaataaacataatggatcaaacatgcaattaa 52485343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 573 - 630
Target Start/End: Complemental strand, 18414799 - 18414742
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataag 630  Q
    ||||| |||||| | |||||||||||||||| |||||||||  |||||||||||||||    
T  18414799 accaacttgaaacttttaaaacataagggaccaacttaaaaattaaaataaacataag 18414742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 535 - 600
Target Start/End: Complemental strand, 45505203 - 45505138
Alignment:
Q  535 gaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagg 600  Q
    ||||||||||| ||||| ||||||||||| ||||||| ||||| |||||| | ||||||| |||||    
T  45505203 gaagggactaatttattccaacgtgagtagcgttttggaccaacttgaaacttttaaaacgtaagg 45505138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 614
Target Start/End: Complemental strand, 46397444 - 46397371
Alignment:
Q  541 actaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||| |||||| |||||||||||||||||| ||||| || ||| | ||||||| |||||||| ||||| ||||    
T  46397444 actaatttatttgaacgtgagtaacgttttggaccaacttaaaacttttaaaacgtaagggaccaacttgaaac 46397371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 539 - 599
Target Start/End: Complemental strand, 17524344 - 17524284
Alignment:
Q  539 ggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataag 599  Q
    ||||||||||||| ||| ||||||||||||||| | ||| |||||| | ||||||||||||    
T  17524344 ggactaacttattccaatgtgagtaacgttttggatcaatttgaaacttttaaaacataag 17524284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 535 - 650
Target Start/End: Original strand, 43913662 - 43913775
Alignment:
Q  535 gaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagac 634  Q
    |||||||||||||||||  ||||||| |||  ||||| ||||| |||||||| | ||||| ||| |||| | |||||||| |  |  ||||||||||||     
T  43913662 gaagggactaacttattctaacgtgaataatattttggaccaacttgaaattttgaaaacgtaaaggactagcttaaaacttcta--aaacataagagat 43913759  T
Q  635 cagacatgcaattaag 650  Q
    || |||||||||||||    
T  43913760 caaacatgcaattaag 43913775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 571 - 651
Target Start/End: Complemental strand, 45505138 - 45505058
Alignment:
Q  571 gaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    |||||||  ||||| | ||||||||| ||  || ||||||||| |||||||||||||||| || || ||||||||||||||    
T  45505138 gaaccaacatgaaacttttaaaacattagtaaccaacttaaaaactaaaataaacataagggatcaaacatgcaattaagc 45505058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 534 - 613
Target Start/End: Complemental strand, 21376194 - 21376115
Alignment:
Q  534 ggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaa 613  Q
    ||||| |||||||||||||||| |||  || | ||||||||||| |||||| | |||||| ||||||||  |||||||||    
T  21376194 ggaagtgactaacttatttcaatgtgtataccattttgaaccaacttgaaacttttaaaatataagggatcaacttaaaa 21376115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 588 - 651
Target Start/End: Complemental strand, 31141741 - 31141678
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    |||||||||||  ||| ||||| |||||||| ||||||||| | ||||| ||||||||||||||    
T  31141741 ttaaaacataaatgaccaacttgaaacctaagataaacatacgggaccaaacatgcaattaagc 31141678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 588 - 651
Target Start/End: Original strand, 31143749 - 31143812
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    |||||||||||||||  ||| | ||||||||||||||||  || ||||| ||||||||||||||    
T  31143749 ttaaaacataagggatcaacatgaaacctaaaataaacaccagggaccaaacatgcaattaagc 31143812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 588 - 651
Target Start/End: Complemental strand, 49983855 - 49983792
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||||||||| |||| ||||| ||| ||||||||| || ||| ||||| ||||||||||||||    
T  49983855 ttaaaacataaaggaccaacttgaaatctaaaataagcacaagggaccaaacatgcaattaagc 49983792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 588 - 650
Target Start/End: Original strand, 52485692 - 52485755
Alignment:
Q  588 ttaaaacataagggacaaacttaaaac-ctaaaataaacataagagaccagacatgcaattaag 650  Q
    |||||| ||||||||| |||||||||  ||||||||||||||| ||| || |||||||||||||    
T  52485692 ttaaaatataagggaccaacttaaaaaactaaaataaacataaaagatcaaacatgcaattaag 52485755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 573 - 651
Target Start/End: Original strand, 5688729 - 5688807
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||| || ||||| |||||||||||| ||  |||||||||| |||| ||||||| || ||||| ||||| ||||||||    
T  5688729 accaacttaaaatttttaaaacataagagagcaacttaaaacttaaagtaaacattagggaccaaacatgaaattaagc 5688807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 532 - 650
Target Start/End: Complemental strand, 24672070 - 24671952
Alignment:
Q  532 acggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataaga 631  Q
    ||||||| ||||| || ||| ||| |||| |||| ||||  ||||| |||||| | |||||||||||  ||  ||||||||| ||||||||||| ||||     
T  24672070 acggaagtgactagctaattgcaatgtgaataacatttttgaccaacttgaaacttttaaaacataaatgatcaacttaaaatctaaaataaacttaagg 24671971  T
Q  632 gaccagacatgcaattaag 650  Q
    ||||| | || ||||||||    
T  24671970 gaccaaatatacaattaag 24671952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 588 - 633
Target Start/End: Original strand, 16399266 - 16399311
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagaga 633  Q
    ||||||||||| |||| || |||||| |||||||||||||||||||    
T  16399266 ttaaaacataaaggaccaatttaaaatctaaaataaacataagaga 16399311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 651
Target Start/End: Original strand, 17524545 - 17524617
Alignment:
Q  579 ttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    |||||| | |||||| |||| | || ||||| ||| ||||||||||| ||||||| || ||||||||||||||    
T  17524545 ttgaaacttttaaaaaataaagtaccaacttgaaaactaaaataaacgtaagagatcaaacatgcaattaagc 17524617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 3e-28; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 539 - 651
Target Start/End: Original strand, 24188171 - 24188283
Alignment:
Q  539 ggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccaga 638  Q
    ||||||||||||| | ||||||||||| ||||||||||| |||||| | |||||||||||||||| ||||| |||||||| ||||||||||| || || |    
T  24188171 ggactaacttattccgacgtgagtaacattttgaaccaacttgaaactcttaaaacataagggaccaacttgaaacctaatataaacataagcgatcaaa 24188270  T
Q  639 catgcaattaagc 651  Q
    |||||||||||||    
T  24188271 catgcaattaagc 24188283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 540 - 649
Target Start/End: Original strand, 7460844 - 7460953
Alignment:
Q  540 gactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagac 639  Q
    |||||||||||| ||||||||||||||||||  ||||| |||||| | |||||||||||| ||| ||||| ||| |||||||||||||||| || || ||    
T  7460844 gactaacttattccaacgtgagtaacgttttagaccaatttgaaacttttaaaacataagtgaccaacttgaaaactaaaataaacataagggatcaaac 7460943  T
Q  640 atgcaattaa 649  Q
    ||||||||||    
T  7460944 atgcaattaa 7460953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 588 - 649
Target Start/End: Original strand, 10017944 - 10018005
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaa 649  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||| |||| |||||||    
T  10017944 ttaaaacataagagaccaacttaaaacctaaaataaacataagagaccaaacatacaattaa 10018005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 527 - 614
Target Start/End: Original strand, 36469795 - 36469882
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||| || || |||||||||||| ||||||||||||| ||||| ||||| |||||| | ||||||| |||||||| ||||||||||    
T  36469795 aagtgatgggagagactaacttattccaacgtgagtaacattttggaccaacttgaaacttttaaaacgtaagggaccaacttaaaac 36469882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 527 - 609
Target Start/End: Complemental strand, 7460723 - 7460641
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaactt 609  Q
    |||||||||||  |||||||||||||||||||| |||  |||||| ||||| |||||||| ||||||| |||||||| |||||    
T  7460723 aagtgacggaaaagactaacttatttcaacgtgggtagtgttttggaccaacttgaaatttttaaaacgtaagggaccaactt 7460641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 573 - 651
Target Start/End: Complemental strand, 17814053 - 17813975
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||| |||||| | |||||||||||| ||| ||||| ||||||||||||||||||||||| || ||||| ||||||||    
T  17814053 accaatttgaaacttttaaaacataagagaccaacttgaaacctaaaataaacataagagatcaaacatggaattaagc 17813975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 573 - 651
Target Start/End: Complemental strand, 22566380 - 22566302
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||| |||||| | |||||||||||||||| || |||||| |||||||||||||||| || || ||||||||||||||    
T  22566380 accaacttgaaacttttaaaacataagggaccaatttaaaaactaaaataaacataagggatcaaacatgcaattaagc 22566302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 530 - 614
Target Start/End: Complemental strand, 22566450 - 22566368
Alignment:
Q  530 tgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||   |||| | ||||||| |||||||| ||||| ||||    
T  22566450 tgacggaagggactaatttatttcaacgtgagtaacgttttggaccaa--cgaaacttttaaaacgtaagggaccaacttgaaac 22566368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 527 - 614
Target Start/End: Original strand, 34535944 - 34536031
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||  | ||| |||||| |  |||||| |||| ||| ||||||||||    
T  34535944 aagtgaccgaagggactaacttattccaacgtgagtaacgtttttgatcaacttgaaacttctaaaacgtaagagaccaacttaaaac 34536031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 588 - 641
Target Start/End: Original strand, 9997985 - 9998038
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacat 641  Q
    |||||||||||||||| ||| ||||||||| |||||||||||||||||| ||||    
T  9997985 ttaaaacataagggaccaacctaaaacctataataaacataagagaccaaacat 9998038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 573 - 649
Target Start/End: Original strand, 48462128 - 48462205
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaat-aaacataagagaccagacatgcaattaa 649  Q
    ||||| |||||| | |||||||||||||||| ||||||||| ||||||| |||||||||||| || ||||| ||||||    
T  48462128 accaacttgaaacttttaaaacataagggaccaacttaaaaactaaaataaaacataagagatcaaacatgtaattaa 48462205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 573 - 649
Target Start/End: Complemental strand, 7460648 - 7460572
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaa 649  Q
    ||||| |||||||| |||||||||||||||  ||||| ||| |||||||||||||||| || || ||||| ||||||    
T  7460648 accaacttgaaatttttaaaacataagggatcaacttgaaaactaaaataaacataagggatcaaacatgaaattaa 7460572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 527 - 599
Target Start/End: Complemental strand, 24185820 - 24185748
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataag 599  Q
    |||| |||||||||||||||||||||||||||||||||   |||| ||||| ||||||   ||||||||||||    
T  24185820 aagtaacggaagggactaacttatttcaacgtgagtaaatatttggaccaacttgaaacctttaaaacataag 24185748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 527 - 614
Target Start/End: Complemental strand, 6376518 - 6376431
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||||  ||| ||||||||||||  || ||||| ||||||||||| ||| |||||| | ||||||| |||||||| ||||||||||    
T  6376518 aagtgacaaaagagactaacttattcaaatgtgagaaacgttttgaatcaacttgaaacttttaaaacctaagggaccaacttaaaac 6376431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 536 - 614
Target Start/End: Complemental strand, 8560772 - 8560694
Alignment:
Q  536 aagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||||||||||||| ||| ||||||||||||||| |||||  ||||| | ||||||  || ||||| ||||||||||    
T  8560772 aagggactaacttattacaatgtgagtaacgttttggaccaacatgaaacttttaaaatgtaggggaccaacttaaaac 8560694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 533 - 603
Target Start/End: Complemental strand, 34535837 - 34535767
Alignment:
Q  533 cggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggac 603  Q
    ||||||||||||||||||| |||  |||||||||||||| ||||| || ||| | ||||||| ||||||||    
T  34535837 cggaagggactaacttattccaatatgagtaacgttttggaccaacttaaaacttttaaaacgtaagggac 34535767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 588 - 649
Target Start/End: Complemental strand, 24185731 - 24185670
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaa 649  Q
    ||||||||||| |||| ||||| ||||||||||||||||  || ||||| ||||||||||||    
T  24185731 ttaaaacataaaggaccaacttgaaacctaaaataaacacgagtgaccaaacatgcaattaa 24185670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 540 - 611
Target Start/End: Original strand, 7150186 - 7150257
Alignment:
Q  540 gactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaa 611  Q
    ||||||||||||  |||||||||| ||||||| || || || ||||| | ||| ||||||||||||||||||    
T  7150186 gactaacttattaaaacgtgagtaccgttttggacgaacttaaaattatcaaagcataagggacaaacttaa 7150257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 579 - 650
Target Start/End: Complemental strand, 43510951 - 43510880
Alignment:
Q  579 ttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaag 650  Q
    |||||| | ||||||||||| | |  |||||||||| | ||||||||||||||||||| ||||| |||||||    
T  43510951 ttgaaacttttaaaacataatgaattaacttaaaacttgaaataaacataagagaccaaacatgtaattaag 43510880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 533 - 571
Target Start/End: Original strand, 6376626 - 6376664
Alignment:
Q  533 cggaagggactaacttatttcaacgtgagtaacgttttg 571  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  6376626 cggaagggactaacttattttaacgtgaataacgttttg 6376664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 588 - 650
Target Start/End: Complemental strand, 48461854 - 48461793
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaag 650  Q
    ||||||||||| |||  ||||||||| |||||| |||||||||||| || |||||||||||||    
T  48461854 ttaaaacataaaggatcaacttaaaaactaaaacaaacataagagatca-acatgcaattaag 48461793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 588 - 629
Target Start/End: Complemental strand, 6376428 - 6376387
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataa 629  Q
    ||||||||||| | || |||||||||||||||||||||||||    
T  6376428 ttaaaacataaagaaccaacttaaaacctaaaataaacataa 6376387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 588 - 629
Target Start/End: Original strand, 6376710 - 6376751
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataa 629  Q
    |||||||||||  ||| |||||||||||||||||||||||||    
T  6376710 ttaaaacataaatgaccaacttaaaacctaaaataaacataa 6376751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 596 - 649
Target Start/End: Original strand, 34536042 - 34536095
Alignment:
Q  596 taagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaa 649  Q
    |||||||| ||||||||| |||| ||||||||||| || || ||||||||||||    
T  34536042 taagggaccaacttaaaaactaagataaacataagggatcaaacatgcaattaa 34536095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 605 - 649
Target Start/End: Complemental strand, 34535739 - 34535695
Alignment:
Q  605 aacttaaaacctaaaataaacataagagaccagacatgcaattaa 649  Q
    ||||||||| |||||||||||||||| || || ||||||||||||    
T  34535739 aacttaaaaactaaaataaacataagggatcaaacatgcaattaa 34535695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 615 - 651
Target Start/End: Original strand, 36469911 - 36469947
Alignment:
Q  615 ctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||||||||||||||||| || ||||||||||||||    
T  36469911 ctaaaataaacataagagatcaaacatgcaattaagc 36469947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 534 - 598
Target Start/End: Complemental strand, 38978434 - 38978370
Alignment:
Q  534 ggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataa 598  Q
    ||||| ||||||||||||| |  |||||||| ||||| |||||| || ||||| |||||||||||    
T  38978434 ggaagagactaacttattttattgtgagtaatgttttaaaccaatttaaaatttttaaaacataa 38978370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 3e-28; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 529 - 649
Target Start/End: Complemental strand, 31872829 - 31872709
Alignment:
Q  529 gtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacata 628  Q
    |||| |||| ||||||||||||||||| ||||||||||||||| ||||| |||||| | ||||||| |||||||| ||||| ||| ||||||||||||||    
T  31872829 gtgatggaatggactaacttatttcaatgtgagtaacgttttggaccaacttgaaacttttaaaacgtaagggaccaactttaaaactaaaataaacata 31872730  T
Q  629 agagaccagacatgcaattaa 649  Q
    || || || ||||||||||||    
T  31872729 agggatcaaacatgcaattaa 31872709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 535 - 651
Target Start/End: Complemental strand, 25622723 - 25622607
Alignment:
Q  535 gaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagac 634  Q
    |||| |||||||||||| ||| ||||||||||||||||||||| |||||| | | |||||||||| ||| || || |||||||||||||||||||| |||    
T  25622723 gaagagactaacttattccaatgtgagtaacgttttgaaccaacttgaaactttcaaaacataagagactaatttgaaacctaaaataaacataagggac 25622624  T
Q  635 cagacatgcaattaagc 651  Q
     | ||||||||||||||    
T  25622623 taaacatgcaattaagc 25622607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 527 - 614
Target Start/End: Original strand, 8718457 - 8718544
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||||| |||| |||||||||||| ||| ||||||||||||||||||||| |||||| | |||||||||||||||||||||| ||||    
T  8718457 aagtgacagaagagactaacttattccaatgtgagtaacgttttgaaccaacttgaaaattttaaaacataagggacaaacttgaaac 8718544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 535 - 649
Target Start/End: Original strand, 18519587 - 18519701
Alignment:
Q  535 gaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagac 634  Q
    |||| |||||||||||| ||||||||||||||||||  | ||| |||||| | ||||||| || | ||| ||||| ||| |||||||||||||||||||     
T  18519587 gaagagactaacttattccaacgtgagtaacgttttagatcaacttgaaacttttaaaacgtatgagaccaacttgaaaactaaaataaacataagagat 18519686  T
Q  635 cagacatgcaattaa 649  Q
    || ||||||||||||    
T  18519687 caaacatgcaattaa 18519701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 528 - 602
Target Start/End: Original strand, 48171698 - 48171772
Alignment:
Q  528 agtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataaggga 602  Q
    ||||||||||||||||||||||||  || ||||||||||||||||||||| |||||| | |||||||||||||||    
T  48171698 agtgacggaagggactaacttattcaaatgtgagtaacgttttgaaccaacttgaaacttttaaaacataaggga 48171772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 527 - 630
Target Start/End: Complemental strand, 14419936 - 14419840
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaaca 626  Q
    |||||||||||| |||||||||||| | ||||| |||| |||||||||||| ||       |||||||||||||||| ||||||||||||||||||||||    
T  14419936 aagtgacggaagagactaacttattccgacgtgggtaatgttttgaaccaactt-------ttaaaacataagggaccaacttaaaacctaaaataaaca 14419844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 533 - 614
Target Start/End: Complemental strand, 18519463 - 18519382
Alignment:
Q  533 cggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||||||||||||||||||||| ||||||||||||||  | ||| |||||||| ||||||| |||||||| ||||||||||    
T  18519463 cggaagggactaacttatttcaaagtgagtaacgttttatatcaacttgaaatttttaaaacgtaagggaccaacttaaaac 18519382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 535 - 614
Target Start/End: Original strand, 143082 - 143161
Alignment:
Q  535 gaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||| |||||||||||| ||||||||||||||||||| ||||| |||||| | ||||||| |||||||| ||||||||||    
T  143082 gaagagactaacttattgcaacgtgagtaacgttttggaccaacttgaaacttttaaaacgtaagggaccaacttaaaac 143161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 527 - 614
Target Start/End: Complemental strand, 22792442 - 22792355
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||||||||||| |||||||||||||||  |||||||||||||||| |||  ||||| | ||||||||||| |||| ||||||||||    
T  22792442 aagtgacggaaggtactaacttatttcaatatgagtaacgttttgaatcaacatgaaacttttaaaacataacggaccaacttaaaac 22792355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 537 - 614
Target Start/End: Original strand, 34518225 - 34518302
Alignment:
Q  537 agggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||||||||||||  |||||||||||||||||| ||||| |||||||| ||||||| |||||||| || |||||||    
T  34518225 agggactaacttattctaacgtgagtaacgttttggaccaacttgaaatttttaaaacgtaagggaccaatttaaaac 34518302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 530 - 614
Target Start/End: Complemental strand, 19987483 - 19987399
Alignment:
Q  530 tgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||| ||||||||||||||||| ||| ||||||||||||||| | ||| |||||| | ||||||| |||||||| ||||||||||    
T  19987483 tgactgaagggactaacttattccaatgtgagtaacgttttggatcaacttgaaacttttaaaacttaagggaccaacttaaaac 19987399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 577 - 649
Target Start/End: Complemental strand, 34518037 - 34517965
Alignment:
Q  577 agttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaa 649  Q
    |||||||| ||||||||||||| |||| ||||||||| |||||||||||||||| || || ||||||||||||    
T  34518037 agttgaaactgttaaaacataatggaccaacttaaaaactaaaataaacataagggatcaaacatgcaattaa 34517965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 527 - 614
Target Start/End: Original strand, 35795577 - 35795664
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||| ||||| ||||||||||||   | ||||||||||||||||||||| |||||| | |||||||||||||||| || |||||||    
T  35795577 aagtgatggaagagactaacttattcttatgtgagtaacgttttgaaccaacttgaaacttttaaaacataagggaccaatttaaaac 35795664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 579 - 650
Target Start/End: Original strand, 48171778 - 48171849
Alignment:
Q  579 ttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaag 650  Q
    |||||| | ||||||||||| |||| ||||| |||||||||||||||||||| ||||| |||||||||||||    
T  48171778 ttgaaacttttaaaacataaaggaccaacttgaaacctaaaataaacataagggaccaaacatgcaattaag 48171849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 579 - 649
Target Start/End: Original strand, 33460227 - 33460297
Alignment:
Q  579 ttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaa 649  Q
    |||||| | |||||||||||||||| ||||| ||| ||||||||||||||||||| || ||||||||||||    
T  33460227 ttgaaacttttaaaacataagggaccaacttgaaaactaaaataaacataagagatcaaacatgcaattaa 33460297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 573 - 650
Target Start/End: Complemental strand, 142888 - 142811
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaag 650  Q
    ||||| |||||| | |||||||| ||||||| |||||||||||||||||| ||||||| ||| | |||||||||||||    
T  142888 accaacttgaaaattttaaaacacaagggaccaacttaaaacctaaaatacacataagggacaaaacatgcaattaag 142811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 533 - 598
Target Start/End: Original strand, 14420046 - 14420111
Alignment:
Q  533 cggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataa 598  Q
    |||||| |||||||||||| ||||||||||||||||||| ||||| |||||||  |||||||||||    
T  14420046 cggaagagactaacttattccaacgtgagtaacgttttggaccaacttgaaatctttaaaacataa 14420111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 573 - 650
Target Start/End: Complemental strand, 48171519 - 48171442
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaag 650  Q
    ||||| |||||| | |||||||||||||||| ||| | |||||||||||||||||||| || || |||||||||||||    
T  48171519 accaacttgaaacttttaaaacataagggaccaacctgaaacctaaaataaacataagggatcaaacatgcaattaag 48171442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 579 - 651
Target Start/End: Original strand, 8718538 - 8718610
Alignment:
Q  579 ttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    |||||| | |||||| ||||||||| |||||||||||||||||||||||| | || || ||||||||||||||    
T  8718538 ttgaaacttttaaaaaataagggaccaacttaaaacctaaaataaacatatgggatcaaacatgcaattaagc 8718610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 535 - 614
Target Start/End: Original strand, 31872868 - 31872947
Alignment:
Q  535 gaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||||||  |||||| ||||||||||||||||||| ||||| |||||| | ||||||| |||||||| ||||| ||||    
T  31872868 gaagggactggcttattccaacgtgagtaacgttttggaccaacttgaaacttttaaaacgtaagggaccaacttgaaac 31872947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 605 - 651
Target Start/End: Complemental strand, 8718452 - 8718406
Alignment:
Q  605 aacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  8718452 aacttaaaacctaaaataaacacaagagaccaaacatgcaattaagc 8718406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 573 - 651
Target Start/End: Complemental strand, 33459972 - 33459894
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||| |||||| | |||||||||||||||| ||||| ||| |||||||||||||||| || ||  |||||||||||||    
T  33459972 accaacttgaaacttttaaaacataagggactaacttgaaaactaaaataaacataagggatcaagcatgcaattaagc 33459894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 588 - 650
Target Start/End: Original strand, 35795667 - 35795729
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaag 650  Q
    ||||||||| |||||| ||||||||| |||||||||||||||  ||||| |||||||||||||    
T  35795667 ttaaaacatcagggaccaacttaaaatctaaaataaacataaaggaccaaacatgcaattaag 35795729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 579 - 649
Target Start/End: Original strand, 36783419 - 36783489
Alignment:
Q  579 ttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaa 649  Q
    |||||||| |||||||||||  ||| ||||||||| ||||||| |||||||||||||| |||| |||||||    
T  36783419 ttgaaatttttaaaacataaaagaccaacttaaaatctaaaatgaacataagagaccaaacatacaattaa 36783489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 588 - 649
Target Start/End: Original strand, 22792628 - 22792689
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaa 649  Q
    ||||||| |||||||| |||||||||||||||||||||||| | ||||| |||| |||||||    
T  22792628 ttaaaacttaagggaccaacttaaaacctaaaataaacatatgggaccaaacatacaattaa 22792689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 535 - 614
Target Start/End: Complemental strand, 3073122 - 3073043
Alignment:
Q  535 gaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||||||||||||||| |||||||| |||| ||||  ||||| |||||| | ||||||| |||| ||| ||||||||||    
T  3073122 gaagggactaacttattccaacgtgaataacattttagaccaacttgaaacttttaaaacgtaagagaccaacttaaaac 3073043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 527 - 614
Target Start/End: Complemental strand, 33460047 - 33459960
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||||||||||||||||| |||||  |||||| ||||| ||||| ||||| |||||| | ||||||| ||| |||| ||||| ||||    
T  33460047 aagtgacggaagggactaatttattataacgtgcgtaacattttggaccaacttgaaacttttaaaacgtaaaggaccaacttgaaac 33459960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 588 - 651
Target Start/End: Complemental strand, 35795375 - 35795312
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    |||||||  ||||||| ||||| ||| ||||||||||||||||||| || ||||||||||||||    
T  35795375 ttaaaactcaagggaccaacttgaaatctaaaataaacataagagatcaaacatgcaattaagc 35795312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 535 - 614
Target Start/End: Complemental strand, 42604774 - 42604695
Alignment:
Q  535 gaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||| ||||||||||| ||||||||||||||||||  ||||| |||||| | |||||||  ||||||| ||||| ||||    
T  42604774 gaaggaactaacttattccaacgtgagtaacgttttagaccaacttgaaacttttaaaactaaagggaccaacttgaaac 42604695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 535 - 609
Target Start/End: Complemental strand, 142955 - 142881
Alignment:
Q  535 gaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaactt 609  Q
    ||||||||||||||| | ||| || ||||||||||| ||| || |||||| | |||||||||||||||| |||||    
T  142955 gaagggactaacttactccaatgtaagtaacgttttaaacaaatttgaaacttttaaaacataagggaccaactt 142881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 605 - 651
Target Start/End: Complemental strand, 6043493 - 6043447
Alignment:
Q  605 aacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    |||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  6043493 aacttaaaacctaaaataaatataagggaccaaacatgcaattaagc 6043447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 588 - 630
Target Start/End: Complemental strand, 18519379 - 18519337
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataag 630  Q
    |||||||||||||||| ||||||||| ||||||||||||||||    
T  18519379 ttaaaacataagggaccaacttaaaaactaaaataaacataag 18519337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 588 - 650
Target Start/End: Complemental strand, 22792352 - 22792290
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaag 650  Q
    |||||||| ||||||| |||||||||| ||||||||||||| | ||||| | |||||||||||    
T  22792352 ttaaaacaaaagggaccaacttaaaacttaaaataaacatatgggaccaaatatgcaattaag 22792290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 537 - 603
Target Start/End: Complemental strand, 34518106 - 34518040
Alignment:
Q  537 agggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggac 603  Q
    ||||||||||||| ||||| ||||||||||||||||||||| || ||| | ||||||| || |||||    
T  34518106 agggactaacttaattcaatgtgagtaacgttttgaaccaacttaaaacttttaaaacgtaggggac 34518040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 573 - 651
Target Start/End: Original strand, 42604965 - 42605043
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||| |||||| | ||||||| |||||| | ||||| ||| |||||||||||||||| || || ||||||||||||||    
T  42604965 accaacttgaaacttttaaaacctaagggtccaacttgaaaactaaaataaacataagggatcaaacatgcaattaagc 42605043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 588 - 649
Target Start/End: Complemental strand, 3073040 - 3072979
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaa 649  Q
    |||||||| ||||||| ||||||||| |||||||||||||||  || || ||||||||||||    
T  3073040 ttaaaacacaagggaccaacttaaaatctaaaataaacataaaggatcaaacatgcaattaa 3072979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 536 - 577
Target Start/End: Original strand, 33460160 - 33460201
Alignment:
Q  536 aagggactaacttatttcaacgtgagtaacgttttgaaccaa 577  Q
    |||||||||||||||| ||||||||||||||||||| |||||    
T  33460160 aagggactaacttattccaacgtgagtaacgttttggaccaa 33460201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 579 - 650
Target Start/End: Original strand, 14420121 - 14420192
Alignment:
Q  579 ttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaag 650  Q
    |||||| | |||||||||||  ||| || |||||||||||||||||||||||  | || |||||||||||||    
T  14420121 ttgaaacttttaaaacataatagactaatttaaaacctaaaataaacataaggaatcaaacatgcaattaag 14420192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 588 - 651
Target Start/End: Complemental strand, 19987396 - 19987333
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||||||||| |||  ||||||||| |||||||||||||| | || || ||||||||||||||    
T  19987396 ttaaaacataaaggaacaacttaaaaactaaaataaacatatgggatcaaacatgcaattaagc 19987333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 535 - 614
Target Start/End: Original strand, 22792546 - 22792625
Alignment:
Q  535 gaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||| |||||||||||| ||| ||||||||||||||| || || ||||||   || |||| |||||||| ||||||||||    
T  22792546 gaagcgactaacttattccaatgtgagtaacgttttggactaacttgaaacctttcaaacgtaagggaccaacttaaaac 22792625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 579 - 650
Target Start/End: Complemental strand, 37245708 - 37245637
Alignment:
Q  579 ttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaag 650  Q
    |||||| | |||||| ||||| ||| ||||||||| |||||||||||||||| || || | |||||||||||    
T  37245708 ttgaaacttttaaaatataagagaccaacttaaaaactaaaataaacataagggatcaaatatgcaattaag 37245637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 600 - 650
Target Start/End: Original strand, 143176 - 143226
Alignment:
Q  600 ggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaag 650  Q
    |||| |||||||||||||||||||||||||| || || |||| ||||||||    
T  143176 ggaccaacttaaaacctaaaataaacataagggatcaaacatacaattaag 143226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 573 - 651
Target Start/End: Original strand, 31872935 - 31873012
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||| |||||| | |||||||||| ||||| ||||| ||| |||||||||||||||| || || | ||||||||||||    
T  31872935 accaacttgaaacttttaaaacata-gggaccaacttgaaaactaaaataaacataagggatcaaatatgcaattaagc 31873012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 605 - 651
Target Start/End: Original strand, 37245936 - 37245982
Alignment:
Q  605 aacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||||||| |||||||||||||||| || || ||||||||||||||    
T  37245936 aacttaaaaactaaaataaacataagggatcaaacatgcaattaagc 37245982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 573 - 651
Target Start/End: Complemental strand, 42604707 - 42604629
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||| |||||| | |||||| |||| | || ||||| ||| |||||||||||||||| || || ||||||||||||||    
T  42604707 accaacttgaaacttttaaaatataaagtaccaacttgaaaactaaaataaacataagggatcaaacatgcaattaagc 42604629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 533 - 571
Target Start/End: Complemental strand, 48171580 - 48171542
Alignment:
Q  533 cggaagggactaacttatttcaacgtgagtaacgttttg 571  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  48171580 cggaatggactaacttattccaacgtgagtaacgttttg 48171542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 614
Target Start/End: Original strand, 3075195 - 3075268
Alignment:
Q  541 actaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||||||||| ||| ||||||||||||||| || || |||||| | ||||||| ||| |||| ||||| ||||    
T  3075195 actaacttattccaatgtgagtaacgttttggacaaacttgaaacttttaaaacgtaatggaccaacttgaaac 3075268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 537 - 577
Target Start/End: Original strand, 36783345 - 36783385
Alignment:
Q  537 agggactaacttatttcaacgtgagtaacgttttgaaccaa 577  Q
    ||||||||||||||| ||| ||||| |||||||||||||||    
T  36783345 agggactaacttattacaatgtgagcaacgttttgaaccaa 36783385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 2e-26; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 534 - 651
Target Start/End: Complemental strand, 18429558 - 18429441
Alignment:
Q  534 ggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagaga 633  Q
    ||||||||||||||||||  |||||||||||  ||||| ||||| |||||| | |||||| ||||||||| ||||| ||| |||||||||||||||||||    
T  18429558 ggaagggactaacttattctaacgtgagtaatattttggaccaacttgaaacttttaaaatataagggaccaacttgaaaactaaaataaacataagaga 18429459  T
Q  634 ccagacatgcaattaagc 651  Q
     || ||||||||||||||    
T  18429458 tcaaacatgcaattaagc 18429441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 588 - 651
Target Start/End: Complemental strand, 18935115 - 18935052
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    |||||||| ||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||    
T  18935115 ttaaaacaaaagggaccaacttaaaacttaaaataaacataagagaccaaacatgcaattaagc 18935052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 541 - 651
Target Start/End: Complemental strand, 7535400 - 7535299
Alignment:
Q  541 actaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagaca 640  Q
    ||||||||||| ||| ||||||||||||||||||||| ||         |||||||||  ||| |||||||||| ||||||||||||||||||||| |||    
T  7535400 actaacttattccaatgtgagtaacgttttgaaccaactt---------aaaacataaaagaccaacttaaaacgtaaaataaacataagagaccaaaca 7535310  T
Q  641 tgcaattaagc 651  Q
    |||||||||||    
T  7535309 tgcaattaagc 7535299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 573 - 650
Target Start/End: Complemental strand, 9710293 - 9710216
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaag 650  Q
    ||||| |||||| | |||||||||||||||| ||||||||| |||||||||||||||| || || |||||||||||||    
T  9710293 accaacttgaaacttttaaaacataagggaccaacttaaaaactaaaataaacataagggatcaaacatgcaattaag 9710216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 527 - 614
Target Start/End: Original strand, 34439484 - 34439571
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||||||||| |||||||||| | ||||||||||||||||||| ||||| || ||| | ||||||| |||||||| ||||| ||||    
T  34439484 aagtgacggaagagactaacttaatccaacgtgagtaacgttttggaccaactttaaacttttaaaacgtaagggaccaacttgaaac 34439571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 536 - 614
Target Start/End: Complemental strand, 16049623 - 16049545
Alignment:
Q  536 aagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||||||||||||| ||| ||| ||||||||||| ||||| |||||||| |||||||  ||||||| ||||||||||    
T  16049623 aagggactaacttattccaatgtgggtaacgttttggaccaacttgaaatttttaaaacgaaagggaccaacttaaaac 16049545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 533 - 614
Target Start/End: Complemental strand, 4623215 - 4623134
Alignment:
Q  533 cggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||||||||||||||||||||| ||||||||| ||||| ||||| ||||||   ||||||| |||| ||| ||||||||||    
T  4623215 cggaagggactaacttatttcaatgtgagtaacattttggaccaacttgaaacctttaaaacgtaagagaccaacttaaaac 4623134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 573 - 646
Target Start/End: Original strand, 18935384 - 18935457
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaat 646  Q
    ||||| |||||| | |||||||||||||||| ||| | |||||||||||||||||||| ||||| |||||||||    
T  18935384 accaacttgaaacttttaaaacataagggaccaacatgaaacctaaaataaacataagggaccaaacatgcaat 18935457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 533 - 614
Target Start/End: Complemental strand, 25879713 - 25879632
Alignment:
Q  533 cggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||||||||||||||||| ||||||| |||||||||||||| || |||||| | ||||||| |||| ||| || |||||||    
T  25879713 cggaagggactaacttattccaacgtgggtaacgttttgaactaacttgaaactattaaaacgtaagtgaccaatttaaaac 25879632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 579 - 651
Target Start/End: Complemental strand, 7644850 - 7644779
Alignment:
Q  579 ttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    |||||| | |||||||||||||||| ||||||||| |||||||||||||||| || || ||||||||||||||    
T  7644850 ttgaaacttttaaaacataagggaccaacttaaaaactaaaataaacataag-gatcaaacatgcaattaagc 7644779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 573 - 649
Target Start/End: Complemental strand, 23871078 - 23871002
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaa 649  Q
    ||||| |||||| | |||| ||||||||||||||||| ||||  |||||||||||||||||||| ||| ||||||||    
T  23871078 accaacttgaaaattttaatacataagggacaaacttgaaactcaaaataaacataagagaccaaacaagcaattaa 23871002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 573 - 649
Target Start/End: Complemental strand, 34687831 - 34687755
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaa 649  Q
    ||||| |||||||| ||||||||||| | || |||||||||||||||||||||||||| |  || ||||||||||||    
T  34687831 accaacttgaaatttttaaaacataaagaaccaacttaaaacctaaaataaacataaggggtcaaacatgcaattaa 34687755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 588 - 650
Target Start/End: Complemental strand, 21446047 - 21445985
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaag 650  Q
    ||||||| |||||||| ||||||||| |||||||||| ||||| ||||| |||||||||||||    
T  21446047 ttaaaacgtaagggaccaacttaaaatctaaaataaatataagggaccaaacatgcaattaag 21445985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 539 - 609
Target Start/End: Complemental strand, 34687894 - 34687824
Alignment:
Q  539 ggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaactt 609  Q
    |||||||||||||  || ||||||||||||||| ||||| |||||| | |||||||||||||||| |||||    
T  34687894 ggactaacttattctaaagtgagtaacgttttggaccaacttgaaacttttaaaacataagggaccaactt 34687824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 588 - 649
Target Start/End: Original strand, 16049828 - 16049889
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaa 649  Q
    |||||||||||||||| ||||| ||| |||||||||||||||| || || ||||||||||||    
T  16049828 ttaaaacataagggaccaacttgaaaactaaaataaacataagggatcaaacatgcaattaa 16049889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 544 - 613
Target Start/End: Complemental strand, 18935188 - 18935119
Alignment:
Q  544 aacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaa 613  Q
    ||||| |||||| ||||||||| ||||||||||| |||||| | ||| |||||||||||| |||||||||    
T  18935188 aacttgtttcaaggtgagtaacattttgaaccaatttgaaacttttataacataagggaccaacttaaaa 18935119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 537 - 577
Target Start/End: Original strand, 7535524 - 7535564
Alignment:
Q  537 agggactaacttatttcaacgtgagtaacgttttgaaccaa 577  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  7535524 agggactaacttatttcaacgtgagtaacgttttggaccaa 7535564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 527 - 614
Target Start/End: Original strand, 4623333 - 4623419
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||||| ||||||||||||||||||||||||||  || |||||  ||||| |||||| | |||||||||||| ||| ||||| ||||    
T  4623333 aagtgactgaagggactaacttatttcaacgtga-aaatgtttttgaccaacttgaaacttttaaaacataagtgaccaacttgaaac 4623419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 527 - 614
Target Start/End: Complemental strand, 23871250 - 23871163
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||| ||||| |||||||||||||||||| ||||||| ||||| ||||| ||||||   |||||| || |||||| ||||| ||||    
T  23871250 aagtgatggaagtgactaacttatttcaacgcgagtaacattttggaccaacttgaaacctttaaaatatgagggaccaacttgaaac 23871163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 527 - 614
Target Start/End: Original strand, 25879815 - 25879902
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||||| ||||||||||||||||| |||  |  ||||| ||||||||||| |||||| | |||||| ||||||||| ||||| ||||    
T  25879815 aagtgacagaagggactaacttattccaatatatgtaacattttgaaccaacttgaaacttttaaaatataagggaccaacttgaaac 25879902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 534 - 609
Target Start/End: Complemental strand, 34439367 - 34439292
Alignment:
Q  534 ggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaactt 609  Q
    ||||| |||||||||||| |||||||| |||||||||| ||||| |||||  | ||||||| |||||||| |||||    
T  34439367 ggaagagactaacttattgcaacgtgaataacgttttggaccaacttgaatcttttaaaacgtaagggaccaactt 34439292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 588 - 650
Target Start/End: Complemental strand, 4623131 - 4623069
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaag 650  Q
    |||||||||||||||  || |||||| |||||||||||||||| || || |||||||||||||    
T  4623131 ttaaaacataagggatcaatttaaaaactaaaataaacataagggatcaaacatgcaattaag 4623069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 605 - 651
Target Start/End: Original strand, 32665914 - 32665960
Alignment:
Q  605 aacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    |||||||||||| ||||||||||||||||||  ||||||||||||||    
T  32665914 aacttaaaacctgaaataaacataagagaccgcacatgcaattaagc 32665960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 573 - 651
Target Start/End: Original strand, 34439559 - 34439637
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||| |||||| | ||||||||| | |||| || |||||| |||||||||||||||| || || ||||||||||||||    
T  34439559 accaacttgaaacttttaaaacatgaaggaccaatttaaaaactaaaataaacataagggatcaaacatgcaattaagc 34439637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 536 - 613
Target Start/End: Original strand, 165197 - 165274
Alignment:
Q  536 aagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaa 613  Q
    ||||||||||||||||||||||||| |||  ||||||||||| || ||| | |||||| ||||||  ||||| |||||    
T  165197 aagggactaacttatttcaacgtgaataatattttgaaccaacttaaaacttttaaaagataaggatcaaacataaaa 165274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 588 - 649
Target Start/End: Complemental strand, 18548600 - 18548539
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaa 649  Q
    ||||||||||| | || ||||||||||||||||||||||||||  | || ||||||||||||    
T  18548600 ttaaaacataaagtaccaacttaaaacctaaaataaacataaggaatcaaacatgcaattaa 18548539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 579 - 651
Target Start/End: Original strand, 4623442 - 4623514
Alignment:
Q  579 ttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    |||||| | ||||||||||| |||  ||||| ||| |||||||||||||||| || || ||||||||||||||    
T  4623442 ttgaaacttttaaaacataaaggatcaacttgaaaactaaaataaacataagggatcaaacatgcaattaagc 4623514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 579 - 650
Target Start/End: Original strand, 7645125 - 7645196
Alignment:
Q  579 ttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaag 650  Q
    |||||| | |||||| |||| |||| ||||||||| |||||||||||||||| || || |||||| ||||||    
T  7645125 ttgaaacttttaaaatataaaggactaacttaaaaactaaaataaacataagggatcaaacatgcgattaag 7645196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 588 - 651
Target Start/End: Complemental strand, 25879629 - 25879567
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||||||||| |||| ||||||||| | ||||||||||||| ||| || ||||||||||||||    
T  25879629 ttaaaacataatggaccaacttaaaaacaaaaataaacataa-agatcaaacatgcaattaagc 25879567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 588 - 651
Target Start/End: Complemental strand, 34439284 - 34439221
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||||| ||| | || ||||||||| ||||||||||||||||||| || |||| |||||||||    
T  34439284 ttaaaacctaacgaaccaacttaaaaactaaaataaacataagagatcaaacatacaattaagc 34439221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 599 - 649
Target Start/End: Original strand, 3016043 - 3016093
Alignment:
Q  599 gggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaa 649  Q
    ||||| ||||| ||||||||||||||| |||| ||||| ||||||||||||    
T  3016043 gggaccaacttgaaacctaaaataaacttaagggaccaaacatgcaattaa 3016093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 536 - 614
Target Start/End: Complemental strand, 18548681 - 18548603
Alignment:
Q  536 aagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||||||||||||||||||| ||||||| |||||| ||||| || |||   ||||||| ||||  || ||||||||||    
T  18548681 aagggactaacttatttcaacttgagtaatgttttggaccaacttaaaacctttaaaacgtaagaaaccaacttaaaac 18548603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 533 - 602
Target Start/End: Complemental strand, 7644925 - 7644856
Alignment:
Q  533 cggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataaggga 602  Q
    ||||||||||||||||||| |||  ||||||| |||| | ||||| || ||||| ||||||| |||||||    
T  7644925 cggaagggactaacttattccaatctgagtaatgtttcggaccaacttaaaatttttaaaacgtaaggga 7644856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 542 - 602
Target Start/End: Original strand, 7645059 - 7645119
Alignment:
Q  542 ctaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataaggga 602  Q
    |||||||||| ||||||||||||||||||| | ||| |||||| | ||||||  |||||||    
T  7645059 ctaacttattgcaacgtgagtaacgttttggatcaacttgaaacttttaaaatgtaaggga 7645119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 554 - 614
Target Start/End: Original strand, 18429611 - 18429671
Alignment:
Q  554 aacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||||||||||||||| ||||| || ||| | ||||||| |||||||| ||||| ||||    
T  18429611 aacgtgagtaacgttttggaccaacttaaaacttttaaaacgtaagggaccaactttaaac 18429671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 1e-24; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 499 - 649
Target Start/End: Original strand, 16642983 - 16643128
Alignment:
Q  499 tcaacccaaatctttaaatggtcaagtgaagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataa 598  Q
    |||||||||||||||||| ||||||||     |||||||| ||||||||||||||||  |||||||| ||| ||| ||| |||||| | |||||| ||||    
T  16642983 tcaacccaaatctttaaacggtcaagt-----gacggaagagactaacttatttcaatctgagtaacatttagaagcaacttgaaacttttaaaatataa 16643077  T
Q  599 gggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaa 649  Q
     |||| ||| |||||||||||||| || |||||||||| |||| |||||||    
T  16643078 aggaccaacataaaacctaaaatacacgtaagagaccaaacatacaattaa 16643128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 573 - 651
Target Start/End: Complemental strand, 19935511 - 19935433
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||| ||||||||  |||||||||| |||| ||||||||||| |||||||||||||||||||  ||||||||||||||    
T  19935511 accaacttgaaatttataaaacataatggaccaacttaaaaccaaaaataaacataagagacccaacatgcaattaagc 19935433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 540 - 614
Target Start/End: Complemental strand, 33992474 - 33992400
Alignment:
Q  540 gactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||||||||||||||||||| |||||||||||||||| |||||| | ||||||| |||||||| || |||||||    
T  33992474 gactaacttatttcaacgtgaataacgttttgaaccaacttgaaacttttaaaacgtaagggaccaatttaaaac 33992400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 573 - 649
Target Start/End: Complemental strand, 16642827 - 16642751
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaa 649  Q
    ||||| |||||||  |||||||||||||||| |||||||||||||||||||||||||| || || || |||||||||    
T  16642827 accaacttgaaatatttaaaacataagggaccaacttaaaacctaaaataaacataagggatcaaacttgcaattaa 16642751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 579 - 649
Target Start/End: Original strand, 25508146 - 25508216
Alignment:
Q  579 ttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaa 649  Q
    |||||| | |||||||||||||||  ||||||||||||||||| ||| |||| ||||| ||||||||||||    
T  25508146 ttgaaacttttaaaacataagggagcaacttaaaacctaaaatcaacttaagggaccaaacatgcaattaa 25508216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 589 - 651
Target Start/End: Complemental strand, 33992396 - 33992334
Alignment:
Q  589 taaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||||||||||||| ||||| ||| |||||||||||||||| || || ||||||||||||||    
T  33992396 taaaacataagggacgaacttgaaaactaaaataaacataagggatcaaacatgcaattaagc 33992334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 571 - 651
Target Start/End: Original strand, 33992669 - 33992749
Alignment:
Q  571 gaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||||| || ||| | ||||||||||| |||| || |||||| |||||||||||||||| || || ||||||||||||||    
T  33992669 gaaccaatttaaaacttttaaaacataaaggaccaatttaaaaactaaaataaacataagggatcaaacatgcaattaagc 33992749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 536 - 614
Target Start/End: Original strand, 33992605 - 33992683
Alignment:
Q  536 aagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||| ||||||||| |||| |||||||||||||||||||| || ||| | ||||||| ||||| || || |||||||    
T  33992605 aagggattaacttattccaacatgagtaacgttttgaaccaatttaaaacttttaaaacgtaaggaaccaatttaaaac 33992683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 582 - 649
Target Start/End: Complemental strand, 19328476 - 19328409
Alignment:
Q  582 aaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaa 649  Q
    ||||| |||||| |||| |||| ||||||||| |||||||||||||||| || ||  |||||||||||    
T  19328476 aaatttttaaaatataaaggaccaacttaaaaactaaaataaacataagggatcaatcatgcaattaa 19328409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 557 - 614
Target Start/End: Original strand, 34065283 - 34065340
Alignment:
Q  557 gtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||||||||||| |||||| || ||| | |||||| ||||||||| ||||||||||    
T  34065283 gtgagtaacgtttttaaccaactttaaacttttaaaatataagggaccaacttaaaac 34065340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 582 - 626
Target Start/End: Original strand, 32291139 - 32291183
Alignment:
Q  582 aaattgttaaaacataagggacaaacttaaaacctaaaataaaca 626  Q
    ||||| ||||||||||||| |  ||||||||||||||||||||||    
T  32291139 aaatttttaaaacataaggaattaacttaaaacctaaaataaaca 32291183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 3e-22; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 535 - 649
Target Start/End: Original strand, 1353100 - 1353214
Alignment:
Q  535 gaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagac 634  Q
    |||| ||||||||||||  ||  |||||||| ||||| ||||| |||||| | |||||||||||| ||| ||||||||||||||||||||||| ||||||    
T  1353100 gaagagactaacttattctaagatgagtaacattttggaccaacttgaaacttttaaaacataagagaccaacttaaaacctaaaataaacatgagagac 1353199  T
Q  635 cagacatgcaattaa 649  Q
    || |||| |||||||    
T  1353200 caaacatacaattaa 1353214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 527 - 651
Target Start/End: Complemental strand, 14473629 - 14473505
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaaca 626  Q
    |||||| |||||||||||||||||| |||  ||| |||| ||||| || || || ||| | |||||||||||||||| |||| ||||| |||||||||||    
T  14473629 aagtgatggaagggactaacttattccaatatgattaacattttggacaaacttaaaacttttaaaacataagggaccaactcaaaacttaaaataaaca 14473530  T
Q  627 taagagaccagacatgcaattaagc 651  Q
     ||| ||||| ||||||||||||||    
T  14473529 aaagcgaccaaacatgcaattaagc 14473505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 541 - 651
Target Start/End: Original strand, 13140566 - 13140676
Alignment:
Q  541 actaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagaca 640  Q
    |||||||||||  || ||||||||||| ||||||||| |||||| | |||||| ||||  ||| ||||||||| |||||||||||| ||| ||||| |||    
T  13140566 actaacttattataatgtgagtaacgtattgaaccaacttgaaacttttaaaatataaatgaccaacttaaaatctaaaataaacacaagggaccaaaca 13140665  T
Q  641 tgcaattaagc 651  Q
    |||||||||||    
T  13140666 tgcaattaagc 13140676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 573 - 647
Target Start/End: Original strand, 26845517 - 26845591
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaatt 647  Q
    ||||| |||||| | |||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  26845517 accaacttgaaacttttaaaacataagggaccaacttaaaacctaaaataaacataagggaccaaacatgcaatt 26845591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 529 - 614
Target Start/End: Original strand, 29526856 - 29526941
Alignment:
Q  529 gtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||| |||| |||||||||||| ||||||||||||||||||| ||||| |||||| | ||||||| |||||||| ||||||||||    
T  29526856 gtgactgaagagactaacttattccaacgtgagtaacgttttggaccaacttgaaacttttaaaacgtaagggaccaacttaaaac 29526941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 527 - 614
Target Start/End: Original strand, 44995320 - 44995407
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||||||||| |||||||||||| ||||||||||||||||||| ||||| |||| | | ||||||| |||||||| ||||| ||||    
T  44995320 aagtgacggaagagactaacttattccaacgtgagtaacgttttggaccaacttgatacttttaaaacgtaagggaccaacttgaaac 44995407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 533 - 651
Target Start/End: Complemental strand, 32622335 - 32622217
Alignment:
Q  533 cggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagag 632  Q
    ||||||| |||||||||||  |||||  ||||||||||| | ||| | |||| | |||||||||||| ||| ||||| ||| |||||||||||||||| |    
T  32622335 cggaaggaactaacttattctaacgtaggtaacgttttggatcaactggaaacttttaaaacataagagaccaacttgaaaactaaaataaacataaggg 32622236  T
Q  633 accagacatgcaattaagc 651  Q
    | || ||||||||||||||    
T  32622235 atcaaacatgcaattaagc 32622217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 535 - 616
Target Start/End: Complemental strand, 3217429 - 3217348
Alignment:
Q  535 gaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaacct 616  Q
    ||||||||||||||||| ||||||||||||||||||  ||||| |||||| | ||||||||||| |||| ||||| ||||||    
T  3217429 gaagggactaacttattccaacgtgagtaacgttttagaccaacttgaaaattttaaaacataatggaccaacttgaaacct 3217348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 527 - 614
Target Start/End: Complemental strand, 13490326 - 13490239
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||||| | ||||||||||||||| ||||||||||||||||||| ||||| || ||| | ||||||| |||| ||| ||||||||||    
T  13490326 aagtgactggagggactaacttattccaacgtgagtaacgttttggaccaacttaaaacttttaaaacgtaagagaccaacttaaaac 13490239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 535 - 651
Target Start/End: Complemental strand, 15988125 - 15988012
Alignment:
Q  535 gaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagac 634  Q
    ||||||||||||||||| ||| |||||||| | |||| ||||| ||| || | |||||||||||||||| ||||| ||||   ||||||||||||| | |    
T  15988125 gaagggactaacttattccaatgtgagtaatgatttggaccaacttggaact-ttaaaacataagggaccaacttgaaac--taaataaacataagtggc 15988029  T
Q  635 cagacatgcaattaagc 651  Q
    || ||||||||||||||    
T  15988028 caaacatgcaattaagc 15988012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 588 - 651
Target Start/End: Complemental strand, 39060370 - 39060307
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||||||| |||||| ||||||||| |||||||||||||||| || || ||||||||||||||    
T  39060370 ttaaaacattagggaccaacttaaaaactaaaataaacataagggatcaaacatgcaattaagc 39060307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 573 - 651
Target Start/End: Original strand, 43971849 - 43971927
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||| |||||| | |||||||| | | ||| ||||| |||||||||||||||||||| ||||| ||||||||||||||    
T  43971849 accaacttgaaacttttaaaacacatgtgaccaacttgaaacctaaaataaacataagggaccaaacatgcaattaagc 43971927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 529 - 614
Target Start/End: Original strand, 3221089 - 3221174
Alignment:
Q  529 gtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||| |||||||| |||||||| |||| |||||||||||||  ||||| |||||| | ||||||||||| |||| ||||| ||||    
T  3221089 gtgacagaagggacaaacttattccaacatgagtaacgttttagaccaacttgaaaattttaaaacataatggaccaacttgaaac 3221174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 530 - 614
Target Start/End: Original strand, 15988513 - 15988597
Alignment:
Q  530 tgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||| |||||||||||||||| ||| |||||||| |||||| ||||| || ||| | |||||| ||||||||| ||||| ||||    
T  15988513 tgacgaaagggactaacttattccaatgtgagtaatgttttggaccaacttaaaacttttaaaatataagggaccaacttgaaac 15988597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 534 - 602
Target Start/End: Original strand, 43513826 - 43513894
Alignment:
Q  534 ggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataaggga 602  Q
    ||||| ||||||||||||||||||||| |||| ||||||||||| ||||||   ||||||| |||||||    
T  43513826 ggaagtgactaacttatttcaacgtgaataacattttgaaccaacttgaaaacattaaaacgtaaggga 43513894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 588 - 651
Target Start/End: Complemental strand, 13490236 - 13490173
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||||||||| |||  ||||||||| ||||| ||||||||||||| ||||| |||||||||||    
T  13490236 ttaaaacataaaggatcaacttaaaaactaaagtaaacataagagatcagacctgcaattaagc 13490173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 527 - 614
Target Start/End: Complemental strand, 27956877 - 27956790
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||| ||||||  ||||||||||| ||||||| |||| |||||| ||||| |||||| | ||||||| |||||||| || |||||||    
T  27956877 aagtgtcggaagaaactaacttattccaacgtgggtaatgttttggaccaacttgaaacttttaaaacgtaagggaccaatttaaaac 27956790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 605 - 651
Target Start/End: Complemental strand, 6412510 - 6412464
Alignment:
Q  605 aacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    |||||||||||| ||||||||||||||||||  ||||||||||||||    
T  6412510 aacttaaaacctgaaataaacataagagaccgcacatgcaattaagc 6412464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 588 - 649
Target Start/End: Original strand, 6795522 - 6795583
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaa 649  Q
    ||||||||||| |||| |||||||||||||||||||| ||| | || || ||||||||||||    
T  6795522 ttaaaacataatggaccaacttaaaacctaaaataaatataggggatcaaacatgcaattaa 6795583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 529 - 614
Target Start/End: Original strand, 13525241 - 13525326
Alignment:
Q  529 gtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||||||| || ||||| |||  || |||| |||||||||  ||||| ||||| || |||||||||||| ||||||||||||||    
T  13525241 gtgacggaagagattaactaattgaaatgtgaataacgttttagaccaacttgaattttttaaaacataagagacaaacttaaaac 13525326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 533 - 614
Target Start/End: Original strand, 14473796 - 14473877
Alignment:
Q  533 cggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||||||||||||||||| |||  |||||||||||||| ||||| |||||| | | |||||| |||  || ||||||||||    
T  14473796 cggaagggactaacttattccaaaatgagtaacgttttggaccaacttgaaactctcaaaacaaaagacaccaacttaaaac 14473877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 588 - 649
Target Start/End: Original strand, 32622539 - 32622600
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaa 649  Q
    ||||||||| | |||| ||||||||| |||||||||||||||| || || ||||||||||||    
T  32622539 ttaaaacatgaaggaccaacttaaaaactaaaataaacataagggatcaaacatgcaattaa 32622600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 534 - 614
Target Start/End: Complemental strand, 24015956 - 24015876
Alignment:
Q  534 ggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||| |||||||||||||||| || ||||| |||||| |||||  ||||||| | ||||| ||| |||| ||||||||||    
T  24015956 ggaagagactaacttatttcaatgtcagtaatgttttggaccaacatgaaattttcaaaacgtaaaggaccaacttaaaac 24015876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 535 - 614
Target Start/End: Original strand, 43971781 - 43971861
Alignment:
Q  535 gaagggactaacttatttc-aacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||  ||||| | ||||||||  |||||| ||||| ||||    
T  43971781 gaagggactaacttatttctaacgtgagtaacaatttgaaccaacatgaaacttttaaaacactagggaccaacttgaaac 43971861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 588 - 651
Target Start/End: Complemental strand, 3217347 - 3217284
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    |||||||||||||||| ||| | |||||||| ||| ||| ||| ||||| ||||||||||||||    
T  3217347 ttaaaacataagggaccaacatgaaacctaagatatacacaagggaccaaacatgcaattaagc 3217284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 588 - 651
Target Start/End: Complemental strand, 13140352 - 13140289
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    |||||||||||  ||| ||||||||||||||||||||||||||  | || |||||||| |||||    
T  13140352 ttaaaacataaaagaccaacttaaaacctaaaataaacataaggcatcaaacatgcaagtaagc 13140289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 14424289 - 14424238
Alignment:
Q  600 ggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    |||| ||||| |||||||||||||||||||||| | | ||||||||||||||    
T  14424289 ggaccaacttgaaacctaaaataaacataagaggctaaacatgcaattaagc 14424238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 527 - 614
Target Start/End: Original strand, 24284060 - 24284147
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||||||||||| |||||||||||| ||  ||||||| ||||||   ||| |||||| | |||||| ||||| | ||||||||||||    
T  24284060 aagtgacggaaggaactaacttattttaagatgagtaatgttttgggtcaacttgaaacttttaaaatataagagtcaaacttaaaac 24284147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 597 - 651
Target Start/End: Complemental strand, 1352885 - 1352831
Alignment:
Q  597 aagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||||| || |||||||||||||||||||||||  | || ||||||||||||||    
T  1352885 aagggaccaatttaaaacctaaaataaacataaggaatcaaacatgcaattaagc 1352831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 579 - 653
Target Start/End: Complemental strand, 24065944 - 24065870
Alignment:
Q  579 ttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagctt 653  Q
    |||||| | |||||||||||||||| || || |||||| ||||||||| ||| || || |||| |||||||||||    
T  24065944 ttgaaacttttaaaacataagggaccaaattgaaacctcaaataaacacaagggatcaaacattcaattaagctt 24065870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 573 - 643
Target Start/End: Original strand, 27957056 - 27957126
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgc 643  Q
    |||||||| ||| | |||||| ||||| |||  |||| ||||||||||||||||||||||| || ||||||    
T  27957056 accaagttaaaacttttaaaatataagagacctacttgaaacctaaaataaacataagagatcaaacatgc 27957126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 536 - 613
Target Start/End: Complemental strand, 1352975 - 1352898
Alignment:
Q  536 aagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaa 613  Q
    ||||||||||||||||||||||||| |||| ||||  ||||| || ||| | ||||||  |||| ||| |||||||||    
T  1352975 aagggactaacttatttcaacgtgaataacattttagaccaacttaaaacttttaaaatgtaagagaccaacttaaaa 1352898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 534 - 614
Target Start/End: Original strand, 26845448 - 26845529
Alignment:
Q  534 ggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgtt-aaaacataagggacaaacttaaaac 614  Q
    ||||||| ||||||| ||  || |||||||||||||||||||||  ||||| |||| ||||||||| |||| ||||| ||||    
T  26845448 ggaaggggctaacttgttctaatgtgagtaacgttttgaaccaacatgaaactgttaaaaacataaaggaccaacttgaaac 26845529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 588 - 653
Target Start/End: Original strand, 29526944 - 29527009
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagctt 653  Q
    ||||||||||| |||| |||||||||  ||||||||||||||| ||  | |||| |||||||||||    
T  29526944 ttaaaacataatggaccaacttaaaaattaaaataaacataagggattaaacatacaattaagctt 29527009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 1e-21; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 527 - 651
Target Start/End: Original strand, 29675130 - 29675255
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaat-tgttaaaacataagggacaaacttaaaacctaaaataaac 625  Q
    ||||||||||||| ||||||||||| ||| |||| ||||||| |||||||| || |||| | ||||||||| || ||| |||||||||||||||||||||    
T  29675130 aagtgacggaaggaactaacttattccaatgtgaataacgttctgaaccaacttaaaatcttttaaaacatgagagaccaacttaaaacctaaaataaac 29675229  T
Q  626 ataagagaccagacatgcaattaagc 651  Q
    ||||   |||| |||| |||||||||    
T  29675230 ataaagcaccaaacatacaattaagc 29675255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 536 - 649
Target Start/End: Original strand, 22793566 - 22793679
Alignment:
Q  536 aagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagacc 635  Q
    ||||| |||||||||| |||  |||||||| ||||| || || |||||| | ||||||| |||||||| ||||| |||||||||||||||||||| || |    
T  22793566 aaggggctaacttattccaatatgagtaacattttggacaaacttgaaacttttaaaacgtaagggaccaacttgaaacctaaaataaacataagggatc 22793665  T
Q  636 agacatgcaattaa 649  Q
    | ||||||||||||    
T  22793666 aaacatgcaattaa 22793679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 535 - 614
Target Start/End: Complemental strand, 10567607 - 10567528
Alignment:
Q  535 gaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||| | ||||||| |||||||| ||||| ||||    
T  10567607 gaagagactaacttatttcaatgtgagtaacgttttgaaccaacttgaaacttttaaaacgtaagggaccaacttgaaac 10567528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 527 - 614
Target Start/End: Original strand, 10567722 - 10567809
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||||||||| |||||||||||| |||||||||||| |||||| ||||| |||||| | ||||||| |||||||| ||||| ||||    
T  10567722 aagtgacggaagagactaacttattccaacgtgagtaatgttttggaccaacttgaaacttttaaaacgtaagggaccaacttgaaac 10567809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 588 - 650
Target Start/End: Original strand, 34829906 - 34829968
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaag 650  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||| || |||||||||||||    
T  34829906 ttaaaacataagagaccaacttaaaacctaaaataaacataagagatcaaacatgcaattaag 34829968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 534 - 651
Target Start/End: Complemental strand, 28613311 - 28613194
Alignment:
Q  534 ggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagaga 633  Q
    ||||| |||||||||||| |||  |||||||||||||| ||||| ||  || | ||||||| |||||||| ||||||||| |||||||||| ||||| ||    
T  28613311 ggaagagactaacttattccaatatgagtaacgttttggaccaacttacaacttttaaaacgtaagggaccaacttaaaaactaaaataaatataaggga 28613212  T
Q  634 ccagacatgcaattaagc 651  Q
     || |||||||| |||||    
T  28613211 tcaaacatgcaactaagc 28613194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 579 - 651
Target Start/End: Original strand, 28705851 - 28705923
Alignment:
Q  579 ttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    |||||| | |||||||| ||||||| |||||||||| ||||||||||||||||||| ||| ||||||||||||    
T  28705851 ttgaaagttttaaaacaaaagggaccaacttaaaacttaaaataaacataagagactagatatgcaattaagc 28705923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 530 - 614
Target Start/End: Original strand, 32629314 - 32629398
Alignment:
Q  530 tgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||||||| |||||||||||| ||| ||| |||||||||||||| || |||||||| |||||| ||||||||| |||| |||||    
T  32629314 tgacggaagagactaacttattacaatgtgggtaacgttttgaacgaacttgaaatttttaaaatataagggaccaactcaaaac 32629398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 573 - 651
Target Start/End: Complemental strand, 17342965 - 17342887
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||| |||||||| |||||||||||||||| ||||| |||||||||||||||||| | ||  | ||||||||||||||    
T  17342965 accaacttgaaatttttaaaacataagggaccaacttgaaacctaaaataaacatacgggattaaacatgcaattaagc 17342887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 540 - 629
Target Start/End: Complemental strand, 34829691 - 34829602
Alignment:
Q  540 gactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataa 629  Q
    |||||||||||| ||| |||||||| || |||||| || |||||| | ||||||||||||  || |||||||||| ||||||||||||||    
T  34829691 gactaacttattccaatgtgagtaatgtattgaactaacttgaaacttttaaaacataagtaaccaacttaaaacttaaaataaacataa 34829602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 539 - 647
Target Start/End: Complemental strand, 6273728 - 6273620
Alignment:
Q  539 ggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccaga 638  Q
    |||||||||||||| || ||||||||||||||| ||||| || |||   ||||||||||| | || ||||| |||| |||||||||||||| |||  | |    
T  6273728 ggactaacttattttaatgtgagtaacgttttggaccaacttaaaacgtttaaaacataaagaaccaacttgaaacgtaaaataaacataatagattaaa 6273629  T
Q  639 catgcaatt 647  Q
    |||||||||    
T  6273628 catgcaatt 6273620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 573 - 651
Target Start/End: Original strand, 6611973 - 6612051
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||| |||||| | |||||||| ||||||  ||||||||| ||||||||||||||||| | || ||||||||||||||    
T  6611973 accaacttgaaacttttaaaacacaagggatcaacttaaaatctaaaataaacataagacatcaaacatgcaattaagc 6612051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 573 - 651
Target Start/End: Complemental strand, 22793378 - 22793300
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||| |||||| | |||||||||||||||| ||||| |||||||||||||||||||| | ||| | || |||||||||    
T  22793378 accaacttgaaacttttaaaacataagggaccaacttgaaacctaaaataaacataaggggccaaatatccaattaagc 22793300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 573 - 649
Target Start/End: Complemental strand, 32629140 - 32629064
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaa 649  Q
    ||||| || ||||| ||||||||||| || | |||||||||||||||||||||||||| || || ||||| ||||||    
T  32629140 accaacttaaaatttttaaaacataaaggtctaacttaaaacctaaaataaacataagggatcaaacatgtaattaa 32629064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 535 - 614
Target Start/End: Complemental strand, 6611755 - 6611676
Alignment:
Q  535 gaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||||||||||||||| |||   ||| ||||||||||||||| |||||| | ||||||||| |||||| ||||| ||||    
T  6611755 gaagggactaacttattccaattagagcaacgttttgaaccaacttgaaacttttaaaacatgagggaccaacttgaaac 6611676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 588 - 634
Target Start/End: Original strand, 6210300 - 6210346
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagac 634  Q
    ||||||||||||| || ||||||||| ||||||||||||||||||||    
T  6210300 ttaaaacataaggcaccaacttaaaatctaaaataaacataagagac 6210346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 544 - 613
Target Start/End: Complemental strand, 32629198 - 32629129
Alignment:
Q  544 aacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaa 613  Q
    |||||||||||||||||||||||||||| || || ||||||   ||||||  |||||||| |||||||||    
T  32629198 aacttatttcaacgtgagtaacgttttggactaacttgaaacctttaaaatgtaagggaccaacttaaaa 32629129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 534 - 603
Target Start/End: Original strand, 34829823 - 34829892
Alignment:
Q  534 ggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggac 603  Q
    |||| |||||||||||||||||  || ||||||||||||||||| ||||||   ||||||| ||||||||    
T  34829823 ggaaaggactaacttatttcaatatgggtaacgttttgaaccaacttgaaacctttaaaacgtaagggac 34829892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 534 - 614
Target Start/End: Complemental strand, 29675022 - 29674942
Alignment:
Q  534 ggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||||||||| ||||| |||||||||| | |||||| | ||| |||||| | ||||||| |||||||| ||||| ||||    
T  29675022 ggaagggactaatttattccaacgtgagtcatgttttggatcaacttgaaacttttaaaacttaagggaccaacttgaaac 29674942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 588 - 651
Target Start/End: Original strand, 11122251 - 11122314
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    |||||||||||  ||| |||||| ||||||||||||||||||| || || |||| |||||||||    
T  11122251 ttaaaacataaatgaccaacttacaacctaaaataaacataagggatcaaacatacaattaagc 11122314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 625
Target Start/End: Complemental strand, 6611688 - 6611636
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaac 625  Q
    ||||| |||||| | |||||||||||||||| ||| | |||||||||||||||    
T  6611688 accaacttgaaacttttaaaacataagggaccaacctgaaacctaaaataaac 6611636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 17343025 - 17342973
Alignment:
Q  542 ctaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaac 594  Q
    ||||||||||| || ||||||||||||||| ||||| |||||| | |||||||    
T  17343025 ctaacttattttaaggtgagtaacgttttggaccaatttgaaacttttaaaac 17342973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 534 - 570
Target Start/End: Complemental strand, 19279104 - 19279068
Alignment:
Q  534 ggaagggactaacttatttcaacgtgagtaacgtttt 570  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  19279104 ggaacggactaacttattccaacgtgagtaacgtttt 19279068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 544 - 600
Target Start/End: Original strand, 28705759 - 28705815
Alignment:
Q  544 aacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagg 600  Q
    |||||||||||| ||| ||||| ||||||||| | |||||| | |||||||||||||    
T  28705759 aacttatttcaaggtgggtaacattttgaacctatttgaaacttttaaaacataagg 28705815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 2e-20; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 527 - 614
Target Start/End: Complemental strand, 54341355 - 54341268
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||||||||| |||| ||||||| ||||||||||||||||||| ||||| |||||| | ||||||| |||||||| ||||||||||    
T  54341355 aagtgacggaagagactgacttattccaacgtgagtaacgttttggaccaacttgaaacttttaaaacgtaagggaccaacttaaaac 54341268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 533 - 614
Target Start/End: Complemental strand, 33419686 - 33419605
Alignment:
Q  533 cggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||| |||||||||||||||| ||||||||||||||| ||||| |||||| | ||||||| |||||||| ||||||||||    
T  33419686 cggaagagactaacttatttcaatgtgagtaacgttttggaccaacttgaaacttttaaaacgtaagggaccaacttaaaac 33419605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 527 - 598
Target Start/End: Original strand, 37285809 - 37285879
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataa 598  Q
    |||||||||| || ||||||||||||||| ||||||||||||||||||||| |||||||| |||||| ||||    
T  37285809 aagtgacgga-ggcactaacttatttcaatgtgagtaacgttttgaaccaacttgaaatttttaaaatataa 37285879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 543 - 614
Target Start/End: Complemental strand, 48618616 - 48618545
Alignment:
Q  543 taacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||||||  || ||||||||||||||||||||| |||||||||||||||||||||| || || |||||||    
T  48618616 taacttattctaatgtgagtaacgttttgaaccaacttgaaattgttaaaacataaggaaccaatttaaaac 48618545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 527 - 599
Target Start/End: Original strand, 30547992 - 30548064
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataag 599  Q
    ||||||| ||| |||||||||||||||||| |||||||||||||| ||||| |||||| | ||||||| ||||    
T  30547992 aagtgactgaatggactaacttatttcaacatgagtaacgttttggaccaacttgaaacttttaaaacgtaag 30548064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 579 - 651
Target Start/End: Original strand, 33419883 - 33419955
Alignment:
Q  579 ttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    |||||| | |||||||||||||||| |||||||||  ||||||||||||||| || || ||||||||||||||    
T  33419883 ttgaaacttttaaaacataagggaccaacttaaaaagtaaaataaacataagggatcaaacatgcaattaagc 33419955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 534 - 646
Target Start/End: Original strand, 39639825 - 39639937
Alignment:
Q  534 ggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagaga 633  Q
    ||||||||||||||||||  | | |||||||| ||||| | ||| ||| || | |||||| ||||||||| ||||||||||||||||| || | ||||||    
T  39639825 ggaagggactaacttattatatcatgagtaacattttggatcaatttgtaacttttaaaatataagggaccaacttaaaacctaaaatgaataaaagaga 39639924  T
Q  634 ccagacatgcaat 646  Q
    | | |||||||||    
T  39639925 cgaaacatgcaat 39639937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 614
Target Start/End: Complemental strand, 19540962 - 19540889
Alignment:
Q  541 actaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||||||||  || ||||||||||||||||||||| || ||| ||||||||||||| |||| ||| ||||||    
T  19540962 actaacttattctaatgtgagtaacgttttgaaccaatttaaaactgttaaaacataaaggaccaacataaaac 19540889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 614
Target Start/End: Original strand, 51388033 - 51388106
Alignment:
Q  541 actaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||||||||||||||||||||||||||||| ||||| || ||| | ||||||  |||||||  ||||||||||    
T  51388033 actaacttatttcaacgtgagtaacgttttggaccaatttaaaacttttaaaatgtaagggatcaacttaaaac 51388106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 650
Target Start/End: Complemental strand, 33241925 - 33241846
Alignment:
Q  571 gaaccaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaag 650  Q
    ||||||| || ||| | |||||||||||||||  ||||| ||||||||||||||| |||| |||||  ||||||||||||    
T  33241925 gaaccaaattaaaacttttaaaacataagggaacaacttgaaacctaaaataaacttaagggaccaaccatgcaattaag 33241846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 579 - 650
Target Start/End: Original strand, 37285889 - 37285960
Alignment:
Q  579 ttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaag 650  Q
    |||||| | |||||| ||||||||| |||||||||||||||||||||||| |  || | |||||||||||||    
T  37285889 ttgaaacttttaaaatataagggaccaacttaaaacctaaaataaacatagggaactaaacatgcaattaag 37285960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 589 - 651
Target Start/End: Original strand, 19541185 - 19541247
Alignment:
Q  589 taaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||||||||  ||| ||||||||||| ||||||||||||||| | || ||||||||||||||    
T  19541185 taaaacataaaagactaacttaaaaccaaaaataaacataagatatcaaacatgcaattaagc 19541247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 588 - 623
Target Start/End: Complemental strand, 19540886 - 19540851
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataa 623  Q
    |||||||||||||||| |||||||||||||||||||    
T  19540886 ttaaaacataagggaccaacttaaaacctaaaataa 19540851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 588 - 630
Target Start/End: Original strand, 51388109 - 51388151
Alignment:
Q  588 ttaaaacataagggacaaacttaaaacctaaaataaacataag 630  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||    
T  51388109 ttaaaacataagagaccaacttaaaaactaaaataaacataag 51388151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 527 - 603
Target Start/End: Original strand, 33419802 - 33419878
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggac 603  Q
    ||||||| |||| |||||| ||||| ||||||||||||||||||   |||| || ||| | ||||||| ||||||||    
T  33419802 aagtgactgaagagactaatttattccaacgtgagtaacgttttagtccaacttaaaacttttaaaacgtaagggac 33419878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 591 - 651
Target Start/End: Original strand, 48618835 - 48618895
Alignment:
Q  591 aaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||||||| ||| ||||| || ||||||||||| ||||| || || ||||||||||||||    
T  48618835 aaacataagagaccaacttgaagcctaaaataaatataagggatcaaacatgcaattaagc 48618895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 579 - 651
Target Start/End: Original strand, 54341438 - 54341510
Alignment:
Q  579 ttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    |||||| | ||||||  |||||||| |||| ||||  |||||||||||||||||| || |||| |||||||||    
T  54341438 ttgaaacttttaaaatctaagggaccaactcaaaaattaaaataaacataagagatcaaacatacaattaagc 54341510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 579 - 651
Target Start/End: Original strand, 9914 - 9986
Alignment:
Q  579 ttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    |||||| | |||||||||||| ||| ||||||||||||||||||||||||||||| || ||||||||||||||    
T  9914 ttgaaacttttaaaacataagagaccaacttaaaacctaaaataaacataagagatcaaacatgcaattaagc 9986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 573 - 651
Target Start/End: Complemental strand, 9656 - 9578
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||| |||||| | |||||||||||||||| | |||||||  |||||||||||||||||| || ||||| ||||||||    
T  9656 accaatttgaaacttttaaaacataagggaccatcttaaaaattaaaataaacataagagatcaaacatggaattaagc 9578  T

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Target: scaffold0365 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 579 - 651
Target Start/End: Original strand, 10557 - 10629
Alignment:
Q  579 ttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    |||||| | |||||||||||| ||| ||||||||||||||||||||||||||||| || ||||||||||||||    
T  10557 ttgaaacttttaaaacataagagaccaacttaaaacctaaaataaacataagagatcaaacatgcaattaagc 10629  T

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Target: scaffold0365; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 573 - 651
Target Start/End: Complemental strand, 10299 - 10221
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||| |||||| | |||||||||||||||| | |||||||  |||||||||||||||||| || ||||| ||||||||    
T  10299 accaatttgaaacttttaaaacataagggaccatcttaaaaattaaaataaacataagagatcaaacatggaattaagc 10221  T

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Target: scaffold0015 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 579 - 651
Target Start/End: Original strand, 47417 - 47489
Alignment:
Q  579 ttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    |||||| | |||||||||||| ||| |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  47417 ttgaaacttttaaaacataagcgaccaacttaaaacctaaaataaacataagggaccaaacatgcaattaagc 47489  T

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Target: scaffold0015; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 649
Target Start/End: Complemental strand, 47346 - 47291
Alignment:
Q  594 cataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaa 649  Q
    |||||||||| ||||| ||| ||||||||||||| ||||| || ||||||||||||    
T  47346 cataagggaccaacttgaaatctaaaataaacattagagatcaaacatgcaattaa 47291  T

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Target: scaffold0548 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0548
Description:

Target: scaffold0548; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 527 - 614
Target Start/End: Original strand, 3292 - 3379
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||||| | ||||||| |||||||| ||||| ||||    
T  3292 aagtgacagaagggactaacttattccaaagtgagtaacgttttggaccaacttgaaacttttaaaacgtaagggaccaacttgaaac 3379  T

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Target: scaffold0548; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 573 - 651
Target Start/End: Original strand, 3367 - 3445
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||| |||||| | |||||||||||||||| ||||| ||| |||||||||||||||| || || ||||||||||||||    
T  3367 accaacttgaaacttttaaaacataagggaccaacttgaaaactaaaataaacataagggatcaaacatgcaattaagc 3445  T

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Target: scaffold0056 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 527 - 614
Target Start/End: Original strand, 62984 - 63071
Alignment:
Q  527 aagtgacggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataagggacaaacttaaaac 614  Q
    |||||||||||| |||||||||||| ||| ||||||||||||||| |||||  ||||| | ||||||  |||||||| ||||| ||||    
T  62984 aagtgacggaagagactaacttattccaaagtgagtaacgttttggaccaacctgaaacttttaaaatgtaagggaccaacttgaaac 63071  T

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Target: scaffold0056; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 534 - 602
Target Start/End: Complemental strand, 62871 - 62803
Alignment:
Q  534 ggaagggactaacttatttcaacgtgagtaacgttttgaaccaagttgaaattgttaaaacataaggga 602  Q
    ||||| |||||||||||| ||||||||||||||||||| ||||| || ||| | ||||||| |||||||    
T  62871 ggaagagactaacttattccaacgtgagtaacgttttggaccaacttaaaacttttaaaacgtaaggga 62803  T

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Target: scaffold0056; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 573 - 651
Target Start/End: Original strand, 63059 - 63137
Alignment:
Q  573 accaagttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    ||||| |||||| | ||||||||| | |||| || |||||| |||||||||||||||| || || ||||||||||||||    
T  63059 accaacttgaaacttttaaaacatgaaggaccaatttaaaaactaaaataaacataagggatcaaacatgcaattaagc 63137  T

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Target: scaffold0045 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 579 - 651
Target Start/End: Complemental strand, 29681 - 29609
Alignment:
Q  579 ttgaaattgttaaaacataagggacaaacttaaaacctaaaataaacataagagaccagacatgcaattaagc 651  Q
    |||||||| ||||||| |||| ||  ||||| ||| ||||||||||||||||||| || ||||| ||||||||    
T  29681 ttgaaatttttaaaacgtaagagatcaacttgaaaactaaaataaacataagagatcaaacatgtaattaagc 29609  T

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Target: scaffold1484 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold1484
Description:

Target: scaffold1484; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 171 - 226
Alignment:
Q  389 tgcatatgcacttgtttgttattaatgagcttgctttttcttgaaatttatcagtc 444  Q
    ||||||||||||||||| ||||||||||  ||||||| ||||||| |||| |||||    
T  171 tgcatatgcacttgtttattattaatgaatttgctttgtcttgaattttaccagtc 226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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