View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13281_low_10 (Length: 368)
Name: NF13281_low_10
Description: NF13281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13281_low_10 |
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Alignment Details
Target: chr6 (Bit Score: 334; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 9 - 350
Target Start/End: Original strand, 35170817 - 35171158
Alignment:
| Q |
9 |
cattatactaccgagccttcagaaactgggtcctccttaaaaggtttacctttgctctctttttgaattttgatatcaatattacttttggtttgaataa |
108 |
Q |
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| T |
35170817 |
cattatactaccgagccttcggaaactgggtcctccttaaaaggtttacctttgctctctttttgaattttgatatcaatattacttttggtttgaataa |
35170916 |
T |
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| Q |
109 |
ggatatatacatatgatagtattatacgtcctaattagatagtattcttgtttatattcatcttaattaaccttgagcacatggctaaaatagtaatatg |
208 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35170917 |
ggatatatacatatggtagtattatacgtcctaattagatagtattcttgtttatattcatcttaattaaccttgagcacatggctaaaatagtaatatg |
35171016 |
T |
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| Q |
209 |
ctaatatcatcatctgttaggatgaatttgtgacaaaactttctaattgctattcttttatttattggcatggttttaagttgttatgctttctgcagaa |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35171017 |
ctaatatcatcatctgttaggatgaatttgtgacaaaactttctaattgctattcttttatttattggcatggttttaagttgttatgctttctgcagaa |
35171116 |
T |
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| Q |
309 |
aatatctgcggaggtgactctgtcgatctcagtagtactact |
350 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
35171117 |
aatatctgcggaggtgactctgtcgatctcagtagtactact |
35171158 |
T |
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